Cow genome map

Conread name: Ss1.1-Pig4-TMW8060D19.3

Conread position: 260-602
Cow position:
Alignm length: 346
Alignm identity: 204
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 144, 121

Conread position: 286-773
Cow position:
Alignm length: 518
Alignm identity: 351
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 134, 122

Conread position: 292-601
Cow position:
Alignm length: 321
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 265

Conread position: 294-772
Cow position:
Alignm length: 492
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 175

Conread position: 296-574
Cow position:
Alignm length: 285
Alignm identity: 203
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 123, 31

Conread position: 296-577
Cow position:
Alignm length: 294
Alignm identity: 206
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 109, 168

Conread position: 296-772
Cow position:
Alignm length: 491
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 71

Conread position: 296-772
Cow position:
Alignm length: 490
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 175

Conread position: 296-772
Cow position:
Alignm length: 489
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 255

Conread position: 296-772
Cow position:
Alignm length: 490
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 249

Conread position: 296-772
Cow position:
Alignm length: 487
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 100

Conread position: 296-772
Cow position:
Alignm length: 499
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 328

Conread position: 296-773
Cow position:
Alignm length: 495
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 117

Conread position: 296-781
Cow position:
Alignm length: 490
Alignm identity: 317
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 146, 28

Conread position: 297-422
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 297-537
Cow position:
Alignm length: 253
Alignm identity: 186
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 123, 0

Conread position: 297-573
Cow position:
Alignm length: 278
Alignm identity: 185
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 221, 120

Conread position: 297-575
Cow position:
Alignm length: 291
Alignm identity: 209
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 129, 33

Conread position: 297-602
Cow position:
Alignm length: 327
Alignm identity: 227
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 101, 0

Conread position: 297-609
Cow position:
Alignm length: 323
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 111

Conread position: 297-642
Cow position:
Alignm length: 361
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 117

Conread position: 297-713
Cow position:
Alignm length: 433
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 258

Conread position: 297-718
Cow position:
Alignm length: 432
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 111

Conread position: 297-742
Cow position:
Alignm length: 457
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 254

Conread position: 297-768
Cow position:
Alignm length: 478
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 24

Conread position: 297-771
Cow position:
Alignm length: 488
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 23

Conread position: 297-772
Cow position:
Alignm length: 506
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 250

Conread position: 297-772
Cow position:
Alignm length: 486
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 34

Conread position: 297-772
Cow position:
Alignm length: 489
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 117

Conread position: 297-772
Cow position:
Alignm length: 489
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 244

Conread position: 297-773
Cow position:
Alignm length: 489
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 25

Conread position: 297-773
Cow position:
Alignm length: 495
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 74

Conread position: 297-779
Cow position:
Alignm length: 491
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 129

Conread position: 297-784
Cow position:
Alignm length: 496
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 84

Conread position: 298-565
Cow position:
Alignm length: 274
Alignm identity: 182
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 124, 99

Conread position: 298-602
Cow position:
Alignm length: 323
Alignm identity: 221
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 116, 38

Conread position: 298-748
Cow position:
Alignm length: 468
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 265

Conread position: 298-761
Cow position:
Alignm length: 471
Alignm identity: 308
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 18

Conread position: 298-771
Cow position:
Alignm length: 484
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 31

Conread position: 298-771
Cow position:
Alignm length: 492
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 259

Conread position: 298-772
Cow position:
Alignm length: 484
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 170

Conread position: 298-772
Cow position:
Alignm length: 482
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 49

Conread position: 298-772
Cow position:
Alignm length: 493
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 170

Conread position: 298-772
Cow position:
Alignm length: 493
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 166

Conread position: 298-772
Cow position:
Alignm length: 499
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 35

Conread position: 298-772
Cow position:
Alignm length: 488
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 52

Conread position: 298-773
Cow position:
Alignm length: 510
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 462

Conread position: 298-773
Cow position:
Alignm length: 488
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 166

Conread position: 298-774
Cow position:
Alignm length: 491
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 23

Conread position: 298-784
Cow position:
Alignm length: 491
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 110

Conread position: 301-586
Cow position:
Alignm length: 303
Alignm identity: 216
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 112, 0

Conread position: 301-757
Cow position:
Alignm length: 462
Alignm identity: 306
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 16, 28

Conread position: 301-771
Cow position:
Alignm length: 485
Alignm identity: 332
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 97, 56

Conread position: 301-772
Cow position:
Alignm length: 485
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 257

Conread position: 301-772
Cow position:
Alignm length: 495
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 172

Conread position: 301-772
Cow position:
Alignm length: 484
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 50

Conread position: 301-772
Cow position:
Alignm length: 482
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 88

Conread position: 301-787
Cow position:
Alignm length: 500
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 30

Conread position: 301-789
Cow position:
Alignm length: 510
Alignm identity: 328
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 38, 26

Conread position: 302-548
Cow position:
Alignm length: 259
Alignm identity: 187
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 18, 167

Conread position: 302-579
Cow position:
Alignm length: 284
Alignm identity: 193
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 46, 26

