Cow genome map

Conread name: Ss1.1-Pig4-TMW8057M16.3

Conread position: 344-531
Cow position: chr5:20144386-20144558 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 136, 6

Conread position: 345-532
Cow position: chr5:36028144-36027954 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 155
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 14, 77

Conread position: 346-542
Cow position: chr5:29401043-29400853 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 30, 13

Conread position: 358-532
Cow position: chr5:38936571-38936399 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 142
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 151, 94

Conread position: 360-516
Cow position: chr5:3225955-3225802 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 92, 0

Conread position: 362-531
Cow position: chr5:67149995-67149823 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 141
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 112, 0

Conread position: 372-480
Cow position: chr5:17869721-17869826 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 372-495
Cow position: chr5:54533018-54533141 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 372-495
Cow position: chr5:73526399-73526523 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 109, 0

Conread position: 372-496
Cow position: chr5:34184252-34184381 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 108
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 0

Conread position: 372-509
Cow position: chr5:30978386-30978524 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 104, 0

Conread position: 372-513
Cow position: chr5:3752885-3753025 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 118
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 107, 29

Conread position: 372-528
Cow position: chr5:23640983-23640827 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 137
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 107, 38

Conread position: 372-530
Cow position: chr5:21531077-21530916 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 29, 144

Conread position: 372-530
Cow position: chr5:41604656-41604817 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 133
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 102, 0

Conread position: 372-530
Cow position: chr5:50425455-50425294 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 137
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 11, 0

Conread position: 372-530
Cow position: chr5:64399041-64399197 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 130
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 107, 128

Conread position: 372-531
Cow position: chr5:18553925-18554081 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 62

Conread position: 372-532
Cow position: chr5:2819290-2819453 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 72, 0

Conread position: 372-532
Cow position: chr5:3649429-3649268 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 137
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 99, 0

Conread position: 372-532
Cow position: chr5:14154180-14154338 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 104, 139

Conread position: 372-532
Cow position: chr5:15837861-15837699 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 25, 49

Conread position: 372-532
Cow position: chr5:17028123-17028291 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 372-532
Cow position: chr5:21195090-21194927 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 142
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 104, 0

Conread position: 372-532
Cow position: chr5:21356857-21356696 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 132
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 30, 123

Conread position: 372-532
Cow position: chr5:30332983-30333146 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 143
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 372-532
Cow position: chr5:34279574-34279417 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 129
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 104, 131

Conread position: 372-532
Cow position: chr5:36487667-36487499 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 372-532
Cow position: chr5:38629319-38629482 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 108, 0

Conread position: 372-532
Cow position: chr5:39442326-39442492 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 136
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 28, 97

Conread position: 372-532
Cow position: chr5:39695680-39695847 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 0

Conread position: 372-532
Cow position: chr5:41598683-41598516 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 372-532
Cow position: chr5:41636900-41637058 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 131
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 104, 79

Conread position: 372-532
Cow position: chr5:45396381-45396217 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 17, 91

Conread position: 372-532
Cow position: chr5:46798272-46798438 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 27, 72

Conread position: 372-532
Cow position: chr5:56385243-56385409 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 136
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 34, 85

Conread position: 372-532
Cow position: chr5:58748799-58748963 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 136
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 26, 120

Conread position: 372-533
Cow position: chr5:1349764-1349597 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 135
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 31, 80

Conread position: 372-539
Cow position: chr5:73556163-73555998 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 119, 0

Conread position: 372-545
Cow position: chr5:40234153-40234321 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 138, 79

Conread position: 372-551
Cow position: chr5:3442478-3442661 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 54

Conread position: 372-552
Cow position: chr5:34906110-34906284 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 26

Conread position: 373-508
Cow position: chr5:49655991-49655858 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 120
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 101, 78

Conread position: 373-531
Cow position: chr5:1343821-1343662 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 137
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 137, 92

Conread position: 373-531
Cow position: chr5:17267862-17267699 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 28, 0

Conread position: 373-532
Cow position: chr5:40711406-40711251 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 140
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 103, 83

Conread position: 374-529
Cow position: chr5:13044376-13044219 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 139, 0

Conread position: 374-532
Cow position: chr5:54090066-54090228 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 28, 143

Conread position: 374-533
Cow position: chr5:42316879-42316718 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 106, 43

Conread position: 375-530
Cow position: chr5:70169667-70169516 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 23, 80

Conread position: 375-531
Cow position: chr5:45558955-45559116 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 132
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 82, 0

Conread position: 375-533
Cow position: chr5:51503039-51503200 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 134
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 101, 0

Conread position: 376-503
Cow position: chr5:41907066-41907194 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 107
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 99, 0

Conread position: 376-523
Cow position: chr5:33341104-33340951 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 376-523
Cow position: chr5:33342832-33342679 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 376-532
Cow position: chr5:3058956-3059113 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 132
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 104, 0

Conread position: 376-532
Cow position: chr5:25919597-25919440 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 6, 55

Conread position: 376-532
Cow position: chr5:47680985-47680821 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 134
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 18, 0

Conread position: 376-532
Cow position: chr5:58343891-58344054 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 131
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 377-532
Cow position: chr5:18276519-18276673 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 132, 74

Conread position: 378-532
Cow position: chr5:27293630-27293474 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 98, 9

Conread position: 378-532
Cow position: chr5:27615552-27615708 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 128
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 98, 32

Conread position: 378-532
Cow position: chr5:49567464-49567617 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 130
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 64, 0

Conread position: 378-532
Cow position: chr5:63328858-63328704 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 23, 118

Conread position: 378-536
Cow position: chr5:63188288-63188131 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 134
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 104, 0

Conread position: 381-523
Cow position: chr5:69773589-69773732 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 110, 41

Conread position: 382-531
Cow position: chr5:38621459-38621600 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 128, 103

Conread position: 383-532
Cow position: chr5:41605768-41605621 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 123
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 93, 128

Conread position: 385-539
Cow position: chr5:23536226-23536378 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 47, 25

Conread position: 387-522
Cow position: chr5:17097759-17097894 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 119
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 89, 75

Conread position: 391-531
Cow position: chr5:39753603-39753462 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 85, 0

Conread position: 393-532
Cow position: chr5:4631156-4631292 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 116
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 85, 63

Conread position: 393-532
Cow position: chr5:17874158-17874300 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 63

Conread position: 394-511
Cow position: chr5:19131905-19132023 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 394-532
Cow position: chr5:18695214-18695351 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 118

Conread position: 394-532
Cow position: chr5:23366710-23366573 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 122

Conread position: 394-532
Cow position: chr5:33697494-33697358 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 82, 119

Conread position: 394-532
Cow position: chr5:36825375-36825510 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 394-532
Cow position: chr5:37272449-37272585 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 82, 57

Conread position: 394-532
Cow position: chr5:45028764-45028904 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 7

Conread position: 394-545
Cow position: chr5:75687270-75687117 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 121, 0

Conread position: 397-532
Cow position: chr5:39134203-39134064 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 403-545
Cow position: chr5:66298978-66299120 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 40

Conread position: 411-532
Cow position: chr5:48067770-48067894 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 414-531
Cow position: chr5:17944199-17944318 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 95, 0

Conread position: 419-532
Cow position: chr5:33369535-33369647 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 98
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 420-532
Cow position: chr5:57381631-57381741 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 35

Conread position: 420-546
Cow position: chr5:26370281-26370411 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 426-552
Cow position: chr5:56854127-56853997 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 107, 0

Show alignments to all cow chromosomes.