Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8057M16.3
        

               Conread position:
               327-533
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               161
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               149, 12
               

               Conread position:
               360-508
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               360-529
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               365-531
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               368-521
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               368-531
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               111, 37
               

               Conread position:
               372-465
               

               Cow position:
               
               

               Alignm length:
               94
               

               Alignm identity:
               79
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               372-478
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               372-488
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               25, 87
               

               Conread position:
               372-498
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               372-500
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               107, 79
               

               Conread position:
               372-502
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               372-510
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               104, 14
               

               Conread position:
               372-511
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               107, 25
               

               Conread position:
               372-513
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               372-520
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               104, 54
               

               Conread position:
               372-526
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               372-527
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               40, 48
               

               Conread position:
               372-530
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               102, 79
               

               Conread position:
               372-530
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               372-530
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               29, 101
               

               Conread position:
               372-531
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               372-532
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               22, 124
               

               Conread position:
               372-532
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               372-532
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               372-532
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               109, 71
               

               Conread position:
               372-532
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               104, 79
               

               Conread position:
               372-532
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               104, 129
               

               Conread position:
               372-532
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               106, 21
               

               Conread position:
               372-532
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               372-532
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               107, 81
               

               Conread position:
               372-532
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               29, 48
               

               Conread position:
               372-532
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               372-542
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               135, 50
               

               Conread position:
               372-544
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               29, 173
               

               Conread position:
               372-546
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               372-546
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               144
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               104, 141
               

               Conread position:
               372-546
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               28, 63
               

               Conread position:
               372-548
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               372-552
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               104, 79
               

               Conread position:
               373-521
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               88, 16
               

               Conread position:
               373-527
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               106, 5
               

               Conread position:
               373-531
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               24, 143
               

               Conread position:
               373-532
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               373-532
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               23, 82
               

               Conread position:
               374-532
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               102, 39
               

               Conread position:
               375-529
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               107, 23
               

               Conread position:
               375-532
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               103, 125
               

               Conread position:
               375-532
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               105, 77
               

               Conread position:
               376-531
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               16, 105
               

               Conread position:
               377-532
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               23, 62
               

               Conread position:
               380-511
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               17, 37
               

               Conread position:
               381-532
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               20, 41
               

               Conread position:
               391-523
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               6, 63
               

               Conread position:
               393-532
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               393-532
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               90, 61
               

               Conread position:
               394-526
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               5, 35
               

               Conread position:
               394-528
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               90, 53
               

               Conread position:
               394-532
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               82, 98
               

               Conread position:
               394-532
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               116, 38
               

               Conread position:
               394-532
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               82, 113
               

               Conread position:
               398-531
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               399-534
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               403-526
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               73, 100
               

               Conread position:
               404-533
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               405-532
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               405-532
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               415-527
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               54, 100
               

               Conread position:
               417-532
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               425-532
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               7, 0
               
Show alignments to all cow chromosomes.