Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8058B20.5
        

               Conread position:
               1-110
               

               Cow position:
               chr29:14445069-14444960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-122
               

               Cow position:
               chr29:23983979-23983858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-138
               

               Cow position:
               chr29:20903309-20903177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1-139
               

               Cow position:
               chr29:36217091-36217226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               1-140
               

               Cow position:
               chr29:10156325-10156191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               1-142
               

               Cow position:
               chr29:5186517-5186376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-150
               

               Cow position:
               chr29:21285336-21285484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               1-155
               

               Cow position:
               chr29:23243901-23243748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               1-155
               

               Cow position:
               chr29:26559267-26559116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1-155
               

               Cow position:
               chr29:29314676-29314530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               1-204
               

               Cow position:
               chr29:22723577-22723777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 0
               

               Conread position:
               1-207
               

               Cow position:
               chr29:32197673-32197878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               1-210
               

               Cow position:
               chr29:39111335-39111137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               167
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               1-220
               

               Cow position:
               chr29:43328620-43328829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               1-221
               

               Cow position:
               chr29:31943842-31944064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               94, 217
               

               Conread position:
               1-221
               

               Cow position:
               chr29:35677568-35677343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               1-223
               

               Cow position:
               chr29:17109936-17110153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1-224
               

               Cow position:
               chr29:26778859-26779078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               60, 49
               

               Conread position:
               1-225
               

               Cow position:
               chr29:732597-732812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               1-225
               

               Cow position:
               chr29:19949285-19949507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 62
               

               Conread position:
               1-225
               

               Cow position:
               chr29:26615744-26615539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               1-225
               

               Cow position:
               chr29:35501678-35501463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               1-226
               

               Cow position:
               chr29:10058559-10058340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               1-227
               

               Cow position:
               chr29:34297593-34297365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               11, 140
               

               Conread position:
               1-227
               

               Cow position:
               chr29:44991447-44991221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               195, 43
               

               Conread position:
               1-228
               

               Cow position:
               chr29:36530843-36531071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               1-229
               

               Cow position:
               chr29:19762247-19762469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               176
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               1-230
               

               Cow position:
               chr29:21666063-21666293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               1-230
               

               Cow position:
               chr29:22735129-22734900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               132, 61
               

               Conread position:
               1-231
               

               Cow position:
               chr29:26602169-26602407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               41, 121
               

               Conread position:
               1-231
               

               Cow position:
               chr29:45005651-45005425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               168, 35
               

               Conread position:
               1-232
               

               Cow position:
               chr29:5831044-5830806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               123, 107
               

               Conread position:
               1-232
               

               Cow position:
               chr29:9709670-9709902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 141
               

               Conread position:
               1-232
               

               Cow position:
               chr29:17804511-17804739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               1-232
               

               Cow position:
               chr29:22167102-22166878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               1-232
               

               Cow position:
               chr29:29769375-29769146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 62
               

               Conread position:
               1-232
               

               Cow position:
               chr29:41112903-41112682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               1-232
               

               Cow position:
               chr29:43441517-43441295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               63, 49
               

               Conread position:
               1-238
               

               Cow position:
               chr29:22735474-22735232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               33, 117
               

               Conread position:
               1-242
               

               Cow position:
               chr29:40117548-40117784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               1-258
               

               Cow position:
               chr29:742673-742436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               1-267
               

               Cow position:
               chr29:3584134-3583875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               143, 41
               

               Conread position:
               1-286
               

               Cow position:
               chr29:7624155-7624428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               210
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               228, 78
               

               Conread position:
               3-152
               

               Cow position:
               chr29:34687813-34687962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-216
               

               Cow position:
               chr29:30681732-30681510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               137, 52
               

               Conread position:
               3-221
               

               Cow position:
               chr29:31200236-31200473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               3-221
               

               Cow position:
               chr29:36952318-36952114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               3-236
               

               Cow position:
               chr29:1614908-1615141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               222, 24
               

               Conread position:
               4-126
               

               Cow position:
               chr29:18012537-18012659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-126
               

               Cow position:
               chr29:24578842-24578964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-126
               

               Cow position:
               chr29:27329872-27329993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               4-207
               

               Cow position:
               chr29:29324441-29324236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               170
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               133, 58
               

               Conread position:
               4-208
               

               Cow position:
               chr29:30548755-30548958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               132, 190
               

               Conread position:
               4-221
               

               Cow position:
               chr29:31674612-31674829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-225
               

               Cow position:
               chr29:12680135-12680360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               4-227
               

               Cow position:
               chr29:25737435-25737216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 156
               

               Conread position:
               4-236
               

               Cow position:
               chr29:22613409-22613634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               5-126
               

               Cow position:
               chr29:5098786-5098665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-207
               

               Cow position:
               chr29:23115021-23114816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               137, 111
               

               Conread position:
               5-226
               

               Cow position:
               chr29:27835293-27835521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               26, 108
               

               Conread position:
               5-227
               

               Cow position:
               chr29:5568469-5568698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               5-243
               

               Cow position:
               chr29:6686653-6686431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               6-227
               

               Cow position:
               chr29:23577807-23577578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               103, 185
               

               Conread position:
               6-246
               

               Cow position:
               chr29:4520321-4520550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               7-142
               

               Cow position:
               chr29:43251185-43251048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               7-143
               

               Cow position:
               chr29:29176633-29176499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               7-150
               

               Cow position:
               chr29:683508-683367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               43, 38
               

               Conread position:
               7-150
               

               Cow position:
               chr29:11527807-11527667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               7-151
               

