Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8060D19.3
        

               Conread position:
               296-602
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 255
               

               Conread position:
               296-602
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               225
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               108, 168
               

               Conread position:
               296-761
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 62
               

               Conread position:
               296-771
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 68
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 168
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 248
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 174
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 255
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 165
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 255
               

               Conread position:
               297-519
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               133, 111
               

               Conread position:
               297-761
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               311
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               194, 53
               

               Conread position:
               297-770
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 257
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               341, 118
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 198
               

               Conread position:
               297-773
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               327
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               123, 29
               

               Conread position:
               297-784
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 19
               

               Conread position:
               298-489
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               138, 119
               

               Conread position:
               298-669
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 257
               

               Conread position:
               298-673
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 30
               

               Conread position:
               298-716
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 259
               

               Conread position:
               298-761
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 253
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 253
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 84
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 257
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 215
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 30
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 259
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 261
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 64
               

               Conread position:
               299-772
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 32
               

               Conread position:
               301-574
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               40, 165
               

               Conread position:
               301-717
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 107
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 88
               

               Conread position:
               302-602
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               103, 39
               

               Conread position:
               303-772
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               305
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               121, 111
               

               Conread position:
               304-771
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 169
               

               Conread position:
               304-771
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               316
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               100, 199
               

               Conread position:
               304-772
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 104
               

               Conread position:
               305-601
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               107, 72
               

               Conread position:
               305-602
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               222
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               131, 23
               

               Conread position:
               306-601
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               35, 20
               

               Conread position:
               306-772
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 222
               

               Conread position:
               306-772
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               318
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               108, 45
               

               Conread position:
               307-601
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               45, 53
               

               Conread position:
               307-602
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               102, 64
               

               Conread position:
               307-772
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 249
               

               Conread position:
               307-772
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 248
               

               Conread position:
               311-792
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               307
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               119, 65
               

               Conread position:
               312-609
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               77, 102
               

               Conread position:
               312-721
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               272
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               110, 20
               

               Conread position:
               312-761
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 146
               

               Conread position:
               312-772
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 96
               

               Conread position:
               312-778
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 96
               

               Conread position:
               312-784
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 84
               

               Conread position:
               314-512
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               66, 201
               

               Conread position:
               315-779
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 241
               

               Conread position:
               317-761
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 146
               

               Conread position:
               328-772
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 87
               

               Conread position:
               330-772
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 97
               

               Conread position:
               331-533
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               107, 77
               

               Conread position:
               331-601
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               27, 77
               

               Conread position:
               337-772
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 71
               

               Conread position:
               353-772
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 203
               

               Conread position:
               358-602
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               55, 110
               

               Conread position:
               377-681
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 5
               

               Conread position:
               382-772
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 169
               

               Conread position:
               400-781
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               272
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               25, 47
               

               Conread position:
               417-772
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 54
               

               Conread position:
               417-774
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               68, 24
               

               Conread position:
               428-772
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 32
               

               Conread position:
               434-607
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               43, 56
               

               Conread position:
               434-772
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               240
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               235, 91
               

               Conread position:
               434-772
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               434-772
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 115
               

               Conread position:
               436-601
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               136, 42
               

               Conread position:
               436-699
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               231, 85
               

               Conread position:
               456-772
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 20
               

               Conread position:
               468-772
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 76
               

               Conread position:
               473-772
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               19, 75
               

               Conread position:
               481-772
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               82, 59
               

               Conread position:
               550-772
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               211, 54
               

               Conread position:
               553-787
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               38, 177
               

               Conread position:
               603-772
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               68, 44
               

               Conread position:
               603-772
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               30, 72
               

               Conread position:
               603-773
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               44, 57
               

               Conread position:
               605-768
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               16, 43
               

               Conread position:
               605-772
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               33, 47
               
Show alignments to all cow chromosomes.