Cow genome map

Conread name: Ss1.1-Pig4-TMW8060D19.3

Conread position: 293-779
Cow position:
Alignm length: 490
Alignm identity: 332
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 378, 78

Conread position: 294-570
Cow position:
Alignm length: 277
Alignm identity: 188
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 112, 0

Conread position: 296-489
Cow position:
Alignm length: 203
Alignm identity: 144
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 118, 168

Conread position: 296-519
Cow position:
Alignm length: 235
Alignm identity: 166
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 124, 15

Conread position: 296-761
Cow position:
Alignm length: 475
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 143

Conread position: 296-772
Cow position:
Alignm length: 484
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 140

Conread position: 296-772
Cow position:
Alignm length: 487
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 202

Conread position: 296-772
Cow position:
Alignm length: 496
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 59

Conread position: 296-772
Cow position:
Alignm length: 490
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 169

Conread position: 296-772
Cow position:
Alignm length: 500
Alignm identity: 339
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 104, 44

Conread position: 296-772
Cow position:
Alignm length: 489
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 246

Conread position: 296-772
Cow position:
Alignm length: 489
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 172

Conread position: 296-772
Cow position:
Alignm length: 490
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 78

Conread position: 296-772
Cow position:
Alignm length: 491
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 61

Conread position: 296-772
Cow position:
Alignm length: 490
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 239

Conread position: 296-772
Cow position:
Alignm length: 492
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 68

Conread position: 296-772
Cow position:
Alignm length: 490
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 262

Conread position: 296-772
Cow position:
Alignm length: 491
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 257

Conread position: 296-783
Cow position:
Alignm length: 511
Alignm identity: 353
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 71, 32

Conread position: 297-422
Cow position:
Alignm length: 126
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 109, 0

Conread position: 297-423
Cow position:
Alignm length: 128
Alignm identity: 100
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 96, 112

Conread position: 297-491
Cow position:
Alignm length: 204
Alignm identity: 145
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 112, 12

Conread position: 297-491
Cow position:
Alignm length: 205
Alignm identity: 147
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 121, 83

Conread position: 297-511
Cow position:
Alignm length: 229
Alignm identity: 163
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 116, 81

Conread position: 297-511
Cow position:
Alignm length: 223
Alignm identity: 156
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 91, 142

Conread position: 297-537
Cow position:
Alignm length: 251
Alignm identity: 174
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 121, 111

Conread position: 297-569
Cow position:
Alignm length: 284
Alignm identity: 202
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 116, 23

Conread position: 297-580
Cow position:
Alignm length: 295
Alignm identity: 209
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 83, 189

Conread position: 297-602
Cow position:
Alignm length: 318
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 31

Conread position: 297-602
Cow position:
Alignm length: 306
Alignm identity: 209
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 111, 0

Conread position: 297-602
Cow position:
Alignm length: 320
Alignm identity: 230
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 40, 246

Conread position: 297-714
Cow position:
Alignm length: 430
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 171

Conread position: 297-769
Cow position:
Alignm length: 484
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 39

Conread position: 297-772
Cow position:
Alignm length: 485
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 31

Conread position: 297-772
Cow position:
Alignm length: 489
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 31

Conread position: 297-772
Cow position:
Alignm length: 504
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 59

Conread position: 297-772
Cow position:
Alignm length: 492
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 25

Conread position: 297-772
Cow position:
Alignm length: 488
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 86

Conread position: 297-773
Cow position:
Alignm length: 495
Alignm identity: 324
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 118, 62

Conread position: 297-784
Cow position:
Alignm length: 500
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 31

Conread position: 297-785
Cow position:
Alignm length: 501
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 24

Conread position: 297-792
Cow position:
Alignm length: 506
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 165

Conread position: 298-510
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 19, 31

Conread position: 298-569
Cow position:
Alignm length: 277
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 193

Conread position: 298-586
Cow position:
Alignm length: 301
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 117

Conread position: 298-594
Cow position:
Alignm length: 308
Alignm identity: 214
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 104, 118

Conread position: 298-600
Cow position:
Alignm length: 308
Alignm identity: 209
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 143, 108

