Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8060D19.3 |
| Conread position: | 289-761 |
| Cow position: | chr11:1489332-1488880 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 81 |
| Conread position: | 296-499 |
| Cow position: | chr11:37476155-37475943 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 296-589 |
| Cow position: | chr11:61400251-61399953 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 118, 167 |
| Conread position: | 296-601 |
| Cow position: | chr11:9601487-9601189 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 229 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 81, 48 |
| Conread position: | 296-657 |
| Cow position: | chr11:28108964-28109336 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 296-761 |
| Cow position: | chr11:28228939-28228476 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 215 |
| Conread position: | 296-761 |
| Cow position: | chr11:29613167-29612703 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 260 |
| Conread position: | 296-772 |
| Cow position: | chr11:9733851-9733377 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 255 |
| Conread position: | 296-772 |
| Cow position: | chr11:17106856-17106378 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 251 |
| Conread position: | 296-772 |
| Cow position: | chr11:17546989-17547461 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 255 |
| Conread position: | 296-772 |
| Cow position: | chr11:19063245-19062773 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 44 |
| Conread position: | 296-772 |
| Cow position: | chr11:20733409-20732931 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 33 |
| Conread position: | 296-772 |
| Cow position: | chr11:32452654-32453135 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 168 |
| Conread position: | 296-772 |
| Cow position: | chr11:44518038-44517562 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 255 |
| Conread position: | 296-772 |
| Cow position: | chr11:52420229-52420695 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 169 |
| Conread position: | 296-772 |
| Cow position: | chr11:57627226-57626748 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 168 |
| Conread position: | 296-772 |
| Cow position: | chr11:66729922-66730383 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 112 |
| Conread position: | 296-779 |
| Cow position: | chr11:67451321-67451802 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 71 |
| Conread position: | 297-425 |
| Cow position: | chr11:28064921-28065048 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 297-446 |
| Cow position: | chr11:31755140-31754994 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 297-451 |
| Cow position: | chr11:32982999-32982837 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 297-565 |
| Cow position: | chr11:87135604-87135858 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 240, 109 |
| Conread position: | 297-598 |
| Cow position: | chr11:21444320-21444599 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 184, 6 |
| Conread position: | 297-598 |
| Cow position: | chr11:74424424-74424733 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 40 |
| Conread position: | 297-599 |
| Cow position: | chr11:50042308-50042009 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 14, 92 |
| Conread position: | 297-600 |
| Cow position: | chr11:20511433-20511758 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 116, 24 |
| Conread position: | 297-708 |
| Cow position: | chr11:21899014-21898618 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 14 |
| Conread position: | 297-716 |
| Cow position: | chr11:44156419-44156013 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 31 |
| Conread position: | 297-744 |
| Cow position: | chr11:2358198-2358636 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 294 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 123, 101 |
| Conread position: | 297-744 |
| Cow position: | chr11:20506057-20506509 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 317 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 116, 24 |
| Conread position: | 297-761 |
| Cow position: | chr11:14728219-14727771 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 25 |
| Conread position: | 297-767 |
| Cow position: | chr11:4026782-4026313 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 85 |
| Conread position: | 297-767 |
| Cow position: | chr11:30123011-30122549 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 25 |
| Conread position: | 297-772 |
| Cow position: | chr11:47759449-47758972 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 24 |
| Conread position: | 297-772 |
| Cow position: | chr11:72310206-72309736 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 173 |
| Conread position: | 297-773 |
| Cow position: | chr11:3856049-3856507 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 54 |
| Conread position: | 297-773 |
| Cow position: | chr11:13065137-13064679 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 314 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 127, 16 |
| Conread position: | 297-773 |
| Cow position: | chr11:28391797-28392265 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 32 |
| Conread position: | 297-773 |
| Cow position: | chr11:49553345-49552847 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 67 |
| Conread position: | 297-773 |
| Cow position: | chr11:64355652-64356105 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 341 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 67, 25 |
