• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8058B20.5
        

               
Conread position:
               
1-123
               

               
Cow position:
               
chr8:5979932-5980053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-126
               

               
Cow position:
               
chr8:29624979-29624855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr8:35991040-35991184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
1-149
               

               
Cow position:
               
chr8:6531402-6531552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
1-150
               

               
Cow position:
               
chr8:47248572-47248727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr8:2931716-2931561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1-153
               

               
Cow position:
               
chr8:39174254-39174101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr8:15569494-15569340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr8:26386223-26386073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr8:32198151-32197998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
78, 61
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr8:45126246-45126091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
1-155
               

               
Cow position:
               
chr8:55871710-55871552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
69, 120
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr8:6484942-6484782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr8:53214336-53214174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
157, 121
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr8:4648897-4648729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr8:38681870-38682036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr8:61458258-61458435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr8:45447106-45446925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr8:35580646-35580455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr8:10400288-10400479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
140, 70
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr8:13661007-13661219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
37, 201
               

               
Conread position:
               
1-205
               

               
Cow position:
               
chr8:6073826-6073626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 24
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr8:20320478-20320682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
129, 189
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr8:41219317-41219525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr8:19857987-19857770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr8:34060173-34059964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr8:25349701-25349907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr8:6248886-6248680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr8:42794333-42794105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr8:32130221-32130440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr8:37391370-37391149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 27
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr8:37636005-37635787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr8:40633878-40633658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
124, 83
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr8:53746587-53746363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
83, 127
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr8:59250717-59250933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
29, 128
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr8:948527-948738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr8:5437754-5437971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr8:6951515-6951727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr8:43153701-43153463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr8:52772922-52773144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr8:54052297-54052508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr8:10970823-10971048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr8:12213996-12214212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr8:37672024-37672260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr8:8190075-8189844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr8:19616305-19616520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
217, 56
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr8:38572277-38572056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr8:43940910-43940682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr8:54147655-54147883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
177, 0
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr8:834408-834628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr8:38639226-38639450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr8:4334053-4333821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 90
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr8:16957611-16957828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
217, 125
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr8:21222617-21222849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr8:29030097-29029861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
72, 177
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr8:32854834-32854619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr8:38358402-38358637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
9, 113
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr8:39181781-39181558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
9, 105
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr8:48527977-48527748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 136
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr8:55716744-55716969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
210, 61
               

               
Conread position:
               
1-228
               

               
Cow position:
               
chr8:32133258-32133481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr8:15694484-15694260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
80, 114
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr8:31297255-31297484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
89, 191
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr8:18728777-18729005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 25
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr8:31985252-31985477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
78, 115
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr8:35971839-35972069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 86
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr8:55070706-55070933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 188
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr8:2774775-2775016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr8:6333332-6333570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
13, 40
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr8:19284492-19284721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
139, 19
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr8:22680940-22681179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
126, 115
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr8:24371725-24371493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 76
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr8:38861713-38861497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
222, 144
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr8:40280676-40280909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
145, 40
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr8:44449614-44449385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 20
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr8:47169933-47170166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 125
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr8:55247601-55247372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 83
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr8:3887321-3887553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 193
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr8:10337049-10336821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr8:18171027-18170777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr8:28229485-28229253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
135, 195
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr8:36531619-36531374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr8:46082158-46082390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr8:16653404-16653663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr8:35563324-35563587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
139, 125
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr8:2762410-2762658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
141, 102
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr8:58393551-58393795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 0
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr8:20107802-20107553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr8:58058732-58058989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 193
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr8:5477862-5477602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
66, 71
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr8:3914580-3914850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 116
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr8:2865893-2866176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
141, 34
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr8:42762442-42762171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 0
               

               
Conread position:
               
2-126
               

               
Cow position:
               
chr8:37192354-37192478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-150
               

               
Cow position:
               
chr8:8577819-8577963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
2-211
               

               
Cow position:
               
chr8:43858073-43857857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
96, 179
               

               
Conread position:
               
2-230
               

               
Cow position:
               
chr8:6536116-6535887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
136, 18
               

               
Conread position:
               
2-232
               

               
Cow position:
               
chr8:1303898-1304129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 51
               

               
Conread position:
               
2-232
               

               
Cow position:
               
chr8:17689859-17689629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
2-355
               

               
Cow position:
               
chr8:1620736-1620379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
140, 184
               

               
Conread position:
               
3-218
               

               
Cow position:
               
chr8:22615463-22615247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
98, 103
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr8:48555665-48555452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr8:53383395-53383605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
3-222
               

               
Cow position:
               
chr8:22600104-22599879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
48, 118
               

               
Conread position:
               
3-260
               

               
Cow position:
               
chr8:39380298-39380046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
216, 17
               

               
Conread position:
               
4-98
               

               
Cow position:
               
chr8:28294855-28294761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-126
               

               
Cow position:
               
chr8:16031587-16031465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-137
               

               
Cow position:
               
chr8:20073188-20073055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-155
               

               
Cow position:
               
chr8:38645893-38645739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
27, 117
               

               
Conread position:
               
4-155
               

               
Cow position:
               
chr8:50709046-50709197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr8:15394868-15394662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
136, 59
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr8:57406753-57406964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
4-215
               

               
Cow position:
               
chr8:3015472-3015686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
4-220
               

               
Cow position:
               
chr8:26284863-26284645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 167
               

               
Conread position:
               
4-225
               

               
Cow position:
               
chr8:42112833-42112602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
138, 122
               

               
Conread position:
               
4-227
               

               
Cow position:
               
chr8:34769490-34769716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
110, 198
               

               
Conread position:
               
4-227
               

               
Cow position:
               
chr8:47410074-47410299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
4-229
               

               
Cow position:
               
chr8:53230019-53230230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
214, 53
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr8:2904423-2904185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
138, 17
               

               
Conread position:
               
4-232
               

               
Cow position:
               
chr8:38843635-38843403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
125, 107
               

               
Conread position:
               
4-257
               

               
Cow position:
               
chr8:46235690-46235955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 56
               

               
Conread position:
               
5-126
               

               
Cow position:
               
chr8:9705594-9705715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-154
               

               
Cow position:
               
chr8:33994235-33994384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-224
               

               
Cow position:
               
chr8:49305757-49305535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 38
               

               
Conread position:
               
5-226
               

               
Cow position:
               
chr8:26315499-26315289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
5-227
               

               
Cow position:
               
chr8:48689421-48689648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
5-232
               

               
Cow position:
               
chr8:1666082-1665852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
122, 103
               

               
Conread position:
               
5-252
               

               
Cow position:
               
chr8:9401917-9402167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
31, 171
               

               
Conread position:
               
5-260
               

               
Cow position:
               
chr8:53338670-53338423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
146, 67
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr8:45287298-45287031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
172, 12
               

               
Conread position:
               
6-203
               

               
Cow position:
               
chr8:21212787-21212978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
81, 35
               

               
Conread position:
               
6-204
               

               
Cow position:
               
chr8:36493445-36493648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
6-216
               

               
Cow position:
               
chr8:47284076-47283862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
122, 81
               

               
Conread position:
               
6-221
               

               
Cow position:
               
chr8:4656144-4655932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
137, 64
               

               
Conread position:
               
6-221
               

               
Cow position:
               
chr8:39487643-39487428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
115, 106
               

               
Conread position:
               
6-222
               

               
Cow position:
               
chr8:19727445-19727664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
118, 18
               

               
Conread position:
               
6-225
               

               
Cow position:
               
chr8:5468096-5467869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
122, 15
               

               
Conread position:
               
6-225
               

               
Cow position:
               
chr8:21069980-21069750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
59, 19
               

               
Conread position:
               
6-226
               

               
Cow position:
               
chr8:48775813-48776037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
126, 183
               

               
Conread position:
               
