Cow genome map
Conread name: | Ss1.1-Pig4-TMW8057M16.3 |
Conread position: | 335-513 |
Cow position: | chrX:3951035-3951216 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 131 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 355-532 |
Cow position: | chrX:46028744-46028565 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 142 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 27, 13 |
Conread position: | 369-523 |
Cow position: | chrX:10289599-10289442 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 132 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 25, 13 |
Conread position: | 369-536 |
Cow position: | chrX:8103259-8103093 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 130 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 6, 36 |
Conread position: | 371-532 |
Cow position: | chrX:16291991-16291821 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 129 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 26, 89 |
Conread position: | 371-549 |
Cow position: | chrX:19879072-19879250 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 129 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 113, 26 |
Conread position: | 372-466 |
Cow position: | chrX:7345117-7345211 (view UCSC Genome Browser custom track) |
Alignm length: | 95 |
Alignm identity: | 81 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 372-490 |
Cow position: | chrX:32743567-32743685 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 98 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 372-507 |
Cow position: | chrX:43980769-43980906 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 111 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 109, 0 |
Conread position: | 372-511 |
Cow position: | chrX:27176283-27176140 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 114 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 372-514 |
Cow position: | chrX:630280-630133 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 118 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 372-515 |
Cow position: | chrX:6656416-6656560 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 111 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 372-516 |
Cow position: | chrX:17042712-17042861 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 121 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 372-518 |
Cow position: | chrX:1978543-1978688 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 111 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 104, 11 |
Conread position: | 372-519 |
Cow position: | chrX:159726-159575 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 125 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 372-521 |
Cow position: | chrX:18216303-18216452 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 115 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 71, 15 |
Conread position: | 372-527 |
Cow position: | chrX:12304590-12304752 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 125 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 29, 128 |
Conread position: | 372-530 |
Cow position: | chrX:25338217-25338379 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 133 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 29, 147 |
Conread position: | 372-532 |
Cow position: | chrX:8780073-8780240 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 127 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 372-532 |
Cow position: | chrX:8917876-8918030 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 122 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 138, 86 |
Conread position: | 372-532 |
Cow position: | chrX:9839258-9839418 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 130 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 372-532 |
Cow position: | chrX:10302369-10302534 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 131 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 28, 145 |
Conread position: | 372-532 |
Cow position: | chrX:15049524-15049679 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 123 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 105, 79 |
Conread position: | 372-532 |
Cow position: | chrX:15329672-15329839 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 129 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 372-532 |
Cow position: | chrX:18142424-18142263 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 133 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 22, 142 |
Conread position: | 372-532 |
Cow position: | chrX:18287047-18286886 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 126 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 22, 114 |
Conread position: | 372-532 |
Cow position: | chrX:19678238-19678083 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 127 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 110, 75 |
Conread position: | 372-532 |
Cow position: | chrX:25388208-25388055 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 124 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 372-532 |
Cow position: | chrX:25713825-25713992 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 134 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 372-532 |
Cow position: | chrX:27287703-27287542 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 140 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 105, 0 |
Conread position: | 372-532 |
Cow position: | chrX:27771543-27771381 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 126 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 112, 75 |
Conread position: | 372-532 |
Cow position: | chrX:30980106-30979939 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 125 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 372-532 |
Cow position: | chrX:36009883-36009719 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 125 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 22, 144 |
Conread position: | 372-532 |
Cow position: | chrX:36840896-36841057 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 134 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 372-532 |
Cow position: | chrX:41083944-41084113 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 129 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 22, 89 |
Conread position: | 372-532 |
Cow position: | chrX:42011310-42011478 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 128 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 372-532 |
Cow position: | chrX:46084000-46084169 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 138 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 372-532 |
Cow position: | chrX:48089375-48089207 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 128 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 372-534 |
Cow position: | chrX:21640459-21640622 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 133 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 151, 0 |
Conread position: | 372-534 |
Cow position: | chrX:28787382-28787539 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 129 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 31, 80 |
Conread position: | 372-534 |
Cow position: | chrX:33802974-33802809 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 134 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 372-535 |
Cow position: | chrX:43426324-43426490 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 128 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 28, 144 |
Conread position: | 372-536 |
Cow position: | chrX:31602687-31602856 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 128 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 372-549 |
