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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8058J07.5
        

               
Conread position:
               
231-780
               

               
Cow position:
               
chr3:5374584-5374049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 91
               

               
Conread position:
               
300-547
               

               
Cow position:
               
chr3:30357714-30357464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
11, 117
               

               
Conread position:
               
309-632
               

               
Cow position:
               
chr3:61116676-61116995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
25, 32
               

               
Conread position:
               
309-743
               

               
Cow position:
               
chr3:78077385-78076941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
60, 189
               

               
Conread position:
               
311-696
               

               
Cow position:
               
chr3:24353034-24352665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 54
               

               
Conread position:
               
313-737
               

               
Cow position:
               
chr3:73764024-73764438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 75
               

               
Conread position:
               
314-478
               

               
Cow position:
               
chr3:8526189-8526349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
314-543
               

               
Cow position:
               
chr3:8349382-8349620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 10
               

               
Conread position:
               
314-611
               

               
Cow position:
               
chr3:3649050-3649334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
176, 20
               

               
Conread position:
               
314-710
               

               
Cow position:
               
chr3:11063551-11063163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
316-479
               

               
Cow position:
               
chr3:64909903-64910081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
14, 144
               

               
Conread position:
               
316-678
               

               
Cow position:
               
chr3:59597360-59597002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 20
               

               
Conread position:
               
316-747
               

               
Cow position:
               
chr3:52608362-52607931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
11, 30
               

               
Conread position:
               
317-479
               

               
Cow position:
               
chr3:28323397-28323232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
46, 77
               

               
Conread position:
               
317-591
               

               
Cow position:
               
chr3:3818951-3818697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
85, 51
               

               
Conread position:
               
317-633
               

               
Cow position:
               
chr3:67519988-67520310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
13, 90
               

               
Conread position:
               
317-636
               

               
Cow position:
               
chr3:17331909-17331585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
12, 138
               

               
Conread position:
               
317-641
               

               
Cow position:
               
chr3:58317760-58318100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
16, 139
               

               
Conread position:
               
317-675
               

               
Cow position:
               
chr3:55819936-55819566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
53, 135
               

               
Conread position:
               
317-708
               

               
Cow position:
               
chr3:45211492-45211082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
17, 125
               

               
Conread position:
               
317-734
               

               
Cow position:
               
chr3:22232481-22232882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
173, 98
               

               
Conread position:
               
317-747
               

               
Cow position:
               
chr3:51146508-51146918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
11, 49
               

               
Conread position:
               
317-747
               

               
Cow position:
               
chr3:77365106-77365546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 7
               

               
Conread position:
               
317-795
               

               
Cow position:
               
chr3:70896228-70895745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
319-538
               

               
Cow position:
               
chr3:81234573-81234339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
44, 135
               

               
Conread position:
               
319-553
               

               
Cow position:
               
chr3:63449168-63448951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
83, 42
               

               
Conread position:
               
319-635
               

               
Cow position:
               
chr3:3036756-3037069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
82, 46
               

               
Conread position:
               
319-636
               

               
Cow position:
               
chr3:32610430-32610109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
10, 47
               

               
Conread position:
               
319-744
               

               
Cow position:
               
chr3:59474305-59473863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 134
               

               
Conread position:
               
319-747
               

               
Cow position:
               
chr3:13353549-13353105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
50, 73
               

               
Conread position:
               
319-754
               

               
Cow position:
               
chr3:65969360-65968895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 144
               

               
Conread position:
               
319-762
               

               
Cow position:
               
chr3:3985501-3985063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 88
               

               
Conread position:
               
320-459
               

               
Cow position:
               
chr3:53249669-53249523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
40, 132
               

               
Conread position:
               
320-499
               

               
Cow position:
               
chr3:4518000-4518190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 134
               

               
Conread position:
               
320-507
               

               
Cow position:
               
chr3:50350794-50350988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 76
               

               
Conread position:
               
320-542
               

               
Cow position:
               
chr3:5040120-5040361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
43, 12
               

               
Conread position:
               
320-560
               

               
Cow position:
               
chr3:11229187-11229438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
40, 129
               

               
Conread position:
               
320-571
               

               
Cow position:
               
chr3:76270074-76269819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
11, 134
               

               
Conread position:
               
320-585
               

               
Cow position:
               
chr3:48459145-48459424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 135
               

               
Conread position:
               
320-626
               

               
Cow position:
               
chr3:55177567-55177882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
43, 130
               

               
Conread position:
               
320-628
               

               
Cow position:
               
chr3:13380095-13380420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
320-630
               

               
Cow position:
               
chr3:58527561-58527261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
43, 130
               

               
Conread position:
               
320-633
               

               
Cow position:
               
chr3:76024687-76024381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 132
               

               
Conread position:
               
320-635
               

               
Cow position:
               
chr3:22221511-22221180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 137
               

               
Conread position:
               
320-636
               

               
Cow position:
               
chr3:48900146-48900479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 138
               

               
Conread position:
               
320-644
               

               
Cow position:
               
chr3:51492950-51492632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
7, 53
               

               
Conread position:
               
320-657
               

               
Cow position:
               
chr3:48810454-48810799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
49, 142
               

               
Conread position:
               
320-657
               

               
Cow position:
               
chr3:76713129-76713488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
320-685
               

               
Cow position:
               
chr3:12705363-12705736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
43, 116
               

               
Conread position:
               
320-717
               

               
Cow position:
               
chr3:68707837-68708230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 76
               

               
Conread position:
               
320-717
               

               
Cow position:
               
chr3:68880946-68881338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
10, 76
               

               
Conread position:
               
320-742
               

               
Cow position:
               
chr3:54946305-54945877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 61
               

               
Conread position:
               
320-744
               

               
Cow position:
               
chr3:21081196-21081634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
40, 220
               

               
Conread position:
               
320-744
               

               
Cow position:
               
chr3:29887255-29887673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
10, 96
               

               
Conread position:
               
320-744
               

               
Cow position:
               
chr3:59451782-59451345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
39, 112
               

               
Conread position:
               
320-744
               

               
Cow position:
               
chr3:59605026-59604621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
48, 134
               

               
Conread position:
               
320-746
               

               
Cow position:
               
chr3:15051768-15052196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 105
               

               
Conread position:
               
320-746
               

               
Cow position:
               
chr3:27274711-27274281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 134
               

               
Conread position:
               
320-746
               

               
Cow position:
               
chr3:59610536-59610975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
320-747
               

               
Cow position:
               
chr3:2396611-2397035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
47, 99
               

               
Conread position:
               
320-747
               

               
Cow position:
               
chr3:18725479-18725886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 45
               

               
Conread position:
               
320-747
               

               
Cow position:
               
chr3:23168882-23169322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 135
               

               
Conread position:
               
320-747
               

               
Cow position:
               
chr3:23471278-23471720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 132
               

               
Conread position:
               
320-747
               

               
Cow position:
               
chr3:26970995-26970573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 133
               

               
Conread position:
               
320-747
               

               
Cow position:
               
chr3:69750551-69750952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
51, 92
               

               
Conread position:
               
320-747
               

               
Cow position:
               
chr3:71496944-71497397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 145
               

               
Conread position:
               
320-754
               

               
Cow position:
               
chr3:29813410-29812984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 76
               

               
Conread position:
               
320-754
               

               
Cow position:
               
chr3:54881935-54881497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
42, 71
               

               
Conread position:
               
320-754
               

               
Cow position:
               
chr3:71247197-71246777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 120
               

               
Conread position:
               
320-774
               

               
Cow position:
               
chr3:73467810-73467339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 65
               

               
Conread position:
               
320-778
               

               
Cow position:
               
chr3:64172606-64172160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
90, 47
               

               
Conread position:
               
320-778
               

               
Cow position:
               
chr3:71238333-71237874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
321-507
               

               
Cow position:
               
chr3:29807916-29807727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
41, 126
               

               
Conread position:
               
321-531
               

               
Cow position:
               
chr3:40100546-40100760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
75, 44
               

               
Conread position:
               
321-550
               

               
Cow position:
               
chr3:24596250-24596477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
74, 37
               

               
Conread position:
               
321-611
               

               
Cow position:
               
chr3:3656699-3656394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
13, 136
               

               
Conread position:
               
321-621
               

               
Cow position:
               
chr3:54739717-54740015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
41, 69
               

               
Conread position:
               
321-669
               

               
Cow position:
               
chr3:58764903-58765250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 75
               

               
Conread position:
               