6-227
               

               
Cow position:
               
chr8:27710606-27710831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
115, 102
               

               
Conread position:
               
6-227
               

               
Cow position:
               
chr8:28086150-28086379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
118, 103
               

               
Conread position:
               
6-227
               

               
Cow position:
               
chr8:32047060-32047289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
118, 103
               

               
Conread position:
               
6-229
               

               
Cow position:
               
chr8:12778895-12778681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
90, 29
               

               
Conread position:
               
6-230
               

               
Cow position:
               
chr8:61128704-61128482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
29, 147
               

               
Conread position:
               
6-231
               

               
Cow position:
               
chr8:32620988-32620758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
122, 14
               

               
Conread position:
               
6-232
               

               
Cow position:
               
chr8:30419037-30419268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
121, 104
               

               
Conread position:
               
6-232
               

               
Cow position:
               
chr8:35827810-35827579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
143, 185
               

               
Conread position:
               
7-126
               

               
Cow position:
               
chr8:44558044-44557926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
7-126
               

               
Cow position:
               
chr8:53558610-53558495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
83, 28
               

               
Conread position:
               
7-131
               

               
Cow position:
               
chr8:3593654-3593778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-131
               

               
Cow position:
               
chr8:26304396-26304272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-139
               

               
Cow position:
               
chr8:37855369-37855498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
7-143
               

               
Cow position:
               
chr8:3795821-3795954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
7-143
               

               
Cow position:
               
chr8:5884696-5884560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-143
               

               
Cow position:
               
chr8:43168034-43167897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
7-148
               

               
Cow position:
               
chr8:60485201-60485344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
7-150
               

               
Cow position:
               
chr8:49656433-49656293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
7-152
               

               
Cow position:
               
chr8:36718556-36718699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
107, 114
               

               
Conread position:
               
7-154
               

               
Cow position:
               
chr8:33926147-33926300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 129
               

               
Conread position:
               
7-154
               

               
Cow position:
               
chr8:36671910-36672060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
7-154
               

               
Cow position:
               
chr8:58876064-58876212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 121
               

               
Conread position:
               
7-155
               

               
Cow position:
               
chr8:17167565-17167713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-155
               

               
Cow position:
               
chr8:21077581-21077725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
7-155
               

               
Cow position:
               
chr8:24471647-24471800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
57, 115
               

               
Conread position:
               
7-155
               

               
Cow position:
               
chr8:31762535-31762679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
7-155
               

               
Cow position:
               
chr8:47500800-47500947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
7-155
               

               
Cow position:
               
chr8:50335526-50335382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
7-161
               

               
Cow position:
               
chr8:24428812-24428654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
38, 79
               

               
Conread position:
               
7-172
               

               
Cow position:
               
chr8:33805520-33805679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
7-174
               

               
Cow position:
               
chr8:19011800-19011637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
7-182
               

               
Cow position:
               
chr8:44847607-44847783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
7-183
               

               
Cow position:
               
chr8:55853331-55853502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 33
               

               
Conread position:
               
7-183
               

               
Cow position:
               
chr8:58417684-58417859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
132, 41
               

               
Conread position:
               
7-194
               

               
Cow position:
               
chr8:21324523-21324333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
7-196
               

               
Cow position:
               
chr8:29765255-29765453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
7-198
               

               
Cow position:
               
chr8:57281124-57281316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
135, 61
               

               
Conread position:
               
7-202
               

               
Cow position:
               
chr8:1297505-1297702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
133, 183
               

               
Conread position:
               
7-203
               

               
Cow position:
               
chr8:17247221-17247410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
7-204
               

               
Cow position:
               
chr8:20409683-20409882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
133, 94
               

               
Conread position:
               
7-207
               

               
Cow position:
               
chr8:32326922-32327109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
7-207
               

               
Cow position:
               
chr8:58598635-58598833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
90, 51
               

               
Conread position:
               
7-209
               

               
Cow position:
               
chr8:18081531-18081726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
7-212
               

               
Cow position:
               
chr8:8097272-8097064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
126, 197
               

               
Conread position:
               
7-212
               

               
Cow position:
               
chr8:15426739-15426951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
136, 121
               

               
Conread position:
               
7-213
               

               
Cow position:
               
chr8:20657367-20657178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
7-215
               

               
Cow position:
               
chr8:30324318-30324521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
7-217
               

               
Cow position:
               
chr8:33807722-33807521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
165, 125
               

               
Conread position:
               
7-219
               

               
Cow position:
               
chr8:12798914-12799131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
134, 183
               

               
Conread position:
               
7-219
               

               
Cow position:
               
chr8:52657157-52657367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
7-220
               

               
Cow position:
               
chr8:1023959-1024169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
133, 43
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr8:4500487-4500698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 121
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr8:9168822-9168603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
133, 96
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr8:11124567-11124356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
133, 41
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr8:17046766-17046549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
53, 27
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr8:19642463-19642677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr8:19794398-19794617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 100
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr8:24513148-24512934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
135, 13
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr8:28228240-28228449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr8:34402290-34402506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
133, 195
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr8:35504234-35504011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
129, 41
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr8:37292095-37291876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
116, 111
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr8:37571709-37571493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr8:39329862-39329648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
94, 32
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr8:48174014-48173793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 115
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr8:48513018-48512816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr8:55454662-55454872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr8:56553775-56553985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
133, 70
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr8:60746634-60746854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr8:61067285-61067494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
131, 14
               

               
Conread position:
               
7-222
               

               
Cow position:
               
chr8:16413815-16413602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
131, 52
               

               
Conread position:
               
7-222
               

               
Cow position:
               
chr8:26305871-26305652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
131, 76
               

               
Conread position:
               
7-222
               

               
Cow position:
               
chr8:39592583-39592802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
7-224
               

               
Cow position:
               
chr8:573162-572949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
38, 133
               

               
Conread position:
               
7-224
               

               
Cow position:
               
chr8:3446104-3445884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
27, 138
               

               
Conread position:
               
7-224
               

               
Cow position:
               
chr8:53633228-53633026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
7-225
               

               
Cow position:
               
chr8:27955158-27954938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 110
               

               
Conread position:
               
7-225
               

               
Cow position:
               
chr8:29964852-29965060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
7-226
               

               
Cow position:
               
chr8:935700-935921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
7-226
               

               
Cow position:
               
chr8:24328858-24328632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
103, 27
               

               
Conread position:
               
7-226
               

               
Cow position:
               
chr8:53251708-53251481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
7-226
               

               
Cow position:
               
chr8:55897819-55897603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
93, 138
               

               
Conread position:
               
7-227
               

               
Cow position:
               
chr8:2968585-2968797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
136, 34
               

               
Conread position:
               
7-227
               

               
Cow position:
               
chr8:3579151-3578924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
7-227
               

               
Cow position:
               
chr8:4525076-4525292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
7-227
               

               
Cow position:
               
chr8:5937412-5937641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
35, 115
               

               
Conread position:
               
7-227
               

               
Cow position:
               
chr8:18869872-18870101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
7-227
               

               
Cow position:
               
chr8:20582693-20582469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
7-227
               

               
Cow position:
               
chr8:29958401-29958614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
150, 45
               

               
Conread position:
               
7-227
               

               
Cow position:
               
chr8:37709145-37709350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
7-227
               

               
Cow position:
               
chr8:44674674-44674903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
7-227
               

               
Cow position:
               
chr8:60455183-60455396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
211, 44
               

               
Conread position:
               
7-227
               

               
Cow position:
               
chr8:60488629-60488424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
7-228
               

               
Cow position:
               
chr8:19204451-19204224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
7-228
               

               
Cow position:
               
chr8:19698639-19698857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
150, 41
               

               
Conread position:
               
7-228
               

               
Cow position:
               
chr8:22273858-22274080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
135, 62
               

               
Conread position:
               
