Cow genome map
Conread name: | Ss1.1-Pig4-TMW8060D19.3 |
Conread position: | 296-602 |
Cow position: | chr13:17998452-17998768 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 255 |
Conread position: | 296-602 |
Cow position: | chr13:47229105-47228788 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 225 |
Alignm E-value: | 4.99983e-42 |
Alignm gaps (pig, cow): | 108, 168 |
Conread position: | 296-761 |
Cow position: | chr13:31732994-31732537 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 62 |
Conread position: | 296-771 |
Cow position: | chr13:17309363-17309833 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 68 |
Conread position: | 296-772 |
Cow position: | chr13:2387913-2387434 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 168 |
Conread position: | 296-772 |
Cow position: | chr13:21697147-21697635 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 248 |
Conread position: | 296-772 |
Cow position: | chr13:21839299-21838836 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 174 |
Conread position: | 296-772 |
Cow position: | chr13:28860058-28860535 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 255 |
Conread position: | 296-772 |
Cow position: | chr13:32984448-32983973 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 165 |
Conread position: | 296-772 |
Cow position: | chr13:49974559-49975037 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 255 |
Conread position: | 297-519 |
Cow position: | chr13:15450224-15449995 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 176 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 133, 111 |
Conread position: | 297-761 |
Cow position: | chr13:17330865-17330423 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 311 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 194, 53 |
Conread position: | 297-770 |
Cow position: | chr13:6667236-6666770 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 257 |
Conread position: | 297-772 |
Cow position: | chr13:34324659-34324207 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 341, 118 |
Conread position: | 297-772 |
Cow position: | chr13:43590226-43590688 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 198 |
Conread position: | 297-773 |
Cow position: | chr13:50661198-50661646 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 327 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 123, 29 |
Conread position: | 297-784 |
Cow position: | chr13:43982203-43981704 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 19 |
Conread position: | 298-489 |
Cow position: | chr13:1592257-1592065 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 141 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 138, 119 |
Conread position: | 298-669 |
Cow position: | chr13:23002111-23001748 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 257 |
Conread position: | 298-673 |
Cow position: | chr13:15923482-15923112 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 286 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 30 |
Conread position: | 298-716 |
Cow position: | chr13:32546287-32546696 (view UCSC Genome Browser custom track) |
Alignm length: | 430 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 259 |
Conread position: | 298-761 |
Cow position: | chr13:4942280-4942744 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 253 |
Conread position: | 298-772 |
Cow position: | chr13:3653422-3652942 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 253 |
Conread position: | 298-772 |
Cow position: | chr13:4484692-4485160 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 121, 84 |
Conread position: | 298-772 |
Cow position: | chr13:13900765-13901237 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 257 |
Conread position: | 298-772 |
Cow position: | chr13:14402200-14401737 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 215 |
Conread position: | 298-772 |
Cow position: | chr13:31611410-31610940 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 30 |
Conread position: | 298-772 |
Cow position: | chr13:31729998-31729532 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 259 |
Conread position: | 298-772 |
Cow position: | chr13:34041441-34040963 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 261 |
Conread position: | 298-772 |
Cow position: | chr13:35758180-35758652 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 64 |
Conread position: | 299-772 |
Cow position: | chr13:13325827-13326296 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 32 |
Conread position: | 301-574 |
Cow position: | chr13:44652919-44652647 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 201 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 40, 165 |
Conread position: | 301-717 |
Cow position: | chr13:5625087-5624671 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 145, 107 |
Conread position: | 301-772 |
Cow position: | chr13:34938351-34938809 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 88 |
Conread position: | 302-602 |
Cow position: | chr13:34049643-34049946 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 213 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 103, 39 |
Conread position: | 303-772 |
Cow position: | chr13:37835423-37834956 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 305 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 121, 111 |
Conread position: | 304-771 |
Cow position: | chr13:15543444-15543910 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 169 |
Conread position: | 304-771 |
Cow position: | chr13:31555839-31555385 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 316 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 100, 199 |
Conread position: | 304-772 |
Cow position: | chr13:11797816-11797336 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 366 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 131, 104 |
Conread position: | 305-601 |
Cow position: | chr13:61052117-61051830 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 200 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 107, 72 |
Conread position: | 305-602 |
Cow position: | chr13:57024598-57024894 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 222 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 131, 23 |
Conread position: | 306-601 |
Cow position: | chr13:11738826-11739126 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 217 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 35, 20 |
Conread position: | 306-772 |
Cow position: | chr13:9045671-9046130 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 222 |
Conread position: | 306-772 |
Cow position: | chr13:34030526-34030968 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 318 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 108, 45 |
Conread position: | 307-601 |
Cow position: | chr13:56832986-56833283 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 197 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 45, 53 |
Conread position: | 307-602 |
Cow position: | chr13:6148129-6148430 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 208 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 102, 64 |
Conread position: | 307-772 |
Cow position: | chr13:678655-679122 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 249 |
