Cow genome map

Conread name: Ss1.1-Pig4-TMW8057M16.3

Conread position: 360-504
Cow position: chr18:23424879-23425025 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 360-542
Cow position: chr18:21706223-21706039 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 13, 170

Conread position: 367-509
Cow position: chr18:39211045-39210902 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 109, 0

Conread position: 368-534
Cow position: chr18:15689251-15689420 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 32, 148

Conread position: 369-506
Cow position: chr18:4803399-4803263 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 107, 0

Conread position: 369-532
Cow position: chr18:35767140-35767305 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 54, 34

Conread position: 369-534
Cow position: chr18:51587577-51587409 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 111

Conread position: 369-537
Cow position: chr18:44400417-44400588 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 112, 0

Conread position: 371-532
Cow position: chr18:26372889-26373057 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 372-478
Cow position: chr18:3780406-3780512 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 372-478
Cow position: chr18:19850751-19850646 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 372-478
Cow position: chr18:32517379-32517273 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 372-505
Cow position: chr18:33275266-33275397 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 104, 31

Conread position: 372-518
Cow position: chr18:34324981-34324836 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 104, 129

Conread position: 372-527
Cow position: chr18:16726620-16726780 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 372-527
Cow position: chr18:55697050-55696896 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 128
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 104, 139

Conread position: 372-530
Cow position: chr18:32909019-32909177 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 7, 80

Conread position: 372-530
Cow position: chr18:43712017-43712181 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 103

Conread position: 372-531
Cow position: chr18:15831623-15831467 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 134
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 130, 0

Conread position: 372-532
Cow position: chr18:1190749-1190585 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 132
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 47, 0

Conread position: 372-532
Cow position: chr18:6157887-6158045 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 102, 130

Conread position: 372-532
Cow position: chr18:11362223-11362386 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 104, 0

Conread position: 372-532
Cow position: chr18:16842089-16841915 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 372-532
Cow position: chr18:35797593-35797747 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 130
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 117, 0

Conread position: 372-532
Cow position: chr18:38126478-38126313 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 27, 85

Conread position: 372-532
Cow position: chr18:44493513-44493349 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 372-532
Cow position: chr18:46321007-46320846 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 122, 51

Conread position: 372-532
Cow position: chr18:48458644-48458806 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 21, 143

Conread position: 372-532
Cow position: chr18:50700657-50700821 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 134
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 26, 83

Conread position: 372-536
Cow position: chr18:42061046-42061216 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 28, 75

Conread position: 372-550
Cow position: chr18:25970662-25970491 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 85

Conread position: 373-525
Cow position: chr18:33853223-33853371 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 103, 78

Conread position: 373-526
Cow position: chr18:43113974-43113818 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 32, 82

Conread position: 373-529
Cow position: chr18:10101463-10101619 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 130
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 103, 52

Conread position: 373-532
Cow position: chr18:7409327-7409167 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 133
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 103, 0

Conread position: 373-532
Cow position: chr18:24364085-24363926 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 135
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 74, 63

Conread position: 373-532
Cow position: chr18:33843115-33842948 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 373-538
Cow position: chr18:37331554-37331386 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 103, 0

Conread position: 373-550
Cow position: chr18:30566584-30566403 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 149
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 104, 17

Conread position: 374-478
Cow position: chr18:18727593-18727490 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 82, 53

Conread position: 374-532
Cow position: chr18:5755953-5756115 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 134
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 32, 0

Conread position: 376-536
Cow position: chr18:24221548-24221709 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 132
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 99, 0

Conread position: 378-532
Cow position: chr18:4040150-4040305 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 131, 56

Conread position: 380-532
Cow position: chr18:48717957-48717809 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 93

Conread position: 381-532
Cow position: chr18:16448522-16448675 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 22, 134

Conread position: 381-532
Cow position: chr18:19363914-19364069 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 134
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 20, 75

Conread position: 385-530
Cow position: chr18:29949736-29949879 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 125, 95

Conread position: 389-531
Cow position: chr18:51412336-51412478 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 87, 21

Conread position: 391-512
Cow position: chr18:44408410-44408533 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 6, 0

Conread position: 392-513
Cow position: chr18:21095110-21094989 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 84, 111

Conread position: 392-532
Cow position: chr18:44212464-44212605 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 68

Conread position: 393-535
Cow position: chr18:35607920-35608066 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 394-532
Cow position: chr18:4378763-4378902 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 116, 75

Conread position: 394-532
Cow position: chr18:49940714-49940581 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 82, 59

Conread position: 398-532
Cow position: chr18:28794837-28794972 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 81, 133

Conread position: 400-532
Cow position: chr18:51241027-51241162 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 405-532
Cow position: chr18:42967494-42967367 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.