Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8060D19.3
        

               Conread position:
               292-599
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               233
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               101, 254
               

               Conread position:
               296-534
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               193
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               138, 28
               

               Conread position:
               296-538
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               296-761
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 255
               

               Conread position:
               296-771
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 25
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 41
               

               Conread position:
               297-506
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               161, 107
               

               Conread position:
               297-510
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               172, 12
               

               Conread position:
               297-600
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 109
               

               Conread position:
               297-718
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 58
               

               Conread position:
               297-741
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 111
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 225
               

               Conread position:
               297-785
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               328
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               107, 129
               

               Conread position:
               298-534
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               115, 50
               

               Conread position:
               298-569
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               298-751
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 147
               

               Conread position:
               298-771
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 108
               

               Conread position:
               298-771
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 261
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 259
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 29
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 259
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 264
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 161
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 86
               

               Conread position:
               298-773
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 88
               

               Conread position:
               298-779
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               314
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               39, 44
               

               Conread position:
               299-771
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               335
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               140, 37
               

               Conread position:
               301-586
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               217
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               117, 107
               

               Conread position:
               301-590
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               131, 100
               

               Conread position:
               301-602
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 28
               

               Conread position:
               301-761
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 241
               

               Conread position:
               301-771
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 234
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 21
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 83
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 163
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 61
               

               Conread position:
               301-773
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               329
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               143, 107
               

               Conread position:
               302-611
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               39, 26
               

               Conread position:
               303-574
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               113, 93
               

               Conread position:
               303-772
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 251
               

               Conread position:
               304-718
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               288
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               117, 40
               

               Conread position:
               305-698
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 109
               

               Conread position:
               310-594
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               70, 86
               

               Conread position:
               312-771
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               316
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               61, 102
               

               Conread position:
               312-772
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 10
               

               Conread position:
               318-716
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 95
               

               Conread position:
               318-772
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               326
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               60, 26
               

               Conread position:
               331-771
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 77
               

               Conread position:
               335-685
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               255
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               99, 53
               

               Conread position:
               343-701
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               59, 195
               

               Conread position:
               355-773
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 197
               

               Conread position:
               356-772
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 175
               

               Conread position:
               386-779
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 86
               

               Conread position:
               399-786
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 150
               

               Conread position:
               433-744
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               236, 72
               

               Conread position:
               434-772
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               248
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               56, 181
               

               Conread position:
               462-772
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               30, 80
               

               Conread position:
               465-772
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               25, 84
               

               Conread position:
               543-772
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               141, 61
               

               Conread position:
               605-761
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               33, 47
               

               Conread position:
               605-772
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               29, 130
               

               Conread position:
               605-779
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               36, 129
               

               Conread position:
               607-772
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               29, 129
               

               Conread position:
               620-772
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               21, 85
               
Show alignments to all cow chromosomes.