321-717
               

               
Cow position:
               
chr3:83215452-83215031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
49, 141
               

               
Conread position:
               
321-731
               

               
Cow position:
               
chr3:55373402-55373811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
151, 37
               

               
Conread position:
               
321-737
               

               
Cow position:
               
chr3:75480181-75479770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
47, 133
               

               
Conread position:
               
321-744
               

               
Cow position:
               
chr3:45882082-45881660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 135
               

               
Conread position:
               
321-747
               

               
Cow position:
               
chr3:13577036-13577438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 64
               

               
Conread position:
               
321-747
               

               
Cow position:
               
chr3:27532497-27532914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 46
               

               
Conread position:
               
321-747
               

               
Cow position:
               
chr3:45648287-45647887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 22
               

               
Conread position:
               
321-747
               

               
Cow position:
               
chr3:48579007-48578589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
137, 40
               

               
Conread position:
               
321-747
               

               
Cow position:
               
chr3:64280755-64281188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 98
               

               
Conread position:
               
321-747
               

               
Cow position:
               
chr3:80740736-80740320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
321-754
               

               
Cow position:
               
chr3:79884297-79884746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 133
               

               
Conread position:
               
321-774
               

               
Cow position:
               
chr3:56637816-56637386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
150, 49
               

               
Conread position:
               
321-778
               

               
Cow position:
               
chr3:48253062-48252610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 80
               

               
Conread position:
               
322-516
               

               
Cow position:
               
chr3:3401723-3401529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
40, 68
               

               
Conread position:
               
322-520
               

               
Cow position:
               
chr3:77276283-77276490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
41, 93
               

               
Conread position:
               
322-577
               

               
Cow position:
               
chr3:41550211-41550461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
8, 46
               

               
Conread position:
               
322-651
               

               
Cow position:
               
chr3:73299247-73298933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
38, 65
               

               
Conread position:
               
322-710
               

               
Cow position:
               
chr3:25477975-25477597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
9, 107
               

               
Conread position:
               
323-510
               

               
Cow position:
               
chr3:59681726-59681926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
38, 129
               

               
Conread position:
               
323-552
               

               
Cow position:
               
chr3:39247851-39248089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
35, 58
               

               
Conread position:
               
324-473
               

               
Cow position:
               
chr3:22903578-22903732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 126
               

               
Conread position:
               
324-474
               

               
Cow position:
               
chr3:18831599-18831445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
13, 73
               

               
Conread position:
               
324-475
               

               
Cow position:
               
chr3:54557846-54557693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
36, 69
               

               
Conread position:
               
324-479
               

               
Cow position:
               
chr3:12637684-12637524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 126
               

               
Conread position:
               
324-512
               

               
Cow position:
               
chr3:27246787-27246983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
39, 72
               

               
Conread position:
               
324-512
               

               
Cow position:
               
chr3:75966602-75966805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
39, 133
               

               
Conread position:
               
324-512
               

               
Cow position:
               
chr3:83325387-83325192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
37, 126
               

               
Conread position:
               
324-541
               

               
Cow position:
               
chr3:20841699-20841926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 127
               

               
Conread position:
               
324-571
               

               
Cow position:
               
chr3:27976348-27976604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 35
               

               
Conread position:
               
324-571
               

               
Cow position:
               
chr3:64197007-64196746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
12, 132
               

               
Conread position:
               
324-600
               

               
Cow position:
               
chr3:18059885-18059595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
11, 133
               

               
Conread position:
               
324-612
               

               
Cow position:
               
chr3:31361603-31361299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
39, 129
               

               
Conread position:
               
324-634
               

               
Cow position:
               
chr3:60389932-60389628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 60
               

               
Conread position:
               
324-639
               

               
Cow position:
               
chr3:70333789-70334108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
47, 211
               

               
Conread position:
               
324-652
               

               
Cow position:
               
chr3:76267794-76268139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
46, 132
               

               
Conread position:
               
324-657
               

               
Cow position:
               
chr3:4035928-4036239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
214, 46
               

               
Conread position:
               
324-672
               

               
Cow position:
               
chr3:36418307-36418643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
39, 128
               

               
Conread position:
               
324-672
               

               
Cow position:
               
chr3:68587200-68586846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 114
               

               
Conread position:
               
324-673
               

               
Cow position:
               
chr3:62046851-62046484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
39, 138
               

               
Conread position:
               
324-678
               

               
Cow position:
               
chr3:74205647-74205993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
159, 41
               

               
Conread position:
               
324-689
               

               
Cow position:
               
chr3:36375357-36375738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
11, 117
               

               
Conread position:
               
324-689
               

               
Cow position:
               
chr3:55712612-55712235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 44
               

               
Conread position:
               
324-689
               

               
Cow position:
               
chr3:57274239-57273872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 129
               

               
Conread position:
               
324-707
               

               
Cow position:
               
chr3:55318717-55319110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 117
               

               
Conread position:
               
324-724
               

               
Cow position:
               
chr3:59333939-59333538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 132
               

               
Conread position:
               
324-724
               

               
Cow position:
               
chr3:81087461-81087839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
37, 222
               

               
Conread position:
               
324-742
               

               
Cow position:
               
chr3:5365845-5365439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 41
               

               
Conread position:
               
324-743
               

               
Cow position:
               
chr3:30180264-30179835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 129
               

               
Conread position:
               
324-746
               

               
Cow position:
               
chr3:2518361-2518789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
44, 131
               

               
Conread position:
               
324-746
               

               
Cow position:
               
chr3:44932692-44932257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 130
               

               
Conread position:
               
324-746
               

               
Cow position:
               
chr3:68342099-68342506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
209, 46
               

               
Conread position:
               
324-747
               

               
Cow position:
               
chr3:2392789-2393218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 130
               

               
Conread position:
               
324-747
               

               
Cow position:
               
chr3:15654989-15655404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
37, 65
               

               
Conread position:
               
324-747
               

               
Cow position:
               
chr3:37186988-37186581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
86, 46
               

               
Conread position:
               
324-747
               

               
Cow position:
               
chr3:49482533-49482963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
10, 117
               

               
Conread position:
               
324-747
               

               
Cow position:
               
chr3:71231578-71231154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 134
               

               
Conread position:
               
324-747
               

               
Cow position:
               
chr3:75080932-75080514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
47, 101
               

               
Conread position:
               
324-747
               

               
Cow position:
               
chr3:82019662-82020096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 128
               

               
Conread position:
               
324-747
               

               
Cow position:
               
chr3:83491260-83490824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 126
               

               
Conread position:
               
324-754
               

               
Cow position:
               
chr3:2025384-2024925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
10, 120
               

               
Conread position:
               
324-754
               

               
Cow position:
               
chr3:13301669-13302115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
36, 64
               

               
Conread position:
               
324-754
               

               
Cow position:
               
chr3:50768859-50768419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
47, 131
               

               
Conread position:
               
324-754
               

               
Cow position:
               
chr3:57754295-57754743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
39, 115
               

               
Conread position:
               
324-763
               

               
Cow position:
               
chr3:48241787-48241353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
324-775
               

               
Cow position:
               
chr3:67744461-67744909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 71
               

               
Conread position:
               
324-795
               

               
Cow position:
               
chr3:210503-210021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 135
               

               
Conread position:
               
324-795
               

               
Cow position:
               
chr3:65058879-65058401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 132
               

               
Conread position:
               
325-479
               

               
Cow position:
               
chr3:31804591-31804744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
36, 71
               

               
Conread position:
               
325-479
               

               
Cow position:
               
chr3:68624399-68624232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
9, 133
               

               
Conread position:
               
325-480
               

               
Cow position:
               
chr3:40343859-40344016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 33
               

               
Conread position:
               
325-533
               

               
Cow position:
               
chr3:52457088-52456873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
37, 113
               

               
Conread position:
               
325-547
               

               
Cow position:
               
chr3:71423390-71423609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 63
               

               
Conread position:
               
325-600
               

               
Cow position:
               
chr3:57704511-57704216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
37, 129
               

               
Conread position:
               
325-623
               

               
Cow position:
               
chr3:9074185-9074472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
156, 42
               

               
Conread position:
               
325-636
               

               
Cow position:
               
chr3:76156165-76155846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 129
               

               
Conread position:
               
325-685
               

               
Cow position:
               
chr3:68156906-68156551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
37, 134
               

               
Conread position:
               
325-717
               

               
Cow position:
               
chr3:2199043-2198660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
69, 42
               

               
Conread position:
               
