Cow genome map

Conread name: Ss1.1-Pig4-TMW8058J07.5

Conread position: 289-753
Cow position: chrX:11656348-11655880 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 167

Conread position: 309-542
Cow position: chrX:11762764-11763005 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 54, 7

Conread position: 309-747
Cow position: chrX:13177235-13177667 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 296
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 20, 143

Conread position: 311-531
Cow position: chrX:16323768-16324006 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 180
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 11, 150

Conread position: 313-467
Cow position: chrX:11602243-11602407 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 142

Conread position: 313-534
Cow position: chrX:1122303-1122538 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 44, 144

Conread position: 313-747
Cow position: chrX:31442597-31443024 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 20

Conread position: 313-756
Cow position: chrX:7278154-7277707 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 143

Conread position: 314-747
Cow position: chrX:38964340-38963904 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 127

Conread position: 316-471
Cow position: chrX:27415347-27415506 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 133

Conread position: 316-747
Cow position: chrX:22075035-22074598 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 310
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 16

Conread position: 316-747
Cow position: chrX:24131937-24132353 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 282
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 294, 53

Conread position: 316-752
Cow position: chrX:11938711-11939135 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 290
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 52

Conread position: 317-510
Cow position: chrX:12983-12783 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 137

Conread position: 317-708
Cow position: chrX:23667335-23666959 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 267
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 158, 22

Conread position: 317-754
Cow position: chrX:20339656-20340101 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 23

Conread position: 317-754
Cow position: chrX:41123284-41122862 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 7

Conread position: 318-546
Cow position: chrX:38587604-38587850 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 182
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 12, 139

Conread position: 318-685
Cow position: chrX:21986062-21986432 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 254
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 45, 77

Conread position: 319-716
Cow position: chrX:34792085-34792482 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 280
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 41, 98

Conread position: 319-742
Cow position: chrX:39545772-39546171 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 287
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 10, 51

Conread position: 319-743
Cow position: chrX:13913312-13912882 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 301
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 52, 15

Conread position: 320-470
Cow position: chrX:1571360-1571514 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 38, 14

Conread position: 320-500
Cow position: chrX:39642391-39642576 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 43, 132

Conread position: 320-532
Cow position: chrX:19717748-19717529 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 40, 111

Conread position: 320-533
Cow position: chrX:19018590-19018825 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 9, 141

Conread position: 320-533
Cow position: chrX:35659032-35658806 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 8, 136

Conread position: 320-535
Cow position: chrX:39180001-39180229 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 9, 132

Conread position: 320-542
Cow position: chrX:24054898-24054668 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 85, 48

Conread position: 320-543
Cow position: chrX:42331509-42331274 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 38, 16

Conread position: 320-561
Cow position: chrX:27145836-27145582 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 48, 132

Conread position: 320-568
Cow position: chrX:1087911-1088167 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 43, 132

Conread position: 320-584
Cow position: chrX:25441321-25441570 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 202
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 71

Conread position: 320-589
Cow position: chrX:27306676-27306407 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 43, 65

Conread position: 320-605
Cow position: chrX:39353008-39352720 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 211
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 59, 14

Conread position: 320-607
Cow position: chrX:13122181-13121868 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 41, 136

Conread position: 320-635
Cow position: chrX:42855700-42855365 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 43, 142

Conread position: 320-636
Cow position: chrX:25282777-25283105 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 233
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 173

Conread position: 320-657
Cow position: chrX:24332016-24331666 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 239
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 9, 133

Conread position: 320-679
Cow position: chrX:27287521-27287868 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 242
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 8, 73

Conread position: 320-679
Cow position: chrX:34315764-34315396 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 266
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 43, 148

Conread position: 320-689
Cow position: chrX:20584549-20584178 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 65

Conread position: 320-689
Cow position: chrX:29723988-29723597 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 267
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 120

Conread position: 320-689
Cow position: chrX:34314257-34313889 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 261
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 50, 12

Conread position: 320-722
Cow position: chrX:47186095-47186498 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 271
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 32, 39

Conread position: 320-738
Cow position: chrX:45110888-45110462 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 283
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 37, 134

Conread position: 320-744
Cow position: chrX:12979598-12980030 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 307
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 51, 136

Conread position: 320-744
Cow position: chrX:17630592-17631002 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 39

Conread position: 320-747
Cow position: chrX:9634955-9635383 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 136

Conread position: 320-747
Cow position: chrX:17662385-17662799 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 12

Conread position: 320-747
Cow position: chrX:27431687-27432121 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 131

Conread position: 320-747
Cow position: chrX:35288883-35288458 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 223

Conread position: 320-747
Cow position: chrX:36841077-36840669 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 284
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 161, 43

Conread position: 320-747
Cow position: chrX:39938301-39938725 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 294
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 37, 102

Conread position: 320-754
Cow position: chrX:32310319-32309896 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 293
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 42, 93

Conread position: 320-762
Cow position: chrX:41084133-41083708 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 300
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 168, 48

Conread position: 320-777
Cow position: chrX:42246944-42247417 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 138

Conread position: 320-785
Cow position: chrX:4268832-4269310 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 317
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 9, 115

Conread position: 321-535
Cow position: chrX:17524146-17524380 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 138

Conread position: 321-542
Cow position: chrX:38722333-38722118 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 155, 43

Conread position: 321-636
Cow position: chrX:29050478-29050156 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 235
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 52, 131

Conread position: 321-659
Cow position: chrX:34836836-34837169 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 223
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 121

Conread position: 321-743
Cow position: chrX:34532747-34532330 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 284
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 83, 40

