Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8060D19.3
        

               Conread position:
               292-601
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               49, 7
               

               Conread position:
               294-792
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               330
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               39, 34
               

               Conread position:
               296-515
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               118, 168
               

               Conread position:
               296-669
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               270
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               78, 68
               

               Conread position:
               296-761
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 32
               

               Conread position:
               296-768
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 248
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 118
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 71
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 168
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 108
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 162
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               334
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               342, 119
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 68
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 173
               

               Conread position:
               296-773
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 67
               

               Conread position:
               297-568
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               100, 170
               

               Conread position:
               297-590
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               76, 59
               

               Conread position:
               297-716
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 34
               

               Conread position:
               297-729
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 59
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 87
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 40
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 259
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 161
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 171
               

               Conread position:
               297-773
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               322
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               40, 113
               

               Conread position:
               297-786
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 40
               

               Conread position:
               297-788
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               330
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               124, 24
               

               Conread position:
               298-580
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 110
               

               Conread position:
               298-602
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               223
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               43, 39
               

               Conread position:
               298-761
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 203
               

               Conread position:
               298-771
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 173
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 86
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 170
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 30
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 260
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 163
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 73
               

               Conread position:
               298-779
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 229
               

               Conread position:
               298-784
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 32
               

               Conread position:
               299-772
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 252
               

               Conread position:
               301-585
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               149, 21
               

               Conread position:
               301-601
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               38, 27
               

               Conread position:
               301-601
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 26
               

               Conread position:
               301-602
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               113, 55
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 257
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 107
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 167
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 105
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 107
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 63
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 252
               

               Conread position:
               301-779
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 72
               

               Conread position:
               301-779
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 250
               

               Conread position:
               302-772
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 249
               

               Conread position:
               303-601
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               105, 128
               

               Conread position:
               304-515
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               132, 104
               

               Conread position:
               304-772
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 247
               

               Conread position:
               305-772
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 102
               

               Conread position:
               306-769
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 70
               

               Conread position:
               307-538
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               73, 48
               

               Conread position:
               307-772
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 157
               

               Conread position:
               307-772
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 161
               

               Conread position:
               307-772
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 67
               

               Conread position:
               310-599
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               111, 103
               

               Conread position:
               311-580
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               59, 105
               

               Conread position:
               312-743
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               306
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               29, 89
               

               Conread position:
               312-772
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 49
               

               Conread position:
               313-772
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 157
               

               Conread position:
               328-772
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 88
               

               Conread position:
               330-772
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 73
               

               Conread position:
               331-601
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               84, 35
               

               Conread position:
               331-772
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               429, 32
               

               Conread position:
               332-711
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               267
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               104, 14
               

               Conread position:
               333-578
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               88, 64
               

               Conread position:
               333-748
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               276
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               130, 34
               

               Conread position:
               335-493
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               83, 73
               

               Conread position:
               382-772
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 89
               

               Conread position:
               384-791
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 126
               

               Conread position:
               400-772
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 45
               

               Conread position:
               429-791
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               263
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               60, 5
               

               Conread position:
               434-780
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               37, 16
               

               Conread position:
               437-716
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               216
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               12, 116
               

               Conread position:
               437-769
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               52, 107
               

               Conread position:
               438-772
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 115
               

               Conread position:
               438-772
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 51
               

               Conread position:
               438-772
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               240
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               53, 73
               

               Conread position:
               438-773
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               249
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               15, 79
               

               Conread position:
               446-772
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 97
               

               Conread position:
               450-771
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               43, 75
               

               Conread position:
               454-598
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               9, 96
               

               Conread position:
               454-769
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               37, 6
               

               Conread position:
               497-755
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               223, 48
               

               Conread position:
               500-772
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               45, 105
               

               Conread position:
               550-785
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               211, 61
               

               Conread position:
               558-776
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               573-772
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               64, 29
               

               Conread position:
               603-772
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               38, 131
               

               Conread position:
               620-772
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               26, 95
               

               Conread position:
               620-772
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               16, 117
               

               Conread position:
               629-784
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               632-772
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               21, 99
               

               Conread position:
               639-772
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               32, 8
               
Show alignments to all cow chromosomes.