Conread position: 298-601
Cow position:
Alignm length: 314
Alignm identity: 208
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 46, 23

Conread position: 298-601
Cow position:
Alignm length: 316
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 69, 62

Conread position: 298-744
Cow position:
Alignm length: 458
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 259

Conread position: 298-750
Cow position:
Alignm length: 459
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 78

Conread position: 298-761
Cow position:
Alignm length: 481
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 30

Conread position: 298-767
Cow position:
Alignm length: 482
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 170

Conread position: 298-772
Cow position:
Alignm length: 489
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 263

Conread position: 298-772
Cow position:
Alignm length: 485
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 76

Conread position: 298-772
Cow position:
Alignm length: 494
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 30

Conread position: 298-772
Cow position:
Alignm length: 494
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 39

Conread position: 298-772
Cow position:
Alignm length: 499
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 273

Conread position: 298-772
Cow position:
Alignm length: 490
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 262

Conread position: 298-772
Cow position:
Alignm length: 483
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 74

Conread position: 298-772
Cow position:
Alignm length: 484
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 172

Conread position: 298-772
Cow position:
Alignm length: 488
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 115

Conread position: 298-772
Cow position:
Alignm length: 499
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 265

Conread position: 298-772
Cow position:
Alignm length: 487
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 161

Conread position: 298-772
Cow position:
Alignm length: 488
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 166

Conread position: 298-772
Cow position:
Alignm length: 489
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 170

Conread position: 298-779
Cow position:
Alignm length: 502
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 261

Conread position: 298-791
Cow position:
Alignm length: 511
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 39

Conread position: 299-411
Cow position:
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 299-577
Cow position:
Alignm length: 290
Alignm identity: 191
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 115, 17

Conread position: 299-783
Cow position:
Alignm length: 496
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 75

Conread position: 299-784
Cow position:
Alignm length: 509
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 7

Conread position: 301-422
Cow position:
Alignm length: 122
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 301-761
Cow position:
Alignm length: 472
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 70

Conread position: 301-772
Cow position:
Alignm length: 483
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 249

Conread position: 301-772
Cow position:
Alignm length: 484
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 249

Conread position: 301-772
Cow position:
Alignm length: 492
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 260

Conread position: 301-773
Cow position:
Alignm length: 483
Alignm identity: 308
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 45, 25

Conread position: 302-598
Cow position:
Alignm length: 302
Alignm identity: 210
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 37

Conread position: 302-609
Cow position:
Alignm length: 316
Alignm identity: 201
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 5, 79

Conread position: 302-771
Cow position:
Alignm length: 490
Alignm identity: 325
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 35, 86

Conread position: 304-611
Cow position:
Alignm length: 314
Alignm identity: 207
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 7, 25

Conread position: 304-727
Cow position:
Alignm length: 435
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 24

Conread position: 304-772
Cow position:
Alignm length: 477
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 79

Conread position: 304-773
Cow position:
Alignm length: 483
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 247

Conread position: 305-750
Cow position:
Alignm length: 455
Alignm identity: 290
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 63

Conread position: 306-587
Cow position:
Alignm length: 293
Alignm identity: 217
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 112, 100

Conread position: 306-600
Cow position:
Alignm length: 305
Alignm identity: 206
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 63, 38

Conread position: 306-600
Cow position:
Alignm length: 306
Alignm identity: 210
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 39, 22

Conread position: 307-700
Cow position:
Alignm length: 406
Alignm identity: 270
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 103, 157

Conread position: 307-772
Cow position:
Alignm length: 481
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 57

Conread position: 307-772
Cow position:
Alignm length: 479
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 249

Conread position: 310-772
Cow position:
Alignm length: 477
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 241

Conread position: 310-772
Cow position:
Alignm length: 479
Alignm identity: 290
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 104, 227

Conread position: 310-773
Cow position:
Alignm length: 478
Alignm identity: 311
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 103, 58

Conread position: 310-784
Cow position:
Alignm length: 490
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 234

Conread position: 312-784
Cow position:
Alignm length: 481
Alignm identity: 326
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 21, 104

Conread position: 317-761
Cow position:
Alignm length: 461
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 50

Conread position: 317-761
Cow position:
Alignm length: 456
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 49

