Cow genome map

Conread name: Ss1.1-Pig4-TMW8060D19.3

Conread position: 296-602
Cow position: chr13:17998452-17998768 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 255

Conread position: 296-602
Cow position: chr13:47229105-47228788 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 225
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 108, 168

Conread position: 296-761
Cow position: chr13:31732994-31732537 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 62

Conread position: 296-771
Cow position: chr13:17309363-17309833 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 68

Conread position: 296-772
Cow position: chr13:2387913-2387434 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 168

Conread position: 296-772
Cow position: chr13:21697147-21697635 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 248

Conread position: 296-772
Cow position: chr13:21839299-21838836 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 174

Conread position: 296-772
Cow position: chr13:28860058-28860535 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 255

Conread position: 296-772
Cow position: chr13:32984448-32983973 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 165

Conread position: 296-772
Cow position: chr13:49974559-49975037 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 255

Conread position: 297-519
Cow position: chr13:15450224-15449995 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 176
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 133, 111

Conread position: 297-761
Cow position: chr13:17330865-17330423 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 311
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 194, 53

Conread position: 297-770
Cow position: chr13:6667236-6666770 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 257

Conread position: 297-772
Cow position: chr13:34324659-34324207 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 118

Conread position: 297-772
Cow position: chr13:43590226-43590688 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 198

Conread position: 297-773
Cow position: chr13:50661198-50661646 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 327
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 123, 29

Conread position: 297-784
Cow position: chr13:43982203-43981704 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 19

Conread position: 298-489
Cow position: chr13:1592257-1592065 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 138, 119

Conread position: 298-669
Cow position: chr13:23002111-23001748 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 257

Conread position: 298-673
Cow position: chr13:15923482-15923112 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 30

Conread position: 298-716
Cow position: chr13:32546287-32546696 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 259

Conread position: 298-761
Cow position: chr13:4942280-4942744 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 253

Conread position: 298-772
Cow position: chr13:3653422-3652942 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 253

Conread position: 298-772
Cow position: chr13:4484692-4485160 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 84

Conread position: 298-772
Cow position: chr13:13900765-13901237 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 257

Conread position: 298-772
Cow position: chr13:14402200-14401737 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 215

Conread position: 298-772
Cow position: chr13:31611410-31610940 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 30

Conread position: 298-772
Cow position: chr13:31729998-31729532 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 259

Conread position: 298-772
Cow position: chr13:34041441-34040963 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 261

Conread position: 298-772
Cow position: chr13:35758180-35758652 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 64

Conread position: 299-772
Cow position: chr13:13325827-13326296 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 32

Conread position: 301-574
Cow position: chr13:44652919-44652647 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 201
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 40, 165

Conread position: 301-717
Cow position: chr13:5625087-5624671 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 107

Conread position: 301-772
Cow position: chr13:34938351-34938809 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 88

Conread position: 302-602
Cow position: chr13:34049643-34049946 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 213
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 103, 39

Conread position: 303-772
Cow position: chr13:37835423-37834956 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 305
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 121, 111

Conread position: 304-771
Cow position: chr13:15543444-15543910 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 169

Conread position: 304-771
Cow position: chr13:31555839-31555385 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 316
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 100, 199

Conread position: 304-772
Cow position: chr13:11797816-11797336 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 104

Conread position: 305-601
Cow position: chr13:61052117-61051830 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 200
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 107, 72

Conread position: 305-602
Cow position: chr13:57024598-57024894 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 222
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 131, 23

Conread position: 306-601
Cow position: chr13:11738826-11739126 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 217
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 35, 20

Conread position: 306-772
Cow position: chr13:9045671-9046130 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 222

Conread position: 306-772
Cow position: chr13:34030526-34030968 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 318
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 108, 45

Conread position: 307-601
Cow position: chr13:56832986-56833283 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 197
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 45, 53

Conread position: 307-602
Cow position: chr13:6148129-6148430 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 208
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 102, 64

Conread position: 307-772
Cow position: chr13:678655-679122 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 249

Conread position: 307-772
Cow position: chr13:50110358-50110824 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 248

Conread position: 311-792
Cow position: chr13:5627921-5627460 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 307
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 119, 65

Conread position: 312-609
Cow position: chr13:30276407-30276103 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 197
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 77, 102

Conread position: 312-721
Cow position: chr13:8796886-8796495 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 272
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 110, 20

Conread position: 312-761
Cow position: chr13:14177933-14177496 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 146

Conread position: 312-772
Cow position: chr13:48358552-48358999 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 96

Conread position: 312-778
Cow position: chr13:30239228-30239704 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 96

Conread position: 312-784
Cow position: chr13:25692587-25693057 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 84

Conread position: 314-512
Cow position: chr13:30304203-30304415 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 66, 201

Conread position: 315-779
Cow position: chr13:34342819-34343283 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 241

Conread position: 317-761
Cow position: chr13:31507831-31508266 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 146

Conread position: 328-772
Cow position: chr13:11794131-11793707 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 87

Conread position: 330-772
Cow position: chr13:32924195-32923764 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 97

Conread position: 331-533
Cow position: chr13:26845216-26845434 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 165
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 107, 77

Conread position: 331-601
Cow position: chr13:28670286-28670025 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 27, 77

Conread position: 337-772
Cow position: chr13:34909087-34908668 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 71

Conread position: 353-772
Cow position: chr13:6358074-6358495 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 203

Conread position: 358-602
Cow position: chr13:15519564-15519316 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 55, 110

Conread position: 377-681
Cow position: chr13:30654420-30654112 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 5

Conread position: 382-772
Cow position: chr13:5501019-5500628 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 169

Conread position: 400-781
Cow position: chr13:3482818-3482453 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 272
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 25, 47

Conread position: 417-772
Cow position: chr13:42090670-42090322 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 54

Conread position: 417-774
Cow position: chr13:26777161-26777491 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 244
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 68, 24

Conread position: 428-772
Cow position: chr13:60648769-60648434 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 32

Conread position: 434-607
Cow position: chr13:30011774-30011604 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 43, 56

Conread position: 434-772
Cow position: chr13:34764788-34764470 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 240
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 235, 91

Conread position: 434-772
Cow position: chr13:42217642-42217311 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 26

Conread position: 434-772
Cow position: chr13:60468464-60468797 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 115

Conread position: 436-601
Cow position: chr13:28347212-28347049 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 136, 42

Conread position: 436-699
Cow position: chr13:44697919-44698171 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 231, 85

Conread position: 456-772
Cow position: chr13:16253455-16253140 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 20

Conread position: 468-772
Cow position: chr13:47575160-47575463 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 76

Conread position: 473-772
Cow position: chr13:50193318-50193027 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 19, 75

Conread position: 481-772
Cow position: chr13:20541171-20540885 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 82, 59

Conread position: 550-772
Cow position: chr13:14186157-14186371 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 211, 54

Conread position: 553-787
Cow position: chr13:728378-728615 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 38, 177

Conread position: 603-772
Cow position: chr13:33335117-33334948 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 68, 44

Conread position: 603-772
Cow position: chr13:60423946-60424121 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 30, 72

Conread position: 603-773
Cow position: chr13:62024760-62024592 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 57

Conread position: 605-768
Cow position: chr13:26845457-26845611 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 16, 43

Conread position: 605-772
Cow position: chr13:33524761-33524585 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 33, 47

Show alignments to all cow chromosomes.