Cow genome map
Conread name: | Ss1.1-Pig4-TMW8060D19.3 |
Conread position: | 294-601 |
Cow position: | chr12:8139005-8138712 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 220 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 77, 83 |
Conread position: | 294-770 |
Cow position: | chr12:20996970-20996498 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 125, 178 |
Conread position: | 294-771 |
Cow position: | chr12:21199094-21199570 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 264 |
Conread position: | 296-535 |
Cow position: | chr12:22570710-22570465 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 168 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 118, 142 |
Conread position: | 296-578 |
Cow position: | chr12:21387129-21386837 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 205 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 109, 251 |
Conread position: | 296-602 |
Cow position: | chr12:31202375-31202059 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 255 |
Conread position: | 296-772 |
Cow position: | chr12:21253499-21252995 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 348 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 113, 314 |
Conread position: | 296-772 |
Cow position: | chr12:23141079-23140584 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 266 |
Conread position: | 296-772 |
Cow position: | chr12:32654660-32655141 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 90 |
Conread position: | 297-542 |
Cow position: | chr12:25262350-25262102 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 174 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 115, 24 |
Conread position: | 297-772 |
Cow position: | chr12:20843732-20844182 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 201 |
Conread position: | 297-772 |
Cow position: | chr12:48471763-48471296 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 31 |
Conread position: | 297-784 |
Cow position: | chr12:24977701-24977234 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 337 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 98, 34 |
Conread position: | 298-503 |
Cow position: | chr12:29442521-29442736 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 159 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 120, 82 |
Conread position: | 298-718 |
Cow position: | chr12:25099957-25099531 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 170 |
Conread position: | 298-771 |
Cow position: | chr12:8676980-8676500 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 30 |
Conread position: | 298-772 |
Cow position: | chr12:1403608-1404086 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 262 |
Conread position: | 298-772 |
Cow position: | chr12:6405526-6405048 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 266 |
Conread position: | 298-772 |
Cow position: | chr12:11099338-11099817 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 242 |
Conread position: | 298-772 |
Cow position: | chr12:27854848-27854374 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 259 |
Conread position: | 298-772 |
Cow position: | chr12:27931788-27931318 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 166 |
Conread position: | 298-772 |
Cow position: | chr12:42858421-42857943 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 170 |
Conread position: | 301-526 |
Cow position: | chr12:21128247-21128471 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 164 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 40, 27 |
Conread position: | 301-561 |
Cow position: | chr12:11580932-11581193 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 188 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 125, 216 |
Conread position: | 301-601 |
Cow position: | chr12:27513458-27513763 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 209 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 119, 27 |
Conread position: | 301-607 |
Cow position: | chr12:14695134-14695441 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 213 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 90, 107 |
Conread position: | 301-772 |
Cow position: | chr12:1888441-1887968 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 170 |
Conread position: | 301-772 |
Cow position: | chr12:3362058-3362526 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 164 |
Conread position: | 301-772 |
Cow position: | chr12:42607147-42606660 (view UCSC Genome Browser custom track) |
Alignm length: | 496 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 231 |
Conread position: | 302-718 |
Cow position: | chr12:5144808-5145210 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 289 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 9, 27 |
Conread position: | 303-768 |
Cow position: | chr12:17979851-17980291 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 311 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 101, 20 |
Conread position: | 304-772 |
Cow position: | chr12:37560130-37560604 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 263 |
Conread position: | 305-772 |
Cow position: | chr12:21942862-21943334 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 111 |
Conread position: | 306-594 |
Cow position: | chr12:7863748-7863454 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 202 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 106, 15 |
Conread position: | 306-714 |
Cow position: | chr12:600240-599842 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 288 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 107, 73 |
Conread position: | 306-772 |
Cow position: | chr12:21209777-21210255 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 318 |
Conread position: | 310-772 |
Cow position: | chr12:35345677-35346121 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 103 |
Conread position: | 312-483 |
Cow position: | chr12:35313268-35313089 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 134 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 106, 96 |
Conread position: | 314-772 |
Cow position: | chr12:1776836-1776375 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 95 |
Conread position: | 318-480 |
Cow position: | chr12:15036639-15036472 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 125 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 117, 90 |
Conread position: | 320-784 |
Cow position: | chr12:28005042-28005478 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 313 |
Alignm E-value: | 6e-36 |
Alignm gaps (pig, cow): | 100, 88 |
Conread position: | 328-602 |
Cow position: | chr12:349548-349829 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 209 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 118, 86 |
Conread position: | 332-760 |
Cow position: | chr12:18465102-18465482 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 289 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 98, 36 |
Conread position: | 348-770 |
Cow position: | chr12:14661184-14660761 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 124 |
Conread position: | 357-784 |
Cow position: | chr12:19870090-19870491 (view UCSC Genome Browser custom track) |
Alignm length: | 432 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 31 |
Conread position: | 395-779 |
Cow position: | chr12:32677760-32677398 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 267 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 24, 51 |
Conread position: | 402-772 |
Cow position: | chr12:34174343-34174708 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 270 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 34 |
Conread position: | 434-602 |
Cow position: | chr12:20430578-20430749 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 131 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 434-773 |
Cow position: | chr12:24433825-24433493 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 259 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 109 |
Conread position: | 438-772 |
Cow position: | chr12:22204451-22204121 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 242 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 25, 114 |
Conread position: | 440-772 |
Cow position: | chr12:21429273-21429599 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 236 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 51, 108 |
Conread position: | 467-602 |
Cow position: | chr12:20461775-20461906 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 110 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 26, 81 |
Conread position: | 489-772 |
Cow position: | chr12:24994646-24994372 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 204 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 272, 56 |
Conread position: | 543-772 |
Cow position: | chr12:22568385-22568164 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 165 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 98, 57 |
Conread position: | 566-772 |
Cow position: | chr12:34174723-34174933 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 129 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 19, 74 |
Conread position: | 619-772 |
Cow position: | chr12:21092287-21092136 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 119 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 28, 41 |
Show alignments to all cow chromosomes.