Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8060D19.3 |
| Conread position: | 293-754 |
| Cow position: | chr26:8282631-8282192 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 314 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 13, 40 |
| Conread position: | 294-772 |
| Cow position: | chr26:12587383-12586904 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 88 |
| Conread position: | 296-716 |
| Cow position: | chr26:8920012-8920452 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 251 |
| Conread position: | 296-772 |
| Cow position: | chr26:2199812-2200278 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 134 |
| Conread position: | 296-772 |
| Cow position: | chr26:18853400-18853862 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 204 |
| Conread position: | 297-450 |
| Cow position: | chr26:11031328-11031485 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 119, 53 |
| Conread position: | 297-485 |
| Cow position: | chr26:9843722-9843528 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 297-519 |
| Cow position: | chr26:8086349-8086568 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 121, 74 |
| Conread position: | 297-773 |
| Cow position: | chr26:6805884-6805415 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 111 |
| Conread position: | 298-718 |
| Cow position: | chr26:12666673-12667088 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 82 |
| Conread position: | 298-731 |
| Cow position: | chr26:9561610-9561173 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 114 |
| Conread position: | 298-753 |
| Cow position: | chr26:6848261-6847817 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 73 |
| Conread position: | 298-771 |
| Cow position: | chr26:17325250-17325727 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 263 |
| Conread position: | 298-771 |
| Cow position: | chr26:17395730-17395263 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 170 |
| Conread position: | 298-772 |
| Cow position: | chr26:5676289-5676781 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 30 |
| Conread position: | 298-772 |
| Cow position: | chr26:14895123-14895595 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 235 |
| Conread position: | 298-772 |
| Cow position: | chr26:19350339-19349863 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 234 |
| Conread position: | 301-546 |
| Cow position: | chr26:1087259-1087002 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 301-771 |
| Cow position: | chr26:34012857-34013306 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 103 |
| Conread position: | 302-726 |
| Cow position: | chr26:1627171-1627585 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 52, 155 |
| Conread position: | 302-773 |
| Cow position: | chr26:14507164-14506670 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 64 |
| Conread position: | 303-761 |
| Cow position: | chr26:4328259-4327809 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 79 |
| Conread position: | 304-772 |
| Cow position: | chr26:30783946-30784395 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 111 |
| Conread position: | 307-601 |
| Cow position: | chr26:13195250-13194958 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 107, 76 |
| Conread position: | 307-772 |
| Cow position: | chr26:3029656-3029189 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 239 |
| Conread position: | 308-599 |
| Cow position: | chr26:2274351-2274070 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 24, 18 |
| Conread position: | 311-761 |
| Cow position: | chr26:32926472-32926019 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 300 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 113, 27 |
| Conread position: | 312-772 |
| Cow position: | chr26:30588174-30587722 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 133 |
| Conread position: | 317-772 |
| Cow position: | chr26:8871028-8871483 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 218 |
| Conread position: | 319-519 |
| Cow position: | chr26:5218984-5218779 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 325-772 |
| Cow position: | chr26:21825477-21825033 (view UCSC Genome Browser custom track) |
| Alignm length: | 460 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 209 |
| Conread position: | 331-779 |
| Cow position: | chr26:4603940-4603505 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 55 |
| Conread position: | 431-773 |
| Cow position: | chr26:16478646-16478977 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 62, 13 |
| Conread position: | 434-609 |
| Cow position: | chr26:16856778-16856606 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 32, 21 |
| Conread position: | 434-741 |
| Cow position: | chr26:1086913-1086614 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 57, 173 |
| Conread position: | 434-772 |
| Cow position: | chr26:11036736-11037059 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 250 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 54, 81 |
| Conread position: | 434-772 |
| Cow position: | chr26:28373911-28373579 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 114 |
| Conread position: | 434-772 |
| Cow position: | chr26:35369254-35369586 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 114 |
| Conread position: | 468-786 |
| Cow position: | chr26:12827302-12827605 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 181, 72 |
| Conread position: | 480-772 |
| Cow position: | chr26:9113247-9113531 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 240, 125 |
| Conread position: | 487-772 |
| Cow position: | chr26:2350830-2350550 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 184, 58 |
| Conread position: | 488-720 |
| Cow position: | chr26:9843322-9843096 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 489-772 |
| Cow position: | chr26:33148499-33148225 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 231, 56 |
| Conread position: | 572-773 |
| Cow position: | chr26:8086539-8086750 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 9, 35 |
| Conread position: | 603-773 |
| Cow position: | chr26:8911328-8911158 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 67, 38 |
| Conread position: | 603-773 |
| Cow position: | chr26:34029445-34029616 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 40, 134 |
Show alignments to all cow chromosomes.