Conread position: 321-744
Cow position: chrX:6544481-6544057 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 94

Conread position: 321-744
Cow position: chrX:10959180-10959600 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 49

Conread position: 321-747
Cow position: chrX:630083-630510 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 288
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 6, 72

Conread position: 321-747
Cow position: chrX:3654839-3654402 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 301
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 40, 65

Conread position: 321-747
Cow position: chrX:22813301-22812858 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 290
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 42, 171

Conread position: 321-747
Cow position: chrX:33854990-33855435 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 299
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 42, 134

Conread position: 321-747
Cow position: chrX:34565521-34565090 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 116

Conread position: 321-747
Cow position: chrX:48237053-48236609 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 305
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 27, 136

Conread position: 321-753
Cow position: chrX:12250052-12249599 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 71

Conread position: 321-754
Cow position: chrX:30543072-30543496 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 46

Conread position: 321-764
Cow position: chrX:15006922-15007370 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 76

Conread position: 321-805
Cow position: chrX:7646474-7645997 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 337
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 14, 77

Conread position: 322-480
Cow position: chrX:42875444-42875277 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 139
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 41, 132

Conread position: 322-533
Cow position: chrX:38302049-38301815 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 37, 140

Conread position: 322-744
Cow position: chrX:35413830-35413433 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 71

Conread position: 322-744
Cow position: chrX:36976184-36975750 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 300
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 12, 116

Conread position: 322-747
Cow position: chrX:4825611-4826030 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 83

Conread position: 322-755
Cow position: chrX:35224512-35224091 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 302
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 12, 94

Conread position: 323-535
Cow position: chrX:11654001-11653768 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 131

Conread position: 323-553
Cow position: chrX:27074817-27075065 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 185
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 40, 134

Conread position: 323-614
Cow position: chrX:12437049-12437340 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 196
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 123

Conread position: 323-652
Cow position: chrX:45875625-45875284 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 234
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 116

Conread position: 323-677
Cow position: chrX:40685095-40685463 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 133

Conread position: 323-747
Cow position: chrX:29121255-29120854 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 44

Conread position: 323-750
Cow position: chrX:38218947-38218501 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 234

Conread position: 324-471
Cow position: chrX:231793-231944 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 38, 125

Conread position: 324-473
Cow position: chrX:3494817-3494973 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 39, 130

Conread position: 324-478
Cow position: chrX:5097561-5097732 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 29

Conread position: 324-507
Cow position: chrX:46910042-46909847 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 10, 120

Conread position: 324-512
Cow position: chrX:41166596-41166790 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 100

Conread position: 324-542
Cow position: chrX:3806911-3806678 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 39, 129

Conread position: 324-544
Cow position: chrX:24170491-24170735 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 183
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 10, 129

Conread position: 324-632
Cow position: chrX:36009703-36010003 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 216
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 158, 35

Conread position: 324-639
Cow position: chrX:33654609-33654935 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 233
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 135

Conread position: 324-689
Cow position: chrX:39415157-39415510 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 255
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 157, 41

Conread position: 324-705
Cow position: chrX:11614908-11614539 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 34

Conread position: 324-717
Cow position: chrX:6407780-6407376 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 293
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 14, 137

Conread position: 324-723
Cow position: chrX:16514048-16514443 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 267
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 32, 17

Conread position: 324-742
Cow position: chrX:33001132-33000706 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 82

Conread position: 324-743
Cow position: chrX:30133090-30133522 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 301
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 11, 111

Conread position: 324-744
Cow position: chrX:6414265-6413847 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 277
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 66, 124

Conread position: 324-744
Cow position: chrX:15146966-15147386 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 131

Conread position: 324-744
Cow position: chrX:22624693-22624282 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 41

Conread position: 324-744
Cow position: chrX:27175234-27174796 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 119

Conread position: 324-747
Cow position: chrX:14973524-14973937 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 72

Conread position: 324-747
Cow position: chrX:23497464-23497867 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 106

Conread position: 324-747
Cow position: chrX:27705821-27705387 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 116

Conread position: 324-747
Cow position: chrX:37780879-37781320 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 130

Conread position: 324-747
Cow position: chrX:41878703-41879137 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 49

Conread position: 324-753
Cow position: chrX:40567838-40567391 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 310
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 51, 61

Conread position: 324-754
Cow position: chrX:11747043-11746632 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 292
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 91, 43

Conread position: 324-754
Cow position: chrX:12290952-12290526 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 308
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 10, 138

Conread position: 324-764
Cow position: chrX:24365589-24366051 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 312
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 46, 117

Conread position: 324-774
Cow position: chrX:10865637-10866097 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 303
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 35, 133

Conread position: 324-774
Cow position: chrX:17231971-17231504 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 320
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 10, 119

Conread position: 324-774
Cow position: chrX:30962641-30963102 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 319
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 10, 121

Conread position: 324-774
Cow position: chrX:34441219-34441680 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 118

Conread position: 324-774
Cow position: chrX:38094293-38094755 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 127

Conread position: 324-778
Cow position: chrX:7351534-7351064 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 137

Conread position: 324-778
Cow position: chrX:24259379-24259817 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 308
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 133, 33

Conread position: 324-778
Cow position: chrX:25815665-25816131 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 319
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 10, 121

Conread position: 324-785
Cow position: chrX:27446916-27446446 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 324
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 39, 134

Conread position: 324-803
Cow position: chrX:15546115-15545638 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 330
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 11, 116

Conread position: 325-494
Cow position: chrX:23136963-23136792 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 122

Conread position: 325-575
Cow position: chrX:17956921-17956664 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 36, 131