325-734
               

               
Cow position:
               
chr3:8924201-8923804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
123, 40
               

               
Conread position:
               
325-737
               

               
Cow position:
               
chr3:77006674-77006263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
38, 166
               

               
Conread position:
               
325-743
               

               
Cow position:
               
chr3:26066166-26065753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
37, 89
               

               
Conread position:
               
325-744
               

               
Cow position:
               
chr3:18687080-18686667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 125
               

               
Conread position:
               
325-747
               

               
Cow position:
               
chr3:2506297-2506733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 133
               

               
Conread position:
               
325-747
               

               
Cow position:
               
chr3:16343770-16343364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
185, 43
               

               
Conread position:
               
325-747
               

               
Cow position:
               
chr3:74234360-74233943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 125
               

               
Conread position:
               
325-753
               

               
Cow position:
               
chr3:56583027-56582585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 116
               

               
Conread position:
               
325-754
               

               
Cow position:
               
chr3:54435147-54434714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 168
               

               
Conread position:
               
325-762
               

               
Cow position:
               
chr3:53150512-53150060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
38, 132
               

               
Conread position:
               
325-795
               

               
Cow position:
               
chr3:21302264-21302732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
38, 91
               

               
Conread position:
               
326-460
               

               
Cow position:
               
chr3:22821031-22820890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
326-461
               

               
Cow position:
               
chr3:24370569-24370434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
32, 67
               

               
Conread position:
               
326-473
               

               
Cow position:
               
chr3:43895885-43896039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 126
               

               
Conread position:
               
326-546
               

               
Cow position:
               
chr3:69650720-69650947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
67, 32
               

               
Conread position:
               
326-626
               

               
Cow position:
               
chr3:7662035-7661721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
32, 134
               

               
Conread position:
               
326-626
               

               
Cow position:
               
chr3:73237361-73237063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
154, 36
               

               
Conread position:
               
326-635
               

               
Cow position:
               
chr3:74939760-74939417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
8, 241
               

               
Conread position:
               
326-663
               

               
Cow position:
               
chr3:2648330-2648684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 126
               

               
Conread position:
               
326-672
               

               
Cow position:
               
chr3:70761945-70762300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
37, 131
               

               
Conread position:
               
326-674
               

               
Cow position:
               
chr3:18426522-18426880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 181
               

               
Conread position:
               
326-678
               

               
Cow position:
               
chr3:24872869-24872534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 10
               

               
Conread position:
               
326-679
               

               
Cow position:
               
chr3:15751545-15751906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 32
               

               
Conread position:
               
326-679
               

               
Cow position:
               
chr3:54506884-54506525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
37, 128
               

               
Conread position:
               
326-743
               

               
Cow position:
               
chr3:48363247-48362835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
36, 126
               

               
Conread position:
               
326-746
               

               
Cow position:
               
chr3:26904277-26903864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 51
               

               
Conread position:
               
326-747
               

               
Cow position:
               
chr3:16333983-16333554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
13, 137
               

               
Conread position:
               
326-747
               

               
Cow position:
               
chr3:23091819-23092235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
155, 44
               

               
Conread position:
               
326-747
               

               
Cow position:
               
chr3:39171324-39171736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
326-747
               

               
Cow position:
               
chr3:51233926-51234348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 87
               

               
Conread position:
               
326-747
               

               
Cow position:
               
chr3:54781815-54782262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
42, 139
               

               
Conread position:
               
326-774
               

               
Cow position:
               
chr3:57764391-57763943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 100
               

               
Conread position:
               
327-496
               

               
Cow position:
               
chr3:19611176-19611354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
36, 127
               

               
Conread position:
               
327-524
               

               
Cow position:
               
chr3:23640516-23640314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
30, 124
               

               
Conread position:
               
327-530
               

               
Cow position:
               
chr3:54905784-54905576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
7, 68
               

               
Conread position:
               
327-536
               

               
Cow position:
               
chr3:909472-909681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
327-538
               

               
Cow position:
               
chr3:53904612-53904407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
137, 31
               

               
Conread position:
               
327-589
               

               
Cow position:
               
chr3:75777892-75778157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
36, 67
               

               
Conread position:
               
327-621
               

               
Cow position:
               
chr3:14194013-14194305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
36, 20
               

               
Conread position:
               
327-636
               

               
Cow position:
               
chr3:1517335-1517655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
12, 110
               

               
Conread position:
               
327-639
               

               
Cow position:
               
chr3:15443549-15443875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
36, 130
               

               
Conread position:
               
327-653
               

               
Cow position:
               
chr3:20993972-20993653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
85, 40
               

               
Conread position:
               
327-675
               

               
Cow position:
               
chr3:19793074-19792712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 121
               

               
Conread position:
               
327-721
               

               
Cow position:
               
chr3:38864295-38863891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
44, 120
               

               
Conread position:
               
327-734
               

               
Cow position:
               
chr3:53790365-53790780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
43, 123
               

               
Conread position:
               
327-742
               

               
Cow position:
               
chr3:50614800-50614392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 40
               

               
Conread position:
               
327-743
               

               
Cow position:
               
chr3:45308103-45307686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
30, 112
               

               
Conread position:
               
327-747
               

               
Cow position:
               
chr3:8393516-8393094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 21
               

               
Conread position:
               
327-747
               

               
Cow position:
               
chr3:18067307-18066882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 126
               

               
Conread position:
               
327-747
               

               
Cow position:
               
chr3:77225271-77224868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
7, 41
               

               
Conread position:
               
327-748
               

               
Cow position:
               
chr3:13329616-13330026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 87
               

               
Conread position:
               
327-754
               

               
Cow position:
               
chr3:8061297-8060873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 124
               

               
Conread position:
               
327-756
               

               
Cow position:
               
chr3:29359987-29360400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 58
               

               
Conread position:
               
327-759
               

               
Cow position:
               
chr3:52651903-52652338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 128
               

               
Conread position:
               
327-762
               

               
Cow position:
               
chr3:39066506-39066066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
36, 127
               

               
Conread position:
               
327-777
               

               
Cow position:
               
chr3:59608655-59608225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 42
               

               
Conread position:
               
327-806
               

               
Cow position:
               
chr3:12255630-12255168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
306, 62
               

               
Conread position:
               
328-495
               

               
Cow position:
               
chr3:5900287-5900123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 62
               

               
Conread position:
               
328-506
               

               
Cow position:
               
chr3:70402814-70402633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
34, 122
               

               
Conread position:
               
328-538
               

               
Cow position:
               
chr3:16107198-16107407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
6, 103
               

               
Conread position:
               
328-552
               

               
Cow position:
               
chr3:35075048-35074816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
34, 79
               

               
Conread position:
               
328-600
               

               
Cow position:
               
chr3:65019676-65019972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
6, 238
               

               
Conread position:
               
328-644
               

               
Cow position:
               
chr3:24468208-24468528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
36, 128
               

               
Conread position:
               
328-652
               

               
Cow position:
               
chr3:19586040-19585704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 130
               

               
Conread position:
               
328-653
               

               
Cow position:
               
chr3:15153865-15153534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 125
               

               
Conread position:
               
328-655
               

               
Cow position:
               
chr3:58973452-58973143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
156, 37
               

               
Conread position:
               
328-710
               

               
Cow position:
               
chr3:23105189-23105581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
42, 124
               

               
Conread position:
               
328-734
               

               
Cow position:
               
chr3:78092335-78092745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 121
               

               
Conread position:
               
328-744
               

               
Cow position:
               
chr3:42584695-42584293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
102, 39
               

               
Conread position:
               
328-746
               

               
Cow position:
               
chr3:23734913-23735354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
42, 109
               

               
Conread position:
               
328-747
               

               
Cow position:
               
chr3:2008454-2008017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
29, 195
               

               
Conread position:
               
328-747
               

               
Cow position:
               
chr3:14553048-14552626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 126
               

               
Conread position:
               
328-747
               

               
Cow position:
               
chr3:14632805-14633239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
328-747
               

               
Cow position:
               
chr3:18393224-18393636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 95
               

               
Conread position:
               
328-747
               

               
Cow position:
               
chr3:18459361-18459772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
32, 85
               

               
Conread position:
               
328-747
               

               
Cow position:
               
chr3:31309178-31309607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 127
               

               
Conread position:
               
328-747
               

               
Cow position:
               
chr3:51578147-51578573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 113
               

               
Conread position:
               
328-754
               

               
Cow position:
               
chr3:25690977-25690526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
6, 237
               

               
Conread position:
               
