Cow genome map

Conread name: Ss1.1-Pig4-TMW8060D19.3

Conread position: 286-510
Cow position: chr17:12669435-12669202 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 11, 59

Conread position: 294-761
Cow position: chr17:13675291-13674828 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 183

Conread position: 294-772
Cow position: chr17:20099470-20099001 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 114

Conread position: 294-773
Cow position: chr17:4675115-4675580 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 8

Conread position: 296-569
Cow position: chr17:6611488-6611205 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 198
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 118, 255

Conread position: 296-580
Cow position: chr17:31767040-31766744 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 201
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 101, 257

Conread position: 296-602
Cow position: chr17:20390087-20389771 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 255

Conread position: 296-758
Cow position: chr17:14216028-14215565 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 88

Conread position: 296-772
Cow position: chr17:182575-183049 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 254

Conread position: 296-772
Cow position: chr17:3655294-3654813 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 175

Conread position: 296-772
Cow position: chr17:9080422-9079944 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 255

Conread position: 296-772
Cow position: chr17:15142356-15141879 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 255

Conread position: 296-772
Cow position: chr17:15436781-15437260 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 168

Conread position: 296-772
Cow position: chr17:20086765-20086299 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 84

Conread position: 296-772
Cow position: chr17:24783160-24783638 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 88

Conread position: 296-772
Cow position: chr17:27793779-27793307 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 255

Conread position: 296-772
Cow position: chr17:34157119-34157598 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 176

Conread position: 296-772
Cow position: chr17:39049213-39049691 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 255

Conread position: 296-772
Cow position: chr17:43989501-43989978 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 168

Conread position: 296-789
Cow position: chr17:20080871-20080385 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 28

Conread position: 297-551
Cow position: chr17:54445-54182 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 48, 182

Conread position: 297-599
Cow position: chr17:42266417-42266712 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 127, 111

Conread position: 297-602
Cow position: chr17:150884-150577 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 235
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 121, 109

Conread position: 297-718
Cow position: chr17:17067246-17067646 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 282
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 95, 66

Conread position: 297-761
Cow position: chr17:24029002-24028540 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 262

Conread position: 297-772
Cow position: chr17:1786939-1786490 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 0

Conread position: 297-772
Cow position: chr17:4061098-4061580 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 260

Conread position: 297-772
Cow position: chr17:14040040-14039561 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 40

Conread position: 297-772
Cow position: chr17:15372228-15372688 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 336
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 60, 71

Conread position: 297-772
Cow position: chr17:33284833-33284382 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 111

Conread position: 297-779
Cow position: chr17:20403432-20403902 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 83

Conread position: 297-792
Cow position: chr17:8202955-8203433 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 141

Conread position: 298-411
Cow position: chr17:14895175-14895287 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 30

Conread position: 298-535
Cow position: chr17:15324831-15325083 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 187
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 122, 110

Conread position: 298-535
Cow position: chr17:16856517-16856269 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 183
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 115, 0

Conread position: 298-718
Cow position: chr17:4941715-4941304 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 298-718
Cow position: chr17:19020580-19020981 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 110

Conread position: 298-735
Cow position: chr17:19267825-19267396 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 237

Conread position: 298-761
Cow position: chr17:18194808-18195245 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 321
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 116, 173

Conread position: 298-771
Cow position: chr17:6069555-6070018 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 30

Conread position: 298-772
Cow position: chr17:6260862-6261335 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 166

Conread position: 298-772
Cow position: chr17:15851690-15852169 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 262

Conread position: 298-779
Cow position: chr17:2077994-2077510 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 69

Conread position: 301-669
Cow position: chr17:6120720-6121079 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 146

Conread position: 301-761
Cow position: chr17:22558974-22559420 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 107

Conread position: 301-772
Cow position: chr17:2580629-2581098 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 233

Conread position: 301-772
Cow position: chr17:14240504-14240981 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 317

