Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8060D19.3
        

               Conread position:
               294-786
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 17
               

               Conread position:
               296-589
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               120, 253
               

               Conread position:
               296-602
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               225
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               113, 256
               

               Conread position:
               296-771
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               328
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               138, 110
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 175
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 232
               

               Conread position:
               297-596
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               121, 67
               

               Conread position:
               297-601
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               118, 24
               

               Conread position:
               297-606
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               124, 72
               

               Conread position:
               297-763
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 55
               

               Conread position:
               298-433
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               298-534
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               138, 101
               

               Conread position:
               298-603
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               72, 76
               

               Conread position:
               298-732
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 259
               

               Conread position:
               298-761
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 30
               

               Conread position:
               298-771
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 193
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 170
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 106
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 30
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 263
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 30
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 230
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 127
               

               Conread position:
               299-601
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               114, 29
               

               Conread position:
               301-580
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               176, 120
               

               Conread position:
               301-599
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               110, 97
               

               Conread position:
               301-599
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               118, 105
               

               Conread position:
               301-683
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 257
               

               Conread position:
               301-747
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 160
               

               Conread position:
               301-761
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 248
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               322
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               117, 58
               

               Conread position:
               301-773
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 127
               

               Conread position:
               302-751
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 112
               

               Conread position:
               304-779
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 225
               

               Conread position:
               305-772
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 17
               

               Conread position:
               306-536
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               306-772
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 74
               

               Conread position:
               307-601
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               38, 21
               

               Conread position:
               307-707
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 151
               

               Conread position:
               307-722
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 175
               

               Conread position:
               307-772
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 89
               

               Conread position:
               307-773
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 21
               

               Conread position:
               307-773
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 22
               

               Conread position:
               307-773
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 249
               

               Conread position:
               308-771
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               330, 105
               

               Conread position:
               311-601
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               23, 17
               

               Conread position:
               311-602
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               74, 105
               

               Conread position:
               312-743
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               14, 90
               

               Conread position:
               333-602
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               99, 75
               

               Conread position:
               335-601
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               86, 78
               

               Conread position:
               340-580
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               81, 73
               

               Conread position:
               349-600
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               31, 35
               

               Conread position:
               350-772
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 208
               

               Conread position:
               362-772
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 194
               

               Conread position:
               371-770
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 186
               

               Conread position:
               382-772
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               289
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               27, 173
               

               Conread position:
               401-602
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               16, 156
               

               Conread position:
               403-779
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               281
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               16, 148
               

               Conread position:
               421-721
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               71, 13
               

               Conread position:
               433-725
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               76, 54
               

               Conread position:
               433-754
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               52, 11
               

               Conread position:
               434-601
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               29, 19
               

               Conread position:
               437-784
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               246
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               43, 13
               

               Conread position:
               450-791
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               41, 70
               

               Conread position:
               467-772
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               203, 15
               

               Conread position:
               504-718
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               166, 41
               

               Conread position:
               509-772
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               128, 30
               

               Conread position:
               572-787
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               99, 21
               

               Conread position:
               603-741
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               35, 135
               

               Conread position:
               603-769
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               44, 134
               

               Conread position:
               604-779
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               26, 131
               

               Conread position:
               607-772
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               31, 130
               
Show alignments to all cow chromosomes.