Cow genome map
Conread name: | Ss1.1-Pig4-TMW8060D19.3 |
Conread position: | 294-784 |
Cow position: | chr24:38638734-38639207 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 197, 12 |
Conread position: | 296-489 |
Cow position: | chr24:30430814-30431014 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 139 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 118, 193 |
Conread position: | 296-508 |
Cow position: | chr24:6085262-6085476 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 153 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 134, 118 |
Conread position: | 296-667 |
Cow position: | chr24:29305114-29304746 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 267 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 118, 168 |
Conread position: | 296-769 |
Cow position: | chr24:12699618-12699150 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 124, 140 |
Conread position: | 296-772 |
Cow position: | chr24:5992026-5991549 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 239 |
Conread position: | 296-772 |
Cow position: | chr24:6435682-6436160 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 168 |
Conread position: | 296-772 |
Cow position: | chr24:7062741-7063217 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 255 |
Conread position: | 296-772 |
Cow position: | chr24:11152038-11151560 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 113, 255 |
Conread position: | 296-772 |
Cow position: | chr24:17321913-17322368 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 67 |
Conread position: | 296-772 |
Cow position: | chr24:44018707-44019185 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 255 |
Conread position: | 296-786 |
Cow position: | chr24:35869355-35868894 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 25 |
Conread position: | 297-493 |
Cow position: | chr24:8151086-8150883 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 148 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 124, 98 |
Conread position: | 297-552 |
Cow position: | chr24:7089767-7089504 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 117 |
Conread position: | 297-580 |
Cow position: | chr24:6060398-6060685 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 198 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 122, 32 |
Conread position: | 297-599 |
Cow position: | chr24:17370772-17370484 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 210 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 116, 0 |
Conread position: | 297-602 |
Cow position: | chr24:35840862-35840566 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 216 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 196, 108 |
Conread position: | 297-760 |
Cow position: | chr24:19640884-19641374 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 126, 22 |
Conread position: | 297-761 |
Cow position: | chr24:17409680-17410121 (view UCSC Genome Browser custom track) |
Alignm length: | 469 |
Alignm identity: | 303 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 74, 86 |
Conread position: | 297-770 |
Cow position: | chr24:33934589-33935062 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 235 |
Conread position: | 297-771 |
Cow position: | chr24:14871116-14870659 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 328 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 130, 25 |
Conread position: | 297-772 |
Cow position: | chr24:6130027-6130485 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 148 |
Conread position: | 297-784 |
Cow position: | chr24:40470167-40469682 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 329 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 37, 8 |
Conread position: | 298-508 |
Cow position: | chr24:36709781-36710005 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 172 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 39, 164 |
Conread position: | 298-577 |
Cow position: | chr24:36558564-36558289 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 110 |
Conread position: | 298-718 |
Cow position: | chr24:14278012-14277605 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 304 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 137, 48 |
Conread position: | 298-745 |
Cow position: | chr24:17300700-17300271 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 305 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 115, 183 |
Conread position: | 298-757 |
Cow position: | chr24:12334555-12334070 (view UCSC Genome Browser custom track) |
Alignm length: | 489 |
Alignm identity: | 327 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 114, 272 |
Conread position: | 298-772 |
Cow position: | chr24:147408-146935 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 111, 168 |
Conread position: | 298-772 |
Cow position: | chr24:6337590-6338058 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 110 |
Conread position: | 298-772 |
Cow position: | chr24:6407239-6407709 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 32 |
Conread position: | 298-772 |
Cow position: | chr24:12087410-12087876 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 170 |
Conread position: | 298-772 |
Cow position: | chr24:19834598-19835083 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 266 |
Conread position: | 298-772 |
Cow position: | chr24:29188494-29188963 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 260 |
Conread position: | 298-772 |
Cow position: | chr24:40101692-40101240 (view UCSC Genome Browser custom track) |
Alignm length: | 482 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 29 |
Conread position: | 299-601 |
Cow position: | chr24:1450631-1450919 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 137, 56 |
Conread position: | 301-580 |
Cow position: | chr24:36480750-36480476 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 185 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 115, 97 |
Conread position: | 301-711 |
Cow position: | chr24:9435734-9435324 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 276 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 40, 20 |
Conread position: | 301-718 |
Cow position: | chr24:13233462-13233882 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 250 |
Conread position: | 301-768 |
Cow position: | chr24:14389328-14388872 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 122, 30 |
Conread position: | 301-772 |
Cow position: | chr24:6142291-6142746 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 138, 54 |
Conread position: | 301-772 |
Cow position: | chr24:12238497-12238961 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 118, 21 |
Conread position: | 301-772 |
Cow position: | chr24:22972297-22972741 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 83 |
Conread position: | 301-779 |
Cow position: | chr24:19702705-19703169 (view UCSC Genome Browser custom track) |
Alignm length: | 488 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 27 |
Conread position: | 302-599 |
Cow position: | chr24:29706564-29706869 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 209 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 39, 19 |
Conread position: | 302-643 |
Cow position: | chr24:6064553-6064231 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 234 |
Alignm E-value: | 9e-30 |
Alignm gaps (pig, cow): | 39, 26 |
Conread position: | 302-772 |
Cow position: | chr24:13179809-13179345 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 77, 36 |
