Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8060D19.3 |
| Conread position: | 294-772 |
| Cow position: | chr9:13474759-13474286 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 256 |
| Conread position: | 296-519 |
| Cow position: | chr9:5798783-5798550 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 296-602 |
| Cow position: | chr9:46859448-46859132 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 255 |
| Conread position: | 296-772 |
| Cow position: | chr9:779807-779332 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 172 |
| Conread position: | 296-772 |
| Cow position: | chr9:3309641-3310103 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 24 |
| Conread position: | 296-772 |
| Cow position: | chr9:4942793-4942319 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 28 |
| Conread position: | 296-772 |
| Cow position: | chr9:30827751-30828230 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 168 |
| Conread position: | 296-772 |
| Cow position: | chr9:31065732-31066207 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 157 |
| Conread position: | 296-772 |
| Cow position: | chr9:44384274-44384752 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 168 |
| Conread position: | 296-772 |
| Cow position: | chr9:50791727-50792204 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 83 |
| Conread position: | 296-772 |
| Cow position: | chr9:51211695-51212172 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 255 |
| Conread position: | 296-773 |
| Cow position: | chr9:6977347-6977808 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 338 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 117, 48 |
| Conread position: | 296-779 |
| Cow position: | chr9:2212152-2212636 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 167 |
| Conread position: | 297-434 |
| Cow position: | chr9:22432288-22432424 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 297-696 |
| Cow position: | chr9:59447361-59447744 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 119, 74 |
| Conread position: | 297-707 |
| Cow position: | chr9:3764014-3764410 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 290 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 43, 14 |
| Conread position: | 297-720 |
| Cow position: | chr9:3167944-3168346 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 268 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 125, 61 |
| Conread position: | 297-728 |
| Cow position: | chr9:4282982-4283417 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 313 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 121, 325 |
| Conread position: | 297-761 |
| Cow position: | chr9:651016-650548 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 115 |
| Conread position: | 297-761 |
| Cow position: | chr9:30435587-30436049 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 329 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 114, 35 |
| Conread position: | 297-769 |
| Cow position: | chr9:44819163-44819623 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 54 |
| Conread position: | 297-771 |
| Cow position: | chr9:3727618-3728073 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 67 |
| Conread position: | 297-771 |
| Cow position: | chr9:5141727-5142185 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 100 |
| Conread position: | 297-771 |
| Cow position: | chr9:26083541-26083072 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 24 |
| Conread position: | 297-772 |
| Cow position: | chr9:1981288-1981748 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 117 |
| Conread position: | 297-772 |
| Cow position: | chr9:1995375-1994918 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 261 |
| Conread position: | 297-772 |
| Cow position: | chr9:7158932-7158454 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 245 |
| Conread position: | 297-772 |
| Cow position: | chr9:17304961-17304487 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 48 |
| Conread position: | 297-772 |
| Cow position: | chr9:20939335-20939800 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 9 |
| Conread position: | 297-779 |
| Cow position: | chr9:50698318-50698791 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 120 |
| Conread position: | 297-784 |
| Cow position: | chr9:828093-827609 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 109 |
| Conread position: | 297-784 |
| Cow position: | chr9:59428025-59428501 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 74 |
| Conread position: | 298-540 |
| Cow position: | chr9:8284054-8283804 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 21, 74 |
| Conread position: | 298-598 |
| Cow position: | chr9:50729122-50728835 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 36, 30 |
| Conread position: | 298-600 |
| Cow position: | chr9:7016895-7017194 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 134, 82 |
| Conread position: | 298-601 |
| Cow position: | chr9:10322819-10323130 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 56 |
| Conread position: | 298-602 |
| Cow position: | chr9:16176785-16177078 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 66 |
| Conread position: | 298-707 |
| Cow position: | chr9:9647138-9647555 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 122, 110 |
| Conread position: | 298-715 |
| Cow position: | chr9:60276999-60276584 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 30 |
| Conread position: | 298-756 |
| Cow position: | chr9:24980908-24980467 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 301 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 104, 161 |
| Conread position: | 298-767 |
| Cow position: | chr9:18508806-18508342 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 169 |
| Conread position: | 298-770 |
| Cow position: | chr9:31808593-31809062 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 243 |
| Conread position: | 298-771 |
| Cow position: | chr9:3936417-3935969 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 325 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 107, 133 |
| Conread position: | 298-772 |
| Cow position: | chr9:4533510-4533982 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 233 |
| Conread position: | 298-772 |
| Cow position: | chr9:6250315-6250772 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 98 |
| Conread position: | 298-772 |
| Cow position: | chr9:7061064-7060587 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 30 |
| Conread position: | 298-772 |
| Cow position: | chr9:19158523-19158044 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 146 |