               Cow position:
               chr29:6286179-6286035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-152
               

               Cow position:
               chr29:5210474-5210618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               7-154
               

               Cow position:
               chr29:7103540-7103687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-155
               

               Cow position:
               chr29:16365907-16365755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               7-155
               

               Cow position:
               chr29:40299038-40298890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-165
               

               Cow position:
               chr29:13373279-13373442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               7-166
               

               Cow position:
               chr29:12625994-12625834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               131, 137
               

               Conread position:
               7-192
               

               Cow position:
               chr29:87029-86835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               126, 109
               

               Conread position:
               7-203
               

               Cow position:
               chr29:38581955-38582150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               133, 28
               

               Conread position:
               7-204
               

               Cow position:
               chr29:17154761-17154943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               7-211
               

               Cow position:
               chr29:4423457-4423262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               7-213
               

               Cow position:
               chr29:21443356-21443151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               135, 184
               

               Conread position:
               7-215
               

               Cow position:
               chr29:5789011-5789207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               7-217
               

               Cow position:
               chr29:4085295-4085490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               7-217
               

               Cow position:
               chr29:24952670-24952881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               129, 80
               

               Conread position:
               7-217
               

               Cow position:
               chr29:31928971-31929180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 73
               

               Conread position:
               7-219
               

               Cow position:
               chr29:1011598-1011397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               142, 55
               

               Conread position:
               7-219
               

               Cow position:
               chr29:7956008-7955792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               131, 89
               

               Conread position:
               7-219
               

               Cow position:
               chr29:24188083-24187867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               7-220
               

               Cow position:
               chr29:12783978-12783758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               131, 55
               

               Conread position:
               7-220
               

               Cow position:
               chr29:17222395-17222613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               113, 170
               

               Conread position:
               7-220
               

               Cow position:
               chr29:28066473-28066677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               133, 54
               

               Conread position:
               7-221
               

               Cow position:
               chr29:1325425-1325644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               132, 41
               

               Conread position:
               7-221
               

               Cow position:
               chr29:5409159-5408944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               139, 104
               

               Conread position:
               7-221
               

               Cow position:
               chr29:28195533-28195335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               7-221
               

               Cow position:
               chr29:28979516-28979318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               7-221
               

               Cow position:
               chr29:30227293-30227082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               133, 34
               

               Conread position:
               7-221
               

               Cow position:
               chr29:35258967-35259179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               141, 180
               

               Conread position:
               7-222
               

               Cow position:
               chr29:396395-396601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               7-222
               

               Cow position:
               chr29:5520503-5520285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               7-222
               

               Cow position:
               chr29:38858231-38858013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               133, 110
               

               Conread position:
               7-222
               

               Cow position:
               chr29:40994908-40994680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               142, 64
               

               Conread position:
               7-222
               

               Cow position:
               chr29:43544620-43544406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               7-224
               

               Cow position:
               chr29:40583775-40583986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               131, 45
               

               Conread position:
               7-225
               

               Cow position:
               chr29:9378619-9378837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-226
               

               Cow position:
               chr29:2744285-2744064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               133, 105
               

               Conread position:
               7-226
               

               Cow position:
               chr29:27911575-27911796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               135, 41
               

               Conread position:
               7-226
               

               Cow position:
               chr29:38580962-38581195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               129, 61
               

               Conread position:
               7-227
               

               Cow position:
               chr29:16609730-16609956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               7-227
               

               Cow position:
               chr29:31092433-31092653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               135, 41
               

               Conread position:
               7-227
               

               Cow position:
               chr29:32733281-32733506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               187, 109
               

               Conread position:
               7-228
               

               Cow position:
               chr29:1022278-1022499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               163, 119
               

               Conread position:
               7-228
               

               Cow position:
               chr29:25474905-25475138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               7-228
               

               Cow position:
               chr29:28993840-28994061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               17, 146
               

               Conread position:
               7-230
               

               Cow position:
               chr29:19250328-19250549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               89, 55
               

               Conread position:
               7-230
               

               Cow position:
               chr29:32307569-32307358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               7-230
               

               Cow position:
               chr29:33321333-33321559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               60, 41
               

               Conread position:
               7-231
               

               Cow position:
               chr29:109677-109878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               7-231
               

               Cow position:
               chr29:16290708-16290931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               115, 109
               

               Conread position:
               7-231
               

               Cow position:
               chr29:23825652-23825871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               43, 139
               

               Conread position:
               7-231
               

               Cow position:
               chr29:24624232-24624449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               118, 28
               

               Conread position:
               7-231
               

               Cow position:
               chr29:35458789-35458559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               113, 65
               

               Conread position:
               7-231
               

               Cow position:
               chr29:40791292-40791504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               7-232
               

               Cow position:
               chr29:1007804-1008031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               201, 21
               

               Conread position:
               7-232
               

               Cow position:
               chr29:17462803-17462568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               30, 99
               

               Conread position:
               7-232
               

               Cow position:
               chr29:31934361-31934584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               7-232
               

               Cow position:
               chr29:34832403-34832183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               156, 41
               

               Conread position:
               7-232
               

               Cow position:
               chr29:38348049-38347816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               8, 98
               

               Conread position:
               7-233
               

               Cow position:
               chr29:41530832-41531063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 111
               

               Conread position:
               7-234
               

               Cow position:
               chr29:3685537-3685310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               61, 77
               

               Conread position:
               7-234
               

               Cow position:
               chr29:19756414-19756648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               48, 96
               

