Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8060D19.3 |
| Conread position: | 293-779 |
| Cow position: | chr5:49757732-49757282 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 332 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 378, 78 |
| Conread position: | 294-570 |
| Cow position: | chr5:32363893-32364160 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 296-489 |
| Cow position: | chr5:307382-307181 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 118, 168 |
| Conread position: | 296-519 |
| Cow position: | chr5:27197265-27197492 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 124, 15 |
| Conread position: | 296-761 |
| Cow position: | chr5:4018250-4017788 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 143 |
| Conread position: | 296-772 |
| Cow position: | chr5:988117-987646 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 140 |
| Conread position: | 296-772 |
| Cow position: | chr5:4757232-4756761 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 202 |
| Conread position: | 296-772 |
| Cow position: | chr5:10775324-10774841 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 59 |
| Conread position: | 296-772 |
| Cow position: | chr5:12731765-12731293 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 169 |
| Conread position: | 296-772 |
| Cow position: | chr5:18400746-18400275 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 339 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 104, 44 |
| Conread position: | 296-772 |
| Cow position: | chr5:18664728-18665188 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 246 |
| Conread position: | 296-772 |
| Cow position: | chr5:27908324-27907849 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 172 |
| Conread position: | 296-772 |
| Cow position: | chr5:31100477-31100015 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 78 |
| Conread position: | 296-772 |
| Cow position: | chr5:32773710-32774187 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 61 |
| Conread position: | 296-772 |
| Cow position: | chr5:35301043-35301520 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 239 |
| Conread position: | 296-772 |
| Cow position: | chr5:46777338-46777815 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 68 |
| Conread position: | 296-772 |
| Cow position: | chr5:46808256-46808725 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 262 |
| Conread position: | 296-772 |
| Cow position: | chr5:59061581-59062058 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 257 |
| Conread position: | 296-783 |
| Cow position: | chr5:51308915-51308435 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 353 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 71, 32 |
| Conread position: | 297-422 |
| Cow position: | chr5:24999044-24998920 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 297-423 |
| Cow position: | chr5:13046401-13046527 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 96, 112 |
| Conread position: | 297-491 |
| Cow position: | chr5:41466023-41466222 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 112, 12 |
| Conread position: | 297-491 |
| Cow position: | chr5:53624977-53624775 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 121, 83 |
| Conread position: | 297-511 |
| Cow position: | chr5:40349982-40349757 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 116, 81 |
| Conread position: | 297-511 |
| Cow position: | chr5:58151835-58151614 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 91, 142 |
| Conread position: | 297-537 |
| Cow position: | chr5:32308160-32307912 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 121, 111 |
| Conread position: | 297-569 |
| Cow position: | chr5:28949934-28949654 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 116, 23 |
| Conread position: | 297-580 |
| Cow position: | chr5:24107738-24107453 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 83, 189 |
| Conread position: | 297-602 |
| Cow position: | chr5:23686945-23686641 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 31 |
| Conread position: | 297-602 |
| Cow position: | chr5:34297887-34298175 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 297-602 |
| Cow position: | chr5:54860976-54860667 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 40, 246 |
| Conread position: | 297-714 |
| Cow position: | chr5:12642799-12642381 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 171 |
| Conread position: | 297-769 |
| Cow position: | chr5:23229939-23230399 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 39 |
| Conread position: | 297-772 |
| Cow position: | chr5:4386189-4386648 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 31 |
| Conread position: | 297-772 |
| Cow position: | chr5:18560457-18559983 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 31 |
| Conread position: | 297-772 |
| Cow position: | chr5:26183786-26184283 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 59 |
| Conread position: | 297-772 |
| Cow position: | chr5:41527846-41527375 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 25 |
| Conread position: | 297-772 |
| Cow position: | chr5:45701260-45701731 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 86 |
| Conread position: | 297-773 |
| Cow position: | chr5:7811307-7810827 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 324 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 118, 62 |
| Conread position: | 297-784 |
| Cow position: | chr5:18885588-18885097 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 31 |
| Conread position: | 297-785 |
| Cow position: | chr5:24151726-24152202 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 24 |
| Conread position: | 297-792 |
| Cow position: | chr5:40923694-40923214 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 165 |
| Conread position: | 298-510 |
| Cow position: | chr5:41956422-41956220 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 19, 31 |
| Conread position: | 298-569 |
| Cow position: | chr5:46629232-46628961 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 193 |
| Conread position: | 298-586 |
| Cow position: | chr5:47893598-47893300 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 117 |
| Conread position: | 298-594 |
| Cow position: | chr5:46004909-46004605 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 104, 118 |
| Conread position: | 298-600 |
| Cow position: | chr5:51770012-51769710 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 143, 108 |
| Conread position: | 298-601 |
| Cow position: | chr5:20311404-20311095 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 46, 23 |
| Conread position: | 298-601 |
| Cow position: | chr5:73488613-73488303 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 230 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 69, 62 |
