Cow genome map

Conread name: Ss1.1-Pig4-TMW8057M16.3

Conread position: 360-542
Cow position: chr6:7707164-7707355 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 151
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 37, 0

Conread position: 360-552
Cow position: chr6:38594206-38594009 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 94

Conread position: 363-494
Cow position: chr6:9454324-9454453 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 9, 25

Conread position: 367-531
Cow position: chr6:3078552-3078704 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 109, 53

Conread position: 369-532
Cow position: chr6:6367627-6367464 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 110, 21

Conread position: 370-517
Cow position: chr6:29649147-29649300 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 31, 6

Conread position: 371-482
Cow position: chr6:50317999-50317887 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 97
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 105, 0

Conread position: 372-482
Cow position: chr6:65852711-65852821 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 372-508
Cow position: chr6:64427267-64427408 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 372-513
Cow position: chr6:59588361-59588220 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 68, 75

Conread position: 372-521
Cow position: chr6:16733462-16733613 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 125
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 107, 57

Conread position: 372-521
Cow position: chr6:47858333-47858482 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 124
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 101, 86

Conread position: 372-525
Cow position: chr6:24583179-24583029 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 104, 29

Conread position: 372-527
Cow position: chr6:1890535-1890373 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 136
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 95, 0

Conread position: 372-528
Cow position: chr6:15782472-15782309 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 372-530
Cow position: chr6:32412592-32412434 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 97, 53

Conread position: 372-531
Cow position: chr6:6943637-6943478 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 29, 48

Conread position: 372-531
Cow position: chr6:7835961-7836110 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 372-532
Cow position: chr6:827661-827498 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 131
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 104, 0

Conread position: 372-532
Cow position: chr6:4164124-4163961 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 106, 79

Conread position: 372-532
Cow position: chr6:6596618-6596775 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 111, 96

Conread position: 372-532
Cow position: chr6:7173707-7173551 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 83

Conread position: 372-532
Cow position: chr6:8318118-8317960 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 33, 40

Conread position: 372-532
Cow position: chr6:13718806-13718974 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 142
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 29, 0

Conread position: 372-532
Cow position: chr6:15943959-15943791 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 372-532
Cow position: chr6:16220018-16219851 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 108, 45

Conread position: 372-532
Cow position: chr6:20255368-20255197 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 372-532
Cow position: chr6:24223112-24222949 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 372-532
Cow position: chr6:24557927-24558087 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 139
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 138, 42

Conread position: 372-532
Cow position: chr6:28164867-28165034 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 136
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 23, 0

Conread position: 372-532
Cow position: chr6:31425518-31425350 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 141
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 46, 14

Conread position: 372-532
Cow position: chr6:35774941-35774773 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 372-532
Cow position: chr6:37054032-37054193 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 134
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 138, 38

Conread position: 372-532
Cow position: chr6:38453728-38453572 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 104, 41

Conread position: 372-532
Cow position: chr6:52002402-52002561 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 128
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 148, 0

Conread position: 372-532
Cow position: chr6:53673906-53674070 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 134

Conread position: 372-532
Cow position: chr6:53939006-53939173 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 22, 122

Conread position: 372-532
Cow position: chr6:54144349-54144512 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 133
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 104, 0

Conread position: 372-532
Cow position: chr6:56376306-56376143 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 29, 142

Conread position: 372-532
Cow position: chr6:56860589-56860748 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 110

Conread position: 372-533
Cow position: chr6:32276988-32277152 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 141

Conread position: 372-533
Cow position: chr6:47192482-47192315 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 139
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 29, 98

Conread position: 372-538
Cow position: chr6:18469183-18469023 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 79, 0

Conread position: 372-542
Cow position: chr6:7498418-7498251 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 108, 80

Conread position: 372-542
Cow position: chr6:57118899-57118727 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 114

Conread position: 372-544
Cow position: chr6:65871932-65872108 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 16, 55

Conread position: 372-546
Cow position: chr6:18582765-18582588 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 104, 18

Conread position: 372-550
Cow position: chr6:50034684-50034502 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 22, 79

Conread position: 372-552
Cow position: chr6:46676385-46676203 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 29, 83

Conread position: 373-485
Cow position: chr6:19465962-19466075 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 373-495
Cow position: chr6:47327025-47326909 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 373-530
Cow position: chr6:24545657-24545821 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 373-532
Cow position: chr6:510259-510095 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 28, 87

Conread position: 373-532
Cow position: chr6:15997170-15997011 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 373-532
Cow position: chr6:30160366-30160527 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 140
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 146, 0

Conread position: 373-532
Cow position: chr6:37612150-37612315 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 373-543
Cow position: chr6:54062707-54062882 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 143
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 61, 134

Conread position: 373-545
Cow position: chr6:30701489-30701664 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 59, 14

Conread position: 373-550
Cow position: chr6:59496263-59496445 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 60

Conread position: 374-513
Cow position: chr6:29412740-29412600 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 122
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 100, 0

Conread position: 374-532
Cow position: chr6:38914487-38914650 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 26, 0

Conread position: 375-527
Cow position: chr6:40605-40447 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 375-532
Cow position: chr6:9026569-9026723 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 107, 0

Conread position: 375-532
Cow position: chr6:23986416-23986256 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 140

Conread position: 375-532
Cow position: chr6:24622928-24622769 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 130
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 19, 118

Conread position: 375-532
Cow position: chr6:28795382-28795543 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 78, 118

Conread position: 376-532
Cow position: chr6:41679140-41679290 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 129
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 100, 75

Conread position: 376-532
Cow position: chr6:43760412-43760563 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 135
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 100, 75

Conread position: 376-533
Cow position: chr6:10237384-10237544 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 131
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 99, 0

Conread position: 377-528
Cow position: chr6:32798821-32798670 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 125
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 97, 138

Conread position: 377-532
Cow position: chr6:19427502-19427655 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 128
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 99, 134

Conread position: 378-532
Cow position: chr6:47624830-47624677 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 114

Conread position: 380-532
Cow position: chr6:17232397-17232246 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 32, 73

Conread position: 380-532
Cow position: chr6:58316289-58316448 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 50

Conread position: 383-532
Cow position: chr6:53264740-53264592 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 123
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 93, 59

Conread position: 389-530
Cow position: chr6:41041983-41042124 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 118
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 389-537
Cow position: chr6:39073774-39073928 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 393-532
Cow position: chr6:31225774-31225917 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 394-531
Cow position: chr6:15753912-15754049 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 394-532
Cow position: chr6:2324153-2324015 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 82, 20

Conread position: 394-532
Cow position: chr6:4023170-4023311 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 394-532
Cow position: chr6:28278745-28278881 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 394-532
Cow position: chr6:36892262-36892124 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 58

Conread position: 397-532
Cow position: chr6:24649916-24650052 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 95

Conread position: 398-532
Cow position: chr6:60423268-60423133 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 111, 82

Conread position: 399-532
Cow position: chr6:33985299-33985432 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 402-529
Cow position: chr6:1907596-1907726 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 409-532
Cow position: chr6:5085626-5085502 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 429-532
Cow position: chr6:55578924-55578820 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 0

Show alignments to all cow chromosomes.