Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8057M16.3 |
| Conread position: | 372-461 |
| Cow position: | chr26:8823738-8823827 (view UCSC Genome Browser custom track) |
| Alignm length: | 90 |
| Alignm identity: | 79 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 372-486 |
| Cow position: | chr26:33227815-33227928 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 90 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 372-503 |
| Cow position: | chr26:30605338-30605212 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 110, 29 |
| Conread position: | 372-513 |
| Cow position: | chr26:19768787-19768640 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 372-515 |
| Cow position: | chr26:17155302-17155162 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 104, 79 |
| Conread position: | 372-517 |
| Cow position: | chr26:19903401-19903549 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 30, 74 |
| Conread position: | 372-528 |
| Cow position: | chr26:14924505-14924664 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 372-531 |
| Cow position: | chr26:2769819-2769657 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 372-531 |
| Cow position: | chr26:24183023-24182868 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 138 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 104, 79 |
| Conread position: | 372-532 |
| Cow position: | chr26:7955872-7956034 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 29, 73 |
| Conread position: | 372-532 |
| Cow position: | chr26:9666387-9666230 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 110, 13 |
| Conread position: | 372-532 |
| Cow position: | chr26:10137721-10137556 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 29, 92 |
| Conread position: | 372-532 |
| Cow position: | chr26:10523427-10523267 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 143 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 45 |
| Conread position: | 372-532 |
| Cow position: | chr26:12216876-12217031 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 137, 63 |
| Conread position: | 372-532 |
| Cow position: | chr26:12652220-12652058 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 104, 7 |
| Conread position: | 372-532 |
| Cow position: | chr26:14080726-14080889 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 27, 73 |
| Conread position: | 372-532 |
| Cow position: | chr26:16604306-16604478 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 372-532 |
| Cow position: | chr26:18719277-18719440 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 136 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 372-532 |
| Cow position: | chr26:27585796-27585958 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 99, 5 |
| Conread position: | 372-539 |
| Cow position: | chr26:3756246-3756411 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 164, 110 |
| Conread position: | 372-542 |
| Cow position: | chr26:12669219-12669395 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 34, 94 |
| Conread position: | 372-546 |
| Cow position: | chr26:28790100-28789925 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 104, 139 |
| Conread position: | 373-518 |
| Cow position: | chr26:3019394-3019247 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 373-521 |
| Cow position: | chr26:17204124-17203974 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 28, 141 |
| Conread position: | 373-531 |
| Cow position: | chr26:12520048-12520213 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 373-532 |
| Cow position: | chr26:21859844-21860007 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 27, 114 |
| Conread position: | 373-532 |
| Cow position: | chr26:29244422-29244581 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 70, 53 |
| Conread position: | 373-546 |
| Cow position: | chr26:32854263-32854093 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 103, 136 |
| Conread position: | 374-531 |
| Cow position: | chr26:7387788-7387947 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 27, 141 |
| Conread position: | 375-534 |
| Cow position: | chr26:32215467-32215634 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 33, 111 |
| Conread position: | 375-550 |
| Cow position: | chr26:11567946-11567768 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 107, 90 |
| Conread position: | 377-530 |
| Cow position: | chr26:8651582-8651426 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 378-532 |
| Cow position: | chr26:16851164-16851315 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 14, 82 |
| Conread position: | 380-513 |
| Cow position: | chr26:19935330-19935196 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 381-531 |
| Cow position: | chr26:7162380-7162226 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 6, 86 |
| Conread position: | 387-528 |
| Cow position: | chr26:10292814-10292956 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 122, 46 |
| Conread position: | 392-532 |
| Cow position: | chr26:6299467-6299605 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 83, 24 |
| Conread position: | 393-526 |
| Cow position: | chr26:19332959-19332826 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 85, 29 |
| Conread position: | 393-534 |
| Cow position: | chr26:2246045-2246184 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 83, 26 |
| Conread position: | 394-530 |
| Cow position: | chr26:19110959-19111096 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 116, 88 |
| Conread position: | 394-532 |
| Cow position: | chr26:782885-782747 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 118 |
| Conread position: | 396-532 |
| Cow position: | chr26:21578053-21577914 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 398-536 |
| Cow position: | chr26:30385825-30385969 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 81, 55 |
| Conread position: | 404-534 |
| Cow position: | chr26:25241684-25241815 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 78, 9 |
| Conread position: | 410-532 |
| Cow position: | chr26:19649051-19649171 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 23, 31 |
| Conread position: | 414-516 |
| Cow position: | chr26:13843561-13843458 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 416-516 |
| Cow position: | chr26:8518268-8518168 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 66, 30 |
| Conread position: | 417-531 |
| Cow position: | chr26:33194694-33194812 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 7, 20 |
Show alignments to all cow chromosomes.