| Conread position: | 297-790 |
| Cow position: | chr11:9205005-9204537 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 329 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 27, 33 |
| Conread position: | 297-791 |
| Cow position: | chr11:9156321-9155827 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 127 |
| Conread position: | 298-538 |
| Cow position: | chr11:36923364-36923122 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 108, 200 |
| Conread position: | 298-542 |
| Cow position: | chr11:9224717-9224480 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 191, 110 |
| Conread position: | 298-564 |
| Cow position: | chr11:60823256-60823514 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 82, 48 |
| Conread position: | 298-574 |
| Cow position: | chr11:24336377-24336107 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 41, 30 |
| Conread position: | 298-596 |
| Cow position: | chr11:31539959-31540261 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 35, 30 |
| Conread position: | 298-669 |
| Cow position: | chr11:4269573-4269205 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 259 |
| Conread position: | 298-716 |
| Cow position: | chr11:28053786-28053393 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 99 |
| Conread position: | 298-740 |
| Cow position: | chr11:44252626-44253074 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 258 |
| Conread position: | 298-761 |
| Cow position: | chr11:32685726-32686173 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 313 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 121, 39 |
| Conread position: | 298-772 |
| Cow position: | chr11:10848279-10848754 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 260 |
| Conread position: | 298-772 |
| Cow position: | chr11:11988961-11989435 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 259 |
| Conread position: | 298-772 |
| Cow position: | chr11:12357585-12357098 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 261 |
| Conread position: | 298-772 |
| Cow position: | chr11:26070220-26069738 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 318 |
| Conread position: | 298-772 |
| Cow position: | chr11:26124098-26123623 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 30 |
| Conread position: | 298-772 |
| Cow position: | chr11:31926993-31927454 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 115 |
| Conread position: | 298-772 |
| Cow position: | chr11:38834606-38834144 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 149 |
| Conread position: | 298-772 |
| Cow position: | chr11:41169865-41169392 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 159 |
| Conread position: | 298-772 |
| Cow position: | chr11:43513802-43513321 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 91 |
| Conread position: | 298-772 |
| Cow position: | chr11:53431221-53430732 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 211 |
| Conread position: | 298-772 |
| Cow position: | chr11:58135225-58135697 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 164 |
| Conread position: | 298-772 |
| Cow position: | chr11:87142410-87142885 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 49 |
| Conread position: | 298-773 |
| Cow position: | chr11:15943517-15943064 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 303 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 377, 115 |
| Conread position: | 298-773 |
| Cow position: | chr11:42311611-42311141 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 327 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 108, 29 |
| Conread position: | 298-779 |
| Cow position: | chr11:29667777-29667287 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 181 |
| Conread position: | 298-779 |
| Cow position: | chr11:71330424-71330909 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 258 |
| Conread position: | 298-791 |
| Cow position: | chr11:23880858-23881351 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 260 |
| Conread position: | 299-725 |
| Cow position: | chr11:35254425-35254021 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 293 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 115, 67 |
| Conread position: | 301-580 |
| Cow position: | chr11:4056659-4056383 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 120, 20 |
| Conread position: | 301-585 |
| Cow position: | chr11:33977624-33977323 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 112, 248 |
| Conread position: | 301-599 |
| Cow position: | chr11:9215940-9215655 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 136, 98 |
| Conread position: | 301-599 |
| Cow position: | chr11:52314713-52314415 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 99 |
| Conread position: | 301-601 |
| Cow position: | chr11:26564259-26563960 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 137, 65 |
| Conread position: | 301-601 |
| Cow position: | chr11:36324226-36324519 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 92, 106 |
| Conread position: | 301-769 |
| Cow position: | chr11:76373153-76372704 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 28 |
| Conread position: | 301-772 |
| Cow position: | chr11:30253067-30253529 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 27 |
| Conread position: | 301-772 |
| Cow position: | chr11:40775165-40774711 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 27 |
| Conread position: | 301-772 |
| Cow position: | chr11:44582503-44582039 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 59 |