Conread position: 325-582
Cow position: chrX:22284915-22284671 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 194
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 31, 125

Conread position: 325-582
Cow position: chrX:42894154-42893879 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 37, 128

Conread position: 325-682
Cow position: chrX:5919719-5919360 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 246
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 37, 123

Conread position: 325-744
Cow position: chrX:10302549-10302139 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 279
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 157, 44

Conread position: 325-747
Cow position: chrX:7425677-7425263 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 277
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 156, 40

Conread position: 325-747
Cow position: chrX:29541996-29542421 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 287
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 46, 134

Conread position: 325-754
Cow position: chrX:1503539-1503129 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 42

Conread position: 325-754
Cow position: chrX:5637947-5638379 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 70

Conread position: 325-756
Cow position: chrX:7513741-7513301 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 290
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 44, 91

Conread position: 326-474
Cow position: chrX:4390334-4390470 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 326-479
Cow position: chrX:27270600-27270441 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 107

Conread position: 326-480
Cow position: chrX:40556231-40556394 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 128

Conread position: 326-541
Cow position: chrX:32910328-32910102 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 32, 129

Conread position: 326-600
Cow position: chrX:4109416-4109134 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 32, 132

Conread position: 326-608
Cow position: chrX:296623-296332 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 208
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 44, 115

Conread position: 326-624
Cow position: chrX:36866404-36866092 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 223
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 37, 128

Conread position: 326-632
Cow position: chrX:6559225-6559532 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 208
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 44, 88

Conread position: 326-637
Cow position: chrX:1466394-1466069 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 220
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 132

Conread position: 326-637
Cow position: chrX:40337142-40336807 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 234
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 37, 132

Conread position: 326-657
Cow position: chrX:26881331-26881680 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 45, 134

Conread position: 326-703
Cow position: chrX:36356335-36355957 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 130

Conread position: 326-744
Cow position: chrX:30420736-30421139 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 41

Conread position: 326-744
Cow position: chrX:45598377-45598803 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 288
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 34, 130

Conread position: 326-747
Cow position: chrX:8925911-8925503 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 48

Conread position: 326-747
Cow position: chrX:20791609-20792020 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 274
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 33, 65

Conread position: 326-747
Cow position: chrX:41674329-41673901 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 292
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 9, 125

Conread position: 326-752
Cow position: chrX:1499885-1499462 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 82

Conread position: 326-774
Cow position: chrX:6563728-6563282 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 310
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 155, 49

Conread position: 326-774
Cow position: chrX:18456611-18456162 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 307
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 68, 39

Conread position: 326-778
Cow position: chrX:42994827-42994379 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 313
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 34, 105

Conread position: 327-479
Cow position: chrX:24277533-24277385 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 327-525
Cow position: chrX:23089065-23088870 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 146, 33

Conread position: 327-540
Cow position: chrX:4559964-4559738 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 131

Conread position: 327-543
Cow position: chrX:10251972-10252202 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 36, 128

Conread position: 327-545
Cow position: chrX:27668732-27668963 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 126

Conread position: 327-552
Cow position: chrX:28923242-28923030 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 181, 34

Conread position: 327-689
Cow position: chrX:35822561-35822198 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 234
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 106

Conread position: 327-734
Cow position: chrX:11633913-11633489 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 130

Conread position: 327-746
Cow position: chrX:14883727-14884163 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 298
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 36, 160

Conread position: 327-747
Cow position: chrX:152135-151699 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 121

Conread position: 327-747
Cow position: chrX:9251933-9252380 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 130

Conread position: 327-747
Cow position: chrX:16762998-16762570 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 224

Conread position: 327-747
Cow position: chrX:29601598-29602037 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 130

Conread position: 327-747
Cow position: chrX:46072600-46073023 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 69

Conread position: 327-754
Cow position: chrX:42492291-42492724 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 115

Conread position: 327-760
Cow position: chrX:41238132-41238582 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 123

Conread position: 327-774
Cow position: chrX:5017186-5017638 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 164

Conread position: 327-778
Cow position: chrX:21664515-21664957 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 314
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 34, 63

Conread position: 327-778
Cow position: chrX:31250620-31250155 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 310
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 43, 132

Conread position: 328-473
Cow position: chrX:32747949-32747804 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 16

Conread position: 328-531
Cow position: chrX:35285404-35285181 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 6, 133

Conread position: 328-561
Cow position: chrX:42449783-42450033 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 6, 131

Conread position: 328-596
Cow position: chrX:18964605-18964876 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 29

Conread position: 328-636
Cow position: chrX:12095542-12095864 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 233
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 35, 113

Conread position: 328-636
Cow position: chrX:27261419-27261097 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 236
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 32, 127

Conread position: 328-647
Cow position: chrX:31515396-31515067 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 242
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 21, 12

Conread position: 328-679
Cow position: chrX:19879245-19878916 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 235
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 153, 36

Conread position: 328-682
Cow position: chrX:41027390-41027020 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 131

Conread position: 328-716
Cow position: chrX:4399347-4398954 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 128

Conread position: 328-716
Cow position: chrX:37956074-37955666 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 280
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 32, 127

Conread position: 328-747
Cow position: chrX:6674706-6675127 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 283
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 29, 71

Conread position: 328-747
Cow position: chrX:28846664-28847081 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 296
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 35, 12

Conread position: 328-747
Cow position: chrX:38549676-38549246 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 129

Conread position: 328-747
Cow position: chrX:46588050-46587615 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 60

Conread position: 328-753
Cow position: chrX:3580174-3579734 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 306
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 43, 113

Conread position: 328-753
Cow position: chrX:25570776-25571203 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 290
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 29, 8