7-228
               

               
Cow position:
               
chr8:26008876-26009101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
102, 94
               

               
Conread position:
               
7-228
               

               
Cow position:
               
chr8:42145775-42145547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
7-229
               

               
Cow position:
               
chr8:15187245-15187469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
7-229
               

               
Cow position:
               
chr8:37347460-37347232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
132, 190
               

               
Conread position:
               
7-230
               

               
Cow position:
               
chr8:45879032-45879246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
7-230
               

               
Cow position:
               
chr8:45925614-45925828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
7-230
               

               
Cow position:
               
chr8:48086610-48086405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
7-230
               

               
Cow position:
               
chr8:61537849-61537630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
26, 84
               

               
Conread position:
               
7-231
               

               
Cow position:
               
chr8:3423515-3423281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
7-231
               

               
Cow position:
               
chr8:36375521-36375303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
7-231
               

               
Cow position:
               
chr8:44568796-44569011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
108, 139
               

               
Conread position:
               
7-232
               

               
Cow position:
               
chr8:1187916-1188134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
7-232
               

               
Cow position:
               
chr8:8986950-8986708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
7-232
               

               
Cow position:
               
chr8:11612544-11612770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
53, 17
               

               
Conread position:
               
7-232
               

               
Cow position:
               
chr8:12795819-12796046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
185, 163
               

               
Conread position:
               
7-232
               

               
Cow position:
               
chr8:15391160-15390946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
204, 41
               

               
Conread position:
               
7-232
               

               
Cow position:
               
chr8:15922272-15922040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
122, 67
               

               
Conread position:
               
7-232
               

               
Cow position:
               
chr8:16938473-16938260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
7-232
               

               
Cow position:
               
chr8:17180039-17179821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
7-232
               

               
Cow position:
               
chr8:17199437-17199207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
143, 109
               

               
Conread position:
               
7-232
               

               
Cow position:
               
chr8:20105878-20105650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
133, 28
               

               
Conread position:
               
7-232
               

               
Cow position:
               
chr8:20783267-20783039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
39, 17
               

               
Conread position:
               
7-232
               

               
Cow position:
               
chr8:23447297-23447532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
7-232
               

               
Cow position:
               
chr8:24870813-24870584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
133, 109
               

               
Conread position:
               
7-232
               

               
Cow position:
               
chr8:25554834-25554604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
7-232
               

               
Cow position:
               
chr8:27731032-27731261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
7-232
               

               
Cow position:
               
chr8:37860181-37860413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
7-232
               

               
Cow position:
               
chr8:43942721-43942950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
44, 221
               

               
Conread position:
               
7-232
               

               
Cow position:
               
chr8:55194168-55194395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
149, 214
               

               
Conread position:
               
7-233
               

               
Cow position:
               
chr8:21600441-21600676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
7-233
               

               
Cow position:
               
chr8:24406646-24406418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
135, 100
               

               
Conread position:
               
7-233
               

               
Cow position:
               
chr8:43112851-43112628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
218, 126
               

               
Conread position:
               
7-233
               

               
Cow position:
               
chr8:59345820-59346042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
131, 89
               

               
Conread position:
               
7-234
               

               
Cow position:
               
chr8:31265911-31265689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
60, 41
               

               
Conread position:
               
7-234
               

               
Cow position:
               
chr8:35497685-35497461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
212, 46
               

               
Conread position:
               
7-235
               

               
Cow position:
               
chr8:6910167-6909932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
108, 103
               

               
Conread position:
               
7-235
               

               
Cow position:
               
chr8:9942530-9942297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
127, 94
               

               
Conread position:
               
7-235
               

               
Cow position:
               
chr8:43104299-43104058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
16, 58
               

               
Conread position:
               
7-236
               

               
Cow position:
               
chr8:1526742-1526512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
212, 33
               

               
Conread position:
               
7-236
               

               
Cow position:
               
chr8:8915960-8915732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 80
               

               
Conread position:
               
7-236
               

               
Cow position:
               
chr8:20327855-20327625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
136, 88
               

               
Conread position:
               
7-236
               

               
Cow position:
               
chr8:25388135-25388381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
130, 37
               

               
Conread position:
               
7-236
               

               
Cow position:
               
chr8:29026642-29026434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
7-236
               

               
Cow position:
               
chr8:38860556-38860795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
7-236
               

               
Cow position:
               
chr8:41722192-41721966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
75, 55
               

               
Conread position:
               
7-236
               

               
Cow position:
               
chr8:47136016-47135798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
7-236
               

               
Cow position:
               
chr8:49282040-49281801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
35, 86
               

               
Conread position:
               
7-236
               

               
Cow position:
               
chr8:51524002-51524232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
123, 75
               

               
Conread position:
               
7-236
               

               
Cow position:
               
chr8:55089854-55089633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
7-236
               

               
Cow position:
               
chr8:55901027-55900802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
132, 44
               

               
Conread position:
               
7-236
               

               
Cow position:
               
chr8:57218800-57219019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
211, 41
               

               
Conread position:
               
7-236
               

               
Cow position:
               
chr8:61845557-61845322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
32, 158
               

               
Conread position:
               
7-237
               

               
Cow position:
               
chr8:8323875-8323640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
148, 228
               

               
Conread position:
               
7-237
               

               
Cow position:
               
chr8:19860665-19860449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
180, 34
               

               
Conread position:
               
7-237
               

               
Cow position:
               
chr8:21911631-21911869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
7-237
               

               
Cow position:
               
chr8:32332491-32332245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
7-237
               

               
Cow position:
               
chr8:41888377-41888597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
7-237
               

               
Cow position:
               
chr8:45859803-45860039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
7-237
               

               
Cow position:
               
chr8:55095876-55096100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
135, 60
               

               
Conread position:
               
7-237
               

               
Cow position:
               
chr8:58520288-58520512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
46, 125
               

               
Conread position:
               
7-238
               

               
Cow position:
               
chr8:28321969-28322202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
122, 30
               

               
Conread position:
               
7-240
               

               
Cow position:
               
chr8:40696873-40697110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
136, 41
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr8:8668192-8667952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr8:38643520-38643275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
35, 115
               

               
Conread position:
               
7-242
               

               
Cow position:
               
chr8:35817124-35816883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
115, 109
               

               
Conread position:
               
7-243
               

               
Cow position:
               
chr8:32192685-32192910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
182, 138
               

               
Conread position:
               
7-244
               

               
Cow position:
               
chr8:53606524-53606287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
92, 44
               

               
Conread position:
               
7-245
               

               
Cow position:
               
chr8:18017513-18017756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
122, 109
               

               
Conread position:
               
7-246
               

               
Cow position:
               
chr8:28378772-28378532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
125, 155
               

               
Conread position:
               
7-250
               

               
Cow position:
               
chr8:23585956-23585723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
189, 45
               

               
Conread position:
               
7-251
               

               
Cow position:
               
chr8:11606321-11606574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
133, 189
               

               
Conread position:
               
7-252
               

               
Cow position:
               
chr8:9655571-9655818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
123, 55
               

               
Conread position:
               
7-252
               

               
Cow position:
               
chr8:48482823-48482559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
7-252
               

               
Cow position:
               
chr8:53965482-53965225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
140, 240
               

               
Conread position:
               
7-266
               

               
Cow position:
               
chr8:53360244-53359995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
251, 126
               

               
Conread position:
               
8-126
               

               
Cow position:
               
chr8:1843137-1843019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
81, 72
               

               
Conread position:
               
8-143
               

               
Cow position:
               
chr8:10846235-10846370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
8-155
               

               
Cow position:
               
chr8:28987695-28987842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
8-155
               

               
Cow position:
               
chr8:53948431-53948282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
8-215
               

               
Cow position:
               
chr8:10456463-10456666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
8-215
               