Cow position: | chrX:6674890-6674698 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 143 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 23, 81 |
Conread position: | 372-550 |
Cow position: | chrX:6563553-6563733 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 143 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 372-550 |
Cow position: | chrX:40789241-40789420 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 146 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 102, 49 |
Conread position: | 372-552 |
Cow position: | chrX:23414339-23414158 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 142 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 30, 75 |
Conread position: | 373-523 |
Cow position: | chrX:4446740-4446886 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 123 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 106, 113 |
Conread position: | 373-523 |
Cow position: | chrX:7497273-7497424 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 130 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 29, 82 |
Conread position: | 373-531 |
Cow position: | chrX:21664689-21664529 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 135 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 18, 141 |
Conread position: | 373-531 |
Cow position: | chrX:23179249-23179086 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 135 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 23, 114 |
Conread position: | 373-532 |
Cow position: | chrX:32431654-32431816 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 128 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 22, 89 |
Conread position: | 373-532 |
Cow position: | chrX:34355935-34355779 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 123 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 136, 41 |
Conread position: | 373-549 |
Cow position: | chrX:38999886-39000062 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 150 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 103, 28 |
Conread position: | 374-520 |
Cow position: | chrX:16419182-16419329 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 122 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 374-530 |
Cow position: | chrX:7425501-7425660 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 130 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 374-532 |
Cow position: | chrX:9539358-9539516 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 129 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 374-532 |
Cow position: | chrX:29874339-29874175 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 134 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 20, 91 |
Conread position: | 374-540 |
Cow position: | chrX:37760908-37761076 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 125 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 136, 69 |
Conread position: | 374-546 |
Cow position: | chrX:34470751-34470923 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 145 |
Alignm E-value: | 8.00141e-43 |
Alignm gaps (pig, cow): | 162, 12 |
Conread position: | 375-532 |
Cow position: | chrX:6203573-6203738 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 124 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 375-552 |
Cow position: | chrX:45980947-45981127 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 132 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 33, 140 |
Conread position: | 376-532 |
Cow position: | chrX:18417267-18417110 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 122 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 100, 0 |
Conread position: | 376-532 |
Cow position: | chrX:29675533-29675696 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 124 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 376-550 |
Cow position: | chrX:26619080-26618902 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 137 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 377-503 |
Cow position: | chrX:24747149-24747020 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 105 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 11, 39 |
Conread position: | 378-512 |
Cow position: | chrX:47744127-47744262 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 102 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 378-549 |
Cow position: | chrX:26940469-26940304 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 131 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 95, 39 |
Conread position: | 379-527 |
Cow position: | chrX:31340747-31340902 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 120 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 379-532 |
Cow position: | chrX:33585539-33585685 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 121 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 97, 18 |
Conread position: | 379-532 |
Cow position: | chrX:47178182-47178339 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 122 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 22, 65 |
Conread position: | 380-532 |
Cow position: | chrX:16514225-16514078 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 130 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 130, 88 |
Conread position: | 381-532 |
Cow position: | chrX:20377012-20377160 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 121 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 6, 71 |
Conread position: | 381-536 |
Cow position: | chrX:2300966-2301122 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 121 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 6, 127 |
Conread position: | 382-532 |
Cow position: | chrX:22326162-22326311 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 121 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 5, 126 |
Conread position: | 382-542 |
Cow position: | chrX:2648168-2648010 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 122 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 101, 129 |
Conread position: | 384-532 |
Cow position: | chrX:5046871-5046717 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 124 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 92, 0 |
Conread position: | 386-530 |
Cow position: | chrX:17952928-17952781 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 111 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 96, 0 |
Conread position: | 386-532 |
Cow position: | chrX:17964475-17964329 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 115 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 46, 127 |
Conread position: | 393-542 |
Cow position: | chrX:47866044-47865891 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 120 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 394-532 |
Cow position: | chrX:488734-488872 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 122 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 82, 48 |
Conread position: | 395-532 |
Cow position: | chrX:17895873-17895739 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 112 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 400-532 |
Cow position: | chrX:31273264-31273399 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 112 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 401-532 |
Cow position: | chrX:4545290-4545159 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 115 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 81, 28 |
Conread position: | 409-530 |
Cow position: | chrX:30069356-30069477 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 67, 87 |
Conread position: | 420-513 |
Cow position: | chrX:20344234-20344141 (view UCSC Genome Browser custom track) |
Alignm length: | 94 |
Alignm identity: | 79 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.