Conread position: 328-753
Cow position: chrX:36283569-36283137 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 283
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 169

Conread position: 328-778
Cow position: chrX:4632625-4633086 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 327
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 30, 229

Conread position: 328-778
Cow position: chrX:40789412-40788970 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 310
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 155, 37

Conread position: 328-792
Cow position: chrX:7722203-7721737 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 87

Conread position: 328-806
Cow position: chrX:17542170-17541702 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 59

Conread position: 329-543
Cow position: chrX:23335747-23335976 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 124

Conread position: 329-605
Cow position: chrX:27511644-27511367 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 211
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 32, 116

Conread position: 329-633
Cow position: chrX:40680843-40680523 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 233
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 29, 129

Conread position: 329-634
Cow position: chrX:21328142-21327817 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 230
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 28, 129

Conread position: 329-730
Cow position: chrX:161628-161236 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 68

Conread position: 329-743
Cow position: chrX:29544657-29545078 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 280
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 7, 103

Conread position: 329-747
Cow position: chrX:9201771-9201344 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 123

Conread position: 329-747
Cow position: chrX:42380884-42381302 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 303
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 39, 31

Conread position: 329-775
Cow position: chrX:2301151-2300702 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 319
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 27, 59

Conread position: 329-778
Cow position: chrX:17964317-17964757 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 296
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 5, 61

Conread position: 329-785
Cow position: chrX:21593520-21593041 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 179

Conread position: 329-806
Cow position: chrX:34753954-34754454 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 327
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 49, 30

Conread position: 330-636
Cow position: chrX:20168782-20168467 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 33, 111

Conread position: 332-633
Cow position: chrX:20881736-20882025 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 220
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 31, 80

Conread position: 332-730
Cow position: chrX:35382817-35383205 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 274
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 31, 120

Conread position: 332-747
Cow position: chrX:1175765-1176185 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 289
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 89

Conread position: 332-747
Cow position: chrX:38642467-38642055 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 288
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 42, 118

Conread position: 332-754
Cow position: chrX:19930848-19930446 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 278
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 117, 35

Conread position: 332-754
Cow position: chrX:42011486-42011070 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 303
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 78, 35

Conread position: 332-778
Cow position: chrX:17795204-17794750 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 303
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 37, 16

Conread position: 332-778
Cow position: chrX:31260400-31260865 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 63

Conread position: 333-542
Cow position: chrX:29478946-29478721 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 30, 123

Conread position: 333-647
Cow position: chrX:10516478-10516154 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 231
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 30, 125

Conread position: 333-689
Cow position: chrX:8917619-8917252 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 245
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 110

Conread position: 333-716
Cow position: chrX:25388048-25388409 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 259
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 148, 59

Conread position: 333-743
Cow position: chrX:46532266-46532708 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 131

Conread position: 333-750
Cow position: chrX:41526310-41526729 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 290
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 37, 119

Conread position: 333-754
Cow position: chrX:15329846-15329443 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 286
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 68, 34

Conread position: 334-754
Cow position: chrX:20887426-20887854 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 115

Conread position: 334-795
Cow position: chrX:31489744-31489261 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 124

Conread position: 335-788
Cow position: chrX:25035159-25035632 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 325
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 24, 123

Conread position: 336-743
Cow position: chrX:31436690-31436284 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 116

Conread position: 337-746
Cow position: chrX:6488785-6488385 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 106

Conread position: 338-589
Cow position: chrX:4645695-4645957 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 185
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 111

Conread position: 338-774
Cow position: chrX:20152067-20151620 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 58

Conread position: 340-572
Cow position: chrX:42836398-42836149 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 175
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 18, 99

Conread position: 340-743
Cow position: chrX:6234268-6234647 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 282
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 23, 51

Conread position: 340-747
Cow position: chrX:28013223-28013642 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 276
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 102

Conread position: 340-754
Cow position: chrX:34544003-34543578 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 298
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 23, 121

Conread position: 343-720
Cow position: chrX:4278905-4279290 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 266
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 96

Conread position: 343-735
Cow position: chrX:31252613-31252227 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 15

Conread position: 344-747
Cow position: chrX:1615845-1616250 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 45

Conread position: 347-774
Cow position: chrX:35543094-35542661 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 109

Conread position: 348-724
Cow position: chrX:7337047-7336647 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 252
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 13, 106

Conread position: 348-755
Cow position: chrX:42171103-42171510 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 281
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 127, 17

Conread position: 356-572
Cow position: chrX:32318496-32318275 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 34, 75

Conread position: 356-606
Cow position: chrX:20677951-20678216 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 186
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 5, 93

Conread position: 357-580
Cow position: chrX:23188595-23188813 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 175
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 46, 89

Conread position: 357-718
Cow position: chrX:35885538-35885903 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 259
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 36, 72

Conread position: 360-479
Cow position: chrX:40543337-40543455 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 70

Conread position: 360-540
Cow position: chrX:14985971-14986153 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 60, 19

Conread position: 360-620
Cow position: chrX:126947-126694 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 194
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 124, 30

Conread position: 360-676
Cow position: chrX:31294378-31294688 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 236
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 43, 96

Conread position: 360-743
Cow position: chrX:32420402-32420020 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 272
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 30, 85

Conread position: 360-754
Cow position: chrX:13868895-13868484 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 275
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 93

Conread position: 360-778
Cow position: chrX:37119766-37119364 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 30

Conread position: 360-785
Cow position: chrX:8900210-8899782 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 285
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 101, 54

Conread position: 361-627
Cow position: chrX:4515878-4515603 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 29, 88

