Cow genome map

Conread name: Ss1.1-Pig4-TMW8060D19.3

Conread position: 294-772
Cow position:
Alignm length: 493
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 256

Conread position: 296-519
Cow position:
Alignm length: 234
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 118, 0

Conread position: 296-602
Cow position:
Alignm length: 318
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 255

Conread position: 296-772
Cow position:
Alignm length: 492
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 172

Conread position: 296-772
Cow position:
Alignm length: 483
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 24

Conread position: 296-772
Cow position:
Alignm length: 492
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 28

Conread position: 296-772
Cow position:
Alignm length: 498
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 168

Conread position: 296-772
Cow position:
Alignm length: 491
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 157

Conread position: 296-772
Cow position:
Alignm length: 491
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 168

Conread position: 296-772
Cow position:
Alignm length: 490
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 83

Conread position: 296-772
Cow position:
Alignm length: 490
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 255

Conread position: 296-773
Cow position:
Alignm length: 495
Alignm identity: 338
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 117, 48

Conread position: 296-779
Cow position:
Alignm length: 499
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 167

Conread position: 297-434
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 111, 0

Conread position: 297-696
Cow position:
Alignm length: 405
Alignm identity: 239
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 119, 74

Conread position: 297-707
Cow position:
Alignm length: 423
Alignm identity: 290
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 43, 14

Conread position: 297-720
Cow position:
Alignm length: 426
Alignm identity: 268
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 125, 61

Conread position: 297-728
Cow position:
Alignm length: 455
Alignm identity: 313
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 121, 325

Conread position: 297-761
Cow position:
Alignm length: 483
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 115

Conread position: 297-761
Cow position:
Alignm length: 487
Alignm identity: 329
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 114, 35

Conread position: 297-769
Cow position:
Alignm length: 482
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 54

Conread position: 297-771
Cow position:
Alignm length: 486
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 67

Conread position: 297-771
Cow position:
Alignm length: 481
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 100

Conread position: 297-771
Cow position:
Alignm length: 490
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 24

Conread position: 297-772
Cow position:
Alignm length: 482
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 117

Conread position: 297-772
Cow position:
Alignm length: 489
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 261

Conread position: 297-772
Cow position:
Alignm length: 496
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 245

Conread position: 297-772
Cow position:
Alignm length: 492
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 48

Conread position: 297-772
Cow position:
Alignm length: 493
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 9

Conread position: 297-779
Cow position:
Alignm length: 494
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 120

Conread position: 297-784
Cow position:
Alignm length: 504
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 109

Conread position: 297-784
Cow position:
Alignm length: 501
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 74

Conread position: 298-540
Cow position:
Alignm length: 259
Alignm identity: 184
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 74

Conread position: 298-598
Cow position:
Alignm length: 303
Alignm identity: 206
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 36, 30

Conread position: 298-600
Cow position:
Alignm length: 312
Alignm identity: 208
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 134, 82

Conread position: 298-601
Cow position:
Alignm length: 315
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 56

Conread position: 298-602
Cow position:
Alignm length: 307
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 66

Conread position: 298-707
Cow position:
Alignm length: 432
Alignm identity: 284
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 122, 110

Conread position: 298-715
Cow position:
Alignm length: 429
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 30

Conread position: 298-756
Cow position:
Alignm length: 467
Alignm identity: 301
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 104, 161

Conread position: 298-767
Cow position:
Alignm length: 482
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 169

Conread position: 298-770
Cow position:
Alignm length: 490
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 243

Conread position: 298-771
Cow position:
Alignm length: 480
Alignm identity: 325
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 107, 133

Conread position: 298-772
Cow position:
Alignm length: 490
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 233

Conread position: 298-772
Cow position:
Alignm length: 487
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 98

Conread position: 298-772
Cow position:
Alignm length: 491
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 30

Conread position: 298-772
Cow position:
Alignm length: 490
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 146

Conread position: 298-772
Cow position:
Alignm length: 488
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 234

