Cow genome map

Conread name: Ss1.1-Pig4-TMW8060D19.3

Conread position: 282-456
Cow position: chr21:37718636-37718457 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 123, 81

Conread position: 295-601
Cow position: chr21:4716300-4716619 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 225
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 102, 297

Conread position: 296-489
Cow position: chr21:29625434-29625233 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 118, 0

Conread position: 296-519
Cow position: chr21:11452266-11452031 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 169
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 122, 0

Conread position: 296-572
Cow position: chr21:7063788-7064074 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 196
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 118, 255

Conread position: 296-577
Cow position: chr21:40683158-40682868 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 118, 68

Conread position: 296-584
Cow position: chr21:27036113-27035815 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 211
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 118, 255

Conread position: 296-602
Cow position: chr21:44640216-44639911 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 213
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 75, 122

Conread position: 296-761
Cow position: chr21:12054732-12054267 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 72

Conread position: 296-772
Cow position: chr21:5012419-5011948 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 77

Conread position: 296-772
Cow position: chr21:11506897-11507376 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 89

Conread position: 296-772
Cow position: chr21:34822926-34822448 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 255

Conread position: 296-772
Cow position: chr21:37372524-37372988 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 235

Conread position: 297-492
Cow position: chr21:468143-468340 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 121, 111

Conread position: 297-516
Cow position: chr21:9893181-9893406 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 135, 12

Conread position: 297-517
Cow position: chr21:21915975-21916207 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 162
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 297-542
Cow position: chr21:37149326-37149566 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 182
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 133, 31

Conread position: 297-713
Cow position: chr21:4185213-4185614 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 27

Conread position: 297-761
Cow position: chr21:20743324-20742890 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 310
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 122, 29

Conread position: 297-762
Cow position: chr21:28985393-28985846 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 111

Conread position: 297-771
Cow position: chr21:26849731-26849266 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 110

Conread position: 297-772
Cow position: chr21:30360-30801 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 335
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 141, 85

Conread position: 297-772
Cow position: chr21:2712224-2712670 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 43

Conread position: 297-772
Cow position: chr21:27567040-27567507 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 86

Conread position: 297-772
Cow position: chr21:28256712-28257184 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 150

Conread position: 297-772
Cow position: chr21:47942234-47942711 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 29

Conread position: 297-773
Cow position: chr21:36979629-36979138 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 328
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 66, 77

Conread position: 298-531
Cow position: chr21:28998928-28999168 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 168
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 121, 58

Conread position: 298-535
Cow position: chr21:4588689-4588447 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 123, 110

Conread position: 298-614
Cow position: chr21:5839975-5839643 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 236
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 111, 271

Conread position: 298-726
Cow position: chr21:44529619-44530031 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 281
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 147, 53

Conread position: 298-754
Cow position: chr21:29004226-29003790 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 304
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 62, 18

Conread position: 298-755
Cow position: chr21:35145047-35145488 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 86

Conread position: 298-761
Cow position: chr21:27284756-27285211 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 170

Conread position: 298-770
Cow position: chr21:27069673-27069204 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 30

Conread position: 298-771
Cow position: chr21:2417505-2417965 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 18

Conread position: 298-772
Cow position: chr21:147217-147683 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 30

Conread position: 298-772
Cow position: chr21:218315-218770 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 322
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 114, 73

Conread position: 298-772
Cow position: chr21:3780058-3780535 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 170

Conread position: 298-772
Cow position: chr21:10851374-10851839 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 69

Conread position: 298-772
Cow position: chr21:30598192-30597708 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 86

Conread position: 298-772
Cow position: chr21:31515028-31514554 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 259

Conread position: 298-772
Cow position: chr21:33253470-33253943 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 258

Conread position: 298-772
Cow position: chr21:40270384-40269910 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 70

Conread position: 298-772
Cow position: chr21:47646620-47647093 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 30

Conread position: 299-609
Cow position: chr21:45300973-45300671 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 206
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 105, 140

Conread position: 300-771
Cow position: chr21:2539811-2539317 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 44