328-761
               

               
Cow position:
               
chr3:31225598-31225183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
32, 53
               

               
Conread position:
               
328-762
               

               
Cow position:
               
chr3:15228665-15229086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 39
               

               
Conread position:
               
328-762
               

               
Cow position:
               
chr3:39969687-39970139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 128
               

               
Conread position:
               
328-774
               

               
Cow position:
               
chr3:80565127-80564683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 12
               

               
Conread position:
               
328-785
               

               
Cow position:
               
chr3:53384103-53384575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
6, 111
               

               
Conread position:
               
329-472
               

               
Cow position:
               
chr3:19435283-19435138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
70, 32
               

               
Conread position:
               
329-476
               

               
Cow position:
               
chr3:45168737-45168586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
34, 79
               

               
Conread position:
               
329-479
               

               
Cow position:
               
chr3:31352709-31352860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
61, 29
               

               
Conread position:
               
329-554
               

               
Cow position:
               
chr3:56948921-56949153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
31, 118
               

               
Conread position:
               
329-588
               

               
Cow position:
               
chr3:4549192-4548920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
67, 39
               

               
Conread position:
               
329-629
               

               
Cow position:
               
chr3:22165239-22165553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
5, 129
               

               
Conread position:
               
329-656
               

               
Cow position:
               
chr3:61322993-61322684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
32, 61
               

               
Conread position:
               
329-710
               

               
Cow position:
               
chr3:70609800-70609407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
40, 127
               

               
Conread position:
               
329-737
               

               
Cow position:
               
chr3:53222187-53221772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
41, 124
               

               
Conread position:
               
329-743
               

               
Cow position:
               
chr3:17936672-17937087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
42, 120
               

               
Conread position:
               
329-743
               

               
Cow position:
               
chr3:43233678-43233255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
34, 118
               

               
Conread position:
               
329-744
               

               
Cow position:
               
chr3:73395290-73394867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 125
               

               
Conread position:
               
329-747
               

               
Cow position:
               
chr3:15159204-15158789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
329-747
               

               
Cow position:
               
chr3:28908041-28908447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 62
               

               
Conread position:
               
329-747
               

               
Cow position:
               
chr3:37041591-37041175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 123
               

               
Conread position:
               
329-747
               

               
Cow position:
               
chr3:54862265-54862674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
15, 50
               

               
Conread position:
               
329-753
               

               
Cow position:
               
chr3:9662994-9663445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
41, 112
               

               
Conread position:
               
329-754
               

               
Cow position:
               
chr3:6853339-6853760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 161
               

               
Conread position:
               
329-754
               

               
Cow position:
               
chr3:14601537-14601973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 29
               

               
Conread position:
               
329-762
               

               
Cow position:
               
chr3:23408189-23408609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
49, 120
               

               
Conread position:
               
329-785
               

               
Cow position:
               
chr3:53910281-53909822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 107
               

               
Conread position:
               
330-505
               

               
Cow position:
               
chr3:25037829-25038009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
72, 28
               

               
Conread position:
               
330-548
               

               
Cow position:
               
chr3:23753658-23753441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
27, 77
               

               
Conread position:
               
330-552
               

               
Cow position:
               
chr3:15160691-15160459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
33, 122
               

               
Conread position:
               
330-747
               

               
Cow position:
               
chr3:22675933-22676334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 128
               

               
Conread position:
               
330-747
               

               
Cow position:
               
chr3:36100985-36100576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
31, 61
               

               
Conread position:
               
330-754
               

               
Cow position:
               
chr3:20802466-20802889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 84
               

               
Conread position:
               
332-460
               

               
Cow position:
               
chr3:83921488-83921360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
13, 99
               

               
Conread position:
               
332-514
               

               
Cow position:
               
chr3:80023143-80023335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
58, 44
               

               
Conread position:
               
332-562
               

               
Cow position:
               
chr3:11716146-11715925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
147, 26
               

               
Conread position:
               
332-580
               

               
Cow position:
               
chr3:14547171-14546913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
31, 119
               

               
Conread position:
               
332-597
               

               
Cow position:
               
chr3:56483673-56483410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
78, 35
               

               
Conread position:
               
332-597
               

               
Cow position:
               
chr3:75238633-75238354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 127
               

               
Conread position:
               
332-633
               

               
Cow position:
               
chr3:17058375-17058678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
39, 122
               

               
Conread position:
               
332-636
               

               
Cow position:
               
chr3:3889405-3889708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
31, 64
               

               
Conread position:
               
332-650
               

               
Cow position:
               
chr3:74846553-74846867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 35
               

               
Conread position:
               
332-747
               

               
Cow position:
               
chr3:60597709-60597296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 119
               

               
Conread position:
               
332-754
               

               
Cow position:
               
chr3:6873099-6873504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 29
               

               
Conread position:
               
332-778
               

               
Cow position:
               
chr3:74533506-74533063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
39, 81
               

               
Conread position:
               
332-797
               

               
Cow position:
               
chr3:72592-72109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 64
               

               
Conread position:
               
333-657
               

               
Cow position:
               
chr3:68616164-68616487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
35, 117
               

               
Conread position:
               
333-689
               

               
Cow position:
               
chr3:14599091-14598756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 25
               

               
Conread position:
               
333-747
               

               
Cow position:
               
chr3:65237194-65236773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 121
               

               
Conread position:
               
333-773
               

               
Cow position:
               
chr3:30463005-30463445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
38, 222
               

               
Conread position:
               
333-774
               

               
Cow position:
               
chr3:75158526-75158085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 124
               

               
Conread position:
               
334-551
               

               
Cow position:
               
chr3:10668709-10668941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
29, 124
               

               
Conread position:
               
334-743
               

               
Cow position:
               
chr3:55124115-55124526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 102
               

               
Conread position:
               
334-747
               

               
Cow position:
               
chr3:45647836-45647424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
157, 52
               

               
Conread position:
               
334-747
               

               
Cow position:
               
chr3:74500427-74499972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
26, 56
               

               
Conread position:
               
335-519
               

               
Cow position:
               
chr3:20021437-20021238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
40, 119
               

               
Conread position:
               
335-672
               

               
Cow position:
               
chr3:76922504-76922840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
28, 61
               

               
Conread position:
               
335-788
               

               
Cow position:
               
chr3:56476843-56476389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 60
               

               
Conread position:
               
339-747
               

               
Cow position:
               
chr3:77271122-77271519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
340-660
               

               
Cow position:
               
chr3:61323489-61323171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
54, 13
               

               
Conread position:
               
340-754
               

               
Cow position:
               
chr3:59000599-59001005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 75
               

               
Conread position:
               
340-778
               

               
Cow position:
               
chr3:4032125-4031683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 94
               

               
Conread position:
               
342-739
               

               
Cow position:
               
chr3:55010014-55010399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
23, 61
               

               
Conread position:
               
343-578
               

               
Cow position:
               
chr3:48477882-48478117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
30, 15
               

               
Conread position:
               
343-742
               

               
Cow position:
               
chr3:82055967-82056365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 49
               

               
Conread position:
               
343-747
               

               
Cow position:
               
chr3:53046497-53046909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 117
               

               
Conread position:
               
343-796
               

               
Cow position:
               
chr3:7566260-7566721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 108
               

               
Conread position:
               
344-535
               

               
Cow position:
               
chr3:39988092-39988282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
18, 64
               

               
Conread position:
               
345-743
               

               
Cow position:
               
chr3:78945688-78946084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 143
               

               
Conread position:
               
345-754
               

               
Cow position:
               
chr3:59206382-59205981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
136, 63
               

               
Conread position:
               
345-785
               

               
Cow position:
               
chr3:53572596-53573042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
60, 107
               

               
Conread position:
               
351-479
               

               
Cow position:
               
chr3:35582989-35582855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 100
               

               
Conread position:
               
356-580
               

               
Cow position:
               
chr3:11640879-11640641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
5, 99
               

               
Conread position:
               
357-636
               

               
Cow position:
               
chr3:13890621-13890334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 95
               

               
Conread position:
               
357-730
               

               
Cow position:
               
chr3:11712085-11711718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 22
               

               
Conread position:
               
358-586
               

               
Cow position:
               
chr3:23203089-23203329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
32, 84
               

               
Conread position:
               
358-688
               

               
Cow position:
               
chr3:35153746-35153420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
121, 32
               

               
Conread position:
               
360-635
               

               
Cow position:
               
chr3:19793452-19793731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
34, 90
               

               
Conread position:
               