Conread position: 298-772
Cow position:
Alignm length: 484
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 147

Conread position: 298-772
Cow position:
Alignm length: 499
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 262

Conread position: 298-772
Cow position:
Alignm length: 489
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 261

Conread position: 298-772
Cow position:
Alignm length: 487
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 170

Conread position: 298-772
Cow position:
Alignm length: 494
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 231

Conread position: 298-772
Cow position:
Alignm length: 484
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 196

Conread position: 298-772
Cow position:
Alignm length: 486
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 169

Conread position: 298-772
Cow position:
Alignm length: 487
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 172

Conread position: 298-772
Cow position:
Alignm length: 493
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 30

Conread position: 298-779
Cow position:
Alignm length: 501
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 260

Conread position: 299-554
Cow position:
Alignm length: 269
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 63

Conread position: 299-600
Cow position:
Alignm length: 307
Alignm identity: 208
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 101, 7

Conread position: 299-601
Cow position:
Alignm length: 306
Alignm identity: 210
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 114, 129

Conread position: 299-761
Cow position:
Alignm length: 473
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 30

Conread position: 301-599
Cow position:
Alignm length: 310
Alignm identity: 223
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 119, 28

Conread position: 301-716
Cow position:
Alignm length: 429
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 85

Conread position: 301-718
Cow position:
Alignm length: 434
Alignm identity: 302
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 117, 14

Conread position: 301-748
Cow position:
Alignm length: 459
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 178

Conread position: 301-748
Cow position:
Alignm length: 456
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 164

Conread position: 301-772
Cow position:
Alignm length: 479
Alignm identity: 319
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 116, 27

Conread position: 302-761
Cow position:
Alignm length: 479
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 194

Conread position: 302-763
Cow position:
Alignm length: 480
Alignm identity: 314
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 78, 256

Conread position: 302-774
Cow position:
Alignm length: 485
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 226

Conread position: 303-552
Cow position:
Alignm length: 259
Alignm identity: 188
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 60, 137

Conread position: 304-726
Cow position:
Alignm length: 442
Alignm identity: 303
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 76, 59

Conread position: 304-772
Cow position:
Alignm length: 474
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 24

Conread position: 304-772
Cow position:
Alignm length: 478
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 250

Conread position: 304-772
Cow position:
Alignm length: 482
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 243

Conread position: 306-601
Cow position:
Alignm length: 308
Alignm identity: 202
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 74, 49

Conread position: 306-772
Cow position:
Alignm length: 494
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 22

Conread position: 306-772
Cow position:
Alignm length: 479
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 251

Conread position: 307-600
Cow position:
Alignm length: 305
Alignm identity: 208
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 102, 161

Conread position: 307-761
Cow position:
Alignm length: 465
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 37

Conread position: 307-772
Cow position:
Alignm length: 480
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 225

Conread position: 307-772
Cow position:
Alignm length: 480
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 22

Conread position: 307-786
Cow position:
Alignm length: 489
Alignm identity: 328
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 129, 100

Conread position: 310-599
Cow position:
Alignm length: 299
Alignm identity: 198
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 101, 78

Conread position: 311-552
Cow position:
Alignm length: 257
Alignm identity: 187
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 16, 0

Conread position: 311-589
Cow position:
Alignm length: 285
Alignm identity: 194
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 93, 107

Conread position: 311-772
Cow position:
Alignm length: 475
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 241

Conread position: 312-772
Cow position:
Alignm length: 479
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 239

Conread position: 312-773
Cow position:
Alignm length: 471
Alignm identity: 315
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 106, 52

Conread position: 312-773
Cow position:
Alignm length: 473
Alignm identity: 307
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 11, 115

Conread position: 312-784
Cow position:
Alignm length: 485
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 94

Conread position: 316-592
Cow position:
Alignm length: 280
Alignm identity: 188
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 122, 84

Conread position: 316-772
Cow position:
Alignm length: 459
Alignm identity: 308
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 404, 98

Conread position: 317-771
Cow position:
Alignm length: 472
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 154

