Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8057M16.3 |
| Conread position: | 359-544 |
| Cow position: | chr27:11746557-11746362 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 361-532 |
| Cow position: | chr27:6347793-6347965 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 118, 12 |
| Conread position: | 370-532 |
| Cow position: | chr27:26299798-26299633 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 24, 114 |
| Conread position: | 371-532 |
| Cow position: | chr27:24333667-24333825 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 16 |
| Conread position: | 372-514 |
| Cow position: | chr27:3688258-3688397 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 372-529 |
| Cow position: | chr27:12244172-12244336 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 372-531 |
| Cow position: | chr27:10119125-10119295 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 372-532 |
| Cow position: | chr27:1536766-1536940 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 372-532 |
| Cow position: | chr27:11356588-11356744 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 113, 98 |
| Conread position: | 372-532 |
| Cow position: | chr27:12247632-12247474 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 104, 64 |
| Conread position: | 372-532 |
| Cow position: | chr27:13005797-13005636 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 110, 59 |
| Conread position: | 372-532 |
| Cow position: | chr27:13958390-13958556 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 372-532 |
| Cow position: | chr27:13970436-13970592 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 110, 79 |
| Conread position: | 372-532 |
| Cow position: | chr27:14937476-14937642 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 140 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 372-532 |
| Cow position: | chr27:16525891-16526054 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 372-532 |
| Cow position: | chr27:19083762-19083930 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 372-532 |
| Cow position: | chr27:20766006-20766166 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 78, 65 |
| Conread position: | 372-532 |
| Cow position: | chr27:22108250-22108419 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 372-532 |
| Cow position: | chr27:25880055-25879889 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 372-532 |
| Cow position: | chr27:25982770-25982931 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 138, 59 |
| Conread position: | 372-532 |
| Cow position: | chr27:26441102-26441261 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 102, 18 |
| Conread position: | 373-479 |
| Cow position: | chr27:29019786-29019891 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 373-506 |
| Cow position: | chr27:21138780-21138646 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 131 |
| Conread position: | 373-529 |
| Cow position: | chr27:783652-783496 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 34, 39 |
| Conread position: | 373-530 |
| Cow position: | chr27:26492749-26492906 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 103, 54 |
| Conread position: | 373-532 |
| Cow position: | chr27:8048787-8048944 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 108, 52 |
| Conread position: | 373-532 |
| Cow position: | chr27:23662644-23662806 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 374-532 |
| Cow position: | chr27:25998654-25998493 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 23, 138 |
| Conread position: | 376-531 |
| Cow position: | chr27:16493530-16493374 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 137, 60 |
| Conread position: | 376-542 |
| Cow position: | chr27:30365268-30365094 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 377-524 |
| Cow position: | chr27:18219342-18219193 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 99, 143 |
| Conread position: | 377-527 |
| Cow position: | chr27:21970937-21971089 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 377-532 |
| Cow position: | chr27:19601317-19601162 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 132 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 129, 91 |
| Conread position: | 386-532 |
| Cow position: | chr27:2403343-2403490 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 390-532 |
| Cow position: | chr27:24341837-24341689 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 391-512 |
| Cow position: | chr27:21991461-21991340 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 85, 7 |
| Conread position: | 391-530 |
| Cow position: | chr27:18028542-18028401 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 20 |
| Conread position: | 393-530 |
| Cow position: | chr27:29339667-29339528 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 394-531 |
| Cow position: | chr27:17875214-17875354 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 394-532 |
| Cow position: | chr27:1899644-1899784 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 86, 107 |
| Conread position: | 397-532 |
| Cow position: | chr27:9692095-9692230 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 79, 11 |
| Conread position: | 398-549 |
| Cow position: | chr27:31339830-31339985 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 82, 20 |
| Conread position: | 403-551 |
| Cow position: | chr27:1085033-1085179 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 415-532 |
| Cow position: | chr27:7983196-7983316 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 424-532 |
| Cow position: | chr27:19056895-19057005 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 426-532 |
| Cow position: | chr27:11322499-11322395 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 433-532 |
| Cow position: | chr27:12425327-12425426 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 84 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 49, 63 |
Show alignments to all cow chromosomes.