               
Cow position:
               
chr8:26651285-26651492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
17, 68
               

               
Conread position:
               
8-220
               

               
Cow position:
               
chr8:6724341-6724156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
8-220
               

               
Cow position:
               
chr8:19475087-19474871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
8-220
               

               
Cow position:
               
chr8:24867746-24867537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
114, 166
               

               
Conread position:
               
8-221
               

               
Cow position:
               
chr8:52870178-52870391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
130, 56
               

               
Conread position:
               
8-225
               

               
Cow position:
               
chr8:6224438-6224228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
8-226
               

               
Cow position:
               
chr8:12058721-12058941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
135, 63
               

               
Conread position:
               
8-227
               

               
Cow position:
               
chr8:55214035-55214259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
134, 90
               

               
Conread position:
               
8-228
               

               
Cow position:
               
chr8:5499082-5499311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
112, 76
               

               
Conread position:
               
8-228
               

               
Cow position:
               
chr8:34556161-34556386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
81, 29
               

               
Conread position:
               
8-231
               

               
Cow position:
               
chr8:60339923-60339708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
8-232
               

               
Cow position:
               
chr8:19717104-19716897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
8-232
               

               
Cow position:
               
chr8:37559128-37559345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
8-232
               

               
Cow position:
               
chr8:46479884-46479661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
131, 32
               

               
Conread position:
               
8-232
               

               
Cow position:
               
chr8:55961670-55961446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
93, 24
               

               
Conread position:
               
8-235
               

               
Cow position:
               
chr8:9509898-9509672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
8-235
               

               
Cow position:
               
chr8:23608899-23608661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
34, 114
               

               
Conread position:
               
8-236
               

               
Cow position:
               
chr8:522432-522199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
8-236
               

               
Cow position:
               
chr8:19632333-19632557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
92, 96
               

               
Conread position:
               
8-236
               

               
Cow position:
               
chr8:47412916-47413151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
121, 108
               

               
Conread position:
               
8-237
               

               
Cow position:
               
chr8:23018514-23018290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
130, 20
               

               
Conread position:
               
8-240
               

               
Cow position:
               
chr8:6661412-6661175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
8-240
               

               
Cow position:
               
chr8:54303020-54303241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
79, 112
               

               
Conread position:
               
8-241
               

               
Cow position:
               
chr8:46874551-46874780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
21, 16
               

               
Conread position:
               
8-253
               

               
Cow position:
               
chr8:52925725-52925489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
217, 126
               

               
Conread position:
               
8-258
               

               
Cow position:
               
chr8:61157234-61156987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 215
               

               
Conread position:
               
8-263
               

               
Cow position:
               
chr8:2181512-2181247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 258
               

               
Conread position:
               
9-148
               

               
Cow position:
               
chr8:60463508-60463643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
9-150
               

               
Cow position:
               
chr8:36489866-36490007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
9-198
               

               
Cow position:
               
chr8:5934043-5933848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 36
               

               
Conread position:
               
9-201
               

               
Cow position:
               
chr8:22084685-22084488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
9-202
               

               
Cow position:
               
chr8:24125964-24126161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
9-202
               

               
Cow position:
               
chr8:37636574-37636379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
133, 100
               

               
Conread position:
               
9-206
               

               
Cow position:
               
chr8:676319-676117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
9-207
               

               
Cow position:
               
chr8:36768472-36768674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
9-207
               

               
Cow position:
               
chr8:59766596-59766790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
9-208
               

               
Cow position:
               
chr8:1999626-1999829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
9-212
               

               
Cow position:
               
chr8:61567379-61567171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
132, 32
               

               
Conread position:
               
9-218
               

               
Cow position:
               
chr8:22154102-22153889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
9-218
               

               
Cow position:
               
chr8:29522736-29522956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
118, 52
               

               
Conread position:
               
9-220
               

               
Cow position:
               
chr8:33406850-33406646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
87, 131
               

               
Conread position:
               
9-221
               

               
Cow position:
               
chr8:22593070-22592855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
139, 66
               

               
Conread position:
               
9-221
               

               
Cow position:
               
chr8:47342735-47342949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
9-221
               

               
Cow position:
               
chr8:61443217-61443009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
166, 11
               

               
Conread position:
               
9-222
               

               
Cow position:
               
chr8:25271826-25272043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
111, 101
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr8:5201444-5201225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
123, 81
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr8:5893942-5894144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
210, 32
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr8:6681935-6681712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
111, 99
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr8:7204757-7204535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
111, 100
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr8:10262115-10261894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
133, 99
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr8:10305285-10305502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
210, 133
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr8:18290125-18289900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
120, 99
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr8:18831734-18831963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
27, 113
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr8:21224088-21223864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
111, 99
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr8:23580899-23580674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
58, 175
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr8:29149868-29149644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
125, 160
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr8:31776188-31776413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr8:36606275-36606507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
118, 90
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr8:37020474-37020698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr8:38416132-38415908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr8:38612760-38612536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr8:38859323-38859107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
210, 131
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr8:47890253-47890472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
210, 147
               

               
Conread position:
               
9-227
               

               
Cow position:
               
chr8:52122809-52122587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
111, 99
               

               
Conread position:
               
9-228
               

               
Cow position:
               
chr8:39807596-39807817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
9-228
               

               
Cow position:
               
chr8:47751917-47751692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
9-228
               

               
Cow position:
               
chr8:51581151-51580925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
9-230
               

               
Cow position:
               
chr8:53492331-53492546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
9-230
               

               
Cow position:
               
chr8:59553790-59553563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
118, 102
               

               
Conread position:
               
9-231
               

               
Cow position:
               
chr8:20212504-20212276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
9-231
               

               
Cow position:
               
chr8:55502582-55502796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
173, 124
               

               
Conread position:
               
9-232
               

               
Cow position:
               
chr8:2524803-2525026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
123, 181
               

               
Conread position:
               
9-232
               

               
Cow position:
               
chr8:9641356-9641579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
9-232
               

               
Cow position:
               
chr8:24905463-24905699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
132, 8
               

               
Conread position:
               
9-232
               

               
Cow position:
               
chr8:33640362-33640585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 189
               

               
Conread position:
               
9-232
               

               
Cow position:
               
chr8:33755448-33755681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
9-232
               

               
Cow position:
               
chr8:34799683-34799911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
9-232
               

               
Cow position:
               
chr8:45664744-45664959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
214, 132
               

               
Conread position:
               
9-232
               

               
Cow position:
               
chr8:46799287-46799057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
9-232
               

               
Cow position:
               
chr8:46964732-46964961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
112, 107
               

               
Conread position:
               
9-232
               

               
Cow position:
               
chr8:54061895-54062118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 139
               

               
Conread position:
               
9-232
               

               
Cow position:
               
chr8:59131408-59131177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
9-232
               

               
Cow position:
               
chr8:59642498-59642271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
138, 205
               

               
Conread position:
               
9-233
               

               
Cow position:
               
chr8:4648479-4648265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
111, 99
               

               
Conread position:
               
9-233
               

               
Cow position:
               
chr8:39590231-39590462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
9-236
               

               
Cow position:
               
chr8:21220150-21220382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
9-236
               

               
Cow position:
               
chr8:36299896-36299665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
9-236
               

               
Cow position:
               
chr8:39066218-39066456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
9-237
               

               
Cow position:
               
chr8:35456845-35456609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
9-241
               

               
Cow position:
               
chr8:53762128-53762367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
105, 96
               

               
Conread position:
               
9-252
               

               
Cow position:
               
chr8:18091320-18091565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
123, 170
               

               
Conread position:
               
9-252
               

               
Cow position:
               
chr8:48675040-48675293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
133, 99
               

               
Conread position:
               
9-255
               

               
Cow position:
               
chr8:47328339-47328595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
111, 93
               

               
Conread position:
               
