Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8060D19.3
        

               Conread position:
               286-510
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               11, 59
               

               Conread position:
               294-761
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 183
               

               Conread position:
               294-772
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 114
               

               Conread position:
               294-773
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 8
               

               Conread position:
               296-569
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               118, 255
               

               Conread position:
               296-580
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               101, 257
               

               Conread position:
               296-602
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 255
               

               Conread position:
               296-758
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 88
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 254
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 175
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 255
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 255
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 168
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 84
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 88
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 255
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 176
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 255
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 168
               

               Conread position:
               296-789
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 28
               

               Conread position:
               297-551
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               48, 182
               

               Conread position:
               297-599
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               127, 111
               

               Conread position:
               297-602
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               235
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               121, 109
               

               Conread position:
               297-718
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               95, 66
               

               Conread position:
               297-761
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 262
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 260
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 40
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               336
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               60, 71
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 111
               

               Conread position:
               297-779
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 83
               

               Conread position:
               297-792
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 141
               

               Conread position:
               298-411
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               82, 30
               

               Conread position:
               298-535
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               122, 110
               

               Conread position:
               298-535
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               298-718
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 30
               

               Conread position:
               298-718
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 110
               

               Conread position:
               298-735
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 237
               

               Conread position:
               298-761
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               321
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               116, 173
               

               Conread position:
               298-771
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 30
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 166
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 262
               

               Conread position:
               298-779
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 69
               

               Conread position:
               301-669
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 146
               

               Conread position:
               301-761
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 107
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 233
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 317
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 27
               

               Conread position:
               303-571
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               103, 26
               

               Conread position:
               304-748
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 17
               

               Conread position:
               304-761
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 24
               

               Conread position:
               305-600
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               92, 24
               

               Conread position:
               306-602
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               87, 264
               

               Conread position:
               306-602
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               113, 98
               

               Conread position:
               306-716
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               288
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               33, 23
               

               Conread position:
               306-761
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               321
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               126, 23
               

               Conread position:
               307-587
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               104, 31
               

               Conread position:
               307-601
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               307-781
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               315
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               113, 108
               

               Conread position:
               309-784
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               236, 88
               

               Conread position:
               310-473
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               108, 21
               

               Conread position:
               310-600
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               110, 68
               

               Conread position:
               310-748
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 244
               

               Conread position:
               311-772
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 97
               

               Conread position:
               312-772
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               322
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               101, 25
               

               Conread position:
               313-761
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               305
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               226, 42
               

               Conread position:
               317-709
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               270
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               39, 235
               

               Conread position:
               317-768
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 87
               

               Conread position:
               317-772
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 234
               

               Conread position:
               322-601
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               210
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               99, 91
               

               Conread position:
               331-771
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 228
               

               Conread position:
               332-773
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               282
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               240, 50
               

               Conread position:
               334-772
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 22
               

               Conread position:
               344-518
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               36, 40
               

               Conread position:
               361-772
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               288
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               16, 201
               

               Conread position:
               371-773
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               45, 76
               

               Conread position:
               407-774
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               248
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               15, 140
               

               Conread position:
               419-772
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 23
               

               Conread position:
               432-773
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               248
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               59, 24
               

               Conread position:
               434-712
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               56, 26
               

               Conread position:
               434-761
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               174, 65
               

               Conread position:
               447-772
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 102
               

               Conread position:
               457-772
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 91
               

               Conread position:
               464-772
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 87
               

               Conread position:
               467-771
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               219, 29
               

               Conread position:
               467-772
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 81
               

               Conread position:
               532-772
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               229, 14
               

               Conread position:
               603-772
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               34, 47
               

               Conread position:
               603-772
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               33, 132
               

               Conread position:
               604-758
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               608-772
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               26, 121
               
Show alignments to all cow chromosomes.