               Conread position:
               7-235
               

               Cow position:
               chr29:27668678-27668436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               7-235
               

               Cow position:
               chr29:32656415-32656652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               95, 100
               

               Conread position:
               7-236
               

               Cow position:
               chr29:20626549-20626783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               123, 109
               

               Conread position:
               7-236
               

               Cow position:
               chr29:22720669-22720433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               53, 81
               

               Conread position:
               7-236
               

               Cow position:
               chr29:23874442-23874677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               7-236
               

               Cow position:
               chr29:31981813-31982034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               7-236
               

               Cow position:
               chr29:35292074-35292301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               58, 127
               

               Conread position:
               7-236
               

               Cow position:
               chr29:38754957-38754723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               7-236
               

               Cow position:
               chr29:42630103-42630332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               135, 112
               

               Conread position:
               7-237
               

               Cow position:
               chr29:4070610-4070835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               209, 41
               

               Conread position:
               7-237
               

               Cow position:
               chr29:8292935-8292700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               93, 34
               

               Conread position:
               7-237
               

               Cow position:
               chr29:20770329-20770557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               159, 55
               

               Conread position:
               7-241
               

               Cow position:
               chr29:5995112-5994871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               73, 52
               

               Conread position:
               7-246
               

               Cow position:
               chr29:12025485-12025255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               141, 41
               

               Conread position:
               7-252
               

               Cow position:
               chr29:11434101-11434339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               7-252
               

               Cow position:
               chr29:28813998-28813744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               35, 117
               

               Conread position:
               7-254
               

               Cow position:
               chr29:5046635-5046886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               124, 188
               

               Conread position:
               7-258
               

               Cow position:
               chr29:5769775-5770029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               54, 100
               

               Conread position:
               7-258
               

               Cow position:
               chr29:11647077-11647322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               203, 14
               

               Conread position:
               7-264
               

               Cow position:
               chr29:44684085-44684340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               136, 17
               

               Conread position:
               8-155
               

               Cow position:
               chr29:32211083-32210941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               8-165
               

               Cow position:
               chr29:38978515-38978671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               135, 82
               

               Conread position:
               8-166
               

               Cow position:
               chr29:1556915-1557072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               8-204
               

               Cow position:
               chr29:23825227-23825031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-220
               

               Cow position:
               chr29:23813056-23812851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               117, 108
               

               Conread position:
               8-221
               

               Cow position:
               chr29:21196668-21196454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               24, 136
               

               Conread position:
               8-221
               

               Cow position:
               chr29:22690208-22690425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               121, 108
               

               Conread position:
               8-221
               

               Cow position:
               chr29:35084239-35084025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               130, 176
               

               Conread position:
               8-222
               

               Cow position:
               chr29:5892828-5893045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               172
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               134, 188
               

               Conread position:
               8-223
               

               Cow position:
               chr29:22032658-22032447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               83, 16
               

               Conread position:
               8-224
               

               Cow position:
               chr29:18450153-18449937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               128, 16
               

               Conread position:
               8-224
               

               Cow position:
               chr29:43099762-43099547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               123, 108
               

               Conread position:
               8-226
               

               Cow position:
               chr29:8926478-8926247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               132, 197
               

               Conread position:
               8-228
               

               Cow position:
               chr29:6636068-6636284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               69, 13
               

               Conread position:
               8-228
               

               Cow position:
               chr29:36220517-36220748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               8-229
               

               Cow position:
               chr29:15947150-15947375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               8-232
               

               Cow position:
               chr29:22068757-22068532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               132, 92
               

               Conread position:
               8-232
               

               Cow position:
               chr29:22162266-22162055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               8-232
               

               Cow position:
               chr29:28840139-28840383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               8-232
               

               Cow position:
               chr29:34773754-34773539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               88, 125
               

               Conread position:
               8-232
               

               Cow position:
               chr29:39038286-39038057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               8-233
               

               Cow position:
               chr29:20167407-20167633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               122, 180
               

               Conread position:
               8-236
               

               Cow position:
               chr29:34358995-34358766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 158
               

               Conread position:
               8-247
               

               Cow position:
               chr29:21592691-21592921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               94, 54
               

               Conread position:
               8-250
               

               Cow position:
               chr29:2623496-2623250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               107, 82
               

               Conread position:
               8-252
               

               Cow position:
               chr29:25944320-25944062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               9-143
               

               Cow position:
               chr29:4002875-4003010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               9-149
               

               Cow position:
               chr29:847658-847518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               67, 28
               

               Conread position:
               9-150
               

               Cow position:
               chr29:40873995-40874137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               9-154
               

               Cow position:
               chr29:18085556-18085703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               9-157
               

               Cow position:
               chr29:28166234-28166090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               9-171
               

               Cow position:
               chr29:7966230-7966393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               9-188
               

               Cow position:
               chr29:32176664-32176833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               9-191
               

               Cow position:
               chr29:12900567-12900382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               133, 75
               

               Conread position:
               9-192
               

               Cow position:
               chr29:3100283-3100096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               9-198
               

               Cow position:
               chr29:29974030-29973838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               105, 23
               

               Conread position:
               9-202
               

               Cow position:
               chr29:24045980-24046177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               115, 99
               

               Conread position:
               9-208
               

               Cow position:
               chr29:36632876-36632675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               22, 5
               

               Conread position:
               9-221
               

               Cow position:
               chr29:4874899-4874692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               171
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               29, 89
               