Conread position: 361-674
Cow position: chrX:34222903-34222584 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 225
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 29, 89

Conread position: 361-708
Cow position: chrX:41068910-41068564 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 85

Conread position: 361-755
Cow position: chrX:34238913-34238510 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 278
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 33, 199

Conread position: 361-785
Cow position: chrX:11844050-11844483 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 288
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 76

Conread position: 367-679
Cow position: chrX:11084889-11085191 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 109, 8

Conread position: 371-731
Cow position: chrX:28878002-28878345 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 258
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 113, 19

Conread position: 371-754
Cow position: chrX:30163176-30162787 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 264
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 11, 28

Conread position: 371-806
Cow position: chrX:8731266-8730817 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 56

Conread position: 375-575
Cow position: chrX:22628163-22628365 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 30

Conread position: 378-657
Cow position: chrX:5679765-5680047 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 201
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 158, 65

Conread position: 378-691
Cow position: chrX:5118333-5118648 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 229
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 97, 34

Conread position: 378-747
Cow position: chrX:13647619-13647986 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 251
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 110, 65

Conread position: 378-753
Cow position: chrX:40035274-40035653 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 66

Conread position: 378-789
Cow position: chrX:12309220-12309635 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 285
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 106, 66

Conread position: 379-563
Cow position: chrX:32574482-32574293 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 38, 48

Conread position: 379-657
Cow position: chrX:6259985-6260270 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 211
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 106, 30

Conread position: 381-656
Cow position: chrX:43568085-43567811 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 193
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 27, 66

Conread position: 383-747
Cow position: chrX:6265436-6265788 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 252
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 18, 62

Conread position: 383-747
Cow position: chrX:20801932-20801577 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 253
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 13, 65

Conread position: 383-785
Cow position: chrX:45414142-45414542 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 258
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 31

Conread position: 385-677
Cow position: chrX:42873544-42873260 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 217
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 66, 58

Conread position: 386-676
Cow position: chrX:19273549-19273854 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 201
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 89, 58

Conread position: 388-755
Cow position: chrX:28134498-28134135 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 269
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 20, 60

Conread position: 389-600
Cow position: chrX:31626822-31627037 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 16, 58

Conread position: 389-614
Cow position: chrX:25037142-25036918 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 93, 55

Conread position: 389-663
Cow position: chrX:23562787-23562517 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 204
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 86, 57

Conread position: 389-664
Cow position: chrX:29194385-29194115 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 192
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 58

Conread position: 389-743
Cow position: chrX:32623725-32623384 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 241
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 41

Conread position: 389-743
Cow position: chrX:33640130-33639773 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 55

Conread position: 389-743
Cow position: chrX:41884257-41884616 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 247
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 87, 57

Conread position: 389-744
Cow position: chrX:8797404-8797048 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 55

Conread position: 389-752
Cow position: chrX:27771813-27772167 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 237
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 81, 55

Conread position: 389-753
Cow position: chrX:5872472-5872105 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 263
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 92, 55

Conread position: 389-756
Cow position: chrX:16416653-16416297 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 20

Conread position: 389-774
Cow position: chrX:21672714-21672321 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 260
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 101, 37

Conread position: 389-778
Cow position: chrX:45113777-45113393 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 267
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 16, 159

Conread position: 390-517
Cow position: chrX:40355185-40355057 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 54

Conread position: 390-529
Cow position: chrX:27667579-27667443 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 119, 54

Conread position: 390-542
Cow position: chrX:42506079-42506230 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 390-559
Cow position: chrX:18046550-18046381 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 98, 54

Conread position: 390-565
Cow position: chrX:25412059-25411886 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 94, 37

Conread position: 390-635
Cow position: chrX:16348417-16348658 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 33

Conread position: 390-651
Cow position: chrX:169392-169646 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 90, 54

Conread position: 390-654
Cow position: chrX:41270832-41271099 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 198
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 91, 53

Conread position: 390-679
Cow position: chrX:7710384-7710677 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 203
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 5, 57

Conread position: 390-685
Cow position: chrX:9365522-9365814 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 215
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 94, 56

Conread position: 390-691
Cow position: chrX:616104-616408 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 213
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 20, 55

Conread position: 390-733
Cow position: chrX:13382479-13382137 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 55

Conread position: 390-734
Cow position: chrX:43730070-43730404 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 54

Conread position: 390-743
Cow position: chrX:20697455-20697806 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 248
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 79, 54

Conread position: 390-743
Cow position: chrX:34554877-34554530 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 243
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 100, 54

Conread position: 390-744
Cow position: chrX:17726130-17725775 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 244
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 27, 54

Conread position: 390-747
Cow position: chrX:618854-619210 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 55

Conread position: 390-747
Cow position: chrX:7718986-7718652 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 305, 32

Conread position: 390-747
Cow position: chrX:17888269-17888608 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 54

Conread position: 390-747
Cow position: chrX:23092027-23091679 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 260
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 25, 56

Conread position: 390-747
Cow position: chrX:23513866-23514220 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 40

Conread position: 390-747
Cow position: chrX:34503076-34502716 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 58

Conread position: 390-753
Cow position: chrX:27393872-27394222 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 54

Conread position: 390-785
Cow position: chrX:11717629-11718022 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 56

Conread position: 390-785
Cow position: chrX:38006616-38007010 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 37

Conread position: 391-576
Cow position: chrX:23498527-23498710 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 88, 53

Conread position: 391-636
Cow position: chrX:29549399-29549638 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 187
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 88, 18

Conread position: 391-657
Cow position: chrX:38654288-38654542 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 0