360-679
               

               
Cow position:
               
chr3:44102105-44101785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 71
               

               
Conread position:
               
360-709
               

               
Cow position:
               
chr3:83846033-83845690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
124, 52
               

               
Conread position:
               
360-719
               

               
Cow position:
               
chr3:56612501-56612132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
38, 68
               

               
Conread position:
               
360-744
               

               
Cow position:
               
chr3:57577834-57577445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
30, 7
               

               
Conread position:
               
360-747
               

               
Cow position:
               
chr3:2675170-2674777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 92
               

               
Conread position:
               
360-747
               

               
Cow position:
               
chr3:53270971-53270574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
360-754
               

               
Cow position:
               
chr3:64010672-64011076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
36, 80
               

               
Conread position:
               
360-754
               

               
Cow position:
               
chr3:65413136-65413535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 93
               

               
Conread position:
               
361-582
               

               
Cow position:
               
chr3:84250412-84250633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
119, 83
               

               
Conread position:
               
361-689
               

               
Cow position:
               
chr3:74079501-74079833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
40, 87
               

               
Conread position:
               
361-744
               

               
Cow position:
               
chr3:49650520-49650130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 40
               

               
Conread position:
               
362-747
               

               
Cow position:
               
chr3:5044674-5045062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
43, 75
               

               
Conread position:
               
364-605
               

               
Cow position:
               
chr3:27727700-27727940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
22, 84
               

               
Conread position:
               
368-754
               

               
Cow position:
               
chr3:26681685-26682053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
34, 82
               

               
Conread position:
               
368-754
               

               
Cow position:
               
chr3:32585275-32584899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
122, 76
               

               
Conread position:
               
371-679
               

               
Cow position:
               
chr3:20677722-20678019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
104, 19
               

               
Conread position:
               
373-747
               

               
Cow position:
               
chr3:53739069-53739442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 36
               

               
Conread position:
               
373-747
               

               
Cow position:
               
chr3:73709172-73708797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
374-764
               

               
Cow position:
               
chr3:82461300-82460914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 71
               

               
Conread position:
               
378-638
               

               
Cow position:
               
chr3:5366883-5366628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
102, 66
               

               
Conread position:
               
378-743
               

               
Cow position:
               
chr3:70565622-70565986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
26, 67
               

               
Conread position:
               
378-754
               

               
Cow position:
               
chr3:1830461-1830822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
42, 49
               

               
Conread position:
               
378-754
               

               
Cow position:
               
chr3:28898107-28898482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
29, 67
               

               
Conread position:
               
382-741
               

               
Cow position:
               
chr3:55835709-55836075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 65
               

               
Conread position:
               
382-744
               

               
Cow position:
               
chr3:15752525-15752877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 62
               

               
Conread position:
               
382-778
               

               
Cow position:
               
chr3:61279019-61278621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
99, 58
               

               
Conread position:
               
383-651
               

               
Cow position:
               
chr3:43727181-43726922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
46, 81
               

               
Conread position:
               
386-762
               

               
Cow position:
               
chr3:17895956-17895587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
386-774
               

               
Cow position:
               
chr3:35852363-35852747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
15, 67
               

               
Conread position:
               
386-788
               

               
Cow position:
               
chr3:55271938-55272335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
105, 58
               

               
Conread position:
               
387-747
               

               
Cow position:
               
chr3:80053438-80053786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
93, 24
               

               
Conread position:
               
388-764
               

               
Cow position:
               
chr3:53538615-53538254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
93, 22
               

               
Conread position:
               
389-549
               

               
Cow position:
               
chr3:21997684-21997847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
86, 55
               

               
Conread position:
               
389-599
               

               
Cow position:
               
chr3:7428102-7427892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
99, 55
               

               
Conread position:
               
389-624
               

               
Cow position:
               
chr3:16254737-16254953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
389-636
               

               
Cow position:
               
chr3:8733255-8733496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
91, 55
               

               
Conread position:
               
389-678
               

               
Cow position:
               
chr3:84596862-84597143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
90, 20
               

               
Conread position:
               
389-699
               

               
Cow position:
               
chr3:57760602-57760294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
95, 55
               

               
Conread position:
               
389-699
               

               
Cow position:
               
chr3:61169903-61169598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
87, 54
               

               
Conread position:
               
389-720
               

               
Cow position:
               
chr3:74134808-74134480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
75, 55
               

               
Conread position:
               
389-743
               

               
Cow position:
               
chr3:56059915-56059559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 54
               

               
Conread position:
               
389-747
               

               
Cow position:
               
chr3:17934835-17935175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 20
               

               
Conread position:
               
389-747
               

               
Cow position:
               
chr3:24852493-24852839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
29, 38
               

               
Conread position:
               
389-747
               

               
Cow position:
               
chr3:68627584-68627927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 58
               

               
Conread position:
               
389-754
               

               
Cow position:
               
chr3:81470992-81471360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 57
               

               
Conread position:
               
389-778
               

               
Cow position:
               
chr3:73442992-73443372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
87, 57
               

               
Conread position:
               
389-785
               

               
Cow position:
               
chr3:49218201-49218599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
89, 27
               

               
Conread position:
               
390-515
               

               
Cow position:
               
chr3:44243623-44243495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
94, 54
               

               
Conread position:
               
390-527
               

               
Cow position:
               
chr3:82360371-82360244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
390-610
               

               
Cow position:
               
chr3:33693922-33693702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
89, 54
               

               
Conread position:
               
390-615
               

               
Cow position:
               
chr3:10104143-10103927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
90, 54
               

               
Conread position:
               
390-622
               

               
Cow position:
               
chr3:35621405-35621175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
14, 57
               

               
Conread position:
               
390-628
               

               
Cow position:
               
chr3:84175719-84175959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
18, 55
               

               
Conread position:
               
390-636
               

               
Cow position:
               
chr3:79645327-79645583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
57, 161
               

               
Conread position:
               
390-651
               

               
Cow position:
               
chr3:26874694-26874433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
20, 55
               

               
Conread position:
               
390-654
               

               
Cow position:
               
chr3:2638029-2637751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
94, 56
               

               
Conread position:
               
390-656
               

               
Cow position:
               
chr3:53240361-53240105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
8, 78
               

               
Conread position:
               
390-657
               

               
Cow position:
               
chr3:59883967-59884235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 20
               

               
Conread position:
               
390-690
               

               
Cow position:
               
chr3:76387507-76387791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
137, 20
               

               
Conread position:
               
390-703
               

               
Cow position:
               
chr3:24935467-24935164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
94, 32
               

               
Conread position:
               
390-708
               

               
Cow position:
               
chr3:4319813-4319497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
94, 20
               

               
Conread position:
               
390-710
               

               
Cow position:
               
chr3:46005918-46006246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
390-718
               

               
Cow position:
               
chr3:60265151-60265459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
94, 54
               

               
Conread position:
               
390-725
               

               
Cow position:
               
chr3:59621545-59621866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
93, 56
               

               
Conread position:
               
390-725
               

               
Cow position:
               
chr3:67930082-67930407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 56
               

               
Conread position:
               
390-730
               

               
Cow position:
               
chr3:17447512-17447843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
85, 54
               

               
Conread position:
               
390-734
               

               
Cow position:
               
chr3:70334592-70334940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
94, 53
               

               
Conread position:
               
390-743
               

               
Cow position:
               
chr3:2680616-2680263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
95, 54
               

               
Conread position:
               
390-743
               

               
Cow position:
               
chr3:80072234-80071868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
14, 56
               

               
Conread position:
               
390-744
               

               
Cow position:
               
chr3:78894238-78894563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
17, 54
               

               
Conread position:
               
390-747
               

               
Cow position:
               
chr3:58968802-58969148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
100, 23
               

               
Conread position:
               
390-747
               

               
Cow position:
               
chr3:59630410-59630751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 54
               

               
Conread position:
               
390-747
               

               
Cow position:
               
chr3:66707964-66708324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
91, 60
               

               
Conread position:
               
390-747
               

               
Cow position:
               
chr3:67543767-67544126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
98, 36
               

               
Conread position:
               
390-747
               

               
Cow position:
               
chr3:67704649-67704288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 54
               

               
Conread position:
               
390-747
               

               
Cow position:
               
chr3:70899993-70899648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
85, 47
               

               
Conread position:
               
390-754
               

               
Cow position:
               
chr3:46901299-46900935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
93, 20
               

               
Conread position:
               
390-754
               

               
Cow position:
               
chr3:61144197-61143834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 54
               

               
Conread position:
               