| Conread position: | 298-772 |
| Cow position: | chr9:27783204-27783674 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 234 |
| Conread position: | 298-772 |
| Cow position: | chr9:28022822-28023289 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 147 |
| Conread position: | 298-772 |
| Cow position: | chr9:29627741-29627262 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 262 |
| Conread position: | 298-772 |
| Cow position: | chr9:30673391-30673868 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 261 |
| Conread position: | 298-772 |
| Cow position: | chr9:32969963-32970432 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 170 |
| Conread position: | 298-772 |
| Cow position: | chr9:37161797-37161325 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 231 |
| Conread position: | 298-772 |
| Cow position: | chr9:37970191-37969720 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 196 |
| Conread position: | 298-772 |
| Cow position: | chr9:42310694-42311167 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 169 |
| Conread position: | 298-772 |
| Cow position: | chr9:51181161-51180691 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 172 |
| Conread position: | 298-772 |
| Cow position: | chr9:59537114-59537589 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 30 |
| Conread position: | 298-779 |
| Cow position: | chr9:21410313-21410801 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 260 |
| Conread position: | 299-554 |
| Cow position: | chr9:20307993-20307729 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 63 |
| Conread position: | 299-600 |
| Cow position: | chr9:46461031-46460731 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 101, 7 |
| Conread position: | 299-601 |
| Cow position: | chr9:35315863-35315564 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 114, 129 |
| Conread position: | 299-761 |
| Cow position: | chr9:3005219-3004767 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 30 |
| Conread position: | 301-599 |
| Cow position: | chr9:39731037-39730735 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 223 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 119, 28 |
| Conread position: | 301-716 |
| Cow position: | chr9:29027192-29026773 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 85 |
| Conread position: | 301-718 |
| Cow position: | chr9:2053943-2054351 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 302 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 117, 14 |
| Conread position: | 301-748 |
| Cow position: | chr9:47003205-47003641 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 178 |
| Conread position: | 301-748 |
| Cow position: | chr9:59481777-59481336 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 164 |
| Conread position: | 301-772 |
| Cow position: | chr9:46042213-46041762 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 319 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 116, 27 |
| Conread position: | 302-761 |
| Cow position: | chr9:3963110-3962647 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 194 |
| Conread position: | 302-763 |
| Cow position: | chr9:30488614-30489072 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 314 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 78, 256 |
| Conread position: | 302-774 |
| Cow position: | chr9:25188120-25188581 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 226 |
| Conread position: | 303-552 |
| Cow position: | chr9:29329657-29329909 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 60, 137 |
| Conread position: | 304-726 |
| Cow position: | chr9:2497955-2497531 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 303 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 76, 59 |
| Conread position: | 304-772 |
| Cow position: | chr9:221487-221045 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 24 |
| Conread position: | 304-772 |
| Cow position: | chr9:10937617-10938081 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 250 |
| Conread position: | 304-772 |
| Cow position: | chr9:28678994-28679454 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 243 |
| Conread position: | 306-601 |
| Cow position: | chr9:21110560-21110864 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 74, 49 |
| Conread position: | 306-772 |
| Cow position: | chr9:5004996-5005474 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 22 |
| Conread position: | 306-772 |
| Cow position: | chr9:22654600-22655068 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 251 |
| Conread position: | 307-600 |
| Cow position: | chr9:130139-129839 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 102, 161 |
| Conread position: | 307-761 |
| Cow position: | chr9:17063357-17062907 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 37 |
| Conread position: | 307-772 |
| Cow position: | chr9:1250975-1250509 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 225 |
| Conread position: | 307-772 |
| Cow position: | chr9:47042984-47043449 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 22 |
| Conread position: | 307-786 |
| Cow position: | chr9:49303632-49303175 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 328 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 129, 100 |
| Conread position: | 310-599 |
| Cow position: | chr9:56807342-56807050 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 101, 78 |
| Conread position: | 311-552 |
| Cow position: | chr9:26736781-26737037 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 311-589 |
| Cow position: | chr9:52033724-52034003 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 93, 107 |
| Conread position: | 311-772 |
| Cow position: | chr9:27935406-27935869 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 241 |
| Conread position: | 312-772 |
| Cow position: | chr9:38677174-38677633 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 239 |
| Conread position: | 312-773 |
| Cow position: | chr9:54925578-54926025 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 315 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 106, 52 |
| Conread position: | 312-773 |
| Cow position: | chr9:62736763-62736318 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 307 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 11, 115 |
| Conread position: | 312-784 |
| Cow position: | chr9:4666211-4666680 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 94 |
| Conread position: | 316-592 |
| Cow position: | chr9:22089551-22089823 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 122, 84 |
