Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8059C11.3.5
        

               Conread position:
               1-114
               

               Cow position:
               chr2:61155050-61154937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               112-251
               

               Cow position:
               chr2:61152017-61151878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               132
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               250-421
               

               Cow position:
               chr2:61150634-61150463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               160
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               637-726
               

               Cow position:
               chr2:61148512-61148423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               83
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               718-854
               

               Cow position:
               chr2:61147348-61147212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               125
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               851-1378
               

               Cow position:
               chr2:61147033-61146498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               542
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 268
               

               Conread position:
               1294-1695
               

               Cow position:
               chr2:61146327-61145901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               286
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               151, 72
               

               Conread position:
               1696-2165
               

               Cow position:
               chr2:61145879-61145397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 216
               

               Conread position:
               1931-2148
               

               Cow position:
               chr2:61143805-61143590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               109, 28
               

               Conread position:
               2633-2738
               

               Cow position:
               chr2:61144931-61144823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               91
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               10, 0
               
Show alignments to all cow chromosomes.