Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8060D19.3
        

               Conread position:
               282-456
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               123, 81
               

               Conread position:
               295-601
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               225
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               102, 297
               

               Conread position:
               296-489
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               296-519
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               296-572
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               118, 255
               

               Conread position:
               296-577
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               118, 68
               

               Conread position:
               296-584
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               118, 255
               

               Conread position:
               296-602
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               75, 122
               

               Conread position:
               296-761
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 72
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 77
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 89
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 255
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 235
               

               Conread position:
               297-492
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               121, 111
               

               Conread position:
               297-516
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               135, 12
               

               Conread position:
               297-517
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               297-542
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               133, 31
               

               Conread position:
               297-713
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 27
               

               Conread position:
               297-761
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               310
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               122, 29
               

               Conread position:
               297-762
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 111
               

               Conread position:
               297-771
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 110
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               335
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               141, 85
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 43
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 86
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 150
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 29
               

               Conread position:
               297-773
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               328
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               66, 77
               

               Conread position:
               298-531
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               121, 58
               

               Conread position:
               298-535
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               123, 110
               

               Conread position:
               298-614
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               236
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               111, 271
               

               Conread position:
               298-726
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               281
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               147, 53
               

               Conread position:
               298-754
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               304
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               62, 18
               

               Conread position:
               298-755
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 86
               

               Conread position:
               298-761
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 170
               

               Conread position:
               298-770
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 30
               

               Conread position:
               298-771
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 18
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 30
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               322
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               114, 73
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 170
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 69
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 86
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 259
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 258
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 70
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 30
               

               Conread position:
               299-609
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               105, 140
               

               Conread position:
               300-771
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 44
               

               Conread position:
               301-602
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               119, 63
               

               Conread position:
               301-761
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 250
               

               Conread position:
               301-771
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 223
               

               Conread position:
               301-784
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 237
               

               Conread position:
               301-791
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 259
               

               Conread position:
               302-606
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               188, 84
               

               Conread position:
               302-761
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               313
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               148, 98
               

               Conread position:
               304-490
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               44, 185
               

               Conread position:
               304-770
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 167
               

               Conread position:
               304-772
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 127
               

               Conread position:
               304-772
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 21
               

               Conread position:
               305-602
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               138, 75
               

               Conread position:
               306-718
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 110
               

               Conread position:
               306-780
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               302
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               450, 60
               

               Conread position:
               307-538
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               16, 108
               

               Conread position:
               310-761
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 91
               

               Conread position:
               311-772
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 19
               

               Conread position:
               311-772
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 17
               

               Conread position:
               312-550
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               68, 19
               

               Conread position:
               312-581
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               109, 101
               

               Conread position:
               312-769
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 14
               

               Conread position:
               329-787
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               305
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               75, 105
               

               Conread position:
               331-715
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 51
               

               Conread position:
               332-601
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               67, 54
               

               Conread position:
               362-718
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               265
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               62, 51
               

               Conread position:
               364-772
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 183
               

               Conread position:
               371-772
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               49, 42
               

               Conread position:
               400-718
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               46, 7
               

               Conread position:
               404-772
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               7, 22
               

               Conread position:
               408-772
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               257
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               83, 52
               

               Conread position:
               410-612
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               20, 7
               

               Conread position:
               412-772
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 24
               

               Conread position:
               420-772
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 40
               

               Conread position:
               430-718
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               10, 102
               

               Conread position:
               433-784
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               31, 110
               

               Conread position:
               434-772
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 17
               

               Conread position:
               434-772
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 110
               

               Conread position:
               438-772
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 28
               

               Conread position:
               443-781
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               41, 10
               

               Conread position:
               445-769
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               12, 102
               

               Conread position:
               451-772
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 45
               

               Conread position:
               464-761
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               215
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               497-772
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               140, 24
               

               Conread position:
               501-772
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               260, 44
               

               Conread position:
               603-772
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               33, 134
               

               Conread position:
               603-778
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               68, 36
               
Show alignments to all cow chromosomes.