Cow genome map
Conread name: | Ss1.1-Pig4-TMW8057M16.3 |
Conread position: | 344-531 |
Cow position: | chr5:20144386-20144558 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 145 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 136, 6 |
Conread position: | 345-532 |
Cow position: | chr5:36028144-36027954 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 155 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 14, 77 |
Conread position: | 346-542 |
Cow position: | chr5:29401043-29400853 (view UCSC Genome Browser custom track) |
Alignm length: | 201 |
Alignm identity: | 149 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 30, 13 |
Conread position: | 358-532 |
Cow position: | chr5:38936571-38936399 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 142 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 151, 94 |
Conread position: | 360-516 |
Cow position: | chr5:3225955-3225802 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 125 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 362-531 |
Cow position: | chr5:67149995-67149823 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 141 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 112, 0 |
Conread position: | 372-480 |
Cow position: | chr5:17869721-17869826 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 89 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 80, 0 |
Conread position: | 372-495 |
Cow position: | chr5:54533018-54533141 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 103 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 372-495 |
Cow position: | chr5:73526399-73526523 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 104 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 109, 0 |
Conread position: | 372-496 |
Cow position: | chr5:34184252-34184381 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 108 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 372-509 |
Cow position: | chr5:30978386-30978524 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 107 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 372-513 |
Cow position: | chr5:3752885-3753025 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 118 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 107, 29 |
Conread position: | 372-528 |
Cow position: | chr5:23640983-23640827 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 137 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 107, 38 |
Conread position: | 372-530 |
Cow position: | chr5:21531077-21530916 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 130 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 29, 144 |
Conread position: | 372-530 |
Cow position: | chr5:41604656-41604817 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 133 |
Alignm E-value: | 8e-38 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 372-530 |
Cow position: | chr5:50425455-50425294 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 137 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 372-530 |
Cow position: | chr5:64399041-64399197 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 130 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 107, 128 |
Conread position: | 372-531 |
Cow position: | chr5:18553925-18554081 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 124 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 29, 62 |
Conread position: | 372-532 |
Cow position: | chr5:2819290-2819453 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 126 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 372-532 |
Cow position: | chr5:3649429-3649268 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 137 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 372-532 |
Cow position: | chr5:14154180-14154338 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 122 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 104, 139 |
Conread position: | 372-532 |
Cow position: | chr5:15837861-15837699 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 126 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 25, 49 |
Conread position: | 372-532 |
Cow position: | chr5:17028123-17028291 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 128 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 372-532 |
Cow position: | chr5:21195090-21194927 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 142 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 372-532 |
Cow position: | chr5:21356857-21356696 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 132 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 30, 123 |
Conread position: | 372-532 |
Cow position: | chr5:30332983-30333146 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 143 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 372-532 |
Cow position: | chr5:34279574-34279417 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 129 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 104, 131 |
Conread position: | 372-532 |
Cow position: | chr5:36487667-36487499 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 123 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 372-532 |
Cow position: | chr5:38629319-38629482 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 127 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 372-532 |
Cow position: | chr5:39442326-39442492 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 136 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 28, 97 |
Conread position: | 372-532 |
Cow position: | chr5:39695680-39695847 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 132 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 372-532 |
Cow position: | chr5:41598683-41598516 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 129 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 372-532 |
Cow position: | chr5:41636900-41637058 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 131 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 104, 79 |
Conread position: | 372-532 |
Cow position: | chr5:45396381-45396217 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 126 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 17, 91 |
Conread position: | 372-532 |
Cow position: | chr5:46798272-46798438 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 126 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 27, 72 |
Conread position: | 372-532 |
Cow position: | chr5:56385243-56385409 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 136 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 34, 85 |
Conread position: | 372-532 |
Cow position: | chr5:58748799-58748963 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 136 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 26, 120 |
Conread position: | 372-533 |
Cow position: | chr5:1349764-1349597 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 135 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 31, 80 |
Conread position: | 372-539 |
Cow position: | chr5:73556163-73555998 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 128 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 119, 0 |
Conread position: | 372-545 |
Cow position: | chr5:40234153-40234321 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 139 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 138, 79 |
Conread position: | 372-551 |
Cow position: | chr5:3442478-3442661 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 137 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 27, 54 |
Conread position: | 372-552 |
Cow position: | chr5:34906110-34906284 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 141 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 46, 26 |
Conread position: | 373-508 |
Cow position: | chr5:49655991-49655858 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 120 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 101, 78 |
Conread position: | 373-531 |
Cow position: | chr5:1343821-1343662 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 137 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 137, 92 |
Conread position: | 373-531 |
Cow position: | chr5:17267862-17267699 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 130 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 373-532 |