Conread position: 301-602
Cow position: chr21:1778890-1779192 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 204
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 119, 63

Conread position: 301-761
Cow position: chr21:2512138-2512599 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 250

Conread position: 301-771
Cow position: chr21:21519891-21520364 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 223

Conread position: 301-784
Cow position: chr21:6625814-6626306 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 237

Conread position: 301-791
Cow position: chr21:39426352-39426852 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 259

Conread position: 302-606
Cow position: chr21:3169683-3169982 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 200
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 188, 84

Conread position: 302-761
Cow position: chr21:4181866-4182303 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 313
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 148, 98

Conread position: 304-490
Cow position: chr21:26402195-26402004 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 185

Conread position: 304-770
Cow position: chr21:10567997-10568459 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 167

Conread position: 304-772
Cow position: chr21:1286912-1286453 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 127

Conread position: 304-772
Cow position: chr21:26635860-26635395 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 21

Conread position: 305-602
Cow position: chr21:45115381-45115671 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 201
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 138, 75

Conread position: 306-718
Cow position: chr21:42914660-42915074 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 110

Conread position: 306-780
Cow position: chr21:405827-405388 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 302
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 450, 60

Conread position: 307-538
Cow position: chr21:9930205-9930447 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 108

Conread position: 310-761
Cow position: chr21:45782783-45783220 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 91

Conread position: 311-772
Cow position: chr21:5018445-5018902 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 19

Conread position: 311-772
Cow position: chr21:28736479-28736950 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 17

Conread position: 312-550
Cow position: chr21:34594698-34594462 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 160
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 68, 19

Conread position: 312-581
Cow position: chr21:1075365-1075642 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 188
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 109, 101

Conread position: 312-769
Cow position: chr21:360978-361433 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 14

Conread position: 329-787
Cow position: chr21:49296210-49296641 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 305
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 75, 105

Conread position: 331-715
Cow position: chr21:45786110-45785748 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 267
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 51

Conread position: 332-601
Cow position: chr21:43805207-43804936 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 180
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 67, 54

Conread position: 362-718
Cow position: chr21:25783204-25783568 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 265
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 62, 51

Conread position: 364-772
Cow position: chr21:19612110-19612522 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 183

Conread position: 371-772
Cow position: chr21:4564835-4565223 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 273
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 49, 42

Conread position: 400-718
Cow position: chr21:21943189-21942872 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 215
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 7

Conread position: 404-772
Cow position: chr21:5839786-5839426 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 258
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 7, 22

Conread position: 408-772
Cow position: chr21:468307-468659 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 257
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 83, 52

Conread position: 410-612
Cow position: chr21:2673558-2673362 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 7

Conread position: 412-772
Cow position: chr21:28613732-28614090 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 24

Conread position: 420-772
Cow position: chr21:26836602-26836952 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 40

Conread position: 430-718
Cow position: chr21:31250439-31250712 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 214
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 10, 102

Conread position: 433-784
Cow position: chr21:41404743-41405090 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 226
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 31, 110

Conread position: 434-772
Cow position: chr21:13298032-13298355 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 17

Conread position: 434-772
Cow position: chr21:38801866-38802199 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 110

Conread position: 438-772
Cow position: chr21:2880385-2880063 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 28

Conread position: 443-781
Cow position: chr21:21024909-21025227 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 237
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 41, 10

Conread position: 445-769
Cow position: chr21:24085360-24085044 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 224
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 12, 102

Conread position: 451-772
Cow position: chr21:34655287-34655590 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 45

Conread position: 464-761
Cow position: chr21:30563135-30563420 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 215
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 27, 7

Conread position: 497-772
Cow position: chr21:9893464-9893731 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 213
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 140, 24

Conread position: 501-772
Cow position: chr21:6414524-6414262 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 260, 44

Conread position: 603-772
Cow position: chr21:33710733-33710911 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 145
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 33, 134

Conread position: 603-778
Cow position: chr21:997252-997080 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 68, 36

Show alignments to all cow chromosomes.