9-258
               

               
Cow position:
               
chr8:1252956-1253208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
124, 202
               

               
Conread position:
               
9-382
               

               
Cow position:
               
chr8:4593379-4593001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
111, 99
               

               
Conread position:
               
10-139
               

               
Cow position:
               
chr8:4924566-4924694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
10-152
               

               
Cow position:
               
chr8:3922718-3922576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-153
               

               
Cow position:
               
chr8:56181515-56181374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
107, 38
               

               
Conread position:
               
10-155
               

               
Cow position:
               
chr8:9468344-9468483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
10-155
               

               
Cow position:
               
chr8:45127705-45127561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
10-155
               

               
Cow position:
               
chr8:48955940-48956083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
49, 94
               

               
Conread position:
               
10-162
               

               
Cow position:
               
chr8:20339277-20339424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
10-198
               

               
Cow position:
               
chr8:36249420-36249231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
10-207
               

               
Cow position:
               
chr8:50310855-50310656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 162
               

               
Conread position:
               
10-218
               

               
Cow position:
               
chr8:16144128-16144340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
10-221
               

               
Cow position:
               
chr8:25455404-25455597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
10-221
               

               
Cow position:
               
chr8:27138797-27138588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
129, 180
               

               
Conread position:
               
10-221
               

               
Cow position:
               
chr8:28209980-28210196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
10-221
               

               
Cow position:
               
chr8:32457786-32457998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
65, 90
               

               
Conread position:
               
10-221
               

               
Cow position:
               
chr8:41905621-41905410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
130, 50
               

               
Conread position:
               
10-221
               

               
Cow position:
               
chr8:41914529-41914318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
130, 50
               

               
Conread position:
               
10-224
               

               
Cow position:
               
chr8:46743314-46743102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
129, 38
               

               
Conread position:
               
10-225
               

               
Cow position:
               
chr8:20911079-20910862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
134, 177
               

               
Conread position:
               
10-226
               

               
Cow position:
               
chr8:1177883-1177672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
10-226
               

               
Cow position:
               
chr8:37275757-37275972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
179, 34
               

               
Conread position:
               
10-226
               

               
Cow position:
               
chr8:53552673-53552884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
112, 107
               

               
Conread position:
               
10-227
               

               
Cow position:
               
chr8:11863948-11864167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
119, 106
               

               
Conread position:
               
10-227
               

               
Cow position:
               
chr8:37298470-37298695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
37, 113
               

               
Conread position:
               
10-230
               

               
Cow position:
               
chr8:18730445-18730678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
10-230
               

               
Cow position:
               
chr8:38894010-38894239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
120, 192
               

               
Conread position:
               
10-231
               

               
Cow position:
               
chr8:37334170-37334394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
153, 79
               

               
Conread position:
               
10-232
               

               
Cow position:
               
chr8:10942747-10942523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
132, 38
               

               
Conread position:
               
10-232
               

               
Cow position:
               
chr8:39896245-39896455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
10-234
               

               
Cow position:
               
chr8:20033921-20033693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
117, 162
               

               
Conread position:
               
10-235
               

               
Cow position:
               
chr8:38852087-38852317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
104, 19
               

               
Conread position:
               
10-236
               

               
Cow position:
               
chr8:51511853-51511632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
132, 43
               

               
Conread position:
               
10-237
               

               
Cow position:
               
chr8:39352877-39352648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
140, 67
               

               
Conread position:
               
10-242
               

               
Cow position:
               
chr8:54177717-54177481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
122, 172
               

               
Conread position:
               
10-250
               

               
Cow position:
               
chr8:33125496-33125734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
128, 38
               

               
Conread position:
               
10-265
               

               
Cow position:
               
chr8:37167741-37167996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
132, 150
               

               
Conread position:
               
11-212
               

               
Cow position:
               
chr8:35583559-35583374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
11-221
               

               
Cow position:
               
chr8:6193979-6194192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
147, 22
               

               
Conread position:
               
11-221
               

               
Cow position:
               
chr8:10081904-10082095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
11-221
               

               
Cow position:
               
chr8:19784861-19785068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 37
               

               
Conread position:
               
11-221
               

               
Cow position:
               
chr8:43101467-43101253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
116, 100
               

               
Conread position:
               
11-226
               

               
Cow position:
               
chr8:13454625-13454404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
131, 181
               

               
Conread position:
               
11-227
               

               
Cow position:
               
chr8:34820319-34820097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
11-231
               

               
Cow position:
               
chr8:1832701-1832477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
113, 97
               

               
Conread position:
               
11-232
               

               
Cow position:
               
chr8:20851275-20851046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
66, 48
               

               
Conread position:
               
11-232
               

               
Cow position:
               
chr8:52197458-52197233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
137, 90
               

               
Conread position:
               
11-235
               

               
Cow position:
               
chr8:46842273-46842049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
93, 24
               

               
Conread position:
               
11-236
               

               
Cow position:
               
chr8:16061073-16061297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
135, 30
               

               
Conread position:
               
11-236
               

               
Cow position:
               
chr8:43163704-43163497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
106, 139
               

               
Conread position:
               
11-241
               

               
Cow position:
               
chr8:26625867-26626101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
11-246
               

               
Cow position:
               
chr8:6232897-6232663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
53, 135
               

               
Conread position:
               
11-246
               

               
Cow position:
               
chr8:55974815-55974581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
129, 24
               

               
Conread position:
               
12-146
               

               
Cow position:
               
chr8:18647358-18647230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
12-148
               

               
Cow position:
               
chr8:13374546-13374681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
12-150
               

               
Cow position:
               
chr8:28313721-28313582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
116, 9
               

               
Conread position:
               
12-154
               

               
Cow position:
               
chr8:25751870-25751733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
12-224
               

               
Cow position:
               
chr8:23370311-23370107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
48, 119
               

               
Conread position:
               
12-226
               

               
Cow position:
               
chr8:37443532-37443738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
173, 23
               

               
Conread position:
               
12-227
               

               
Cow position:
               
chr8:4203854-4203633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
115, 99
               

               
Conread position:
               
12-227
               

               
Cow position:
               
chr8:21858719-21858494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
12-227
               

               
Cow position:
               
chr8:26031450-26031665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
108, 90
               

               
Conread position:
               
12-227
               

               
Cow position:
               
chr8:26632768-26632547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
12-227
               

               
Cow position:
               
chr8:51402959-51403175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
130, 17
               

               
Conread position:
               
12-228
               

               
Cow position:
               
chr8:38811303-38811520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
130, 23
               

               
Conread position:
               
12-228
               

               
Cow position:
               
chr8:49721115-49721338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
12-230
               

               
Cow position:
               
chr8:35185735-35185941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
156, 67
               

               
Conread position:
               
12-231
               

               
Cow position:
               
chr8:43439612-43439826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
131, 52
               

               
Conread position:
               
13-221
               

               
Cow position:
               
chr8:669564-669366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
13-222
               

               
Cow position:
               
chr8:53587316-53587112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
163, 51
               

               
Conread position:
               
13-226
               

               
Cow position:
               
chr8:48524953-48524753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
13-232
               

               
Cow position:
               
chr8:54031882-54032098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
204, 39
               

               
Conread position:
               
13-236
               

               
Cow position:
               
chr8:4992554-4992776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
127, 64
               

               
Conread position:
               
14-221
               

               
Cow position:
               
chr8:18945310-18945112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
14-221
               

               
Cow position:
               
chr8:51208784-51209002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
14-227
               

               
Cow position:
               
chr8:48645465-48645684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
14-230
               

               
Cow position:
               
chr8:55884975-55885191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
15-154
               

               
Cow position:
               
chr8:23179538-23179402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
118, 33
               

               
Conread position:
               
15-202
               

               
Cow position:
               
chr8:32278345-32278154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 64
               

               
Conread position:
               