390-754
               

               
Cow position:
               
chr3:75045773-75046130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
56, 133
               

               
Conread position:
               
390-769
               

               
Cow position:
               
chr3:58540419-58540808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 61
               

               
Conread position:
               
390-786
               

               
Cow position:
               
chr3:17222036-17222436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 158
               

               
Conread position:
               
390-803
               

               
Cow position:
               
chr3:37599326-37599725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
94, 11
               

               
Conread position:
               
391-567
               

               
Cow position:
               
chr3:61467089-61467266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
391-581
               

               
Cow position:
               
chr3:74900541-74900726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
92, 39
               

               
Conread position:
               
391-689
               

               
Cow position:
               
chr3:66883841-66884135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
14, 54
               

               
Conread position:
               
391-692
               

               
Cow position:
               
chr3:30222292-30221989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
99, 19
               

               
Conread position:
               
391-744
               

               
Cow position:
               
chr3:75570352-75570691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 19
               

               
Conread position:
               
391-746
               

               
Cow position:
               
chr3:43571850-43571489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 38
               

               
Conread position:
               
391-747
               

               
Cow position:
               
chr3:19006759-19006415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
83, 57
               

               
Conread position:
               
391-747
               

               
Cow position:
               
chr3:53113277-53112917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
29, 36
               

               
Conread position:
               
391-747
               

               
Cow position:
               
chr3:57624566-57624215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 53
               

               
Conread position:
               
391-778
               

               
Cow position:
               
chr3:69961634-69961996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
16, 54
               

               
Conread position:
               
391-795
               

               
Cow position:
               
chr3:5100670-5101061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 53
               

               
Conread position:
               
392-548
               

               
Cow position:
               
chr3:64373055-64373215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
392-553
               

               
Cow position:
               
chr3:21642088-21641921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
92, 52
               

               
Conread position:
               
392-600
               

               
Cow position:
               
chr3:55984199-55983988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
83, 52
               

               
Conread position:
               
392-743
               

               
Cow position:
               
chr3:5097307-5096956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 18
               

               
Conread position:
               
392-744
               

               
Cow position:
               
chr3:48296799-48296460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 51
               

               
Conread position:
               
392-747
               

               
Cow position:
               
chr3:12711814-12712175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 52
               

               
Conread position:
               
392-747
               

               
Cow position:
               
chr3:14626049-14626404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
392-774
               

               
Cow position:
               
chr3:52863082-52863463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
392-778
               

               
Cow position:
               
chr3:33632807-33633169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
70, 61
               

               
Conread position:
               
393-545
               

               
Cow position:
               
chr3:67959822-67959973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
91, 19
               

               
Conread position:
               
393-548
               

               
Cow position:
               
chr3:23667720-23667560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
91, 26
               

               
Conread position:
               
393-639
               

               
Cow position:
               
chr3:72503796-72504041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
88, 53
               

               
Conread position:
               
393-644
               

               
Cow position:
               
chr3:54100626-54100871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
92, 51
               

               
Conread position:
               
393-685
               

               
Cow position:
               
chr3:63269323-63269035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
393-724
               

               
Cow position:
               
chr3:27940043-27940357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
106, 51
               

               
Conread position:
               
393-754
               

               
Cow position:
               
chr3:70401996-70401643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 53
               

               
Conread position:
               
393-774
               

               
Cow position:
               
chr3:66375421-66375041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
394-552
               

               
Cow position:
               
chr3:56704222-56704387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
87, 50
               

               
Conread position:
               
394-747
               

               
Cow position:
               
chr3:55970605-55970252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 32
               

               
Conread position:
               
395-582
               

               
Cow position:
               
chr3:53703866-53704055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
89, 27
               

               
Conread position:
               
395-679
               

               
Cow position:
               
chr3:58767361-58767084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
81, 51
               

               
Conread position:
               
395-740
               

               
Cow position:
               
chr3:38691308-38691651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 53
               

               
Conread position:
               
395-747
               

               
Cow position:
               
chr3:29596488-29596142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
19, 33
               

               
Conread position:
               
396-658
               

               
Cow position:
               
chr3:74243089-74242832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
89, 26
               

               
Conread position:
               
396-734
               

               
Cow position:
               
chr3:7678750-7678432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
92, 48
               

               
Conread position:
               
397-636
               

               
Cow position:
               
chr3:73820274-73820511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
397-753
               

               
Cow position:
               
chr3:59208890-59208556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
296, 36
               

               
Conread position:
               
398-747
               

               
Cow position:
               
chr3:63179937-63179616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
234, 48
               

               
Conread position:
               
398-789
               

               
Cow position:
               
chr3:62826524-62826919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
71, 46
               

               
Conread position:
               
399-717
               

               
Cow position:
               
chr3:49139943-49140259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
74, 41
               

               
Conread position:
               
399-723
               

               
Cow position:
               
chr3:15192674-15192336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
137, 85
               

               
Conread position:
               
399-809
               

               
Cow position:
               
chr3:2216462-2216044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
18, 28
               

               
Conread position:
               
400-746
               

               
Cow position:
               
chr3:26218960-26219313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
75, 21
               

               
Conread position:
               
400-747
               

               
Cow position:
               
chr3:33327802-33327452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
83, 49
               

               
Conread position:
               
400-754
               

               
Cow position:
               
chr3:34271007-34270671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 132
               

               
Conread position:
               
400-774
               

               
Cow position:
               
chr3:42423235-42423611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
401-747
               

               
Cow position:
               
chr3:25755112-25754784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
49, 85
               

               
Conread position:
               
401-747
               

               
Cow position:
               
chr3:62292033-62292368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
11, 44
               

               
Conread position:
               
401-778
               

               
Cow position:
               
chr3:36671903-36672290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
402-556
               

               
Cow position:
               
chr3:11292157-11292313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
82, 42
               

               
Conread position:
               
403-733
               

               
Cow position:
               
chr3:71135876-71135550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
78, 41
               

               
Conread position:
               
403-742
               

               
Cow position:
               
chr3:8394032-8393692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 46
               

               
Conread position:
               
403-743
               

               
Cow position:
               
chr3:55085080-55085432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
86, 25
               

               
Conread position:
               
403-747
               

               
Cow position:
               
chr3:23477080-23476746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 52
               

               
Conread position:
               
403-747
               

               
Cow position:
               
chr3:51255869-51255532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
81, 41
               

               
Conread position:
               
403-747
               

               
Cow position:
               
chr3:53588295-53588642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
78, 10
               

               
Conread position:
               
403-747
               

               
Cow position:
               
chr3:58285819-58286150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
78, 41
               

               
Conread position:
               
403-754
               

               
Cow position:
               
chr3:20471275-20471619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
59, 46
               

               
Conread position:
               
403-762
               

               
Cow position:
               
chr3:69416692-69417055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
403-764
               

               
Cow position:
               
chr3:59588600-59588250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
82, 41
               

               
Conread position:
               
403-766
               

               
Cow position:
               
chr3:27785356-27785006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
83, 46
               

               
Conread position:
               
404-721
               

               
Cow position:
               
chr3:26960499-26960821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
80, 35
               

               
Conread position:
               
404-747
               

               
Cow position:
               
chr3:8457743-8457404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
80, 40
               

               
Conread position:
               
404-751
               

               
Cow position:
               
chr3:55991779-55992127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
77, 40
               

               
Conread position:
               
404-754
               

               
Cow position:
               
chr3:72391171-72390821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
81, 40
               

               
Conread position:
               
404-774
               

               
Cow position:
               
chr3:80581744-80581391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 40
               

               
Conread position:
               
405-743
               

               
Cow position:
               
chr3:54771093-54770756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
103, 14
               

               
Conread position:
               
405-747
               

               
Cow position:
               
chr3:10347443-10347103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 138
               

               
Conread position:
               
405-754
               

               
Cow position:
               
chr3:66292088-66292438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
70, 39
               

               
Conread position:
               
405-756
               

               
Cow position:
               
chr3:49383037-49382687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
76, 34
               

               
Conread position:
               
407-676
               

               
Cow position:
               
chr3:34669647-34669909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 37
               

               
Conread position:
               
407-747
               

               
Cow position:
               
chr3:59101913-59101581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
91, 37
               

               
Conread position:
               
407-778
               

               
Cow position:
               
chr3:38347276-38346916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
77, 37
               

               
Conread position:
               
410-679
               

               
Cow position:
               
chr3:74502242-74502506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
74, 34
               