               Conread position:
               9-221
               

               Cow position:
               chr29:5063129-5063341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 135
               

               Conread position:
               9-221
               

               Cow position:
               chr29:14501577-14501793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               111, 99
               

               Conread position:
               9-221
               

               Cow position:
               chr29:20910707-20910492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               118, 26
               

               Conread position:
               9-221
               

               Cow position:
               chr29:25814852-25814637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               133, 55
               

               Conread position:
               9-222
               

               Cow position:
               chr29:23155212-23155434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               175
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               119, 29
               

               Conread position:
               9-224
               

               Cow position:
               chr29:26477526-26477745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 209
               

               Conread position:
               9-225
               

               Cow position:
               chr29:17297120-17297340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               171
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               117, 107
               

               Conread position:
               9-226
               

               Cow position:
               chr29:16272726-16272949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               9-227
               

               Cow position:
               chr29:1933587-1933364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               134, 173
               

               Conread position:
               9-227
               

               Cow position:
               chr29:18200768-18200989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               118, 66
               

               Conread position:
               9-227
               

               Cow position:
               chr29:25874487-25874263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               9-227
               

               Cow position:
               chr29:30097297-30097087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               210, 102
               

               Conread position:
               9-227
               

               Cow position:
               chr29:30827390-30827612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               9-228
               

               Cow position:
               chr29:4492422-4492639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               210, 18
               

               Conread position:
               9-231
               

               Cow position:
               chr29:3549587-3549813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               9-231
               

               Cow position:
               chr29:42364033-42363812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               17, 109
               

               Conread position:
               9-232
               

               Cow position:
               chr29:28420740-28420968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               133, 52
               

               Conread position:
               9-232
               

               Cow position:
               chr29:30294881-30294659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               134, 50
               

               Conread position:
               9-234
               

               Cow position:
               chr29:33511745-33511515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               9-237
               

               Cow position:
               chr29:16200494-16200260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               177
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               9-237
               

               Cow position:
               chr29:36249021-36249255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               123, 99
               

               Conread position:
               9-237
               

               Cow position:
               chr29:36522375-36522134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               119, 99
               

               Conread position:
               9-240
               

               Cow position:
               chr29:23876850-23876614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               111, 98
               

               Conread position:
               9-241
               

               Cow position:
               chr29:20527179-20526941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               133, 63
               

               Conread position:
               9-242
               

               Cow position:
               chr29:29588942-29588704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               123, 99
               

               Conread position:
               9-251
               

               Cow position:
               chr29:4625012-4624770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               133, 49
               

               Conread position:
               9-273
               

               Cow position:
               chr29:32894247-32894505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               113, 107
               

               Conread position:
               10-126
               

               Cow position:
               chr29:30918534-30918650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-148
               

               Cow position:
               chr29:39329618-39329480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-168
               

               Cow position:
               chr29:11053874-11053719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               10-191
               

               Cow position:
               chr29:24051396-24051210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               132, 74
               

               Conread position:
               10-216
               

               Cow position:
               chr29:30440919-30441132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               40, 100
               

               Conread position:
               10-216
               

               Cow position:
               chr29:43183328-43183125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               10-219
               

               Cow position:
               chr29:34745672-34745465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               128, 19
               

               Conread position:
               10-221
               

               Cow position:
               chr29:21645303-21645515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               145, 38
               

               Conread position:
               10-221
               

               Cow position:
               chr29:37438150-37437935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               119, 98
               

               Conread position:
               10-223
               

               Cow position:
               chr29:36357114-36357328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 47
               

               Conread position:
               10-225
               

               Cow position:
               chr29:34359835-34359622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               198, 25
               

               Conread position:
               10-226
               

               Cow position:
               chr29:38980089-38979877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               167
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               34, 108
               

               Conread position:
               10-227
               

               Cow position:
               chr29:7310662-7310867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               10-227
               

               Cow position:
               chr29:16278973-16279181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               172
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               10-227
               

               Cow position:
               chr29:26017519-26017295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               10-227
               

               Cow position:
               chr29:37618290-37618514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               10-247
               

               Cow position:
               chr29:16652135-16652385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               32, 111
               

               Conread position:
               10-249
               

               Cow position:
               chr29:26275595-26275828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               232, 52
               

               Conread position:
               10-251
               

               Cow position:
               chr29:25092099-25092329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               10-252
               

               Cow position:
               chr29:4120839-4121085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               10-264
               

               Cow position:
               chr29:9310585-9310843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               188
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               133, 214
               

               Conread position:
               11-154
               

               Cow position:
               chr29:6844646-6844503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               45, 18
               

               Conread position:
               11-202
               

               Cow position:
               chr29:27524849-27524654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               11-204
               

               Cow position:
               chr29:19253843-19253648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               131, 161
               

               Conread position:
               11-209
               

               Cow position:
               chr29:40633629-40633839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               11-214
               

               Cow position:
               chr29:2263006-2262790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               129, 54
               

               Conread position:
               11-215
               

               Cow position:
               chr29:44139257-44139053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               122, 77
               

               Conread position:
               11-218
               

               Cow position:
               chr29:3292934-3293138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               11-221
               

               Cow position:
               chr29:26540554-26540342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               11-222
               

               Cow position:
               chr29:7290762-7290969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               198, 129
               

               Conread position:
               11-226
               

               Cow position:
               chr29:23697963-23698173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               51, 119
               

               Conread position:
               11-227
               

               Cow position:
               chr29:23844824-23845046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               11-228
               

               Cow position:
               chr29:29057165-29057384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               127, 37
               

