Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8060D19.3
        

               Conread position:
               294-784
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 12
               

               Conread position:
               296-489
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               118, 193
               

               Conread position:
               296-508
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               134, 118
               

               Conread position:
               296-667
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               118, 168
               

               Conread position:
               296-769
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 140
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 239
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 168
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 255
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 255
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 67
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 255
               

               Conread position:
               296-786
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 25
               

               Conread position:
               297-493
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               124, 98
               

               Conread position:
               297-552
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 117
               

               Conread position:
               297-580
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               122, 32
               

               Conread position:
               297-599
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               297-602
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               196, 108
               

               Conread position:
               297-760
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 22
               

               Conread position:
               297-761
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               303
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               74, 86
               

               Conread position:
               297-770
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 235
               

               Conread position:
               297-771
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               328
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               130, 25
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 148
               

               Conread position:
               297-784
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               329
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               37, 8
               

               Conread position:
               298-508
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               39, 164
               

               Conread position:
               298-577
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 110
               

               Conread position:
               298-718
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               304
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               137, 48
               

               Conread position:
               298-745
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               305
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               115, 183
               

               Conread position:
               298-757
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               327
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               114, 272
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 168
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 110
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 32
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 170
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 266
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 260
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 29
               

               Conread position:
               299-601
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 56
               

               Conread position:
               301-580
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               115, 97
               

               Conread position:
               301-711
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               276
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               40, 20
               

               Conread position:
               301-718
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 250
               

               Conread position:
               301-768
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 30
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 54
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 21
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 83
               

               Conread position:
               301-779
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 27
               

               Conread position:
               302-599
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               39, 19
               

               Conread position:
               302-643
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               234
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               39, 26
               

               Conread position:
               302-772
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 36
               

               Conread position:
               302-773
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 78
               

               Conread position:
               304-718
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 247
               

               Conread position:
               304-772
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 308
               

               Conread position:
               305-601
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               104, 68
               

               Conread position:
               306-720
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 239
               

               Conread position:
               306-771
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               318
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               35, 31
               

               Conread position:
               306-773
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               316
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               187, 32
               

               Conread position:
               307-772
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 262
               

               Conread position:
               310-556
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               127, 0
               

               Conread position:
               310-772
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 243
               

               Conread position:
               310-772
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 74
               

               Conread position:
               311-599
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               30, 17
               

               Conread position:
               311-609
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               102, 152
               

               Conread position:
               316-762
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               302
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               132, 99
               

               Conread position:
               317-772
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 67
               

               Conread position:
               317-772
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 250
               

               Conread position:
               317-791
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 67
               

               Conread position:
               325-719
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 27
               

               Conread position:
               330-772
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 224
               

               Conread position:
               331-542
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               80, 160
               

               Conread position:
               332-792
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               299
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               65, 35
               

               Conread position:
               340-771
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               289
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               76, 117
               

               Conread position:
               344-788
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               304
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               69, 168
               

               Conread position:
               358-772
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 201
               

               Conread position:
               366-718
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               68, 21
               

               Conread position:
               368-772
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               280
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               74, 48
               

               Conread position:
               399-772
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               280
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               21, 141
               

               Conread position:
               434-602
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               434-772
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 22
               

               Conread position:
               438-772
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 82
               

               Conread position:
               440-771
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               51, 80
               

               Conread position:
               442-772
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               233
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               49, 105
               

               Conread position:
               451-772
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               229
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               10, 98
               

               Conread position:
               459-709
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               32, 90
               

               Conread position:
               483-772
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               39, 47
               

               Conread position:
               603-761
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               67, 130
               

               Conread position:
               603-771
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 124
               

               Conread position:
               603-771
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               30, 49
               

               Conread position:
               603-772
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               33, 132
               

               Conread position:
               603-773
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               63, 17
               

               Conread position:
               603-783
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               27, 108
               
Show alignments to all cow chromosomes.