Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8057M16.3 |
| Conread position: | 372-491 |
| Cow position: | chr22:12535778-12535659 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 102, 66 |
| Conread position: | 372-498 |
| Cow position: | chr22:15398578-15398447 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 22, 61 |
| Conread position: | 372-502 |
| Cow position: | chr22:14118980-14119111 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 372-502 |
| Cow position: | chr22:23861157-23861021 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 372-506 |
| Cow position: | chr22:13274484-13274619 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 372-513 |
| Cow position: | chr22:21650170-21650315 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 372-513 |
| Cow position: | chr22:22997476-22997622 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 372-520 |
| Cow position: | chr22:19040364-19040214 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 71, 26 |
| Conread position: | 372-521 |
| Cow position: | chr22:39983197-39983041 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 372-526 |
| Cow position: | chr22:4651176-4651340 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 372-529 |
| Cow position: | chr22:1422-1573 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 40, 80 |
| Conread position: | 372-529 |
| Cow position: | chr22:2913279-2913440 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 27, 7 |
| Conread position: | 372-532 |
| Cow position: | chr22:6859230-6859073 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 104, 21 |
| Conread position: | 372-532 |
| Cow position: | chr22:7301836-7301675 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 22, 83 |
| Conread position: | 372-532 |
| Cow position: | chr22:15358245-15358412 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 372-532 |
| Cow position: | chr22:17780727-17780564 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 139 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 372-532 |
| Cow position: | chr22:18486924-18486763 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 138, 90 |
| Conread position: | 372-532 |
| Cow position: | chr22:23580840-23580679 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 37, 12 |
| Conread position: | 372-532 |
| Cow position: | chr22:25715005-25715171 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 372-532 |
| Cow position: | chr22:26941793-26941954 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 372-532 |
| Cow position: | chr22:29004419-29004261 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 137, 18 |
| Conread position: | 372-532 |
| Cow position: | chr22:32690435-32690274 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 138, 25 |
| Conread position: | 372-532 |
| Cow position: | chr22:33386505-33386344 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 108, 26 |
| Conread position: | 372-532 |
| Cow position: | chr22:42957711-42957863 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 104, 63 |
| Conread position: | 372-532 |
| Cow position: | chr22:43262457-43262614 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 104, 139 |
| Conread position: | 372-542 |
| Cow position: | chr22:41389107-41389285 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 372-549 |
| Cow position: | chr22:32221642-32221817 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 106, 45 |
| Conread position: | 372-550 |
| Cow position: | chr22:29868606-29868428 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 101, 139 |
| Conread position: | 372-551 |
| Cow position: | chr22:9466613-9466795 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 147 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 372-552 |
| Cow position: | chr22:5622716-5622535 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 29, 10 |
| Conread position: | 373-512 |
| Cow position: | chr22:23270346-23270202 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 373-530 |
| Cow position: | chr22:31192572-31192413 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 107, 47 |
| Conread position: | 373-532 |
| Cow position: | chr22:5927958-5927798 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 22, 85 |
| Conread position: | 373-532 |
| Cow position: | chr22:23037746-23037579 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 373-534 |
| Cow position: | chr22:22999594-22999760 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 23, 80 |
| Conread position: | 373-542 |
| Cow position: | chr22:45355381-45355553 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 375-501 |
| Cow position: | chr22:10649774-10649647 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 375-532 |
| Cow position: | chr22:45291326-45291487 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 375-551 |
| Cow position: | chr22:139298-139128 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 26, 99 |
| Conread position: | 376-511 |
| Cow position: | chr22:13235527-13235663 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 376-532 |
| Cow position: | chr22:34675527-34675686 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 377-544 |
| Cow position: | chr22:32053382-32053553 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 144 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 378-528 |
| Cow position: | chr22:19207973-19208127 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 379-531 |
| Cow position: | chr22:26760722-26760873 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 21, 76 |
| Conread position: | 380-506 |
| Cow position: | chr22:1277078-1277208 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 20, 67 |
| Conread position: | 381-530 |
| Cow position: | chr22:37554502-37554352 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 6, 71 |
| Conread position: | 381-532 |
| Cow position: | chr22:23009932-23009777 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 31, 21 |
| Conread position: | 381-532 |
| Cow position: | chr22:31496981-31496833 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 6, 112 |
| Conread position: | 384-532 |
| Cow position: | chr22:31512787-31512642 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 90, 35 |
| Conread position: | 386-542 |
| Cow position: | chr22:33066974-33067135 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 387-539 |
| Cow position: | chr22:22210221-22210070 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 120 |
| Conread position: | 391-524 |
| Cow position: | chr22:10017205-10017073 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 83, 27 |
| Conread position: | 391-528 |
| Cow position: | chr22:17074393-17074532 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 92, 9 |
| Conread position: | 391-532 |
| Cow position: | chr22:44468827-44468971 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 393-529 |
| Cow position: | chr22:26011914-26012046 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 117, 60 |
| Conread position: | 393-532 |
| Cow position: | chr22:2135800-2135935 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 83, 58 |
| Conread position: | 393-532 |
| Cow position: | chr22:23751156-23751014 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 394-530 |
| Cow position: | chr22:26764057-26764192 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 394-534 |
| Cow position: | chr22:19069114-19069253 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 90, 42 |
| Conread position: | 394-542 |
| Cow position: | chr22:13057682-13057530 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 403-532 |
| Cow position: | chr22:10555464-10555335 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 80, 16 |
| Conread position: | 409-531 |
| Cow position: | chr22:3063709-3063584 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 409-532 |
| Cow position: | chr22:9594238-9594362 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 34, 116 |
| Conread position: | 415-532 |
| Cow position: | chr22:30520942-30521062 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 417-552 |
| Cow position: | chr22:33763434-33763298 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 57, 39 |
| Conread position: | 423-531 |
| Cow position: | chr22:44835711-44835820 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 426-531 |
| Cow position: | chr22:30919303-30919411 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
Show alignments to all cow chromosomes.