Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8060D19.3
        

               Conread position:
               290-658
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               228, 123
               

               Conread position:
               294-785
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 114
               

               Conread position:
               296-572
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               67, 158
               

               Conread position:
               296-669
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 255
               

               Conread position:
               296-717
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               287
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               81, 71
               

               Conread position:
               296-761
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 41
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 255
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 67
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               330
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               126, 32
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 168
               

               Conread position:
               297-601
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 245
               

               Conread position:
               297-608
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               232
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               115, 69
               

               Conread position:
               297-700
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               34, 121
               

               Conread position:
               297-744
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 111
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 95
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 118
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 128
               

               Conread position:
               297-779
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 119
               

               Conread position:
               297-780
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 203
               

               Conread position:
               298-532
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               47, 101
               

               Conread position:
               298-673
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               279
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               115, 62
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 235
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 28
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 150
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               463, 118
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 30
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 81
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 178
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 189
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 260
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 261
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 110
               

               Conread position:
               299-771
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               341
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               122, 58
               

               Conread position:
               301-519
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               117, 105
               

               Conread position:
               301-601
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               234
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               32, 26
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 207
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 43
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 235
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 154
               

               Conread position:
               302-571
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               105, 94
               

               Conread position:
               302-753
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               293
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               39, 26
               

               Conread position:
               304-772
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 27
               

               Conread position:
               305-489
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               310-602
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               87, 18
               

               Conread position:
               310-772
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 158
               

               Conread position:
               311-601
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               106, 69
               

               Conread position:
               318-587
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               104, 10
               

               Conread position:
               331-761
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               293
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               49, 56
               

               Conread position:
               332-717
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               267
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               79, 25
               

               Conread position:
               342-772
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 220
               

               Conread position:
               371-772
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 97
               

               Conread position:
               417-769
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               263
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               20, 130
               

               Conread position:
               434-601
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               57, 18
               

               Conread position:
               434-601
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               434-772
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               242
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               56, 109
               

               Conread position:
               441-773
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               52, 29
               

               Conread position:
               442-602
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               457-772
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               32, 63
               

               Conread position:
               603-772
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               15, 53
               

               Conread position:
               603-772
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               35, 46
               
Show alignments to all cow chromosomes.