Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8059I23.5
        

               Conread position:
               48-165
               

               Cow position:
               chr1:79520641-79520524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               115
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               161-238
               

               Cow position:
               chr1:79520038-79519961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               78
               

               Alignm identity:
               78
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               236-361
               

               Cow position:
               chr1:79519523-79519398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               120
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               362-469
               

               Cow position:
               chr1:79516595-79516488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               108
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               469-596
               

               Cow position:
               chr1:79512948-79512820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               551-630
               

               Cow position:
               chr1:79512416-79512337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               80
               

               Alignm identity:
               78
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               629-704
               

               Cow position:
               chr1:79508042-79507967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               76
               

               Alignm identity:
               76
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               704-812
               

               Cow position:
               chr1:79507408-79507300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               109
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               810-894
               

               Cow position:
               chr1:79493206-79493122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               85
               

               Alignm identity:
               82
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.