Cow position: | chr5:40711406-40711251 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 140 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 103, 83 |
Conread position: | 374-529 |
Cow position: | chr5:13044376-13044219 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 116 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 139, 0 |
Conread position: | 374-532 |
Cow position: | chr5:54090066-54090228 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 124 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 28, 143 |
Conread position: | 374-533 |
Cow position: | chr5:42316879-42316718 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 120 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 106, 43 |
Conread position: | 375-530 |
Cow position: | chr5:70169667-70169516 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 127 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 23, 80 |
Conread position: | 375-531 |
Cow position: | chr5:45558955-45559116 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 132 |
Alignm E-value: | 6e-35 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 375-533 |
Cow position: | chr5:51503039-51503200 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 134 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 101, 0 |
Conread position: | 376-503 |
Cow position: | chr5:41907066-41907194 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 107 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 99, 0 |
Conread position: | 376-523 |
Cow position: | chr5:33341104-33340951 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 119 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 376-523 |
Cow position: | chr5:33342832-33342679 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 120 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 376-532 |
Cow position: | chr5:3058956-3059113 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 132 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 376-532 |
Cow position: | chr5:25919597-25919440 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 120 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 6, 55 |
Conread position: | 376-532 |
Cow position: | chr5:47680985-47680821 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 134 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 376-532 |
Cow position: | chr5:58343891-58344054 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 131 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 377-532 |
Cow position: | chr5:18276519-18276673 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 117 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 132, 74 |
Conread position: | 378-532 |
Cow position: | chr5:27293630-27293474 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 121 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 98, 9 |
Conread position: | 378-532 |
Cow position: | chr5:27615552-27615708 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 128 |
Alignm E-value: | 5e-34 |
Alignm gaps (pig, cow): | 98, 32 |
Conread position: | 378-532 |
Cow position: | chr5:49567464-49567617 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 130 |
Alignm E-value: | 8.99999e-40 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 378-532 |
Cow position: | chr5:63328858-63328704 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 122 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 23, 118 |
Conread position: | 378-536 |
Cow position: | chr5:63188288-63188131 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 134 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 381-523 |
Cow position: | chr5:69773589-69773732 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 118 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 110, 41 |
Conread position: | 382-531 |
Cow position: | chr5:38621459-38621600 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 118 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 128, 103 |
Conread position: | 383-532 |
Cow position: | chr5:41605768-41605621 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 123 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 93, 128 |
Conread position: | 385-539 |
Cow position: | chr5:23536226-23536378 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 116 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 47, 25 |
Conread position: | 387-522 |
Cow position: | chr5:17097759-17097894 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 119 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 89, 75 |
Conread position: | 391-531 |
Cow position: | chr5:39753603-39753462 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 113 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 393-532 |
Cow position: | chr5:4631156-4631292 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 116 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 85, 63 |
Conread position: | 393-532 |
Cow position: | chr5:17874158-17874300 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 111 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 15, 63 |
Conread position: | 394-511 |
Cow position: | chr5:19131905-19132023 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 93 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 394-532 |
Cow position: | chr5:18695214-18695351 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 113 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 38, 118 |
Conread position: | 394-532 |
Cow position: | chr5:23366710-23366573 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 110 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 80, 122 |
Conread position: | 394-532 |
Cow position: | chr5:33697494-33697358 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 109 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 82, 119 |
Conread position: | 394-532 |
Cow position: | chr5:36825375-36825510 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 107 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 108, 0 |
Conread position: | 394-532 |
Cow position: | chr5:37272449-37272585 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 107 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 82, 57 |
Conread position: | 394-532 |
Cow position: | chr5:45028764-45028904 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 107 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 88, 7 |
Conread position: | 394-545 |
Cow position: | chr5:75687270-75687117 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 121 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 121, 0 |
Conread position: | 397-532 |
Cow position: | chr5:39134203-39134064 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 111 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 35, 0 |
Conread position: | 403-545 |
Cow position: | chr5:66298978-66299120 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 112 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 13, 40 |
Conread position: | 411-532 |
Cow position: | chr5:48067770-48067894 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 98 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 69, 0 |
Conread position: | 414-531 |
Cow position: | chr5:17944199-17944318 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 99 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 95, 0 |
Conread position: | 419-532 |
Cow position: | chr5:33369535-33369647 (view UCSC Genome Browser custom track) |
Alignm length: | 114 |
Alignm identity: | 98 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 420-532 |
Cow position: | chr5:57381631-57381741 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 97 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 89, 35 |
Conread position: | 420-546 |
Cow position: | chr5:26370281-26370411 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 105 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 426-552 |
Cow position: | chr5:56854127-56853997 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 107 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 107, 0 |
Show alignments to all cow chromosomes.