| Conread position: | 301-773 |
| Cow position: | chr11:63654502-63654029 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 249 |
| Conread position: | 301-784 |
| Cow position: | chr11:75554167-75553695 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 328 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 55, 157 |
| Conread position: | 302-589 |
| Cow position: | chr11:42363582-42363879 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 107, 62 |
| Conread position: | 302-726 |
| Cow position: | chr11:39804572-39804980 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 19 |
| Conread position: | 303-761 |
| Cow position: | chr11:26548358-26548821 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 106 |
| Conread position: | 303-773 |
| Cow position: | chr11:10883141-10883593 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 313 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 26, 36 |
| Conread position: | 304-519 |
| Cow position: | chr11:4034511-4034291 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 49, 33 |
| Conread position: | 304-771 |
| Cow position: | chr11:50026913-50026443 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 332 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 117, 104 |
| Conread position: | 304-772 |
| Cow position: | chr11:24394148-24394618 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 218 |
| Conread position: | 306-583 |
| Cow position: | chr11:10869523-10869781 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 199 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 31, 75 |
| Conread position: | 306-609 |
| Cow position: | chr11:35504369-35504062 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 97, 196 |
| Conread position: | 306-761 |
| Cow position: | chr11:53286332-53285881 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 246 |
| Conread position: | 306-772 |
| Cow position: | chr11:85392989-85392530 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 157 |
| Conread position: | 307-594 |
| Cow position: | chr11:80792283-80791996 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 112, 99 |
| Conread position: | 307-600 |
| Cow position: | chr11:28420976-28421256 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 73, 21 |
| Conread position: | 307-772 |
| Cow position: | chr11:19101651-19101190 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 139 |
| Conread position: | 307-772 |
| Cow position: | chr11:73134127-73134606 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 244 |
| Conread position: | 308-787 |
| Cow position: | chr11:22938994-22938520 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 324 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 72, 8 |
| Conread position: | 310-772 |
| Cow position: | chr11:1495190-1494740 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 317 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 99, 238 |
| Conread position: | 311-434 |
| Cow position: | chr11:44490777-44490655 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 311-757 |
| Cow position: | chr11:45921767-45921321 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 310 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 84, 17 |
| Conread position: | 311-791 |
| Cow position: | chr11:2727578-2728049 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 316 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 108, 214 |
| Conread position: | 312-727 |
| Cow position: | chr11:81851871-81851482 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 284 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 29, 56 |
| Conread position: | 312-751 |
| Cow position: | chr11:30278436-30278868 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 34, 61 |
| Conread position: | 312-772 |
| Cow position: | chr11:3493831-3494293 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 220 |
| Conread position: | 312-779 |
| Cow position: | chr11:4063032-4062600 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 330 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 10, 66 |
| Conread position: | 317-771 |
| Cow position: | chr11:26074119-26073661 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 14 |
| Conread position: | 317-772 |
| Cow position: | chr11:67845723-67845268 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 234 |
| Conread position: | 318-750 |
| Cow position: | chr11:18887701-18888104 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 296 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 11, 21 |
| Conread position: | 330-779 |
| Cow position: | chr11:21011474-21011029 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 297 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 68, 195 |
| Conread position: | 331-772 |
| Cow position: | chr11:67154550-67154982 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 85 |
| Conread position: | 337-589 |
| Cow position: | chr11:10216273-10216012 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 76, 199 |
| Conread position: | 337-761 |
| Cow position: | chr11:18070070-18069646 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 299 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 89, 68 |
| Conread position: | 340-792 |
| Cow position: | chr11:80473403-80472968 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 294 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 93, 205 |
| Conread position: | 341-660 |
| Cow position: | chr11:21136996-21137302 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 342-599 |