               
Conread position:
               
412-747
               

               
Cow position:
               
chr3:59799329-59799002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
76, 32
               

               
Conread position:
               
413-643
               

               
Cow position:
               
chr3:46541749-46541976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
71, 31
               

               
Conread position:
               
413-747
               

               
Cow position:
               
chr3:72676171-72675835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
413-774
               

               
Cow position:
               
chr3:79292908-79292554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 31
               

               
Conread position:
               
413-778
               

               
Cow position:
               
chr3:61840355-61840004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
414-636
               

               
Cow position:
               
chr3:71238548-71238332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
414-754
               

               
Cow position:
               
chr3:27545740-27546093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 35
               

               
Conread position:
               
416-641
               

               
Cow position:
               
chr3:80468601-80468821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
69, 28
               

               
Conread position:
               
416-657
               

               
Cow position:
               
chr3:31850301-31850532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
70, 10
               

               
Conread position:
               
416-778
               

               
Cow position:
               
chr3:71430127-71430496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
67, 25
               

               
Conread position:
               
417-771
               

               
Cow position:
               
chr3:65800662-65800316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 67
               

               
Conread position:
               
418-611
               

               
Cow position:
               
chr3:75047998-75047801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
418-689
               

               
Cow position:
               
chr3:10896897-10896638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
65, 26
               

               
Conread position:
               
420-679
               

               
Cow position:
               
chr3:7940484-7940740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
60, 24
               

               
Conread position:
               
420-697
               

               
Cow position:
               
chr3:3638251-3637984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
220, 26
               

               
Conread position:
               
420-746
               

               
Cow position:
               
chr3:15684849-15685169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
64, 24
               

               
Conread position:
               
420-747
               

               
Cow position:
               
chr3:44861239-44861560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
68, 24
               

               
Conread position:
               
421-774
               

               
Cow position:
               
chr3:37452140-37451789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
422-741
               

               
Cow position:
               
chr3:23444817-23445136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
62, 22
               

               
Conread position:
               
422-747
               

               
Cow position:
               
chr3:12287293-12286983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
268, 22
               

               
Conread position:
               
426-644
               

               
Cow position:
               
chr3:18056497-18056294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
427-710
               

               
Cow position:
               
chr3:34556175-34556454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
118, 6
               

               
Conread position:
               
428-713
               

               
Cow position:
               
chr3:78896712-78896430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
429-743
               

               
Cow position:
               
chr3:40345473-40345153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
49, 25
               

               
Conread position:
               
429-746
               

               
Cow position:
               
chr3:31907080-31907397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
59, 14
               

               
Conread position:
               
429-747
               

               
Cow position:
               
chr3:72131234-72131549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
430-725
               

               
Cow position:
               
chr3:76015355-76015069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
49, 14
               

               
Conread position:
               
430-780
               

               
Cow position:
               
chr3:73759454-73759801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 13
               

               
Conread position:
               
431-747
               

               
Cow position:
               
chr3:36174006-36174326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 18
               

               
Conread position:
               
431-773
               

               
Cow position:
               
chr3:20437594-20437924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
432-747
               

               
Cow position:
               
chr3:31771745-31771446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
8, 15
               

               
Conread position:
               
433-747
               

               
Cow position:
               
chr3:42563512-42563200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
65, 11
               

               
Conread position:
               
434-747
               

               
Cow position:
               
chr3:72019175-72018867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
49, 12
               

               
Conread position:
               
435-744
               

               
Cow position:
               
chr3:74878531-74878838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
437-733
               

               
Cow position:
               
chr3:34937900-34937602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
49, 9
               

               
Conread position:
               
439-747
               

               
Cow position:
               
chr3:66609790-66610090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 5
               

               
Conread position:
               
444-747
               

               
Cow position:
               
chr3:54903614-54903316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
189, 32
               

               
Conread position:
               
445-730
               

               
Cow position:
               
chr3:31046903-31047184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
30, 46
               

               
Conread position:
               
449-657
               

               
Cow position:
               
chr3:28478132-28477926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
29, 25
               

               
Conread position:
               
450-774
               

               
Cow position:
               
chr3:83921228-83920918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
73, 93
               

               
Conread position:
               
450-795
               

               
Cow position:
               
chr3:42178197-42177859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
38, 63
               

               
Conread position:
               
451-742
               

               
Cow position:
               
chr3:19708065-19708348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 87
               

               
Conread position:
               
451-743
               

               
Cow position:
               
chr3:22820614-22820321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
463-754
               

               
Cow position:
               
chr3:48269888-48269604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
228, 20
               

               
Conread position:
               
463-756
               

               
Cow position:
               
chr3:75057103-75057379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 83
               

               
Conread position:
               
464-747
               

               
Cow position:
               
chr3:26553692-26553964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
162, 20
               

               
Conread position:
               
464-766
               

               
Cow position:
               
chr3:69849481-69849778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
20, 75
               

               
Conread position:
               
465-803
               

               
Cow position:
               
chr3:80081791-80082126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
76, 19
               

               
Conread position:
               
473-785
               

               
Cow position:
               
chr3:33698745-33698429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
156, 11
               

               
Conread position:
               
475-752
               

               
Cow position:
               
chr3:52650515-52650790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 65
               

               
Conread position:
               
477-744
               

               
Cow position:
               
chr3:79207975-79208252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
59, 126
               

               
Conread position:
               
477-747
               

               
Cow position:
               
chr3:9843598-9843331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
90, 59
               

               
Conread position:
               
479-743
               

               
Cow position:
               
chr3:22171200-22170942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
133, 58
               

               
Conread position:
               
481-747
               

               
Cow position:
               
chr3:84000620-84000360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
153, 55
               

               
Conread position:
               
482-657
               

               
Cow position:
               
chr3:77729462-77729290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
85, 55
               

               
Conread position:
               
482-747
               

               
Cow position:
               
chr3:5416214-5416483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
160, 89
               

               
Conread position:
               
483-636
               

               
Cow position:
               
chr3:80953653-80953505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
483-657
               

               
Cow position:
               
chr3:15992723-15992552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
483-709
               

               
Cow position:
               
chr3:39328405-39328186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
149, 61
               

               
Conread position:
               
483-724
               

               
Cow position:
               
chr3:55106434-55106672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
150, 58
               

               
Conread position:
               
483-743
               

               
Cow position:
               
chr3:55947589-55947327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
43, 50
               

               
Conread position:
               
483-747
               

               
Cow position:
               
chr3:14625385-14625640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
87, 59
               

               
Conread position:
               
483-747
               

               
Cow position:
               
chr3:59515109-59514859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
483-747
               

               
Cow position:
               
chr3:61171503-61171762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
176, 61
               

               
Conread position:
               
484-747
               

               
Cow position:
               
chr3:77467943-77467682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
52, 15
               

               
Conread position:
               
484-748
               

               
Cow position:
               
chr3:83201521-83201781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
206, 53
               

               
Conread position:
               
484-774
               

               
Cow position:
               
chr3:77496835-77496537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
23, 62
               

               
Conread position:
               
486-654
               

               
Cow position:
               
chr3:59035042-59034874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
40, 67
               

               
Conread position:
               
486-693
               

               
Cow position:
               
chr3:70632021-70631820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
10, 90
               

               
Conread position:
               
486-738
               

               
Cow position:
               
chr3:78530539-78530295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
48, 66
               

               
Conread position:
               
486-747
               

               
Cow position:
               
chr3:4457069-4457328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
34, 55
               

               
Conread position:
               
486-747
               

               
Cow position:
               
chr3:67165920-67165660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
70, 10
               

               
Conread position:
               
486-747
               

               
Cow position:
               
chr3:68583002-68583255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
159, 51
               

               
Conread position:
               
486-747
               

               
Cow position:
               
chr3:74699380-74699647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
58, 37
               

               
Conread position:
               
486-753
               

               
Cow position:
               
chr3:17957469-17957209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
147, 59
               

               
Conread position:
               
486-753
               

               
Cow position:
               
chr3:27544331-27544588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
14, 52
               

               
Conread position:
               
486-772
               

               
Cow position:
               
chr3:39661454-39661724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
149, 47
               

               
Conread position:
               
487-728
               

               
Cow position:
               
chr3:15859665-15859903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
200, 54
               

               
Conread position:
               
487-761
               

               
Cow position:
               
chr3:46350675-46350394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
143, 67
               

               
Conread position:
               
489-679
               

               
Cow position:
               
chr3:75687438-75687623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
144, 48
               

