Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8060D19.3
        

               Conread position:
               1-287
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               294-772
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 34
               

               Conread position:
               296-489
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               118, 168
               

               Conread position:
               296-589
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               216
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               118, 255
               

               Conread position:
               296-629
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               113, 168
               

               Conread position:
               296-718
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 255
               

               Conread position:
               296-720
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 255
               

               Conread position:
               296-752
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 255
               

               Conread position:
               296-761
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 175
               

               Conread position:
               296-770
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 169
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 101
               

               Conread position:
               296-772
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 32
               

               Conread position:
               297-535
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               123, 85
               

               Conread position:
               297-563
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               16, 74
               

               Conread position:
               297-580
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               139, 109
               

               Conread position:
               297-595
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               116, 65
               

               Conread position:
               297-601
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               103, 111
               

               Conread position:
               297-770
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 32
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 160
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 111
               

               Conread position:
               297-772
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 206
               

               Conread position:
               297-784
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 187
               

               Conread position:
               298-516
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               99, 122
               

               Conread position:
               298-537
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               82, 88
               

               Conread position:
               298-548
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               298-602
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               99, 111
               

               Conread position:
               298-611
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               120, 30
               

               Conread position:
               298-673
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               267
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               115, 146
               

               Conread position:
               298-718
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               129, 30
               

               Conread position:
               298-721
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 88
               

               Conread position:
               298-770
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 140
               

               Conread position:
               298-771
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               321
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               31, 68
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 30
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 97
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               327
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               144, 73
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 30
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 77
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 259
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 167
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 30
               

               Conread position:
               298-772
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 39
               

               Conread position:
               298-773
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 141
               

               Conread position:
               298-782
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               321
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               118, 39
               

               Conread position:
               301-771
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 27
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 258
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 36
               

               Conread position:
               301-772
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 251
               

               Conread position:
               302-519
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               113, 26
               

               Conread position:
               304-761
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 254
               

               Conread position:
               304-772
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 121
               

               Conread position:
               304-772
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 166
               

               Conread position:
               304-773
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               326
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               17, 73
               

               Conread position:
               306-567
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               203
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               120, 16
               

               Conread position:
               307-771
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 168
               

               Conread position:
               307-772
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 240
               

               Conread position:
               307-772
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 204
               

               Conread position:
               308-718
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               277
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               214, 97
               

               Conread position:
               312-772
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 60
               

               Conread position:
               318-772
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 107
               

               Conread position:
               323-750
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 85
               

               Conread position:
               325-770
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 88
               

               Conread position:
               333-771
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               302
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               88, 80
               

               Conread position:
               333-772
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 196
               

               Conread position:
               340-772
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 104
               

               Conread position:
               340-772
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 104
               

               Conread position:
               352-718
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               71, 48
               

               Conread position:
               367-772
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               287
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               63, 46
               

               Conread position:
               372-784
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               288
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               52, 41
               

               Conread position:
               373-772
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 186
               

               Conread position:
               386-761
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 84
               

               Conread position:
               407-601
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               36, 21
               

               Conread position:
               408-700
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               410-772
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               261
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               7, 63
               

               Conread position:
               434-711
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               33, 26
               

               Conread position:
               434-761
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               240
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               49, 113
               

               Conread position:
               434-772
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 109
               

               Conread position:
               434-772
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 115
               

               Conread position:
               434-772
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 114
               

               Conread position:
               434-772
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 110
               

               Conread position:
               434-772
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 29
               

               Conread position:
               435-772
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               241
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               31, 118
               

               Conread position:
               435-788
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               221, 54
               

               Conread position:
               436-772
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               438-773
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               230
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               21, 37
               

               Conread position:
               450-772
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               219, 96
               

               Conread position:
               450-784
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               39, 9
               

               Conread position:
               462-761
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               31, 73
               

               Conread position:
               462-772
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               226
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               29, 81
               

               Conread position:
               503-772
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               23, 94
               

               Conread position:
               507-771
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               20, 102
               

               Conread position:
               529-772
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               186, 19
               

               Conread position:
               541-772
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               179, 63
               

               Conread position:
               546-769
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               124, 8
               

               Conread position:
               572-772
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               11, 78
               

               Conread position:
               603-772
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               35, 128
               

               Conread position:
               603-772
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               31, 132
               
Show alignments to all cow chromosomes.