| Cow position: | chr11:63275527-63275262 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 79, 44 |
| Conread position: | 347-715 |
| Cow position: | chr11:54216381-54216012 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 212 |
| Conread position: | 348-774 |
| Cow position: | chr11:26784138-26784557 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 66 |
| Conread position: | 349-602 |
| Cow position: | chr11:21928306-21928052 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 135, 64 |
| Conread position: | 359-789 |
| Cow position: | chr11:27657335-27657748 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 54 |
| Conread position: | 363-580 |
| Cow position: | chr11:38216662-38216421 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 208 |
| Conread position: | 399-602 |
| Cow position: | chr11:31932374-31932588 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 400-773 |
| Cow position: | chr11:49239028-49238655 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 273 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 25, 169 |
| Conread position: | 414-583 |
| Cow position: | chr11:26146248-26146079 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 75, 113 |
| Conread position: | 417-772 |
| Cow position: | chr11:7117372-7117715 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 20, 78 |
| Conread position: | 421-792 |
| Cow position: | chr11:50949375-50948996 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 275 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 70, 13 |
| Conread position: | 429-773 |
| Cow position: | chr11:10056478-10056804 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 59, 13 |
| Conread position: | 433-711 |
| Cow position: | chr11:54484306-54484039 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 60, 110 |
| Conread position: | 433-773 |
| Cow position: | chr11:49039403-49039076 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 60, 23 |
| Conread position: | 434-602 |
| Cow position: | chr11:3261475-3261645 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 57, 109 |
| Conread position: | 434-770 |
| Cow position: | chr11:2833300-2833609 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 57, 109 |
| Conread position: | 434-771 |
| Cow position: | chr11:25865864-25865542 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 104 |
| Conread position: | 436-596 |
| Cow position: | chr11:85210743-85210580 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 437-574 |
| Cow position: | chr11:24611413-24611546 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 438-599 |
| Cow position: | chr11:44489627-44489472 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 51, 22 |
| Conread position: | 438-786 |
| Cow position: | chr11:46779870-46779538 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 439-571 |
| Cow position: | chr11:31754508-31754642 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 109 |
| Conread position: | 441-773 |
| Cow position: | chr11:29232005-29231675 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 103 |
| Conread position: | 443-772 |
| Cow position: | chr11:23249489-23249166 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 16, 50 |
| Conread position: | 446-761 |
| Cow position: | chr11:27669006-27668703 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 231 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 47, 97 |
| Conread position: | 466-771 |
| Cow position: | chr11:30208140-30208431 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 27, 80 |
| Conread position: | 478-784 |
| Cow position: | chr11:40329966-40329668 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 199 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 66, 11 |
| Conread position: | 482-761 |
| Cow position: | chr11:47738519-47738248 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 123 |
| Conread position: | 486-784 |
| Cow position: | chr11:35894879-35894590 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 58, 120 |
| Conread position: | 507-772 |
| Cow position: | chr11:50836620-50836364 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 213, 38 |
| Conread position: | 512-779 |
| Cow position: | chr11:17119291-17119034 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 249, 36 |
| Conread position: | 603-787 |
| Cow position: | chr11:52808485-52808671 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 65, 127 |
| Conread position: | 604-772 |
| Cow position: | chr11:17281353-17281175 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 34, 125 |
| Conread position: | 608-772 |
| Cow position: | chr11:9215377-9215205 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 25, 10 |
| Conread position: | 616-772 |
| Cow position: | chr11:4055187-4055027 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 19, 105 |
| Conread position: | 622-791 |
| Cow position: | chr11:15986396-15986572 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 14, 30 |
| Conread position: | 630-772 |
| Cow position: | chr11:86876719-86876580 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 90, 12 |
| Conread position: | 638-772 |
| Cow position: | chr11:11590133-11590271 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 37, 9 |
| Conread position: | 639-771 |
| Cow position: | chr11:31863256-31863387 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 121, 88 |
| Conread position: | 639-772 |
| Cow position: | chr11:41234181-41234318 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 8 |
Show alignments to all cow chromosomes.