Cow genome map

Conread name: Ss1.1-Pig4-TMW8060D19.3

Conread position: 294-667
Cow position:
Alignm length: 393
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 275

Conread position: 295-772
Cow position:
Alignm length: 492
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 49

Conread position: 296-602
Cow position:
Alignm length: 318
Alignm identity: 224
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 118, 251

Conread position: 296-602
Cow position:
Alignm length: 319
Alignm identity: 228
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 118, 168

Conread position: 296-669
Cow position:
Alignm length: 386
Alignm identity: 270
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 118, 168

Conread position: 296-772
Cow position:
Alignm length: 490
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 32

Conread position: 296-772
Cow position:
Alignm length: 487
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 143

Conread position: 296-772
Cow position:
Alignm length: 490
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 255

Conread position: 297-474
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 115, 171

Conread position: 297-489
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 125, 111

Conread position: 297-515
Cow position:
Alignm length: 222
Alignm identity: 161
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 192, 63

Conread position: 297-519
Cow position:
Alignm length: 232
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 124, 27

Conread position: 297-534
Cow position:
Alignm length: 250
Alignm identity: 187
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 82, 22

Conread position: 297-576
Cow position:
Alignm length: 290
Alignm identity: 211
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 138, 40

Conread position: 297-600
Cow position:
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 31

Conread position: 297-602
Cow position:
Alignm length: 310
Alignm identity: 214
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 141, 116

Conread position: 297-750
Cow position:
Alignm length: 464
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 199

Conread position: 297-761
Cow position:
Alignm length: 474
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 259

Conread position: 297-771
Cow position:
Alignm length: 490
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 31

Conread position: 297-772
Cow position:
Alignm length: 493
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 31

Conread position: 297-772
Cow position:
Alignm length: 485
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 173

Conread position: 297-772
Cow position:
Alignm length: 489
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 116

Conread position: 297-772
Cow position:
Alignm length: 489
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 99

Conread position: 297-772
Cow position:
Alignm length: 490
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 123

Conread position: 297-773
Cow position:
Alignm length: 488
Alignm identity: 332
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 108, 51

Conread position: 297-774
Cow position:
Alignm length: 501
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 14

Conread position: 297-784
Cow position:
Alignm length: 500
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 9

Conread position: 298-585
Cow position:
Alignm length: 299
Alignm identity: 207
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 88, 98

Conread position: 298-680
Cow position:
Alignm length: 392
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 257

Conread position: 298-716
Cow position:
Alignm length: 438
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 325

Conread position: 298-717
Cow position:
Alignm length: 426
Alignm identity: 276
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 115, 220

Conread position: 298-732
Cow position:
Alignm length: 447
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 57

Conread position: 298-760
Cow position:
Alignm length: 490
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 271

Conread position: 298-761
Cow position:
Alignm length: 484
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 30

Conread position: 298-761
Cow position:
Alignm length: 476
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 170

Conread position: 298-761
Cow position:
Alignm length: 477
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 167

Conread position: 298-761
Cow position:
Alignm length: 475
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 58

Conread position: 298-767
Cow position:
Alignm length: 474
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 138

Conread position: 298-770
Cow position:
Alignm length: 495
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 269

Conread position: 298-771
Cow position:
Alignm length: 486
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 40

Conread position: 298-771
Cow position:
Alignm length: 486
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 30

Conread position: 298-771
Cow position:
Alignm length: 485
Alignm identity: 324
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 39, 111

Conread position: 298-772
Cow position:
Alignm length: 512
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 82

Conread position: 298-772
Cow position:
Alignm length: 500
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 281

Conread position: 298-772
Cow position:
Alignm length: 485
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 146

Conread position: 298-772
Cow position:
Alignm length: 493
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 24

Conread position: 298-772
Cow position:
Alignm length: 490
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 262

Conread position: 298-772
Cow position:
Alignm length: 484
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 147

Conread position: 298-772
Cow position:
Alignm length: 495
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 255

Conread position: 298-772
Cow position:
Alignm length: 491
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 230

Conread position: 298-772
Cow position:
Alignm length: 488
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 154

Conread position: 298-772
Cow position:
Alignm length: 484
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 147

Conread position: 298-772
Cow position:
Alignm length: 497
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 259

Conread position: 298-772
Cow position:
Alignm length: 491
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 164

Conread position: 298-779
Cow position:
Alignm length: 491
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 32

Conread position: 299-771
Cow position:
Alignm length: 495
Alignm identity: 329
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 83, 220

Conread position: 299-771
Cow position:
Alignm length: 482
Alignm identity: 315
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 109, 136

Conread position: 301-552
Cow position:
Alignm length: 265
Alignm identity: 176
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 301-741
Cow position:
Alignm length: 453
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 172

Conread position: 301-772
Cow position:
Alignm length: 483
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 312

Conread position: 301-772
Cow position:
Alignm length: 481
Alignm identity: 328
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 115, 184

Conread position: 301-772
Cow position:
Alignm length: 486
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 192

Conread position: 301-774
Cow position:
Alignm length: 488
Alignm identity: 322
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 42, 27

Conread position: 302-602
Cow position:
Alignm length: 305
Alignm identity: 213
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 119, 57

Conread position: 302-772
Cow position:
Alignm length: 491
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 236

Conread position: 302-772
Cow position:
Alignm length: 481
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 60

Conread position: 302-772
Cow position:
Alignm length: 479
Alignm identity: 318
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 122, 34