               Conread position:
               11-231
               

               Cow position:
               chr29:29475270-29475043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               11-232
               

               Cow position:
               chr29:29923587-29923366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               122, 42
               

               Conread position:
               11-232
               

               Cow position:
               chr29:31651397-31651611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               176
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               58, 101
               

               Conread position:
               11-236
               

               Cow position:
               chr29:8163841-8163612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               131, 23
               

               Conread position:
               11-236
               

               Cow position:
               chr29:13028430-13028663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               180
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               135, 36
               

               Conread position:
               11-236
               

               Cow position:
               chr29:28197020-28196807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               11-237
               

               Cow position:
               chr29:11915813-11916035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               146, 37
               

               Conread position:
               11-237
               

               Cow position:
               chr29:22519141-22518906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               79, 92
               

               Conread position:
               11-238
               

               Cow position:
               chr29:29308586-29308367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               178
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               10, 120
               

               Conread position:
               12-131
               

               Cow position:
               chr29:27873588-27873707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-211
               

               Cow position:
               chr29:4053353-4053156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               12-224
               

               Cow position:
               chr29:28775472-28775265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               131, 36
               

               Conread position:
               12-224
               

               Cow position:
               chr29:32963536-32963724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               12-229
               

               Cow position:
               chr29:36781317-36781104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               12-230
               

               Cow position:
               chr29:21933134-21932914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               130, 160
               

               Conread position:
               13-228
               

               Cow position:
               chr29:36210134-36210355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               130, 56
               

               Conread position:
               13-232
               

               Cow position:
               chr29:6337651-6337859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               13-249
               

               Cow position:
               chr29:5953871-5953631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               127, 221
               

               Conread position:
               14-224
               

               Cow position:
               chr29:19363700-19363909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               14-232
               

               Cow position:
               chr29:27683963-27683756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               14-236
               

               Cow position:
               chr29:22175670-22175901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               133, 216
               

               Conread position:
               15-221
               

               Cow position:
               chr29:32656102-32655896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               64, 132
               

               Conread position:
               15-226
               

               Cow position:
               chr29:22028964-22028758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               168
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               15, 49
               

               Conread position:
               15-227
               

               Cow position:
               chr29:28478317-28478538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               15-232
               

               Cow position:
               chr29:22729558-22729775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 38
               

               Conread position:
               16-217
               

               Cow position:
               chr29:8125368-8125165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               46, 113
               

               Conread position:
               16-218
               

               Cow position:
               chr29:7954976-7954769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               76, 46
               

               Conread position:
               16-221
               

               Cow position:
               chr29:19176922-19176717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               66, 147
               

               Conread position:
               16-232
               

               Cow position:
               chr29:38396350-38396574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               7, 178
               

               Conread position:
               17-206
               

               Cow position:
               chr29:34760421-34760236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               17-224
               

               Cow position:
               chr29:19125314-19125531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               17-237
               

               Cow position:
               chr29:23637686-23637458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               18-210
               

               Cow position:
               chr29:23913400-23913210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               104, 94
               

               Conread position:
               18-224
               

               Cow position:
               chr29:17236433-17236623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               19-142
               

               Cow position:
               chr29:19244465-19244341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               19-221
               

               Cow position:
               chr29:31489313-31489522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               20-204
               

               Cow position:
               chr29:2135522-2135347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               20-213
               

               Cow position:
               chr29:22335234-22335035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               121, 157
               

               Conread position:
               20-217
               

               Cow position:
               chr29:15796481-15796678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               130, 46
               

               Conread position:
               20-223
               

               Cow position:
               chr29:15797947-15798151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               165
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               130, 174
               

               Conread position:
               20-227
               

               Cow position:
               chr29:14746777-14746984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               197, 11
               

               Conread position:
               22-242
               

               Cow position:
               chr29:25793142-25793364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               5, 72
               

               Conread position:
               24-221
               

               Cow position:
               chr29:2730287-2730083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               96, 28
               

               Conread position:
               24-226
               

               Cow position:
               chr29:19420614-19420417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               24-228
               

               Cow position:
               chr29:16657698-16657896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               25-217
               

               Cow position:
               chr29:8634654-8634846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               115, 143
               

               Conread position:
               25-221
               

               Cow position:
               chr29:26631045-26631247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               112, 19
               

               Conread position:
               25-222
               

               Cow position:
               chr29:629538-629736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               144, 119
               

               Conread position:
               25-228
               

               Cow position:
               chr29:18878481-18878280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               117, 169
               

               Conread position:
               25-252
               

               Cow position:
               chr29:12647961-12648193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               117, 89
               

               Conread position:
               25-252
               

               Cow position:
               chr29:14576859-14577086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               25-259
               

               Cow position:
               chr29:3711379-3711617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               118, 67
               

               Conread position:
               25-330
               

               Cow position:
               chr29:32713161-32713470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               45, 83
               

               Conread position:
               26-221
               

               Cow position:
               chr29:24026695-24026900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               92, 18
               

               Conread position:
               26-222
               

               Cow position:
               chr29:40351074-40350882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               155
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               26-226
               

               Cow position:
               chr29:43088312-43088509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               26-230
               

               Cow position:
               chr29:12890686-12890883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               26-238
               

               Cow position:
               chr29:27811968-27812176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               42, 14
               

               Conread position:
               27-222
               

               Cow position:
               chr29:36697759-36697956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               100, 161
               

               Conread position:
               27-228
               

               Cow position:
               chr29:5064784-5064969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               28-207
               