Conread position: 391-734
Cow position: chrX:31312182-31311836 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 53

Conread position: 391-744
Cow position: chrX:4043714-4044050 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 53

Conread position: 391-747
Cow position: chrX:28865852-28866195 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 249
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 14, 57

Conread position: 391-795
Cow position: chrX:40557523-40557927 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 277
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 13, 58

Conread position: 392-599
Cow position: chrX:44339173-44339379 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 28, 35

Conread position: 392-601
Cow position: chrX:32977934-32978134 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 92, 30

Conread position: 392-639
Cow position: chrX:37129421-37129175 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 91, 52

Conread position: 392-672
Cow position: chrX:38728886-38728610 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 204
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 89, 52

Conread position: 392-716
Cow position: chrX:32821180-32820857 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 52

Conread position: 392-718
Cow position: chrX:22387098-22387421 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 52

Conread position: 392-747
Cow position: chrX:10831336-10831699 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 47

Conread position: 392-747
Cow position: chrX:14599684-14599327 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 34

Conread position: 392-747
Cow position: chrX:24424249-24424590 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 237
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 303, 52

Conread position: 392-762
Cow position: chrX:6690108-6690465 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 262
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 91, 52

Conread position: 393-600
Cow position: chrX:22914891-22915092 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 91, 51

Conread position: 393-657
Cow position: chrX:5679421-5679678 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 88, 50

Conread position: 394-539
Cow position: chrX:1337142-1337279 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 394-600
Cow position: chrX:40108368-40108572 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 90, 55

Conread position: 394-727
Cow position: chrX:46433642-46433298 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 240
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 7, 51

Conread position: 394-743
Cow position: chrX:34402156-34401799 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 143

Conread position: 394-744
Cow position: chrX:9416534-9416892 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 245
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 23, 33

Conread position: 395-702
Cow position: chrX:27228276-27227966 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 226
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 25, 50

Conread position: 395-733
Cow position: chrX:42235376-42235722 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 14

Conread position: 396-747
Cow position: chrX:5900610-5900254 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 253
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 94, 48

Conread position: 397-608
Cow position: chrX:6463745-6463548 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 397-747
Cow position: chrX:37910591-37910250 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 19

Conread position: 397-747
Cow position: chrX:43527655-43527301 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 249
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 87, 47

Conread position: 399-595
Cow position: chrX:19943091-19943288 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 149
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 71, 45

Conread position: 399-747
Cow position: chrX:2786412-2786750 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 230
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 45

Conread position: 399-747
Cow position: chrX:7695893-7695557 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 251
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 75, 23

Conread position: 399-774
Cow position: chrX:6278353-6278736 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 28

Conread position: 401-743
Cow position: chrX:36778541-36778209 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 228
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 228, 38

Conread position: 402-748
Cow position: chrX:11073049-11073392 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 44

Conread position: 402-816
Cow position: chrX:678432-678842 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 275
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 50, 42

Conread position: 403-583
Cow position: chrX:35759795-35759978 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 80, 46

Conread position: 403-605
Cow position: chrX:2003735-2003937 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 70, 42

Conread position: 403-737
Cow position: chrX:39126467-39126144 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 236
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 80, 47

Conread position: 403-742
Cow position: chrX:25338328-25337982 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 243
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 45, 86

Conread position: 403-747
Cow position: chrX:17042823-17042488 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 230
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 81, 41

Conread position: 403-748
Cow position: chrX:29761543-29761887 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 226
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 40

Conread position: 403-798
Cow position: chrX:31340851-31340450 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 279
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 45, 56

Conread position: 404-571
Cow position: chrX:20743744-20743575 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 80, 40

Conread position: 404-583
Cow position: chrX:29553425-29553246 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 80, 42

Conread position: 404-744
Cow position: chrX:7497379-7497044 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 224
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 72, 141

Conread position: 404-754
Cow position: chrX:1978648-1978300 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 224
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 40

Conread position: 404-754
Cow position: chrX:25419013-25419371 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 240
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 10, 23

Conread position: 404-778
Cow position: chrX:32743673-32743303 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 258
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 77, 40

Conread position: 404-806
Cow position: chrX:29289718-29289314 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 288
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 14, 23

Conread position: 405-632
Cow position: chrX:36514753-36514981 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 182
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 74, 38

Conread position: 405-722
Cow position: chrX:29680122-29680438 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 229
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 78, 39

Conread position: 407-752
Cow position: chrX:10411847-10412197 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 41

Conread position: 408-744
Cow position: chrX:917232-917571 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 36

Conread position: 408-754
Cow position: chrX:11082486-11082823 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 38

Conread position: 412-733
Cow position: chrX:7162188-7161883 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 226
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 72, 32

Conread position: 412-737
Cow position: chrX:47481928-47481607 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 218
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 76, 32

Conread position: 412-747
Cow position: chrX:37232539-37232207 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 237
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 76, 32

Conread position: 413-743
Cow position: chrX:42469810-42470135 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 236
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 62, 31

Conread position: 413-747
Cow position: chrX:1514288-1514603 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 31

Conread position: 413-747
Cow position: chrX:35273495-35273149 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 229
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 30

Conread position: 414-746
Cow position: chrX:11454919-11455255 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 30

Conread position: 414-774
Cow position: chrX:18694801-18695151 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 30

Conread position: 416-639
Cow position: chrX:19162214-19162434 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 99, 7

Conread position: 416-747
Cow position: chrX:39558221-39558549 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 27

Conread position: 416-774
Cow position: chrX:15815209-15814867 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 248
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 65, 13

Conread position: 420-747
Cow position: chrX:28111633-28111304 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 236
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 60, 24