Conread position: 301-772
Cow position: chr17:40805815-40806283 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 27

Conread position: 303-571
Cow position: chr17:1656840-1656570 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 185
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 103, 26

Conread position: 304-748
Cow position: chr17:251159-251587 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 17

Conread position: 304-761
Cow position: chr17:5227635-5228087 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 24

Conread position: 305-600
Cow position: chr17:2031135-2031430 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 208
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 92, 24

Conread position: 306-602
Cow position: chr17:4168192-4168494 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 198
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 87, 264

Conread position: 306-602
Cow position: chr17:32297120-32296816 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 201
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 113, 98

Conread position: 306-716
Cow position: chr17:14296260-14295862 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 288
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 33, 23

Conread position: 306-761
Cow position: chr17:3707768-3707329 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 321
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 126, 23

Conread position: 307-587
Cow position: chr17:31951026-31950735 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 197
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 104, 31

Conread position: 307-601
Cow position: chr17:13695132-13694857 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 209
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 21, 0

Conread position: 307-781
Cow position: chr17:21418583-21419038 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 315
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 113, 108

Conread position: 309-784
Cow position: chr17:239350-239791 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 88

Conread position: 310-473
Cow position: chr17:22133213-22133380 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 108, 21

Conread position: 310-600
Cow position: chr17:20810899-20810606 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 194
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 110, 68

Conread position: 310-748
Cow position: chr17:11783867-11784309 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 244

Conread position: 311-772
Cow position: chr17:4083037-4083495 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 97

Conread position: 312-772
Cow position: chr17:2247071-2246610 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 322
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 101, 25

Conread position: 313-761
Cow position: chr17:19609168-19608744 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 305
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 226, 42

Conread position: 317-709
Cow position: chr17:21769988-21769592 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 270
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 39, 235

Conread position: 317-768
Cow position: chr17:16121533-16121117 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 87

Conread position: 317-772
Cow position: chr17:23323432-23322972 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 234

Conread position: 322-601
Cow position: chr17:2149468-2149740 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 99, 91

Conread position: 331-771
Cow position: chr17:11086692-11086252 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 228

Conread position: 332-773
Cow position: chr17:7942032-7941599 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 282
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 240, 50

Conread position: 334-772
Cow position: chr17:23038618-23039039 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 22

Conread position: 344-518
Cow position: chr17:4208447-4208617 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 36, 40

Conread position: 361-772
Cow position: chr17:14936910-14936495 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 288
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 16, 201

Conread position: 371-773
Cow position: chr17:6000404-6000020 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 267
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 45, 76

Conread position: 407-774
Cow position: chr17:19899137-19899502 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 248
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 15, 140

Conread position: 419-772
Cow position: chr17:3640775-3640429 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 23

Conread position: 432-773
Cow position: chr17:31534009-31534327 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 248
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 59, 24

Conread position: 434-712
Cow position: chr17:2555412-2555142 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 56, 26

Conread position: 434-761
Cow position: chr17:38875638-38875947 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 222
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 174, 65

Conread position: 447-772
Cow position: chr17:28027345-28027028 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 102

Conread position: 457-772
Cow position: chr17:1704037-1704347 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 91

Conread position: 464-772
Cow position: chr17:733170-732866 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 87

Conread position: 467-771
Cow position: chr17:10841941-10842230 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 207
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 219, 29

Conread position: 467-772
Cow position: chr17:22133426-22133742 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 81

Conread position: 532-772
Cow position: chr17:15326525-15326755 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 229, 14

Conread position: 603-772
Cow position: chr17:2263439-2263615 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 145
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 34, 47

Conread position: 603-772
Cow position: chr17:13967225-13967403 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 145
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 132

Conread position: 604-758
Cow position: chr17:3235299-3235443 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 608-772
Cow position: chr17:29302060-29302233 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 26, 121

Show alignments to all cow chromosomes.