15-217
               

               
Cow position:
               
chr8:19995730-19995525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
15-217
               

               
Cow position:
               
chr8:60594857-60595068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
125, 191
               

               
Conread position:
               
15-221
               

               
Cow position:
               
chr8:38711596-38711797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
15-226
               

               
Cow position:
               
chr8:19980077-19979874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
15-227
               

               
Cow position:
               
chr8:32303931-32304155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
15-232
               

               
Cow position:
               
chr8:5173282-5173061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 89
               

               
Conread position:
               
15-233
               

               
Cow position:
               
chr8:55348340-55348541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
16-154
               

               
Cow position:
               
chr8:61556949-61556812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
16-215
               

               
Cow position:
               
chr8:18057750-18057933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
17-207
               

               
Cow position:
               
chr8:54197874-54197673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
17-221
               

               
Cow position:
               
chr8:11216851-11216648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
9, 129
               

               
Conread position:
               
17-240
               

               
Cow position:
               
chr8:2376016-2375788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
53, 41
               

               
Conread position:
               
19-221
               

               
Cow position:
               
chr8:3762155-3762360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
123, 170
               

               
Conread position:
               
19-224
               

               
Cow position:
               
chr8:29004253-29004060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
20-216
               

               
Cow position:
               
chr8:3423013-3423211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
117, 21
               

               
Conread position:
               
20-222
               

               
Cow position:
               
chr8:19223650-19223450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
102, 16
               

               
Conread position:
               
20-233
               

               
Cow position:
               
chr8:24419269-24419063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
199, 124
               

               
Conread position:
               
20-236
               

               
Cow position:
               
chr8:45687669-45687450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
122, 98
               

               
Conread position:
               
20-236
               

               
Cow position:
               
chr8:47057657-47057438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
21-241
               

               
Cow position:
               
chr8:8714803-8715021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 123
               

               
Conread position:
               
21-242
               

               
Cow position:
               
chr8:4796770-4796975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
22-227
               

               
Cow position:
               
chr8:21940818-21940607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
23-225
               

               
Cow position:
               
chr8:6477858-6478059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
106, 93
               

               
Conread position:
               
23-227
               

               
Cow position:
               
chr8:51492742-51492532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
106, 88
               

               
Conread position:
               
23-232
               

               
Cow position:
               
chr8:46544108-46543898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
120, 30
               

               
Conread position:
               
23-235
               

               
Cow position:
               
chr8:58082093-58081873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
125, 44
               

               
Conread position:
               
24-224
               

               
Cow position:
               
chr8:38789967-38790170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
105, 49
               

               
Conread position:
               
24-227
               

               
Cow position:
               
chr8:45232565-45232784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
116, 24
               

               
Conread position:
               
24-231
               

               
Cow position:
               
chr8:8773066-8772853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
113, 63
               

               
Conread position:
               
24-231
               

               
Cow position:
               
chr8:23111049-23110829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
69, 208
               

               
Conread position:
               
24-238
               

               
Cow position:
               
chr8:58636754-58636958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
24-256
               

               
Cow position:
               
chr8:55725756-55725513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
117, 48
               

               
Conread position:
               
24-264
               

               
Cow position:
               
chr8:24363627-24363380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
27, 47
               

               
Conread position:
               
25-159
               

               
Cow position:
               
chr8:4590994-4590860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
25-162
               

               
Cow position:
               
chr8:5546151-5546289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
25-195
               

               
Cow position:
               
chr8:7609922-7609758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
25-217
               

               
Cow position:
               
chr8:25640088-25639899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
25-222
               

               
Cow position:
               
chr8:5484560-5484359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
25-222
               

               
Cow position:
               
chr8:19378264-19378467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
25-226
               

               
Cow position:
               
chr8:16500951-16500751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
12, 112
               

               
Conread position:
               
25-227
               

               
Cow position:
               
chr8:39350775-39350568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
25-228
               

               
Cow position:
               
chr8:50281890-50282093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
125, 23
               

               
Conread position:
               
25-229
               

               
Cow position:
               
chr8:34035690-34035892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
97, 66
               

               
Conread position:
               
25-232
               

               
Cow position:
               
chr8:39426190-39426402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
75, 79
               

               
Conread position:
               
25-232
               

               
Cow position:
               
chr8:44126482-44126694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
104, 91
               

               
Conread position:
               
25-236
               

               
Cow position:
               
chr8:5665681-5665462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
25-237
               

               
Cow position:
               
chr8:35534272-35534061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
117, 150
               

               
Conread position:
               
25-239
               

               
Cow position:
               
chr8:58183290-58183077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
26-142
               

               
Cow position:
               
chr8:61677187-61677300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
26-221
               

               
Cow position:
               
chr8:29934055-29934255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
26-226
               

               
Cow position:
               
chr8:6675211-6675410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
108, 36
               

               
Conread position:
               
26-230
               

               
Cow position:
               
chr8:39556139-39556350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
35, 27
               

               
Conread position:
               
26-232
               

               
Cow position:
               
chr8:49658844-49659053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
37, 62
               

               
Conread position:
               
26-232
               

               
Cow position:
               
chr8:57397505-57397305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
26-233
               

               
Cow position:
               
chr8:10801866-10801669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
28-124
               

               
Cow position:
               
chr8:20345700-20345798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
28-146
               

               
Cow position:
               
chr8:28884853-28884971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
28-220
               

               
Cow position:
               
chr8:54546607-54546808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
28-221
               

               
Cow position:
               
chr8:48699989-48700181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
104, 73
               

               
Conread position:
               
28-223
               

               
Cow position:
               
chr8:11003784-11003584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
28-227
               

               
Cow position:
               
chr8:26961190-26961395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
99, 83
               

               
Conread position:
               
28-231
               

               
Cow position:
               
chr8:61848711-61848507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
28-232
               

               
Cow position:
               
chr8:6184223-6184015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
101, 88
               

               
Conread position:
               
28-232
               

               
Cow position:
               
chr8:13118383-13118591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
7, 78
               

               
Conread position:
               
28-232
               

               
Cow position:
               
chr8:21917319-21917121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
112, 24
               

               
Conread position:
               
28-232
               

               
Cow position:
               
chr8:38696379-38696173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
115, 143
               

               
Conread position:
               
28-233
               

               
Cow position:
               
chr8:20926615-20926401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
28-233
               

               
Cow position:
               
chr8:21826719-21826517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
189, 51
               

               
Conread position:
               
28-233
               

               
Cow position:
               
chr8:42378881-42378675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
113, 192
               

               
Conread position:
               
28-234
               

               
Cow position:
               
chr8:1651609-1651817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
122, 34
               

               
Conread position:
               
28-237
               

               
Cow position:
               
chr8:51443685-51443470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
68, 90
               

               
Conread position:
               
28-244
               

               
Cow position:
               
chr8:23653085-23652866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
94, 46
               

               
Conread position:
               
28-252
               

               
Cow position:
               
chr8:8975720-8975951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
99, 88
               

               
Conread position:
               
29-221
               

               
Cow position:
               
chr8:13479003-13479198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
47, 169
               

               
Conread position:
               
29-227
               

               
Cow position:
               
chr8:12520378-12520177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
100, 163
               

               
Conread position:
               
29-232
               

               
Cow position:
               
chr8:8112754-8112962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
25, 182
               

               
Conread position:
               
29-236
               

               
Cow position:
               
chr8:3926052-3925843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
112, 203
               

               
Conread position:
               
30-161
               

               
Cow position:
               
chr8:13732588-13732454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
30-228
               

               
Cow position:
               
chr8:55214267-55214468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
112, 18
               

               
Conread position:
               
30-231
               

               
Cow position:
               
chr8:53964439-53964249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
30-236
               

               
Cow position:
               
chr8:38993751-38993957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
30-236
               