               
Conread position:
               
489-747
               

               
Cow position:
               
chr3:48923522-48923765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
195, 48
               

               
Conread position:
               
490-652
               

               
Cow position:
               
chr3:53192428-53192579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
490-667
               

               
Cow position:
               
chr3:15232029-15231858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
492-635
               

               
Cow position:
               
chr3:3062564-3062423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
493-747
               

               
Cow position:
               
chr3:57553853-57554098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
206, 43
               

               
Conread position:
               
493-778
               

               
Cow position:
               
chr3:44622891-44623184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
163, 45
               

               
Conread position:
               
494-743
               

               
Cow position:
               
chr3:61678699-61678443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
55, 113
               

               
Conread position:
               
497-709
               

               
Cow position:
               
chr3:25060071-25059859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
143, 39
               

               
Conread position:
               
497-747
               

               
Cow position:
               
chr3:29807458-29807210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
497-762
               

               
Cow position:
               
chr3:4332356-4332096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
140, 42
               

               
Conread position:
               
497-774
               

               
Cow position:
               
chr3:42483899-42483618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
76, 43
               

               
Conread position:
               
498-737
               

               
Cow position:
               
chr3:51543078-51542843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
139, 39
               

               
Conread position:
               
499-636
               

               
Cow position:
               
chr3:1534627-1534761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
499-657
               

               
Cow position:
               
chr3:27247200-27247351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
499-672
               

               
Cow position:
               
chr3:59271532-59271364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
499-678
               

               
Cow position:
               
chr3:24304926-24305101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
130, 40
               

               
Conread position:
               
499-689
               

               
Cow position:
               
chr3:61024312-61024498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
133, 38
               

               
Conread position:
               
499-747
               

               
Cow position:
               
chr3:41366991-41367236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
499-747
               

               
Cow position:
               
chr3:73590005-73590250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
499-747
               

               
Cow position:
               
chr3:77227314-77227066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
188, 39
               

               
Conread position:
               
499-761
               

               
Cow position:
               
chr3:44534770-44535032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
126, 37
               

               
Conread position:
               
499-764
               

               
Cow position:
               
chr3:43528247-43528506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
49, 37
               

               
Conread position:
               
499-775
               

               
Cow position:
               
chr3:63860900-63861182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
130, 41
               

               
Conread position:
               
499-778
               

               
Cow position:
               
chr3:19789125-19789404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
154, 45
               

               
Conread position:
               
499-785
               

               
Cow position:
               
chr3:3164506-3164788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 24
               

               
Conread position:
               
499-785
               

               
Cow position:
               
chr3:78201257-78200975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
192, 44
               

               
Conread position:
               
499-786
               

               
Cow position:
               
chr3:82657098-82657376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
114, 26
               

               
Conread position:
               
500-754
               

               
Cow position:
               
chr3:30701298-30701063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
202, 44
               

               
Conread position:
               
500-755
               

               
Cow position:
               
chr3:49731651-49731898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
132, 42
               

               
Conread position:
               
502-744
               

               
Cow position:
               
chr3:55445347-55445115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
191, 27
               

               
Conread position:
               
502-754
               

               
Cow position:
               
chr3:7858359-7858093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
503-667
               

               
Cow position:
               
chr3:54557613-54557446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
503-747
               

               
Cow position:
               
chr3:2903308-2903542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
70, 34
               

               
Conread position:
               
503-747
               

               
Cow position:
               
chr3:45313035-45312801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
503-747
               

               
Cow position:
               
chr3:46160858-46161097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
112, 34
               

               
Conread position:
               
504-706
               

               
Cow position:
               
chr3:55062887-55063079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
128, 37
               

               
Conread position:
               
505-684
               

               
Cow position:
               
chr3:27212347-27212173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
505-754
               

               
Cow position:
               
chr3:67161927-67161672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
131, 35
               

               
Conread position:
               
506-747
               

               
Cow position:
               
chr3:4087177-4087418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
123, 39
               

               
Conread position:
               
509-747
               

               
Cow position:
               
chr3:8604039-8604266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
509-755
               

               
Cow position:
               
chr3:35283110-35283358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
75, 30
               

               
Conread position:
               
511-747
               

               
Cow position:
               
chr3:23945079-23944845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
49, 32
               

               
Conread position:
               
511-747
               

               
Cow position:
               
chr3:34315977-34316216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
99, 43
               

               
Conread position:
               
511-747
               

               
Cow position:
               
chr3:42461677-42461448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
101, 15
               

               
Conread position:
               
513-679
               

               
Cow position:
               
chr3:57789608-57789445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
112, 32
               

               
Conread position:
               
516-743
               

               
Cow position:
               
chr3:58951587-58951373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
124, 30
               

               
Conread position:
               
518-753
               

               
Cow position:
               
chr3:16004014-16004244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
520-752
               

               
Cow position:
               
chr3:82360011-82359789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
106, 27
               

               
Conread position:
               
523-747
               

               
Cow position:
               
chr3:31903142-31903362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
11, 80
               

               
Conread position:
               
523-747
               

               
Cow position:
               
chr3:58158500-58158719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
158, 43
               

               
Conread position:
               
523-753
               

               
Cow position:
               
chr3:14725275-14725039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
13, 81
               

               
Conread position:
               
535-754
               

               
Cow position:
               
chr3:38497902-38497692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
536-747
               

               
Cow position:
               
chr3:48371094-48370879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 68
               

               
Conread position:
               
536-754
               

               
Cow position:
               
chr3:27286188-27285966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
99, 25
               

               
Conread position:
               
538-747
               

               
Cow position:
               
chr3:74088213-74088426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 62
               

               
Conread position:
               
539-747
               

               
Cow position:
               
chr3:31419657-31419449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
96, 63
               

               
Conread position:
               
540-747
               

               
Cow position:
               
chr3:22021020-22021225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
8, 64
               

               
Conread position:
               
540-747
               

               
Cow position:
               
chr3:32399298-32399506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
10, 65
               

               
Conread position:
               
540-777
               

               
Cow position:
               
chr3:31501302-31501065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
150, 14
               

               
Conread position:
               
545-747
               

               
Cow position:
               
chr3:25691703-25691497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
78, 54
               

               
Conread position:
               
545-785
               

               
Cow position:
               
chr3:11020071-11019826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
14, 58
               

               
Conread position:
               
548-747
               

               
Cow position:
               
chr3:66116165-66116364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
64, 54
               

               
Conread position:
               
551-733
               

               
Cow position:
               
chr3:4861626-4861451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
552-747
               

               
Cow position:
               
chr3:22872105-22872304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
78, 50
               

               
Conread position:
               
552-747
               

               
Cow position:
               
chr3:79591940-79592141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
83, 50
               

               
Conread position:
               
553-760
               

               
Cow position:
               
chr3:61361347-61361135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
80, 46
               

               
Conread position:
               
555-741
               

               
Cow position:
               
chr3:32596988-32597174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
138, 131
               

               
Conread position:
               
564-774
               

               
Cow position:
               
chr3:58383896-58383688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
202, 31
               

               
Conread position:
               
564-785
               

               
Cow position:
               
chr3:72777178-72776948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
567-732
               

               
Cow position:
               
chr3:29334584-29334751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
33, 25
               

               
Conread position:
               
567-743
               

               
Cow position:
               
chr3:55971153-55970977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
123, 35
               

               
Conread position:
               
567-778
               

               
Cow position:
               
chr3:18855022-18854808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
68, 35
               

               
Conread position:
               
567-778
               

               
Cow position:
               
chr3:56704617-56704822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
199, 35
               

               
Conread position:
               
569-747
               

               
Cow position:
               
chr3:51609746-51609564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
571-754
               

               
Cow position:
               
chr3:34392174-34392356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
119, 31
               

               
Conread position:
               
573-737
               

               
Cow position:
               
chr3:35074604-35074439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
128, 29
               

               
Conread position:
               
573-747
               

               
Cow position:
               
chr3:53904100-53903934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
578-774
               

               
Cow position:
               
chr3:26493305-26493504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 21
               

               
Conread position:
               
578-781
               

               
Cow position:
               
chr3:61467523-61467319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
112, 31
               

               
Conread position:
               
580-748
               

               
Cow position:
               
chr3:26894575-26894408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
103, 20
               

               
Conread position:
               
581-747
               

               
Cow position:
               
chr3:77276494-77276657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
582-744
               

               
Cow position:
               
chr3:65020248-65020085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 20
               
Show alignments to all cow chromosomes.