Conread position: | 302-773 |
Cow position: | chr24:6353350-6353811 (view UCSC Genome Browser custom track) |
Alignm length: | 476 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 78 |
Conread position: | 304-718 |
Cow position: | chr24:9187535-9187118 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 110, 247 |
Conread position: | 304-772 |
Cow position: | chr24:12150104-12149618 (view UCSC Genome Browser custom track) |
Alignm length: | 504 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 308 |
Conread position: | 305-601 |
Cow position: | chr24:29408495-29408187 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 201 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 104, 68 |
Conread position: | 306-720 |
Cow position: | chr24:12163154-12163560 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 114, 239 |
Conread position: | 306-771 |
Cow position: | chr24:6659287-6658819 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 318 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 35, 31 |
Conread position: | 306-773 |
Cow position: | chr24:37199680-37199237 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 316 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 187, 32 |
Conread position: | 307-772 |
Cow position: | chr24:13044431-13043951 (view UCSC Genome Browser custom track) |
Alignm length: | 491 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 262 |
Conread position: | 310-556 |
Cow position: | chr24:6668604-6668354 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 139 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 127, 0 |
Conread position: | 310-772 |
Cow position: | chr24:23504649-23504183 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 104, 243 |
Conread position: | 310-772 |
Cow position: | chr24:38585906-38585458 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 74 |
Conread position: | 311-599 |
Cow position: | chr24:37320377-37320097 (view UCSC Genome Browser custom track) |
Alignm length: | 296 |
Alignm identity: | 203 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 30, 17 |
Conread position: | 311-609 |
Cow position: | chr24:5888035-5887733 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 209 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 102, 152 |
Conread position: | 316-762 |
Cow position: | chr24:13189406-13189838 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 302 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 132, 99 |
Conread position: | 317-772 |
Cow position: | chr24:9090831-9090381 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 67 |
Conread position: | 317-772 |
Cow position: | chr24:16561104-16560642 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 96, 250 |
Conread position: | 317-791 |
Cow position: | chr24:4414313-4413852 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 67 |
Conread position: | 325-719 |
Cow position: | chr24:25437523-25437903 (view UCSC Genome Browser custom track) |
Alignm length: | 406 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 27 |
Conread position: | 330-772 |
Cow position: | chr24:14383400-14382952 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 224 |
Conread position: | 331-542 |
Cow position: | chr24:34493947-34493731 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 157 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 80, 160 |
Conread position: | 332-792 |
Cow position: | chr24:5942928-5943369 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 299 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 65, 35 |
Conread position: | 340-771 |
Cow position: | chr24:36298680-36299082 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 289 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 76, 117 |
Conread position: | 344-788 |
Cow position: | chr24:16097774-16098215 (view UCSC Genome Browser custom track) |
Alignm length: | 456 |
Alignm identity: | 304 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 69, 168 |
Conread position: | 358-772 |
Cow position: | chr24:9545316-9545731 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 201 |
Conread position: | 366-718 |
Cow position: | chr24:32847299-32847638 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 252 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 68, 21 |
Conread position: | 368-772 |
Cow position: | chr24:12205060-12204667 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 280 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 74, 48 |
Conread position: | 399-772 |
Cow position: | chr24:12127811-12127434 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 280 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 21, 141 |
Conread position: | 434-602 |
Cow position: | chr24:10222824-10222659 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 139 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 434-772 |
Cow position: | chr24:310212-310544 (view UCSC Genome Browser custom track) |
Alignm length: | 344 |
Alignm identity: | 248 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 38, 22 |
Conread position: | 438-772 |
Cow position: | chr24:8606166-8606497 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 244 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 82 |
Conread position: | 440-771 |
Cow position: | chr24:6323999-6323675 (view UCSC Genome Browser custom track) |
Alignm length: | 342 |
Alignm identity: | 241 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 51, 80 |
Conread position: | 442-772 |
Cow position: | chr24:6023734-6023411 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 233 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 49, 105 |
Conread position: | 451-772 |
Cow position: | chr24:16083420-16083104 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 229 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 10, 98 |
Conread position: | 459-709 |
Cow position: | chr24:40468422-40468662 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 178 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 32, 90 |
Conread position: | 483-772 |
Cow position: | chr24:14755395-14755675 (view UCSC Genome Browser custom track) |
Alignm length: | 292 |
Alignm identity: | 202 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 39, 47 |
Conread position: | 603-761 |
Cow position: | chr24:36723322-36723484 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 123 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 67, 130 |
Conread position: | 603-771 |
Cow position: | chr24:6036488-6036664 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 133 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 38, 124 |
Conread position: | 603-771 |
Cow position: | chr24:41003985-41004162 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 141 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 30, 49 |
Conread position: | 603-772 |
Cow position: | chr24:6963252-6963074 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 142 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 33, 132 |
Conread position: | 603-773 |
Cow position: | chr24:6668245-6668082 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 127 |
Alignm E-value: | 1e-20 |
Alignm gaps (pig, cow): | 63, 17 |
Conread position: | 603-783 |
Cow position: | chr24:12569523-12569705 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 141 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 27, 108 |
Show alignments to all cow chromosomes.