               
Cow position:
               
chr8:61739652-61739452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
30-252
               

               
Cow position:
               
chr8:37148327-37148550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
5, 195
               

               
Conread position:
               
31-205
               

               
Cow position:
               
chr8:8283281-8283103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
31-225
               

               
Cow position:
               
chr8:60668492-60668306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 102
               

               
Conread position:
               
31-227
               

               
Cow position:
               
chr8:3056859-3057061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
32-139
               

               
Cow position:
               
chr8:53481833-53481940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
32-155
               

               
Cow position:
               
chr8:55502803-55502926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
32-232
               

               
Cow position:
               
chr8:35452594-35452794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
115, 55
               

               
Conread position:
               
33-236
               

               
Cow position:
               
chr8:49542903-49543103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
109, 137
               

               
Conread position:
               
34-220
               

               
Cow position:
               
chr8:43051993-43052183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
104, 32
               

               
Conread position:
               
34-232
               

               
Cow position:
               
chr8:20897367-20897571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
34-232
               

               
Cow position:
               
chr8:56249784-56249981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
34-233
               

               
Cow position:
               
chr8:21775943-21776134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
191, 111
               

               
Conread position:
               
34-234
               

               
Cow position:
               
chr8:5877665-5877864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
153, 105
               

               
Conread position:
               
34-284
               

               
Cow position:
               
chr8:5672132-5671880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
110, 44
               

               
Conread position:
               
35-161
               

               
Cow position:
               
chr8:56580632-56580758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
35-222
               

               
Cow position:
               
chr8:11927151-11927349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
35-232
               

               
Cow position:
               
chr8:29173232-29173428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
93, 159
               

               
Conread position:
               
35-364
               

               
Cow position:
               
chr8:50682126-50682461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
107, 6
               

               
Conread position:
               
36-220
               

               
Cow position:
               
chr8:16216083-16216268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
93, 80
               

               
Conread position:
               
36-227
               

               
Cow position:
               
chr8:39898720-39898902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
10, 91
               

               
Conread position:
               
36-231
               

               
Cow position:
               
chr8:4205990-4206175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
37-221
               

               
Cow position:
               
chr8:39190582-39190777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
37-227
               

               
Cow position:
               
chr8:26247566-26247377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
76, 70
               

               
Conread position:
               
39-222
               

               
Cow position:
               
chr8:58028383-58028204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
41-220
               

               
Cow position:
               
chr8:6160806-6160982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
41-221
               

               
Cow position:
               
chr8:28509424-28509246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
41-221
               

               
Cow position:
               
chr8:40743191-40743008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
92, 77
               

               
Conread position:
               
41-227
               

               
Cow position:
               
chr8:2289062-2288870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
41-227
               

               
Cow position:
               
chr8:6006082-6005890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
41-228
               

               
Cow position:
               
chr8:690251-690067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
41-232
               

               
Cow position:
               
chr8:9814922-9815115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
91, 147
               

               
Conread position:
               
41-232
               

               
Cow position:
               
chr8:26147604-26147796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
88, 75
               

               
Conread position:
               
41-233
               

               
Cow position:
               
chr8:27661890-27662080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
41-236
               

               
Cow position:
               
chr8:8509722-8509920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
83, 77
               

               
Conread position:
               
41-242
               

               
Cow position:
               
chr8:50024936-50024732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
99, 149
               

               
Conread position:
               
41-244
               

               
Cow position:
               
chr8:2157058-2156847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
41-251
               

               
Cow position:
               
chr8:36860501-36860709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
180, 12
               

               
Conread position:
               
41-252
               

               
Cow position:
               
chr8:10832404-10832188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
101, 7
               

               
Conread position:
               
41-252
               

               
Cow position:
               
chr8:36034939-36034721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
41-311
               

               
Cow position:
               
chr8:47679541-47679805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
178, 28
               

               
Conread position:
               
42-154
               

               
Cow position:
               
chr8:60585187-60585075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
42-208
               

               
Cow position:
               
chr8:3793182-3793350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
42-225
               

               
Cow position:
               
chr8:53624797-53624609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
42-232
               

               
Cow position:
               
chr8:28506913-28506733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
175, 22
               

               
Conread position:
               
42-232
               

               
Cow position:
               
chr8:32932100-32932286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
105, 88
               

               
Conread position:
               
42-232
               

               
Cow position:
               
chr8:39545031-39545218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
112, 18
               

               
Conread position:
               
42-236
               

               
Cow position:
               
chr8:45149761-45149579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
42-237
               

               
Cow position:
               
chr8:10680799-10680593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
26, 158
               

               
Conread position:
               
42-266
               

               
Cow position:
               
chr8:38996685-38996914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
42-282
               

               
Cow position:
               
chr8:8767108-8766859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
42-285
               

               
Cow position:
               
chr8:54306385-54306626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
183, 19
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr8:6417131-6416939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
86, 71
               

               
Conread position:
               
43-232
               

               
Cow position:
               
chr8:26881797-26881606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
43-236
               

               
Cow position:
               
chr8:51160532-51160339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
176, 90
               

               
Conread position:
               
44-219
               

               
Cow position:
               
chr8:50015593-50015414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 72
               

               
Conread position:
               
44-227
               

               
Cow position:
               
chr8:47707482-47707305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
44-229
               

               
Cow position:
               
chr8:24427171-24426992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
6, 142
               

               
Conread position:
               
44-232
               

               
Cow position:
               
chr8:27033803-27033988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
78, 72
               

               
Conread position:
               
45-220
               

               
Cow position:
               
chr8:36397652-36397477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
116, 39
               

               
Conread position:
               
45-230
               

               
Cow position:
               
chr8:37437318-37437131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
53, 13
               

               
Conread position:
               
45-230
               

               
Cow position:
               
chr8:38465129-38465297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
46-189
               

               
Cow position:
               
chr8:55191339-55191478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
47-222
               

               
Cow position:
               
chr8:22554256-22554078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
101, 6
               

               
Conread position:
               
47-227
               

               
Cow position:
               
chr8:53641450-53641638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
25, 72
               

               
Conread position:
               
48-229
               

               
Cow position:
               
chr8:5476472-5476303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
49-217
               

               
Cow position:
               
chr8:3290777-3290612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
49-218
               

               
Cow position:
               
chr8:4753934-4753766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
152, 81
               

               
Conread position:
               
49-225
               

               
Cow position:
               
chr8:38665575-38665753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
91, 151
               

               
Conread position:
               
49-227
               

               
Cow position:
               
chr8:36054199-36054384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
49-232
               

               
Cow position:
               
chr8:30868695-30868508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
49-264
               

               
Cow position:
               
chr8:22129931-22129731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
196, 44
               

               
Conread position:
               
49-265
               

               
Cow position:
               
chr8:53880609-53880385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
78, 47
               

               
Conread position:
               
50-206
               

               
Cow position:
               
chr8:35936803-35936957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
50-237
               

               
Cow position:
               
chr8:57586132-57586326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
50-243
               

               
Cow position:
               
chr8:61554942-61554752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
49, 96
               

               
Conread position:
               
51-232
               

               
Cow position:
               
chr8:31902647-31902468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
52-221
               

               
Cow position:
               
chr8:56575350-56575504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
52-231
               

               
Cow position:
               
chr8:48182542-48182726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
93, 66
               

               
Conread position:
               
53-213
               

               
Cow position:
               
chr8:19227038-19226886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
53-227
               

               
Cow position:
               
chr8:6795421-6795602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
76, 164
               

               
Conread position:
               
53-237
               

               
Cow position:
               
chr8:13922679-13922864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
84, 172
               

               
Conread position:
               
53-252
               

               
Cow position:
               
chr8:55063975-55064174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
88, 141
               

               
Conread position:
               
54-226
               

               
Cow position:
               
chr8:38461659-38461487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
74, 43
               

