Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8060A07.5
        

               Conread position:
               73-223
               

               Cow position:
               chr4:54142935-54143084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               132
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               199-300
               

               Cow position:
               chr4:54144040-54144141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               296-413
               

               Cow position:
               chr4:54144347-54144464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               479-569
               

               Cow position:
               chr4:54155455-54155548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               83
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               566-717
               

               Cow position:
               chr4:54164139-54164286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               77, 87
               

               Conread position:
               1076-1225
               

               Cow position:
               chr4:54164461-54164614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               49, 83
               

               Conread position:
               1235-1441
               

               Cow position:
               chr4:54164680-54164879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 75
               

               Conread position:
               1459-1666
               

               Cow position:
               chr4:54165211-54165418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 87
               
Show alignments to all cow chromosomes.