Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8057M16.3 |
| Conread position: | 332-527 |
| Cow position: | chr14:10935628-10935827 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 14, 117 |
| Conread position: | 370-539 |
| Cow position: | chr14:45849178-45849351 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 371-478 |
| Cow position: | chr14:8766740-8766633 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 88 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 372-484 |
| Cow position: | chr14:31399631-31399518 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 99 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 372-493 |
| Cow position: | chr14:46962585-46962464 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 372-500 |
| Cow position: | chr14:45515539-45515668 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 372-507 |
| Cow position: | chr14:21084380-21084240 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 372-522 |
| Cow position: | chr14:23107363-23107206 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 372-526 |
| Cow position: | chr14:34256885-34257039 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 106, 57 |
| Conread position: | 372-527 |
| Cow position: | chr14:6583036-6582880 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 104, 143 |
| Conread position: | 372-528 |
| Cow position: | chr14:37624734-37624892 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 107, 153 |
| Conread position: | 372-529 |
| Cow position: | chr14:13928087-13928248 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 372-529 |
| Cow position: | chr14:27104118-27103960 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 372-530 |
| Cow position: | chr14:20865281-20865434 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 138, 34 |
| Conread position: | 372-531 |
| Cow position: | chr14:12559442-12559603 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 29, 83 |
| Conread position: | 372-532 |
| Cow position: | chr14:2189672-2189508 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 29, 83 |
| Conread position: | 372-532 |
| Cow position: | chr14:7582414-7582570 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 372-532 |
| Cow position: | chr14:7647979-7648147 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 372-532 |
| Cow position: | chr14:7813533-7813694 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 104, 83 |
| Conread position: | 372-532 |
| Cow position: | chr14:8488224-8488069 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 106, 66 |
| Conread position: | 372-532 |
| Cow position: | chr14:19022859-19023024 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 28, 124 |
| Conread position: | 372-532 |
| Cow position: | chr14:23008217-23008062 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 104, 129 |
| Conread position: | 372-532 |
| Cow position: | chr14:26108672-26108506 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 31, 127 |
| Conread position: | 372-532 |
| Cow position: | chr14:26153230-26153396 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 372-532 |
| Cow position: | chr14:26448787-26448635 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 372-532 |
| Cow position: | chr14:26960380-26960541 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 30, 143 |
| Conread position: | 372-532 |
| Cow position: | chr14:28565509-28565349 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 104, 154 |
| Conread position: | 372-532 |
| Cow position: | chr14:28605272-28605105 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 372-532 |
| Cow position: | chr14:47519713-47519879 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 23, 85 |
| Conread position: | 372-532 |
| Cow position: | chr14:49049108-49049269 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 116, 96 |
| Conread position: | 372-536 |
| Cow position: | chr14:47551238-47551405 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 29, 87 |
| Conread position: | 372-542 |
| Cow position: | chr14:21018149-21017977 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 372-542 |
| Cow position: | chr14:47974019-47973847 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 104, 31 |
| Conread position: | 372-550 |
| Cow position: | chr14:47138752-47138935 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 372-551 |
| Cow position: | chr14:6441948-6441759 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 372-552 |
| Cow position: | chr14:36080879-36081063 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 373-532 |
| Cow position: | chr14:35700463-35700301 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 373-552 |
| Cow position: | chr14:37678965-37679150 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 374-532 |
| Cow position: | chr14:29860904-29860750 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 105, 36 |
| Conread position: | 375-500 |
| Cow position: | chr14:22657280-22657156 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 375-527 |
| Cow position: | chr14:20045587-20045429 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 22, 132 |
| Conread position: | 375-531 |
| Cow position: | chr14:20795809-20795651 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 26, 140 |
| Conread position: | 375-531 |
| Cow position: | chr14:47693731-47693572 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 24, 79 |
| Conread position: | 375-532 |
| Cow position: | chr14:6984929-6985080 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 100, 68 |
| Conread position: | 375-534 |
| Cow position: | chr14:21369400-21369239 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 101, 41 |
| Conread position: | 376-530 |
| Cow position: | chr14:20701784-20701942 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 376-532 |
| Cow position: | chr14:43031832-43031669 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 378-532 |
| Cow position: | chr14:38688204-38688360 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 47 |
| Conread position: | 381-524 |
| Cow position: | chr14:18093825-18093960 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 129, 10 |
| Conread position: | 381-532 |
| Cow position: | chr14:37333725-37333573 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 128, 101 |
| Conread position: | 387-532 |
| Cow position: | chr14:8875028-8875171 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 92, 124 |
| Conread position: | 388-507 |
| Cow position: | chr14:10936301-10936182 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 55, 113 |
| Conread position: | 388-523 |
| Cow position: | chr14:16969075-16969210 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 63, 69 |
| Conread position: | 388-529 |
| Cow position: | chr14:20284174-20284029 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 393-533 |
| Cow position: | chr14:29481370-29481512 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 83, 11 |
| Conread position: | 394-494 |
| Cow position: | chr14:28327110-28327210 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 83 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 394-521 |
| Cow position: | chr14:6582855-6582722 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 394-550 |
| Cow position: | chr14:28565312-28565158 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 131, 62 |
| Conread position: | 396-532 |
| Cow position: | chr14:8517977-8518110 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 114, 93 |
| Conread position: | 396-533 |
| Cow position: | chr14:43565867-43566007 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 397-532 |
| Cow position: | chr14:5677370-5677236 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 82, 54 |
| Conread position: | 398-528 |
| Cow position: | chr14:10114973-10114844 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 78, 53 |
| Conread position: | 406-532 |
| Cow position: | chr14:15039932-15040054 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 422-530 |
| Cow position: | chr14:24625968-24626079 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 425-532 |
| Cow position: | chr14:18238144-18238039 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 51, 88 |
| Conread position: | 447-534 |
| Cow position: | chr14:12488647-12488735 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 77 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
Show alignments to all cow chromosomes.