Conread position: | 307-772 |
Cow position: | chr13:50110358-50110824 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 248 |
Conread position: | 311-792 |
Cow position: | chr13:5627921-5627460 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 307 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 119, 65 |
Conread position: | 312-609 |
Cow position: | chr13:30276407-30276103 (view UCSC Genome Browser custom track) |
Alignm length: | 307 |
Alignm identity: | 197 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 77, 102 |
Conread position: | 312-721 |
Cow position: | chr13:8796886-8796495 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 272 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 110, 20 |
Conread position: | 312-761 |
Cow position: | chr13:14177933-14177496 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 320 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 146 |
Conread position: | 312-772 |
Cow position: | chr13:48358552-48358999 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 96 |
Conread position: | 312-778 |
Cow position: | chr13:30239228-30239704 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 106, 96 |
Conread position: | 312-784 |
Cow position: | chr13:25692587-25693057 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 84 |
Conread position: | 314-512 |
Cow position: | chr13:30304203-30304415 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 161 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 66, 201 |
Conread position: | 315-779 |
Cow position: | chr13:34342819-34343283 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 241 |
Conread position: | 317-761 |
Cow position: | chr13:31507831-31508266 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 331 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 146 |
Conread position: | 328-772 |
Cow position: | chr13:11794131-11793707 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 251, 87 |
Conread position: | 330-772 |
Cow position: | chr13:32924195-32923764 (view UCSC Genome Browser custom track) |
Alignm length: | 458 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 212, 97 |
Conread position: | 331-533 |
Cow position: | chr13:26845216-26845434 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 165 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 107, 77 |
Conread position: | 331-601 |
Cow position: | chr13:28670286-28670025 (view UCSC Genome Browser custom track) |
Alignm length: | 275 |
Alignm identity: | 203 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 27, 77 |
Conread position: | 337-772 |
Cow position: | chr13:34909087-34908668 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 71 |
Conread position: | 353-772 |
Cow position: | chr13:6358074-6358495 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 304 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 203 |
Conread position: | 358-602 |
Cow position: | chr13:15519564-15519316 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 190 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 55, 110 |
Conread position: | 377-681 |
Cow position: | chr13:30654420-30654112 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 5 |
Conread position: | 382-772 |
Cow position: | chr13:5501019-5500628 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 169 |
Conread position: | 400-781 |
Cow position: | chr13:3482818-3482453 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 272 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 25, 47 |
Conread position: | 417-772 |
Cow position: | chr13:42090670-42090322 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 54 |
Conread position: | 417-774 |
Cow position: | chr13:26777161-26777491 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 244 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 68, 24 |
Conread position: | 428-772 |
Cow position: | chr13:60648769-60648434 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 39, 32 |
Conread position: | 434-607 |
Cow position: | chr13:30011774-30011604 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 136 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 43, 56 |
Conread position: | 434-772 |
Cow position: | chr13:34764788-34764470 (view UCSC Genome Browser custom track) |
Alignm length: | 343 |
Alignm identity: | 240 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 235, 91 |
Conread position: | 434-772 |
Cow position: | chr13:42217642-42217311 (view UCSC Genome Browser custom track) |
Alignm length: | 345 |
Alignm identity: | 249 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 26 |
Conread position: | 434-772 |
Cow position: | chr13:60468464-60468797 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 115 |
Conread position: | 436-601 |
Cow position: | chr13:28347212-28347049 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 122 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 136, 42 |
Conread position: | 436-699 |
Cow position: | chr13:44697919-44698171 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 181 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 231, 85 |
Conread position: | 456-772 |
Cow position: | chr13:16253455-16253140 (view UCSC Genome Browser custom track) |
Alignm length: | 326 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 20 |
Conread position: | 468-772 |
Cow position: | chr13:47575160-47575463 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 23, 76 |
Conread position: | 473-772 |
Cow position: | chr13:50193318-50193027 (view UCSC Genome Browser custom track) |
Alignm length: | 305 |
Alignm identity: | 215 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 19, 75 |
Conread position: | 481-772 |
Cow position: | chr13:20541171-20540885 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 215 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 82, 59 |
Conread position: | 550-772 |
Cow position: | chr13:14186157-14186371 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 163 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 211, 54 |
Conread position: | 553-787 |
Cow position: | chr13:728378-728615 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 164 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 38, 177 |
Conread position: | 603-772 |
Cow position: | chr13:33335117-33334948 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 140 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 68, 44 |
Conread position: | 603-772 |
Cow position: | chr13:60423946-60424121 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 135 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 30, 72 |
Conread position: | 603-773 |
Cow position: | chr13:62024760-62024592 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 124 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 44, 57 |
Conread position: | 605-768 |
Cow position: | chr13:26845457-26845611 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 125 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 16, 43 |
Conread position: | 605-772 |
Cow position: | chr13:33524761-33524585 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 141 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 33, 47 |
Show alignments to all cow chromosomes.