Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8060D19.3
        

               Conread position:
               283-772
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 132
               

               Conread position:
               292-718
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 121
               

               Conread position:
               296-589
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               118, 255
               

               Conread position:
               296-609
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               296-752
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 239
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 257
               

               Conread position:
               297-538
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               122, 89
               

               Conread position:
               297-583
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               98, 54
               

               Conread position:
               297-601
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               216
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               141, 118
               

               Conread position:
               297-601
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               227
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               21, 236
               

               Conread position:
               297-716
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 31
               

               Conread position:
               297-770
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 260
               

               Conread position:
               297-771
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 111
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 40
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 24
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 87
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 111
               

               Conread position:
               297-773
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 145
               

               Conread position:
               298-535
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               115, 158
               

               Conread position:
               298-574
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               112, 70
               

               Conread position:
               298-602
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               231
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               115, 30
               

               Conread position:
               298-704
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               120, 110
               

               Conread position:
               298-732
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 232
               

               Conread position:
               298-757
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 259
               

               Conread position:
               298-761
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 30
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 267
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 146
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 259
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 256
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 42
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 63
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 62
               

               Conread position:
               298-784
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 23
               

               Conread position:
               299-552
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               81, 85
               

               Conread position:
               301-580
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               117, 107
               

               Conread position:
               301-597
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               103, 192
               

               Conread position:
               301-770
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 105
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               306
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               87, 36
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 36
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 248
               

               Conread position:
               302-602
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               226
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               134, 101
               

               Conread position:
               304-761
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 238
               

               Conread position:
               304-772
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 17
               

               Conread position:
               304-779
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 132
               

               Conread position:
               305-601
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 58
               

               Conread position:
               306-537
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               160, 108
               

               Conread position:
               306-772
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 34
               

               Conread position:
               307-772
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 57
               

               Conread position:
               310-772
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 100
               

               Conread position:
               310-779
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 98
               

               Conread position:
               330-770
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 41
               

               Conread position:
               331-602
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               87, 104
               

               Conread position:
               331-772
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 225
               

               Conread position:
               332-600
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               133, 112
               

               Conread position:
               332-784
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 6
               

               Conread position:
               333-771
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 289
               

               Conread position:
               344-773
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               284
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               46, 29
               

               Conread position:
               362-772
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 173
               

               Conread position:
               400-599
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               9, 42
               

               Conread position:
               434-758
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 16
               

               Conread position:
               434-761
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               233
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               54, 32
               

               Conread position:
               434-772
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 114
               

               Conread position:
               434-772
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 112
               

               Conread position:
               468-774
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               17, 75
               

               Conread position:
               529-772
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               232, 19
               

               Conread position:
               529-772
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               128, 19
               

               Conread position:
               532-771
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               126, 72
               

               Conread position:
               603-761
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               35, 127
               

               Conread position:
               603-761
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               72, 35
               

               Conread position:
               603-772
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               35, 49
               

               Conread position:
               603-772
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               33, 132
               

               Conread position:
               604-717
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               34, 59
               

               Conread position:
               604-772
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               32, 124
               

               Conread position:
               604-772
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               126, 58
               

               Conread position:
               608-772
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               35, 129
               

               Conread position:
               623-772
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               15, 29
               

               Conread position:
               623-775
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               52, 24
               

               Conread position:
               647-772
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               114, 73
               
Show alignments to all cow chromosomes.