Cow genome map

Conread name: Ss1.1-Pig4-TMW8060D19.3

Conread position: 294-784
Cow position: chr24:38638734-38639207 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 12

Conread position: 296-489
Cow position: chr24:30430814-30431014 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 118, 193

Conread position: 296-508
Cow position: chr24:6085262-6085476 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 134, 118

Conread position: 296-667
Cow position: chr24:29305114-29304746 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 267
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 118, 168

Conread position: 296-769
Cow position: chr24:12699618-12699150 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 140

Conread position: 296-772
Cow position: chr24:5992026-5991549 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 239

Conread position: 296-772
Cow position: chr24:6435682-6436160 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 168

Conread position: 296-772
Cow position: chr24:7062741-7063217 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 255

Conread position: 296-772
Cow position: chr24:11152038-11151560 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 255

Conread position: 296-772
Cow position: chr24:17321913-17322368 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 67

Conread position: 296-772
Cow position: chr24:44018707-44019185 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 255

Conread position: 296-786
Cow position: chr24:35869355-35868894 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 25

Conread position: 297-493
Cow position: chr24:8151086-8150883 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 124, 98

Conread position: 297-552
Cow position: chr24:7089767-7089504 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 117

Conread position: 297-580
Cow position: chr24:6060398-6060685 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 122, 32

Conread position: 297-599
Cow position: chr24:17370772-17370484 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 210
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 116, 0

Conread position: 297-602
Cow position: chr24:35840862-35840566 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 216
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 196, 108

Conread position: 297-760
Cow position: chr24:19640884-19641374 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 22

Conread position: 297-761
Cow position: chr24:17409680-17410121 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 303
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 74, 86

Conread position: 297-770
Cow position: chr24:33934589-33935062 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 235

Conread position: 297-771
Cow position: chr24:14871116-14870659 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 328
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 130, 25

Conread position: 297-772
Cow position: chr24:6130027-6130485 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 148

Conread position: 297-784
Cow position: chr24:40470167-40469682 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 329
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 37, 8

Conread position: 298-508
Cow position: chr24:36709781-36710005 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 172
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 39, 164

Conread position: 298-577
Cow position: chr24:36558564-36558289 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 110

Conread position: 298-718
Cow position: chr24:14278012-14277605 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 304
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 137, 48

Conread position: 298-745
Cow position: chr24:17300700-17300271 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 305
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 115, 183

Conread position: 298-757
Cow position: chr24:12334555-12334070 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 327
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 114, 272

Conread position: 298-772
Cow position: chr24:147408-146935 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 168

Conread position: 298-772
Cow position: chr24:6337590-6338058 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 110

Conread position: 298-772
Cow position: chr24:6407239-6407709 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 32

Conread position: 298-772
Cow position: chr24:12087410-12087876 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 170

Conread position: 298-772
Cow position: chr24:19834598-19835083 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 266

Conread position: 298-772
Cow position: chr24:29188494-29188963 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 260

Conread position: 298-772
Cow position: chr24:40101692-40101240 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 29

Conread position: 299-601
Cow position: chr24:1450631-1450919 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 56

Conread position: 301-580
Cow position: chr24:36480750-36480476 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 185
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 115, 97

Conread position: 301-711
Cow position: chr24:9435734-9435324 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 276
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 40, 20

Conread position: 301-718
Cow position: chr24:13233462-13233882 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 250

Conread position: 301-768
Cow position: chr24:14389328-14388872 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 30

Conread position: 301-772
Cow position: chr24:6142291-6142746 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 54

Conread position: 301-772
Cow position: chr24:12238497-12238961 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 21

Conread position: 301-772
Cow position: chr24:22972297-22972741 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 83

Conread position: 301-779
Cow position: chr24:19702705-19703169 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 27

Conread position: 302-599
Cow position: chr24:29706564-29706869 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 209
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 39, 19

Conread position: 302-643
Cow position: chr24:6064553-6064231 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 234
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 39, 26

Conread position: 302-772
Cow position: chr24:13179809-13179345 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 36

Conread position: 302-773
Cow position: chr24:6353350-6353811 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 78

Conread position: 304-718
Cow position: chr24:9187535-9187118 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 247

Conread position: 304-772
Cow position: chr24:12150104-12149618 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 308

Conread position: 305-601
Cow position: chr24:29408495-29408187 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 201
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 104, 68

Conread position: 306-720
Cow position: chr24:12163154-12163560 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 239

Conread position: 306-771
Cow position: chr24:6659287-6658819 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 318
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 35, 31

Conread position: 306-773
Cow position: chr24:37199680-37199237 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 316
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 187, 32

Conread position: 307-772
Cow position: chr24:13044431-13043951 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 262

Conread position: 310-556
Cow position: chr24:6668604-6668354 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 139
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 127, 0

Conread position: 310-772
Cow position: chr24:23504649-23504183 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 243

Conread position: 310-772
Cow position: chr24:38585906-38585458 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 74

Conread position: 311-599
Cow position: chr24:37320377-37320097 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 17

Conread position: 311-609
Cow position: chr24:5888035-5887733 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 209
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 102, 152

Conread position: 316-762
Cow position: chr24:13189406-13189838 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 302
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 132, 99

Conread position: 317-772
Cow position: chr24:9090831-9090381 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 67

Conread position: 317-772
Cow position: chr24:16561104-16560642 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 250

Conread position: 317-791
Cow position: chr24:4414313-4413852 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 67

Conread position: 325-719
Cow position: chr24:25437523-25437903 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 27

Conread position: 330-772
Cow position: chr24:14383400-14382952 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 224

Conread position: 331-542
Cow position: chr24:34493947-34493731 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 160

Conread position: 332-792
Cow position: chr24:5942928-5943369 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 299
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 35

Conread position: 340-771
Cow position: chr24:36298680-36299082 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 289
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 76, 117

Conread position: 344-788
Cow position: chr24:16097774-16098215 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 304
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 69, 168

Conread position: 358-772
Cow position: chr24:9545316-9545731 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 201

Conread position: 366-718
Cow position: chr24:32847299-32847638 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 252
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 68, 21

Conread position: 368-772
Cow position: chr24:12205060-12204667 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 280
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 74, 48

Conread position: 399-772
Cow position: chr24:12127811-12127434 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 280
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 21, 141

Conread position: 434-602
Cow position: chr24:10222824-10222659 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 139
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 53, 0

Conread position: 434-772
Cow position: chr24:310212-310544 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 22

Conread position: 438-772
Cow position: chr24:8606166-8606497 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 82

Conread position: 440-771
Cow position: chr24:6323999-6323675 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 241
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 51, 80

Conread position: 442-772
Cow position: chr24:6023734-6023411 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 233
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 49, 105

Conread position: 451-772
Cow position: chr24:16083420-16083104 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 229
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 10, 98

Conread position: 459-709
Cow position: chr24:40468422-40468662 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 32, 90

Conread position: 483-772
Cow position: chr24:14755395-14755675 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 202
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 39, 47

Conread position: 603-761
Cow position: chr24:36723322-36723484 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 67, 130

Conread position: 603-771
Cow position: chr24:6036488-6036664 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 124

Conread position: 603-771
Cow position: chr24:41003985-41004162 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 49

Conread position: 603-772
Cow position: chr24:6963252-6963074 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 33, 132

Conread position: 603-773
Cow position: chr24:6668245-6668082 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 1e-20
Alignm gaps (pig, cow): 63, 17

Conread position: 603-783
Cow position: chr24:12569523-12569705 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 27, 108

Show alignments to all cow chromosomes.