               Cow position:
               chr29:24365893-24365713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               112, 34
               

               Conread position:
               28-222
               

               Cow position:
               chr29:19187029-19187225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               28-236
               

               Cow position:
               chr29:4441202-4440991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               164
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               23, 76
               

               Conread position:
               29-216
               

               Cow position:
               chr29:14227561-14227749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               31, 100
               

               Conread position:
               29-227
               

               Cow position:
               chr29:21018742-21018538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               89, 93
               

               Conread position:
               29-233
               

               Cow position:
               chr29:685169-684967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               113, 66
               

               Conread position:
               29-242
               

               Cow position:
               chr29:26211056-26211273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               116, 101
               

               Conread position:
               29-252
               

               Cow position:
               chr29:29578969-29578738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               102, 79
               

               Conread position:
               29-261
               

               Cow position:
               chr29:32799707-32799460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               112, 32
               

               Conread position:
               30-200
               

               Cow position:
               chr29:11116656-11116486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               85, 80
               

               Conread position:
               30-232
               

               Cow position:
               chr29:17436756-17436956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               110, 56
               

               Conread position:
               31-217
               

               Cow position:
               chr29:26539241-26539425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               31-232
               

               Cow position:
               chr29:8190194-8190007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               31-232
               

               Cow position:
               chr29:32215713-32215913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 137
               

               Conread position:
               31-236
               

               Cow position:
               chr29:14375875-14375664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               32-143
               

               Cow position:
               chr29:4328455-4328567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               32-155
               

               Cow position:
               chr29:17022157-17022280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               32-225
               

               Cow position:
               chr29:7444054-7443865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               32-233
               

               Cow position:
               chr29:25288916-25288707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               109, 53
               

               Conread position:
               33-156
               

               Cow position:
               chr29:18579827-18579708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               33-222
               

               Cow position:
               chr29:9622684-9622509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               33-227
               

               Cow position:
               chr29:13558341-13558543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               34-221
               

               Cow position:
               chr29:4648200-4648014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               106, 154
               

               Conread position:
               34-228
               

               Cow position:
               chr29:22991304-22991496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               52, 43
               

               Conread position:
               34-236
               

               Cow position:
               chr29:9800659-9800877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               67, 53
               

               Conread position:
               35-176
               

               Cow position:
               chr29:5652950-5653095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               35-210
               

               Cow position:
               chr29:30206863-30206692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               22, 81
               

               Conread position:
               35-237
               

               Cow position:
               chr29:25432464-25432670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               102, 15
               

               Conread position:
               36-232
               

               Cow position:
               chr29:44901650-44901451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               53, 17
               

               Conread position:
               36-234
               

               Cow position:
               chr29:8799004-8798798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               105, 176
               

               Conread position:
               36-237
               

               Cow position:
               chr29:34669056-34668853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               93, 12
               

               Conread position:
               37-220
               

               Cow position:
               chr29:35737315-35737120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 168
               

               Conread position:
               38-225
               

               Cow position:
               chr29:39638855-39639042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               12, 80
               

               Conread position:
               39-209
               

               Cow position:
               chr29:22127884-22128050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               41-206
               

               Cow position:
               chr29:33393694-33393871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               41-225
               

               Cow position:
               chr29:28948990-28949187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               106, 23
               

               Conread position:
               41-227
               

               Cow position:
               chr29:4023020-4023200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               41-228
               

               Cow position:
               chr29:20592132-20592323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               76, 67
               

               Conread position:
               41-232
               

               Cow position:
               chr29:22577163-22576967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               41-252
               

               Cow position:
               chr29:23142319-23142105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               10, 198
               

               Conread position:
               41-253
               

               Cow position:
               chr29:3538660-3538461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               42-219
               

               Cow position:
               chr29:40763677-40763500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               42-221
               

               Cow position:
               chr29:34274359-34274176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               85, 16
               

               Conread position:
               43-232
               

               Cow position:
               chr29:24065704-24065894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               84, 73
               

               Conread position:
               44-237
               

               Cow position:
               chr29:10818431-10818246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               45-223
               

               Cow position:
               chr29:44981603-44981434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               45-232
               

               Cow position:
               chr29:936227-936414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               154
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               178, 100
               

               Conread position:
               45-232
               

               Cow position:
               chr29:35071064-35070864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               100, 161
               

               Conread position:
               45-288
               

               Cow position:
               chr29:23819370-23819120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               78, 71
               

               Conread position:
               46-230
               

               Cow position:
               chr29:17282089-17282267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               47-222
               

               Cow position:
               chr29:27929791-27929964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               101, 8
               

               Conread position:
               47-222
               

               Cow position:
               chr29:31107489-31107661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               47-224
               

               Cow position:
               chr29:19741864-19742032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               47-237
               

               Cow position:
               chr29:31080183-31080377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               101, 6
               

               Conread position:
               48-226
               

               Cow position:
               chr29:35189630-35189814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               48-227
               

               Cow position:
               chr29:11685187-11685375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               48-230
               

               Cow position:
               chr29:24660710-24660884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               48-233
               

               Cow position:
               chr29:16735247-16735436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               48-240
               

               Cow position:
               chr29:12440804-12440979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               141, 55
               

               Conread position:
               51-236
               

               Cow position:
               chr29:42646076-42646262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               51-236
               

               Cow position:
               chr29:42797982-42798168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               52-201
               

               Cow position:
               chr29:28257168-28257320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               104, 88
               