Conread position: 302-719
Cow position:
Alignm length: 426
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 106

Conread position: 302-761
Cow position:
Alignm length: 466
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 107

Conread position: 302-771
Cow position:
Alignm length: 483
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 30

Conread position: 302-772
Cow position:
Alignm length: 483
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 166

Conread position: 302-787
Cow position:
Alignm length: 505
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 106

Conread position: 303-700
Cow position:
Alignm length: 406
Alignm identity: 278
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 94, 106

Conread position: 305-727
Cow position:
Alignm length: 439
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 90

Conread position: 306-596
Cow position:
Alignm length: 304
Alignm identity: 195
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 104, 243

Conread position: 306-602
Cow position:
Alignm length: 307
Alignm identity: 219
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 129, 58

Conread position: 306-772
Cow position:
Alignm length: 477
Alignm identity: 318
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 185, 127

Conread position: 307-735
Cow position:
Alignm length: 435
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 59

Conread position: 307-772
Cow position:
Alignm length: 483
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 162

Conread position: 307-773
Cow position:
Alignm length: 472
Alignm identity: 298
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 80

Conread position: 310-601
Cow position:
Alignm length: 297
Alignm identity: 202
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 31, 18

Conread position: 310-772
Cow position:
Alignm length: 476
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 241

Conread position: 312-519
Cow position:
Alignm length: 219
Alignm identity: 153
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 102, 9

Conread position: 312-771
Cow position:
Alignm length: 475
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 237

Conread position: 316-771
Cow position:
Alignm length: 471
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 144

Conread position: 317-596
Cow position:
Alignm length: 292
Alignm identity: 203
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 102, 19

Conread position: 318-772
Cow position:
Alignm length: 467
Alignm identity: 289
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 62, 66

Conread position: 319-772
Cow position:
Alignm length: 482
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 248

Conread position: 320-602
Cow position:
Alignm length: 291
Alignm identity: 209
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 111, 88

Conread position: 320-772
Cow position:
Alignm length: 471
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 213

Conread position: 321-772
Cow position:
Alignm length: 470
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 68

Conread position: 328-771
Cow position:
Alignm length: 463
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 39

Conread position: 329-602
Cow position:
Alignm length: 285
Alignm identity: 205
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 91, 142

Conread position: 330-761
Cow position:
Alignm length: 442
Alignm identity: 290
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 86, 49

Conread position: 330-772
Cow position:
Alignm length: 448
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 59

Conread position: 331-602
Cow position:
Alignm length: 277
Alignm identity: 189
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 82, 99

Conread position: 331-779
Cow position:
Alignm length: 460
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 130

Conread position: 332-772
Cow position:
Alignm length: 446
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 76

Conread position: 340-761
Cow position:
Alignm length: 430
Alignm identity: 294
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 78, 68

Conread position: 345-772
Cow position:
Alignm length: 444
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 206

Conread position: 346-784
Cow position:
Alignm length: 453
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 100

Conread position: 370-789
Cow position:
Alignm length: 433
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 21

Conread position: 386-771
Cow position:
Alignm length: 394
Alignm identity: 267
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 29, 130

Conread position: 388-602
Cow position:
Alignm length: 225
Alignm identity: 157
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 43, 27

Conread position: 417-602
Cow position:
Alignm length: 189
Alignm identity: 144
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 32, 134

Conread position: 433-761
Cow position:
Alignm length: 336
Alignm identity: 225
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 200, 29

Conread position: 434-590
Cow position:
Alignm length: 158
Alignm identity: 127
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 47, 16

Conread position: 434-680
Cow position:
Alignm length: 250
Alignm identity: 175
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 57, 114

Conread position: 434-720
Cow position:
Alignm length: 287
Alignm identity: 202
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 55, 0

Conread position: 435-602
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 54, 21

Conread position: 435-772
Cow position:
Alignm length: 342
Alignm identity: 238
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 54, 21

Conread position: 438-583
Cow position:
Alignm length: 154
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 90

Conread position: 438-601
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 438-761
Cow position:
Alignm length: 332
Alignm identity: 243
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 30, 84

Conread position: 438-791
Cow position:
Alignm length: 359
Alignm identity: 252
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 55, 95

Conread position: 473-772
Cow position:
Alignm length: 312
Alignm identity: 230
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 18, 75

Conread position: 482-779
Cow position:
Alignm length: 299
Alignm identity: 210
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 279, 63

Conread position: 521-772
Cow position:
Alignm length: 263
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 213

Conread position: 524-791
Cow position:
Alignm length: 274
Alignm identity: 185
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 126, 78

Conread position: 540-772
Cow position:
Alignm length: 235
Alignm identity: 170
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 117, 64

Conread position: 603-761
Cow position:
Alignm length: 165
Alignm identity: 127
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 72, 47

Conread position: 603-771
Cow position:
Alignm length: 173
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 68, 121

Conread position: 603-773
Cow position:
Alignm length: 179
Alignm identity: 143
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 30, 44

Conread position: 605-772
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 132

Show alignments to all cow chromosomes.