Cow genome map

Conread name: Ss1.1-Pig4-TMW8060D19.3

Conread position: 294-601
Cow position: chr12:8139005-8138712 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 220
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 77, 83

Conread position: 294-770
Cow position: chr12:20996970-20996498 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 178

Conread position: 294-771
Cow position: chr12:21199094-21199570 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 264

Conread position: 296-535
Cow position: chr12:22570710-22570465 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 168
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 118, 142

Conread position: 296-578
Cow position: chr12:21387129-21386837 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 109, 251

Conread position: 296-602
Cow position: chr12:31202375-31202059 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 255

Conread position: 296-772
Cow position: chr12:21253499-21252995 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 348
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 113, 314

Conread position: 296-772
Cow position: chr12:23141079-23140584 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 266

Conread position: 296-772
Cow position: chr12:32654660-32655141 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 90

Conread position: 297-542
Cow position: chr12:25262350-25262102 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 174
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 115, 24

Conread position: 297-772
Cow position: chr12:20843732-20844182 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 201

Conread position: 297-772
Cow position: chr12:48471763-48471296 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 31

Conread position: 297-784
Cow position: chr12:24977701-24977234 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 337
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 98, 34

Conread position: 298-503
Cow position: chr12:29442521-29442736 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 120, 82

Conread position: 298-718
Cow position: chr12:25099957-25099531 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 170

Conread position: 298-771
Cow position: chr12:8676980-8676500 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 30

Conread position: 298-772
Cow position: chr12:1403608-1404086 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 262

Conread position: 298-772
Cow position: chr12:6405526-6405048 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 266

Conread position: 298-772
Cow position: chr12:11099338-11099817 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 242

Conread position: 298-772
Cow position: chr12:27854848-27854374 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 259

Conread position: 298-772
Cow position: chr12:27931788-27931318 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 166

Conread position: 298-772
Cow position: chr12:42858421-42857943 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 170

Conread position: 301-526
Cow position: chr12:21128247-21128471 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 40, 27

Conread position: 301-561
Cow position: chr12:11580932-11581193 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 188
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 125, 216

Conread position: 301-601
Cow position: chr12:27513458-27513763 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 209
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 119, 27

Conread position: 301-607
Cow position: chr12:14695134-14695441 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 213
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 90, 107

Conread position: 301-772
Cow position: chr12:1888441-1887968 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 170

Conread position: 301-772
Cow position: chr12:3362058-3362526 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 164

Conread position: 301-772
Cow position: chr12:42607147-42606660 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 231

Conread position: 302-718
Cow position: chr12:5144808-5145210 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 289
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 9, 27

Conread position: 303-768
Cow position: chr12:17979851-17980291 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 311
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 101, 20

Conread position: 304-772
Cow position: chr12:37560130-37560604 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 263

Conread position: 305-772
Cow position: chr12:21942862-21943334 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 111

Conread position: 306-594
Cow position: chr12:7863748-7863454 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 202
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 106, 15

Conread position: 306-714
Cow position: chr12:600240-599842 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 288
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 107, 73

Conread position: 306-772
Cow position: chr12:21209777-21210255 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 318

Conread position: 310-772
Cow position: chr12:35345677-35346121 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 103

Conread position: 312-483
Cow position: chr12:35313268-35313089 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 106, 96

Conread position: 314-772
Cow position: chr12:1776836-1776375 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 95

Conread position: 318-480
Cow position: chr12:15036639-15036472 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 117, 90

Conread position: 320-784
Cow position: chr12:28005042-28005478 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 313
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 100, 88

Conread position: 328-602
Cow position: chr12:349548-349829 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 209
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 118, 86

Conread position: 332-760
Cow position: chr12:18465102-18465482 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 289
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 98, 36

Conread position: 348-770
Cow position: chr12:14661184-14660761 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 124

Conread position: 357-784
Cow position: chr12:19870090-19870491 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 31

Conread position: 395-779
Cow position: chr12:32677760-32677398 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 267
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 24, 51

Conread position: 402-772
Cow position: chr12:34174343-34174708 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 34

Conread position: 434-602
Cow position: chr12:20430578-20430749 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 434-773
Cow position: chr12:24433825-24433493 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 109

Conread position: 438-772
Cow position: chr12:22204451-22204121 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 242
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 114

Conread position: 440-772
Cow position: chr12:21429273-21429599 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 236
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 51, 108

Conread position: 467-602
Cow position: chr12:20461775-20461906 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 81

Conread position: 489-772
Cow position: chr12:24994646-24994372 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 204
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 272, 56

Conread position: 543-772
Cow position: chr12:22568385-22568164 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 98, 57

Conread position: 566-772
Cow position: chr12:34174723-34174933 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 129
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 19, 74

Conread position: 619-772
Cow position: chr12:21092287-21092136 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 41

Show alignments to all cow chromosomes.