| Conread position: | 316-772 |
| Cow position: | chr9:64015613-64015183 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 308 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 404, 98 |
| Conread position: | 317-771 |
| Cow position: | chr9:2871358-2871821 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 154 |
| Conread position: | 317-787 |
| Cow position: | chr9:22192314-22192778 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 302 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 104, 68 |
| Conread position: | 322-600 |
| Cow position: | chr9:4836301-4836015 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 102, 91 |
| Conread position: | 329-772 |
| Cow position: | chr9:17901519-17901085 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 30 |
| Conread position: | 330-772 |
| Cow position: | chr9:9014132-9014560 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 198 |
| Conread position: | 331-718 |
| Cow position: | chr9:4649556-4649171 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 279 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 128, 25 |
| Conread position: | 331-772 |
| Cow position: | chr9:25034515-25034072 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 220 |
| Conread position: | 343-580 |
| Cow position: | chr9:32296189-32295951 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 31, 77 |
| Conread position: | 347-761 |
| Cow position: | chr9:60462836-60462457 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 86, 20 |
| Conread position: | 351-761 |
| Cow position: | chr9:20176647-20176230 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 298 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 48, 270 |
| Conread position: | 351-772 |
| Cow position: | chr9:25903574-25904012 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 314 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 63, 120 |
| Conread position: | 352-770 |
| Cow position: | chr9:1075119-1074689 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 291 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 62, 134 |
| Conread position: | 352-771 |
| Cow position: | chr9:35595009-35594594 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 282 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 65, 56 |
| Conread position: | 362-580 |
| Cow position: | chr9:3372236-3372020 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 72, 51 |
| Conread position: | 373-772 |
| Cow position: | chr9:2679360-2679753 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 61, 16 |
| Conread position: | 393-761 |
| Cow position: | chr9:26553697-26554034 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 47, 23 |
| Conread position: | 393-771 |
| Cow position: | chr9:1637974-1638342 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 264 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 58, 20 |
| Conread position: | 400-727 |
| Cow position: | chr9:59447633-59447953 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 16, 46 |
| Conread position: | 400-771 |
| Cow position: | chr9:9562920-9562561 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 91, 132 |
| Conread position: | 405-601 |
| Cow position: | chr9:57677290-57677489 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 13, 38 |
| Conread position: | 421-772 |
| Cow position: | chr9:22436117-22436442 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 68, 35 |
| Conread position: | 429-772 |
| Cow position: | chr9:26567758-26568091 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 5 |
| Conread position: | 433-600 |
| Cow position: | chr9:43664875-43665035 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 40, 64 |
| Conread position: | 434-585 |
| Cow position: | chr9:18211413-18211561 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 55, 91 |
| Conread position: | 434-696 |
| Cow position: | chr9:30191223-30190974 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 207, 59 |
| Conread position: | 434-761 |
| Cow position: | chr9:7105270-7104951 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 232 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 56, 108 |
| Conread position: | 434-772 |
| Cow position: | chr9:45874684-45875006 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 250 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 36, 16 |
| Conread position: | 434-781 |
| Cow position: | chr9:3224474-3224144 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 235, 78 |
| Conread position: | 438-771 |
| Cow position: | chr9:2210923-2211273 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 53, 12 |
| Conread position: | 438-772 |
| Cow position: | chr9:2172114-2172431 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 246 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 53, 22 |
| Conread position: | 438-772 |
| Cow position: | chr9:7003894-7004222 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 238 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 51, 18 |
| Conread position: | 438-772 |
| Cow position: | chr9:50094076-50093748 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 110 |
| Conread position: | 442-773 |
| Cow position: | chr9:4717350-4717658 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 319, 22 |
| Conread position: | 442-773 |
| Cow position: | chr9:27036080-27036390 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 238 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 49, 29 |
| Conread position: | 443-601 |
| Cow position: | chr9:49515307-49515153 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 444-602 |
| Cow position: | chr9:3544049-3544209 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 49, 107 |
| Conread position: | 454-772 |
| Cow position: | chr9:12912956-12913266 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 71 |
| Conread position: | 477-786 |
| Cow position: | chr9:8781708-8781407 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 15, 70 |
| Conread position: | 603-739 |
| Cow position: | chr9:12113800-12113942 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 41, 131 |
| Conread position: | 603-767 |
| Cow position: | chr9:26737224-26737394 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 41, 122 |
| Conread position: | 604-772 |
| Cow position: | chr9:10976424-10976604 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 18, 136 |
| Conread position: | 646-787 |
| Cow position: | chr9:28000879-28001028 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
Show alignments to all cow chromosomes.