               Conread position:
               52-217
               

               Cow position:
               chr29:10653359-10653516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               52-222
               

               Cow position:
               chr29:27997223-27997049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               88, 69
               

               Conread position:
               52-224
               

               Cow position:
               chr29:22652350-22652520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               52-226
               

               Cow position:
               chr29:10203799-10203972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               52-229
               

               Cow position:
               chr29:1959919-1959749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               52-234
               

               Cow position:
               chr29:11894725-11894911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               49, 53
               

               Conread position:
               52-237
               

               Cow position:
               chr29:11081369-11081181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               91, 175
               

               Conread position:
               53-192
               

               Cow position:
               chr29:34688878-34688741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               53-213
               

               Cow position:
               chr29:17663733-17663568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               98, 131
               

               Conread position:
               53-214
               

               Cow position:
               chr29:934949-935117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               103, 73
               

               Conread position:
               53-220
               

               Cow position:
               chr29:16561742-16561577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               132, 50
               

               Conread position:
               53-222
               

               Cow position:
               chr29:27961939-27961765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               95, 68
               

               Conread position:
               53-224
               

               Cow position:
               chr29:18748362-18748186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               53-272
               

               Cow position:
               chr29:27042300-27042515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               87, 140
               

               Conread position:
               54-217
               

               Cow position:
               chr29:30743687-30743516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               86, 39
               

               Conread position:
               55-227
               

               Cow position:
               chr29:2219417-2219592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               55-228
               

               Cow position:
               chr29:21542208-21542044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               55-236
               

               Cow position:
               chr29:17718992-17718819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               15, 69
               

               Conread position:
               55-237
               

               Cow position:
               chr29:6774871-6774694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               170, 132
               

               Conread position:
               55-241
               

               Cow position:
               chr29:38732183-38732372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               85, 173
               

               Conread position:
               56-203
               

               Cow position:
               chr29:41223196-41223344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               72, 42
               

               Conread position:
               56-226
               

               Cow position:
               chr29:10192009-10191842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               9, 102
               

               Conread position:
               56-236
               

               Cow position:
               chr29:14761485-14761660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               106, 84
               

               Conread position:
               57-217
               

               Cow position:
               chr29:13063891-13064044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               57-237
               

               Cow position:
               chr29:33143322-33143145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               58-227
               

               Cow position:
               chr29:37990966-37990783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               58-241
               

               Cow position:
               chr29:23678742-23678919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               65, 71
               

               Conread position:
               59-217
               

               Cow position:
               chr29:37293070-37293221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               59-217
               

               Cow position:
               chr29:41422877-41422715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               59-219
               

               Cow position:
               chr29:42404981-42405145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               59-228
               

               Cow position:
               chr29:43311514-43311337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               59-232
               

               Cow position:
               chr29:7414535-7414703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               18, 112
               

               Conread position:
               59-232
               

               Cow position:
               chr29:14828194-14828018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               83, 61
               

               Conread position:
               62-228
               

               Cow position:
               chr29:7040835-7040663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               62-232
               

               Cow position:
               chr29:24604933-24605105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               62-236
               

               Cow position:
               chr29:22019150-22018972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               64-225
               

               Cow position:
               chr29:30920364-30920198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               78, 120
               

               Conread position:
               64-237
               

               Cow position:
               chr29:25981963-25981787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               23, 8
               

               Conread position:
               65-232
               

               Cow position:
               chr29:18605620-18605460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               92, 44
               

               Conread position:
               66-243
               

               Cow position:
               chr29:23735048-23734867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               5, 175
               

               Conread position:
               68-231
               

               Cow position:
               chr29:29296437-29296596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               69-221
               

               Cow position:
               chr29:40112426-40112577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               69-227
               

               Cow position:
               chr29:22776123-22776280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               69-237
               

               Cow position:
               chr29:42849482-42849659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               49, 170
               

               Conread position:
               71-241
               

               Cow position:
               chr29:36546736-36546563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               72-207
               

               Cow position:
               chr29:7143342-7143483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               73-222
               

               Cow position:
               chr29:10994560-10994710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               74-231
               

               Cow position:
               chr29:24119451-24119288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               78-232
               

               Cow position:
               chr29:22736416-22736563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               81-221
               

               Cow position:
               chr29:25669150-25669281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               81-253
               

               Cow position:
               chr29:44985328-44985489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               162, 12
               

               Conread position:
               82-206
               

               Cow position:
               chr29:42875664-42875543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               82-230
               

               Cow position:
               chr29:31594089-31593950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               82-232
               

               Cow position:
               chr29:4741334-4741178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               83-241
               

               Cow position:
               chr29:10838999-10839157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               87-212
               

               Cow position:
               chr29:10638544-10638416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               41, 99
               

               Conread position:
               87-226
               

               Cow position:
               chr29:11887330-11887464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               87-227
               

               Cow position:
               chr29:33551103-33550969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               89-224
               

               Cow position:
               chr29:38010509-38010646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               90-229
               

               Cow position:
               chr29:19742541-19742679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               43, 23
               

               Conread position:
               92-231
               

               Cow position:
               chr29:22705102-22705253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               94-226
               

               Cow position:
               chr29:659351-659484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               96-217
               

               Cow position:
               chr29:10658445-10658324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               96-236
               

               Cow position:
               chr29:20529009-20529148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               33, 127
               

               Conread position:
               97-225
               

               Cow position:
               chr29:31378164-31378286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               13, 48
               

               Conread position:
               97-246
               

               Cow position:
               chr29:570767-570622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               105-232
               