| Conread position: | 298-744 |
| Cow position: | chr5:54791686-54791240 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 259 |
| Conread position: | 298-750 |
| Cow position: | chr5:46668890-46669320 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 78 |
| Conread position: | 298-761 |
| Cow position: | chr5:23669182-23668728 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 30 |
| Conread position: | 298-767 |
| Cow position: | chr5:10855870-10855400 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 170 |
| Conread position: | 298-772 |
| Cow position: | chr5:1341086-1340624 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 263 |
| Conread position: | 298-772 |
| Cow position: | chr5:2915396-2915856 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 76 |
| Conread position: | 298-772 |
| Cow position: | chr5:3503159-3502685 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 30 |
| Conread position: | 298-772 |
| Cow position: | chr5:3786874-3787359 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 39 |
| Conread position: | 298-772 |
| Cow position: | chr5:4070155-4070638 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 273 |
| Conread position: | 298-772 |
| Cow position: | chr5:6153956-6153476 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 262 |
| Conread position: | 298-772 |
| Cow position: | chr5:7274791-7275256 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 74 |
| Conread position: | 298-772 |
| Cow position: | chr5:24099612-24100071 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 172 |
| Conread position: | 298-772 |
| Cow position: | chr5:46737630-46737172 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 115 |
| Conread position: | 298-772 |
| Cow position: | chr5:48807792-48807311 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 265 |
| Conread position: | 298-772 |
| Cow position: | chr5:57481592-57481117 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 161 |
| Conread position: | 298-772 |
| Cow position: | chr5:59283263-59283738 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 166 |
| Conread position: | 298-772 |
| Cow position: | chr5:64781069-64780592 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 170 |
| Conread position: | 298-779 |
| Cow position: | chr5:55628938-55629415 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 261 |
| Conread position: | 298-791 |
| Cow position: | chr5:30580286-30580783 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 39 |
| Conread position: | 299-411 |
| Cow position: | chr5:27654759-27654871 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 299-577 |
| Cow position: | chr5:41376957-41376669 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 115, 17 |
| Conread position: | 299-783 |
| Cow position: | chr5:41960789-41960314 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 75 |
| Conread position: | 299-784 |
| Cow position: | chr5:3965395-3965887 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 7 |
| Conread position: | 301-422 |
| Cow position: | chr5:31700421-31700301 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 301-761 |
| Cow position: | chr5:46664967-46665428 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 70 |
| Conread position: | 301-772 |
| Cow position: | chr5:5104172-5104637 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 249 |
| Conread position: | 301-772 |
| Cow position: | chr5:23959379-23958908 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 249 |
| Conread position: | 301-772 |
| Cow position: | chr5:37733296-37733771 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 260 |
| Conread position: | 301-773 |
| Cow position: | chr5:47077949-47078405 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 308 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 45, 25 |
| Conread position: | 302-598 |
| Cow position: | chr5:53703249-53702961 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 25, 37 |
| Conread position: | 302-609 |
| Cow position: | chr5:62361629-62361940 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 5, 79 |
| Conread position: | 302-771 |
| Cow position: | chr5:40789016-40789478 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 325 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 35, 86 |
| Conread position: | 304-611 |
| Cow position: | chr5:52424180-52423873 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 7, 25 |
| Conread position: | 304-727 |
| Cow position: | chr5:34697557-34697975 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 24 |
| Conread position: | 304-772 |
| Cow position: | chr5:49519513-49519970 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 79 |
| Conread position: | 304-773 |
| Cow position: | chr5:18121530-18121059 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 247 |
| Conread position: | 305-750 |
| Cow position: | chr5:673909-674334 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 63 |
| Conread position: | 306-587 |
| Cow position: | chr5:29434763-29434484 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 112, 100 |
| Conread position: | 306-600 |
| Cow position: | chr5:34287266-34286975 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 63, 38 |
| Conread position: | 306-600 |
| Cow position: | chr5:60716660-60716359 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 210 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 39, 22 |
| Conread position: | 307-700 |
| Cow position: | chr5:42505960-42506354 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 270 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 103, 157 |
| Conread position: | 307-772 |
| Cow position: | chr5:26078237-26077771 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 57 |
| Conread position: | 307-772 |
| Cow position: | chr5:31707518-31707985 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 249 |
| Conread position: | 310-772 |
| Cow position: | chr5:47830119-47829655 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 241 |
| Conread position: | 310-772 |
| Cow position: | chr5:58196974-58197438 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 290 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 104, 227 |
| Conread position: | 310-773 |
| Cow position: | chr5:43193449-43192999 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 311 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 103, 58 |
| Conread position: | 310-784 |
| Cow position: | chr5:18273720-18274186 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 234 |
| Conread position: | 312-784 |
| Cow position: | chr5:15375671-15376119 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 326 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 21, 104 |
| Conread position: | 317-761 |
| Cow position: | chr5:10842419-10841971 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 50 |