Conread position: 317-787
Cow position:
Alignm length: 484
Alignm identity: 302
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 104, 68

Conread position: 322-600
Cow position:
Alignm length: 291
Alignm identity: 199
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 102, 91

Conread position: 329-772
Cow position:
Alignm length: 457
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 30

Conread position: 330-772
Cow position:
Alignm length: 455
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 198

Conread position: 331-718
Cow position:
Alignm length: 403
Alignm identity: 279
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 128, 25

Conread position: 331-772
Cow position:
Alignm length: 455
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 220

Conread position: 343-580
Cow position:
Alignm length: 242
Alignm identity: 163
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 77

Conread position: 347-761
Cow position:
Alignm length: 420
Alignm identity: 290
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 86, 20

Conread position: 351-761
Cow position:
Alignm length: 431
Alignm identity: 298
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 48, 270

Conread position: 351-772
Cow position:
Alignm length: 452
Alignm identity: 314
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 63, 120

Conread position: 352-770
Cow position:
Alignm length: 444
Alignm identity: 291
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 134

Conread position: 352-771
Cow position:
Alignm length: 436
Alignm identity: 282
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 65, 56

Conread position: 362-580
Cow position:
Alignm length: 229
Alignm identity: 170
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 72, 51

Conread position: 373-772
Cow position:
Alignm length: 410
Alignm identity: 273
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 61, 16

Conread position: 393-761
Cow position:
Alignm length: 375
Alignm identity: 260
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 47, 23

Conread position: 393-771
Cow position:
Alignm length: 388
Alignm identity: 264
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 58, 20

Conread position: 400-727
Cow position:
Alignm length: 333
Alignm identity: 221
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 16, 46

Conread position: 400-771
Cow position:
Alignm length: 379
Alignm identity: 261
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 91, 132

Conread position: 405-601
Cow position:
Alignm length: 203
Alignm identity: 141
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 13, 38

Conread position: 421-772
Cow position:
Alignm length: 355
Alignm identity: 243
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 68, 35

Conread position: 429-772
Cow position:
Alignm length: 349
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 5

Conread position: 433-600
Cow position:
Alignm length: 171
Alignm identity: 128
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 64

Conread position: 434-585
Cow position:
Alignm length: 155
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 55, 91

Conread position: 434-696
Cow position:
Alignm length: 264
Alignm identity: 178
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 207, 59

Conread position: 434-761
Cow position:
Alignm length: 331
Alignm identity: 232
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 56, 108

Conread position: 434-772
Cow position:
Alignm length: 345
Alignm identity: 250
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 36, 16

Conread position: 434-781
Cow position:
Alignm length: 353
Alignm identity: 249
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 235, 78

Conread position: 438-771
Cow position:
Alignm length: 355
Alignm identity: 242
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 53, 12

Conread position: 438-772
Cow position:
Alignm length: 341
Alignm identity: 246
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 53, 22

Conread position: 438-772
Cow position:
Alignm length: 341
Alignm identity: 238
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 51, 18

Conread position: 438-772
Cow position:
Alignm length: 339
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 110

Conread position: 442-773
Cow position:
Alignm length: 333
Alignm identity: 232
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 319, 22

Conread position: 442-773
Cow position:
Alignm length: 336
Alignm identity: 238
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 49, 29

Conread position: 443-601
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 444-602
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 49, 107

Conread position: 454-772
Cow position:
Alignm length: 327
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 71

Conread position: 477-786
Cow position:
Alignm length: 313
Alignm identity: 217
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 15, 70

Conread position: 603-739
Cow position:
Alignm length: 145
Alignm identity: 118
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 41, 131

Conread position: 603-767
Cow position:
Alignm length: 173
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 41, 122

Conread position: 604-772
Cow position:
Alignm length: 183
Alignm identity: 140
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 18, 136

Conread position: 646-787
Cow position:
Alignm length: 150
Alignm identity: 119
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 0

Show alignments to all cow chromosomes.