Conread position: 317-772
Cow position:
Alignm length: 468
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 234

Conread position: 322-537
Cow position:
Alignm length: 222
Alignm identity: 152
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 108, 82

Conread position: 327-784
Cow position:
Alignm length: 477
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 59

Conread position: 330-750
Cow position:
Alignm length: 454
Alignm identity: 314
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 79, 201

Conread position: 331-773
Cow position:
Alignm length: 461
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 116

Conread position: 332-772
Cow position:
Alignm length: 449
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 215

Conread position: 333-772
Cow position:
Alignm length: 449
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 114

Conread position: 340-610
Cow position:
Alignm length: 277
Alignm identity: 197
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 38, 42

Conread position: 340-772
Cow position:
Alignm length: 436
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 38

Conread position: 344-772
Cow position:
Alignm length: 442
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 71

Conread position: 348-599
Cow position:
Alignm length: 260
Alignm identity: 193
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 57, 141

Conread position: 365-786
Cow position:
Alignm length: 438
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 8

Conread position: 371-773
Cow position:
Alignm length: 417
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 182

Conread position: 376-589
Cow position:
Alignm length: 226
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 42, 37

Conread position: 398-772
Cow position:
Alignm length: 382
Alignm identity: 265
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 66, 44

Conread position: 399-700
Cow position:
Alignm length: 313
Alignm identity: 217
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 157

Conread position: 417-772
Cow position:
Alignm length: 362
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 123

Conread position: 421-643
Cow position:
Alignm length: 231
Alignm identity: 166
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 9, 21

Conread position: 421-761
Cow position:
Alignm length: 350
Alignm identity: 246
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 44, 34

Conread position: 421-772
Cow position:
Alignm length: 365
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 122

Conread position: 434-602
Cow position:
Alignm length: 169
Alignm identity: 129
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 434-771
Cow position:
Alignm length: 342
Alignm identity: 246
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 55, 109

Conread position: 434-772
Cow position:
Alignm length: 357
Alignm identity: 238
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 55, 113

Conread position: 435-771
Cow position:
Alignm length: 342
Alignm identity: 244
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 54, 108

Conread position: 435-771
Cow position:
Alignm length: 345
Alignm identity: 223
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 30, 25

Conread position: 437-772
Cow position:
Alignm length: 345
Alignm identity: 246
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 50, 25

Conread position: 444-707
Cow position:
Alignm length: 267
Alignm identity: 192
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 49, 88

Conread position: 445-602
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 47, 90

Conread position: 445-784
Cow position:
Alignm length: 345
Alignm identity: 244
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 43, 87

Conread position: 448-761
Cow position:
Alignm length: 315
Alignm identity: 226
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 57, 11

Conread position: 462-772
Cow position:
Alignm length: 320
Alignm identity: 227
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 29, 89

Conread position: 464-600
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 27, 84

Conread position: 483-760
Cow position:
Alignm length: 278
Alignm identity: 192
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 544-772
Cow position:
Alignm length: 230
Alignm identity: 163
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 217, 58

Conread position: 548-772
Cow position:
Alignm length: 228
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 6, 58

Conread position: 550-761
Cow position:
Alignm length: 212
Alignm identity: 148
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 603-753
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 603-761
Cow position:
Alignm length: 169
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 131

Conread position: 603-772
Cow position:
Alignm length: 181
Alignm identity: 140
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 33, 131

Conread position: 603-772
Cow position:
Alignm length: 182
Alignm identity: 146
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 33, 132

Conread position: 604-772
Cow position:
Alignm length: 182
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 132

Conread position: 605-772
Cow position:
Alignm length: 180
Alignm identity: 139
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 31, 130

Conread position: 606-773
Cow position:
Alignm length: 171
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 61

Conread position: 617-772
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 32

Conread position: 621-772
Cow position:
Alignm length: 163
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 5, 109

Conread position: 639-772
Cow position:
Alignm length: 135
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 122, 8

Conread position: 646-772
Cow position:
Alignm length: 135
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 86

Conread position: 657-772
Cow position:
Alignm length: 117
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 104, 6

Show alignments to all cow chromosomes.