| Conread position: | 317-761 |
| Cow position: | chr5:29767093-29767520 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 49 |
| Conread position: | 317-772 |
| Cow position: | chr5:10813785-10813328 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 234 |
| Conread position: | 322-537 |
| Cow position: | chr5:41929276-41929061 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 108, 82 |
| Conread position: | 327-784 |
| Cow position: | chr5:27003211-27003671 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 59 |
| Conread position: | 330-750 |
| Cow position: | chr5:46645918-46646351 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 314 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 79, 201 |
| Conread position: | 331-773 |
| Cow position: | chr5:14784387-14783943 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 116 |
| Conread position: | 332-772 |
| Cow position: | chr5:32951882-32952316 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 215 |
| Conread position: | 333-772 |
| Cow position: | chr5:32281784-32281356 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 114 |
| Conread position: | 340-610 |
| Cow position: | chr5:30362566-30362315 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 38, 42 |
| Conread position: | 340-772 |
| Cow position: | chr5:7143058-7142643 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 38 |
| Conread position: | 344-772 |
| Cow position: | chr5:50870615-50871029 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 71 |
| Conread position: | 348-599 |
| Cow position: | chr5:14344438-14344182 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 57, 141 |
| Conread position: | 365-786 |
| Cow position: | chr5:61081199-61080775 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 8 |
| Conread position: | 371-773 |
| Cow position: | chr5:52434758-52435158 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 182 |
| Conread position: | 376-589 |
| Cow position: | chr5:41554307-41554089 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 42, 37 |
| Conread position: | 398-772 |
| Cow position: | chr5:24295670-24296033 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 265 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 66, 44 |
| Conread position: | 399-700 |
| Cow position: | chr5:55653797-55653494 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 14, 157 |
| Conread position: | 417-772 |
| Cow position: | chr5:53945912-53946251 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 123 |
| Conread position: | 421-643 |
| Cow position: | chr5:11115673-11115448 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 9, 21 |
| Conread position: | 421-761 |
| Cow position: | chr5:62760181-62759851 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 44, 34 |
| Conread position: | 421-772 |
| Cow position: | chr5:34189993-34190339 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 122 |
| Conread position: | 434-602 |
| Cow position: | chr5:40757554-40757716 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 434-771 |
| Cow position: | chr5:13046747-13047060 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 246 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 55, 109 |
| Conread position: | 434-772 |
| Cow position: | chr5:18114489-18114140 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 55, 113 |
| Conread position: | 435-771 |
| Cow position: | chr5:6587493-6587167 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 244 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 54, 108 |
| Conread position: | 435-771 |
| Cow position: | chr5:69622680-69623011 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 25 |
| Conread position: | 437-772 |
| Cow position: | chr5:28014130-28014455 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 246 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 50, 25 |
| Conread position: | 444-707 |
| Cow position: | chr5:16917375-16917125 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 49, 88 |
| Conread position: | 445-602 |
| Cow position: | chr5:53624720-53624567 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 47, 90 |
| Conread position: | 445-784 |
| Cow position: | chr5:54620152-54620477 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 43, 87 |
| Conread position: | 448-761 |
| Cow position: | chr5:35527046-35527338 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 57, 11 |
| Conread position: | 462-772 |
| Cow position: | chr5:10919958-10920260 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 29, 89 |
| Conread position: | 464-600 |
| Cow position: | chr5:11129244-11129106 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 27, 84 |
| Conread position: | 483-760 |
| Cow position: | chr5:3822109-3822363 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 544-772 |
| Cow position: | chr5:27197811-27198031 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 217, 58 |
| Conread position: | 548-772 |
| Cow position: | chr5:2459188-2459405 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 6, 58 |
| Conread position: | 550-761 |
| Cow position: | chr5:76096262-76096462 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 603-753 |
| Cow position: | chr5:23755222-23755080 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 603-761 |
| Cow position: | chr5:23236160-23236325 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 33, 131 |
| Conread position: | 603-772 |
| Cow position: | chr5:4684560-4684383 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 33, 131 |
| Conread position: | 603-772 |
| Cow position: | chr5:41376610-41376432 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 33, 132 |
| Conread position: | 604-772 |
| Cow position: | chr5:40131358-40131180 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 10, 132 |
| Conread position: | 605-772 |
| Cow position: | chr5:307167-306992 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 31, 130 |
| Conread position: | 606-773 |
| Cow position: | chr5:41956169-41956002 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 61 |
| Conread position: | 617-772 |
| Cow position: | chr5:2975051-2975212 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 32 |
| Conread position: | 621-772 |
| Cow position: | chr5:31122325-31122165 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 5, 109 |
| Conread position: | 639-772 |
| Cow position: | chr5:51744567-51744697 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 122, 8 |
| Conread position: | 646-772 |
| Cow position: | chr5:37378417-37378548 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 86 |
| Conread position: | 657-772 |
| Cow position: | chr5:12681742-12681629 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 104, 6 |
Show alignments to all cow chromosomes.