Conread position: 420-761
Cow position: chrX:13322866-13323212 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 232
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 37, 67

Conread position: 420-796
Cow position: chrX:9161699-9161336 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 246
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 61, 24

Conread position: 426-747
Cow position: chrX:29032528-29032212 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 225
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 59, 18

Conread position: 428-747
Cow position: chrX:11856546-11856227 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 8

Conread position: 428-754
Cow position: chrX:48194919-48195250 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 219
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 11

Conread position: 428-764
Cow position: chrX:46722618-46722960 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 231
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 63, 11

Conread position: 429-744
Cow position: chrX:38936815-38936501 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 227
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 54, 17

Conread position: 429-747
Cow position: chrX:8917957-8917651 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 215
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 52, 15

Conread position: 430-711
Cow position: chrX:41991934-41992208 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 5, 26

Conread position: 430-775
Cow position: chrX:26625557-26625908 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 14

Conread position: 431-685
Cow position: chrX:21566520-21566262 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 196
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 52, 17

Conread position: 431-746
Cow position: chrX:7509252-7508938 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 207
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 39, 13

Conread position: 431-753
Cow position: chrX:3154130-3154455 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 217
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 13

Conread position: 432-754
Cow position: chrX:41560154-41560448 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 222
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 261, 12

Conread position: 433-788
Cow position: chrX:20377081-20376722 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 237
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 11

Conread position: 439-748
Cow position: chrX:27680503-27680198 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 229
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 49, 9

Conread position: 444-785
Cow position: chrX:31948834-31949173 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 234
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 40, 101

Conread position: 447-672
Cow position: chrX:16055307-16055084 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 105

Conread position: 447-742
Cow position: chrX:29875979-29876264 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 37, 63

Conread position: 448-788
Cow position: chrX:26440688-26441025 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 241
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 35, 91

Conread position: 449-688
Cow position: chrX:27685345-27685108 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 185
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 15, 99

Conread position: 449-747
Cow position: chrX:40480776-40481074 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 214
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 35, 90

Conread position: 452-733
Cow position: chrX:40809786-40809498 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 193
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 32, 116

Conread position: 452-742
Cow position: chrX:1055288-1055587 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 203
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 93

Conread position: 452-774
Cow position: chrX:2467977-2467649 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 229
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 32, 87

Conread position: 453-754
Cow position: chrX:32170797-32171091 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 31, 82

Conread position: 454-778
Cow position: chrX:157686-158010 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 219
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 30, 81

Conread position: 455-754
Cow position: chrX:40648071-40647768 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 220
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 41, 14

Conread position: 457-746
Cow position: chrX:12405293-12405578 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 214
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 27, 88

Conread position: 460-747
Cow position: chrX:13265542-13265822 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 58

Conread position: 464-671
Cow position: chrX:19003374-19003174 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 75

Conread position: 465-747
Cow position: chrX:42461669-42461948 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 23, 73

Conread position: 472-747
Cow position: chrX:19188997-19188734 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 206
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 160, 12

Conread position: 475-785
Cow position: chrX:12018355-12018033 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 228
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 160, 9

Conread position: 477-747
Cow position: chrX:20710135-20709869 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 9

Conread position: 482-754
Cow position: chrX:23970436-23970179 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 194
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 58, 0

Conread position: 483-636
Cow position: chrX:1572083-1572228 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 483-669
Cow position: chrX:20790969-20790795 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 172, 15

Conread position: 483-742
Cow position: chrX:8070643-8070899 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 178
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 154, 54

Conread position: 483-747
Cow position: chrX:11589532-11589791 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 192
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 150, 60

Conread position: 483-747
Cow position: chrX:44192391-44192645 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 175
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 122, 61

Conread position: 483-753
Cow position: chrX:9855354-9855092 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 150, 56

Conread position: 483-754
Cow position: chrX:1810104-1810371 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 123, 57

Conread position: 483-762
Cow position: chrX:9954195-9953924 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 203
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 150, 56

Conread position: 483-774
Cow position: chrX:42507592-42507877 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 198
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 131, 53

Conread position: 483-778
Cow position: chrX:41166906-41167199 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 211
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 157, 54

Conread position: 484-743
Cow position: chrX:11675121-11674867 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 209, 70

Conread position: 484-744
Cow position: chrX:48243411-48243651 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 486-614
Cow position: chrX:17301253-17301378 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 41, 55

Conread position: 486-655
Cow position: chrX:27449944-27450109 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 125, 51

Conread position: 486-672
Cow position: chrX:26493580-26493764 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 125, 58

Conread position: 486-718
Cow position: chrX:22466008-22465782 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 23, 120

Conread position: 486-719
Cow position: chrX:46146508-46146735 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 65, 72

Conread position: 486-741
Cow position: chrX:43409062-43408801 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 114, 66

Conread position: 486-743
Cow position: chrX:43973598-43973360 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 176
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 486-744
Cow position: chrX:28845886-28845646 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 78, 51

Conread position: 486-747
Cow position: chrX:842210-841956 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 125, 39

Conread position: 486-747
Cow position: chrX:25232646-25232388 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 126, 43

Conread position: 486-754
Cow position: chrX:34662793-34663053 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 183
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 149, 53

Conread position: 486-758
Cow position: chrX:36961694-36961423 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 208
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 142, 51

Conread position: 486-785
Cow position: chrX:23583614-23583316 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 74, 56

Conread position: 486-793
Cow position: chrX:2186309-2186013 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 213
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 10, 67

Conread position: 487-775
Cow position: chrX:34991088-34990810 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 195
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 279, 58