               
Conread position:
               
54-231
               

               
Cow position:
               
chr8:31767992-31767821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
54-320
               

               
Cow position:
               
chr8:11135201-11134927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
87, 126
               

               
Conread position:
               
55-183
               

               
Cow position:
               
chr8:33020256-33020386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
55-227
               

               
Cow position:
               
chr8:46616430-46616601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
55-229
               

               
Cow position:
               
chr8:36471364-36471534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
89, 133
               

               
Conread position:
               
55-231
               

               
Cow position:
               
chr8:25649638-25649471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
55-232
               

               
Cow position:
               
chr8:3821941-3821760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
74, 61
               

               
Conread position:
               
55-236
               

               
Cow position:
               
chr8:2638837-2638659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
136, 90
               

               
Conread position:
               
56-227
               

               
Cow position:
               
chr8:54391253-54391090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
53, 85
               

               
Conread position:
               
56-230
               

               
Cow position:
               
chr8:38078517-38078681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
56-236
               

               
Cow position:
               
chr8:20080040-20079863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
174, 70
               

               
Conread position:
               
56-243
               

               
Cow position:
               
chr8:51501242-51501055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
57-230
               

               
Cow position:
               
chr8:36385514-36385341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
58-232
               

               
Cow position:
               
chr8:12105594-12105773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 12
               

               
Conread position:
               
58-232
               

               
Cow position:
               
chr8:39968236-39968058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
59-207
               

               
Cow position:
               
chr8:24970913-24971051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
59-222
               

               
Cow position:
               
chr8:32968120-32968278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
14, 87
               

               
Conread position:
               
59-230
               

               
Cow position:
               
chr8:633628-633452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
59-232
               

               
Cow position:
               
chr8:57388844-57389018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
163, 87
               

               
Conread position:
               
59-236
               

               
Cow position:
               
chr8:5385636-5385458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 42
               

               
Conread position:
               
59-240
               

               
Cow position:
               
chr8:56986287-56986470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
92, 135
               

               
Conread position:
               
59-257
               

               
Cow position:
               
chr8:39116187-39116378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
30, 49
               

               
Conread position:
               
60-233
               

               
Cow position:
               
chr8:24488526-24488704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
78, 156
               

               
Conread position:
               
61-218
               

               
Cow position:
               
chr8:45167584-45167423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
61-234
               

               
Cow position:
               
chr8:10293389-10293216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 135
               

               
Conread position:
               
61-236
               

               
Cow position:
               
chr8:16053742-16053914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
62-233
               

               
Cow position:
               
chr8:5730082-5730252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
66-231
               

               
Cow position:
               
chr8:39358057-39357883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
95, 53
               

               
Conread position:
               
67-217
               

               
Cow position:
               
chr8:10639790-10639947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
70, 49
               

               
Conread position:
               
69-216
               

               
Cow position:
               
chr8:20617337-20617491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
72, 47
               

               
Conread position:
               
69-221
               

               
Cow position:
               
chr8:28383030-28382874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
69-228
               

               
Cow position:
               
chr8:33663960-33664117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
58, 47
               

               
Conread position:
               
69-230
               

               
Cow position:
               
chr8:32243651-32243814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
9, 143
               

               
Conread position:
               
70-205
               

               
Cow position:
               
chr8:18887379-18887510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
74-218
               

               
Cow position:
               
chr8:39488245-39488387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
113, 15
               

               
Conread position:
               
74-221
               

               
Cow position:
               
chr8:60200038-60199888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
74-222
               

               
Cow position:
               
chr8:23596701-23596559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
74-236
               

               
Cow position:
               
chr8:48210913-48210747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
77-230
               

               
Cow position:
               
chr8:608056-607901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
66, 139
               

               
Conread position:
               
79-227
               

               
Cow position:
               
chr8:41466360-41466205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
80-232
               

               
Cow position:
               
chr8:25083242-25083398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
81-221
               

               
Cow position:
               
chr8:33864920-33865060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
81-223
               

               
Cow position:
               
chr8:58626532-58626674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
81-226
               

               
Cow position:
               
chr8:61278093-61277947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
139, 52
               

               
Conread position:
               
81-232
               

               
Cow position:
               
chr8:59092816-59092660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 39
               

               
Conread position:
               
82-249
               

               
Cow position:
               
chr8:9646613-9646773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
137, 63
               

               
Conread position:
               
83-237
               

               
Cow position:
               
chr8:36912465-36912303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
84-221
               

               
Cow position:
               
chr8:8850558-8850424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
87-227
               

               
Cow position:
               
chr8:22947935-22947802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
136, 58
               

               
Conread position:
               
87-232
               

               
Cow position:
               
chr8:10194139-10194289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
87-233
               

               
Cow position:
               
chr8:28086013-28085865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
87-238
               

               
Cow position:
               
chr8:20850281-20850131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
131, 103
               

               
Conread position:
               
89-221
               

               
Cow position:
               
chr8:37191161-37191293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
9, 101
               

               
Conread position:
               
89-231
               

               
Cow position:
               
chr8:5515907-5516047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
89-232
               

               
Cow position:
               
chr8:46684507-46684645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
89-260
               

               
Cow position:
               
chr8:7465211-7465044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
90-222
               

               
Cow position:
               
chr8:11555372-11555244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
91-220
               

               
Cow position:
               
chr8:11203116-11203242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
91-230
               

               
Cow position:
               
chr8:20112510-20112655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 103
               

               
Conread position:
               
93-247
               

               
Cow position:
               
chr8:13016026-13016176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
94-219
               

               
Cow position:
               
chr8:31987499-31987615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
95-260
               

               
Cow position:
               
chr8:53087885-53087717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
9, 116
               

               
Conread position:
               
95-278
               

               
Cow position:
               
chr8:1936963-1937138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
162, 8
               

               
Conread position:
               
96-221
               

               
Cow position:
               
chr8:27914599-27914479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
42, 53
               

               
Conread position:
               
96-231
               

               
Cow position:
               
chr8:3686257-3686127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 96
               

               
Conread position:
               
96-242
               

               
Cow position:
               
chr8:31290637-31290788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
97-227
               

               
Cow position:
               
chr8:31249613-31249744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
25, 37
               

               
Conread position:
               
103-252
               

               
Cow position:
               
chr8:45352160-45352008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
39, 109
               

               
Conread position:
               
104-224
               

               
Cow position:
               
chr8:33399998-33399880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
114, 51
               

               
Conread position:
               
105-241
               

               
Cow position:
               
chr8:50770258-50770390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
107-225
               

               
Cow position:
               
chr8:57041536-57041418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
107-236
               

               
Cow position:
               
chr8:36502763-36502634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
109-221
               

               
Cow position:
               
chr8:15182464-15182577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
117-241
               

               
Cow position:
               
chr8:53642291-53642162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
128-228
               

               
Cow position:
               
chr8:49560527-49560428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
130-227
               

               
Cow position:
               
chr8:27950816-27950913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
132-233
               

               
Cow position:
               
chr8:19383715-19383611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
134-249
               

               
Cow position:
               
chr8:17905724-17905611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
137-221
               

               
Cow position:
               
chr8:11284510-11284595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
86
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
139-222
               

               
Cow position:
               
chr8:55502959-55503042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
84
               

               
Alignm identity:
               
75
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
139-226
               

               
Cow position:
               
chr8:31236686-31236599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
88
               

               
Alignm identity:
               
76
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
139-236
               

               
Cow position:
               
chr8:47248987-47249083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
139-237
               

               
Cow position:
               
chr8:43110-43205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
139-238
               

               
Cow position:
               
chr8:19997865-19997766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
143-232
               

               
Cow position:
               
chr8:3145014-3145102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
90
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
143-237
               

               
Cow position:
               
chr8:46190899-46190805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
80
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.