Conread position: 303-772
Cow position:
Alignm length: 477
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 103

Conread position: 304-596
Cow position:
Alignm length: 300
Alignm identity: 203
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 100, 155

Conread position: 304-609
Cow position:
Alignm length: 311
Alignm identity: 211
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 7, 77

Conread position: 305-601
Cow position:
Alignm length: 310
Alignm identity: 208
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 116, 64

Conread position: 306-586
Cow position:
Alignm length: 290
Alignm identity: 190
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 107, 115

Conread position: 306-599
Cow position:
Alignm length: 298
Alignm identity: 201
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 142, 22

Conread position: 306-643
Cow position:
Alignm length: 349
Alignm identity: 244
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 105, 61

Conread position: 306-772
Cow position:
Alignm length: 480
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 246

Conread position: 310-779
Cow position:
Alignm length: 487
Alignm identity: 308
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 111, 103

Conread position: 311-602
Cow position:
Alignm length: 295
Alignm identity: 207
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 9, 209

Conread position: 312-601
Cow position:
Alignm length: 303
Alignm identity: 213
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 30, 19

Conread position: 312-602
Cow position:
Alignm length: 296
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 25

Conread position: 313-772
Cow position:
Alignm length: 467
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 80

Conread position: 317-519
Cow position:
Alignm length: 208
Alignm identity: 154
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 119, 91

Conread position: 317-772
Cow position:
Alignm length: 470
Alignm identity: 321
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 91, 127

Conread position: 318-771
Cow position:
Alignm length: 457
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 51

Conread position: 319-503
Cow position:
Alignm length: 188
Alignm identity: 137
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 127, 36

Conread position: 319-773
Cow position:
Alignm length: 466
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 5

Conread position: 331-602
Cow position:
Alignm length: 284
Alignm identity: 198
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 99, 75

Conread position: 331-761
Cow position:
Alignm length: 461
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 83

Conread position: 332-772
Cow position:
Alignm length: 455
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 17

Conread position: 340-589
Cow position:
Alignm length: 263
Alignm identity: 190
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 69, 134

Conread position: 340-712
Cow position:
Alignm length: 383
Alignm identity: 261
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 69, 64

Conread position: 343-779
Cow position:
Alignm length: 449
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 214

Conread position: 347-584
Cow position:
Alignm length: 243
Alignm identity: 183
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 91, 66

Conread position: 351-772
Cow position:
Alignm length: 436
Alignm identity: 300
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 58, 117

Conread position: 351-773
Cow position:
Alignm length: 435
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 56

Conread position: 371-720
Cow position:
Alignm length: 362
Alignm identity: 247
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 43, 97

Conread position: 384-718
Cow position:
Alignm length: 345
Alignm identity: 235
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 5, 30

Conread position: 385-784
Cow position:
Alignm length: 407
Alignm identity: 287
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 34, 15

Conread position: 407-601
Cow position:
Alignm length: 203
Alignm identity: 156
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 29, 146

Conread position: 408-770
Cow position:
Alignm length: 371
Alignm identity: 252
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 13, 37

Conread position: 409-771
Cow position:
Alignm length: 371
Alignm identity: 254
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 45

Conread position: 410-772
Cow position:
Alignm length: 375
Alignm identity: 269
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 14, 127

Conread position: 411-759
Cow position:
Alignm length: 360
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 133

Conread position: 430-601
Cow position:
Alignm length: 178
Alignm identity: 138
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 57, 10

Conread position: 432-783
Cow position:
Alignm length: 359
Alignm identity: 240
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 22, 9

Conread position: 434-772
Cow position:
Alignm length: 347
Alignm identity: 250
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 55, 22

Conread position: 435-771
Cow position:
Alignm length: 343
Alignm identity: 242
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 22, 81

Conread position: 438-727
Cow position:
Alignm length: 294
Alignm identity: 207
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 29, 114

Conread position: 438-772
Cow position:
Alignm length: 345
Alignm identity: 247
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 20, 91

Conread position: 441-761
Cow position:
Alignm length: 329
Alignm identity: 228
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 52, 64

Conread position: 442-772
Cow position:
Alignm length: 341
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 109

Conread position: 446-694
Cow position:
Alignm length: 257
Alignm identity: 178
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 103

Conread position: 454-772
Cow position:
Alignm length: 327
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 15

Conread position: 463-772
Cow position:
Alignm length: 317
Alignm identity: 220
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 24, 60

Conread position: 464-772
Cow position:
Alignm length: 316
Alignm identity: 229
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 24, 60

Conread position: 465-770
Cow position:
Alignm length: 310
Alignm identity: 215
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 26, 86

Conread position: 483-602
Cow position:
Alignm length: 120
Alignm identity: 98
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 495-773
Cow position:
Alignm length: 288
Alignm identity: 212
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 64, 34

Conread position: 570-772
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 68, 21

Conread position: 602-792
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 130

Conread position: 603-750
Cow position:
Alignm length: 154
Alignm identity: 120
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 67, 10

Conread position: 603-771
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 131

Conread position: 603-784
Cow position:
Alignm length: 192
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 34, 133

Conread position: 605-769
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 629-772
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 95

Conread position: 632-772
Cow position:
Alignm length: 148
Alignm identity: 117
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 39, 101

Conread position: 640-779
Cow position:
Alignm length: 141
Alignm identity: 112
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 121, 87

Show alignments to all cow chromosomes.