Conread position: 487-806
Cow position: chrX:42875035-42874716 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 235
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 143, 50

Conread position: 488-747
Cow position: chrX:35681393-35681144 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 201
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 142, 57

Conread position: 488-754
Cow position: chrX:2383542-2383279 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 7

Conread position: 489-726
Cow position: chrX:13785310-13785539 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 56, 0

Conread position: 489-742
Cow position: chrX:34270452-34270209 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 146, 48

Conread position: 489-747
Cow position: chrX:15139497-15139746 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 190
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 51, 0

Conread position: 489-747
Cow position: chrX:19015487-19015240 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 185
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 207, 55

Conread position: 489-747
Cow position: chrX:26875831-26876084 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 55, 0

Conread position: 489-753
Cow position: chrX:47191357-47191607 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 62, 46

Conread position: 490-778
Cow position: chrX:32127942-32128219 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 209
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 9, 48

Conread position: 493-754
Cow position: chrX:14900683-14900931 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 5, 45

Conread position: 494-785
Cow position: chrX:28157543-28157243 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 214
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 121, 17

Conread position: 494-806
Cow position: chrX:17498130-17497834 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 216
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 272, 46

Conread position: 495-742
Cow position: chrX:21816311-21816060 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 85, 51

Conread position: 496-774
Cow position: chrX:47756885-47757159 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 142, 41

Conread position: 497-652
Cow position: chrX:35848606-35848454 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 143, 24

Conread position: 497-747
Cow position: chrX:28835860-28836103 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 195
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 194, 40

Conread position: 497-747
Cow position: chrX:36249819-36250064 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 140, 55

Conread position: 498-747
Cow position: chrX:26940463-26940694 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 498-762
Cow position: chrX:36198011-36197750 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 174
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 139, 39

Conread position: 499-720
Cow position: chrX:29563329-29563546 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 34, 90

Conread position: 499-743
Cow position: chrX:12116087-12115841 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 142, 40

Conread position: 499-753
Cow position: chrX:38840924-38840680 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 134, 14

Conread position: 499-754
Cow position: chrX:25238219-25237967 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 188
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 43, 72

Conread position: 499-754
Cow position: chrX:29509398-29509653 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 19, 34

Conread position: 499-785
Cow position: chrX:14925040-14924758 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 203
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 138, 17

Conread position: 500-747
Cow position: chrX:41199145-41198902 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 136, 39

Conread position: 501-747
Cow position: chrX:26286019-26285777 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 185
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 138, 33

Conread position: 501-764
Cow position: chrX:44053298-44053039 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 192, 50

Conread position: 502-737
Cow position: chrX:38439518-38439282 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 181
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 188, 35

Conread position: 503-657
Cow position: chrX:35969050-35969199 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 34

Conread position: 503-710
Cow position: chrX:14003610-14003810 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 23, 18

Conread position: 503-754
Cow position: chrX:9997298-9997543 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 52, 0

Conread position: 503-754
Cow position: chrX:41743950-41743703 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 189
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 137, 36

Conread position: 504-746
Cow position: chrX:30832817-30833047 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 186, 33

Conread position: 504-747
Cow position: chrX:17908253-17908486 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 176, 33

Conread position: 505-760
Cow position: chrX:10096066-10095807 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 132, 39

Conread position: 506-762
Cow position: chrX:17271248-17271506 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 175
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 58, 45

Conread position: 506-776
Cow position: chrX:37048548-37048813 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 191, 26

Conread position: 509-778
Cow position: chrX:40116447-40116190 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 31, 0

Conread position: 511-781
Cow position: chrX:20752282-20752025 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 119, 26

Conread position: 512-774
Cow position: chrX:2648323-2648580 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 254, 48

Conread position: 513-635
Cow position: chrX:22376680-22376563 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 514-744
Cow position: chrX:8681899-8682129 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 97, 15

Conread position: 517-755
Cow position: chrX:488517-488279 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 95, 27

Conread position: 526-747
Cow position: chrX:35284638-35284421 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 114, 73

Conread position: 529-731
Cow position: chrX:31256877-31256681 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 164, 11

Conread position: 531-747
Cow position: chrX:35610000-35609784 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 102, 23

Conread position: 536-747
Cow position: chrX:42338940-42339138 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 156
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 538-809
Cow position: chrX:32020113-32020387 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 97, 64

Conread position: 539-777
Cow position: chrX:8991891-8991656 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 161
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 12, 64

Conread position: 539-808
Cow position: chrX:40183338-40183614 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 182
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 96, 63

Conread position: 540-774
Cow position: chrX:10373322-10373077 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 68

Conread position: 544-743
Cow position: chrX:40452211-40452411 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 143, 16

Conread position: 545-756
Cow position: chrX:1728429-1728632 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 201, 50

Conread position: 546-747
Cow position: chrX:46315379-46315583 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 145, 56

Conread position: 546-764
Cow position: chrX:21665596-21665812 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 86, 26

Conread position: 548-747
Cow position: chrX:160036-160238 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 132, 0

Conread position: 549-747
Cow position: chrX:19019110-19019313 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 54

Conread position: 550-744
Cow position: chrX:42282422-42282233 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 550-785
Cow position: chrX:35042219-35041977 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 168
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 87, 52

Conread position: 556-743
Cow position: chrX:35387914-35388104 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 134, 46

Conread position: 564-743
Cow position: chrX:38967628-38967452 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 38

Conread position: 570-734
Cow position: chrX:24149615-24149450 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 119, 32

Conread position: 579-747
Cow position: chrX:7806345-7806177 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 108, 16

Show alignments to all cow chromosomes.