Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8060D19.3
        

               Conread position:
               296-481
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               296-761
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 255
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 168
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 257
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 64
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 41
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 239
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 195
               

               Conread position:
               297-470
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               130, 111
               

               Conread position:
               297-519
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               111, 176
               

               Conread position:
               297-554
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               106, 43
               

               Conread position:
               297-771
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               317
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               127, 107
               

               Conread position:
               297-771
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 109
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 70
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 17
               

               Conread position:
               297-773
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               340
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               121, 109
               

               Conread position:
               298-516
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               160, 115
               

               Conread position:
               298-554
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               81, 86
               

               Conread position:
               298-600
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               228
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               118, 231
               

               Conread position:
               298-761
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 30
               

               Conread position:
               298-767
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 23
               

               Conread position:
               298-771
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 30
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 261
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 159
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 261
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 170
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 263
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 23
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 30
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 52
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 230
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               463, 119
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 257
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 110
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 250
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 167
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 258
               

               Conread position:
               298-791
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 146
               

               Conread position:
               301-601
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 107
               

               Conread position:
               301-602
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 22
               

               Conread position:
               301-716
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               267
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               301-767
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 27
               

               Conread position:
               301-771
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               319
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               36, 87
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 259
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 113
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 91
               

               Conread position:
               302-773
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               337
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               129, 26
               

               Conread position:
               304-726
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               288
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               115, 237
               

               Conread position:
               304-770
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 85
               

               Conread position:
               304-771
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 42
               

               Conread position:
               304-772
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 76
               

               Conread position:
               306-772
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 251
               

               Conread position:
               306-792
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               311
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               232, 72
               

               Conread position:
               310-772
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 18
               

               Conread position:
               312-589
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               14, 90
               

               Conread position:
               312-772
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 72
               

               Conread position:
               312-780
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 63
               

               Conread position:
               317-609
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               201, 72
               

               Conread position:
               330-609
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               50, 54
               

               Conread position:
               337-770
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 52
               

               Conread position:
               340-727
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               272
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               40, 44
               

               Conread position:
               340-767
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 234
               

               Conread position:
               355-772
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 58
               

               Conread position:
               359-772
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               292
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               75, 41
               

               Conread position:
               366-741
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               267
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               55, 187
               

               Conread position:
               371-772
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 173
               

               Conread position:
               375-761
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               63, 39
               

               Conread position:
               402-770
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 33
               

               Conread position:
               417-772
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               258
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               19, 105
               

               Conread position:
               434-727
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               58, 70
               

               Conread position:
               434-772
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 114
               

               Conread position:
               434-772
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               44, 22
               

               Conread position:
               438-602
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               438-772
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               237
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               53, 12
               

               Conread position:
               441-773
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               230
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               44, 104
               

               Conread position:
               442-772
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               240
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               17, 32
               

               Conread position:
               444-609
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               447-762
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               44, 24
               

               Conread position:
               464-772
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 87
               

               Conread position:
               488-726
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               187, 57
               

               Conread position:
               504-772
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               136, 44
               

               Conread position:
               604-772
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               31, 128
               

               Conread position:
               604-786
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               34, 58
               

               Conread position:
               612-773
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               34, 61
               

               Conread position:
               613-772
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               18, 118
               

               Conread position:
               620-772
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               21, 110
               
Show alignments to all cow chromosomes.