Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8057M16.3 |
| Conread position: | 353-532 |
| Cow position: | chr23:347763-347577 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 9, 106 |
| Conread position: | 356-529 |
| Cow position: | chr23:19791967-19792135 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 21, 143 |
| Conread position: | 369-509 |
| Cow position: | chr23:30210342-30210200 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 370-532 |
| Cow position: | chr23:28721232-28721066 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 31, 85 |
| Conread position: | 371-509 |
| Cow position: | chr23:6667470-6667598 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 372-485 |
| Cow position: | chr23:9711586-9711472 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 372-492 |
| Cow position: | chr23:13319950-13320067 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 372-515 |
| Cow position: | chr23:35498018-35497875 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 105, 90 |
| Conread position: | 372-530 |
| Cow position: | chr23:14840506-14840347 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 33, 142 |
| Conread position: | 372-530 |
| Cow position: | chr23:16793591-16793750 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 134 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 372-531 |
| Cow position: | chr23:17000712-17000868 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 29, 87 |
| Conread position: | 372-531 |
| Cow position: | chr23:28894949-28894784 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 29, 10 |
| Conread position: | 372-532 |
| Cow position: | chr23:1717544-1717377 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 372-532 |
| Cow position: | chr23:4956030-4956191 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 99, 26 |
| Conread position: | 372-532 |
| Cow position: | chr23:5389706-5389871 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 372-532 |
| Cow position: | chr23:7611273-7611431 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 140 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 372-532 |
| Cow position: | chr23:11564367-11564207 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 104, 80 |
| Conread position: | 372-532 |
| Cow position: | chr23:13359832-13359998 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 44 |
| Conread position: | 372-532 |
| Cow position: | chr23:14126575-14126735 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 103, 41 |
| Conread position: | 372-532 |
| Cow position: | chr23:18326814-18326976 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 104, 13 |
| Conread position: | 372-532 |
| Cow position: | chr23:21276016-21275847 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 372-532 |
| Cow position: | chr23:23192144-23191992 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 372-532 |
| Cow position: | chr23:26217570-26217727 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 110, 38 |
| Conread position: | 372-532 |
| Cow position: | chr23:26861447-26861604 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 46, 29 |
| Conread position: | 372-532 |
| Cow position: | chr23:35155380-35155546 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 28, 58 |
| Conread position: | 372-532 |
| Cow position: | chr23:37224061-37223901 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 104, 29 |
| Conread position: | 372-532 |
| Cow position: | chr23:38941627-38941793 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 23, 85 |
| Conread position: | 372-546 |
| Cow position: | chr23:16237245-16237077 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 107, 13 |
| Conread position: | 372-546 |
| Cow position: | chr23:19636255-19636075 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 61, 107 |
| Conread position: | 372-552 |
| Cow position: | chr23:21866747-21866934 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 29, 61 |
| Conread position: | 373-484 |
| Cow position: | chr23:29393441-29393554 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 373-530 |
| Cow position: | chr23:30773681-30773531 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 104, 40 |
| Conread position: | 373-532 |
| Cow position: | chr23:20585692-20585529 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 373-532 |
| Cow position: | chr23:29272121-29272282 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 19, 142 |
| Conread position: | 374-513 |
| Cow position: | chr23:11434250-11434110 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 13, 120 |
| Conread position: | 375-532 |
| Cow position: | chr23:22660574-22660417 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 101, 76 |
| Conread position: | 376-531 |
| Cow position: | chr23:8930128-8929969 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 24, 118 |
| Conread position: | 376-546 |
| Cow position: | chr23:30307917-30308088 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 27, 131 |
| Conread position: | 380-532 |
| Cow position: | chr23:17092484-17092329 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 21, 139 |
| Conread position: | 380-536 |
| Cow position: | chr23:23470927-23471085 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 100, 37 |
| Conread position: | 383-532 |
| Cow position: | chr23:36082605-36082757 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 393-495 |
| Cow position: | chr23:10066440-10066337 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 393-532 |
| Cow position: | chr23:19981655-19981512 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 393-542 |
| Cow position: | chr23:1550907-1551059 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 394-528 |
| Cow position: | chr23:28701018-28701155 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 401-532 |
| Cow position: | chr23:30736109-30735978 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 81, 50 |
| Conread position: | 409-531 |
| Cow position: | chr23:26067138-26067262 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 414-529 |
| Cow position: | chr23:18967837-18967719 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
Show alignments to all cow chromosomes.