               Cow position:
               chr29:34919379-34919253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 87
               

               Conread position:
               109-220
               

               Cow position:
               chr29:14442999-14442891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               109-220
               

               Cow position:
               chr29:28726912-28727021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               114-232
               

               Cow position:
               chr29:31835361-31835477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               116-232
               

               Cow position:
               chr29:35485671-35485786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 30
               

               Conread position:
               120-224
               

               Cow position:
               chr29:8841350-8841248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               120-225
               

               Cow position:
               chr29:7452336-7452443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               121-236
               

               Cow position:
               chr29:7438964-7438848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               134-232
               

               Cow position:
               chr29:1124720-1124819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               83
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               139-232
               

               Cow position:
               chr29:29176248-29176154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               139-241
               

               Cow position:
               chr29:44682017-44681913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               7, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-110
Cow position:	chr29:14445069-14444960 (view UCSC Genome Browser custom track)
Alignm length:	110
Alignm identity:	87
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	0, 0
Conread position:	1-122
Cow position:	chr29:23983979-23983858 (view UCSC Genome Browser custom track)
Alignm length:	122
Alignm identity:	95
Alignm E-value:	4e-23
Alignm gaps (pig, cow):	0, 0
Conread position:	1-138
Cow position:	chr29:20903309-20903177 (view UCSC Genome Browser custom track)
Alignm length:	138
Alignm identity:	104
Alignm E-value:	4e-21
Alignm gaps (pig, cow):	23, 0
Conread position:	1-139
Cow position:	chr29:36217091-36217226 (view UCSC Genome Browser custom track)
Alignm length:	139
Alignm identity:	110
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	56, 0
Conread position:	1-140
Cow position:	chr29:10156325-10156191 (view UCSC Genome Browser custom track)
Alignm length:	140
Alignm identity:	109
Alignm E-value:	5e-24
Alignm gaps (pig, cow):	40, 0
Conread position:	1-142
Cow position:	chr29:5186517-5186376 (view UCSC Genome Browser custom track)
Alignm length:	142
Alignm identity:	111
Alignm E-value:	8e-29
Alignm gaps (pig, cow):	0, 0
Conread position:	1-150
Cow position:	chr29:21285336-21285484 (view UCSC Genome Browser custom track)
Alignm length:	150
Alignm identity:	113
Alignm E-value:	6e-26
Alignm gaps (pig, cow):	79, 0
Conread position:	1-155
Cow position:	chr29:23243901-23243748 (view UCSC Genome Browser custom track)
Alignm length:	155
Alignm identity:	121
Alignm E-value:	3e-31
Alignm gaps (pig, cow):	16, 0
Conread position:	1-204
Cow position:	chr29:22723577-22723777 (view UCSC Genome Browser custom track)
Alignm length:	204
Alignm identity:	168
Alignm E-value:	0
Alignm gaps (pig, cow):	189, 0
Conread position:	1-207
Cow position:	chr29:32197673-32197878 (view UCSC Genome Browser custom track)
Alignm length:	207
Alignm identity:	154
Alignm E-value:	7e-38
Alignm gaps (pig, cow):	131, 0
Conread position:	1-210
Cow position:	chr29:39111335-39111137 (view UCSC Genome Browser custom track)
Alignm length:	210
Alignm identity:	167
Alignm E-value:	3.99931e-42
Alignm gaps (pig, cow):	88, 0
Conread position:	1-220
Cow position:	chr29:43328620-43328829 (view UCSC Genome Browser custom track)
Alignm length:	220
Alignm identity:	155
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	132, 0
Conread position:	1-221
Cow position:	chr29:31943842-31944064 (view UCSC Genome Browser custom track)
Alignm length:	225
Alignm identity:	166
Alignm E-value:	6e-37
Alignm gaps (pig, cow):	94, 217
Conread position:	1-223
Cow position:	chr29:17109936-17110153 (view UCSC Genome Browser custom track)
Alignm length:	223
Alignm identity:	184
Alignm E-value:	0
Alignm gaps (pig, cow):	61, 0
Conread position:	1-224
Cow position:	chr29:26778859-26779078 (view UCSC Genome Browser custom track)
Alignm length:	226
Alignm identity:	166
Alignm E-value:	5e-35
Alignm gaps (pig, cow):	60, 49
Conread position:	1-225
Cow position:	chr29:732597-732812 (view UCSC Genome Browser custom track)
Alignm length:	225
Alignm identity:	175
Alignm E-value:	1.00053e-42
Alignm gaps (pig, cow):	71, 0
Conread position:	1-226
Cow position:	chr29:10058559-10058340 (view UCSC Genome Browser custom track)
Alignm length:	226
Alignm identity:	175
Alignm E-value:	1.4013e-45
Alignm gaps (pig, cow):	69, 0
Conread position:	1-227
Cow position:	chr29:34297593-34297365 (view UCSC Genome Browser custom track)
Alignm length:	230
Alignm identity:	163
Alignm E-value:	4e-33
Alignm gaps (pig, cow):	11, 140
Conread position:	1-228
Cow position:	chr29:36530843-36531071 (view UCSC Genome Browser custom track)
Alignm length:	229
Alignm identity:	181
Alignm E-value:	0
Alignm gaps (pig, cow):	129, 0
Conread position:	1-229
Cow position:	chr29:19762247-19762469 (view UCSC Genome Browser custom track)
Alignm length:	229
Alignm identity:	176
Alignm E-value:	5.60519e-45
Alignm gaps (pig, cow):	61, 0