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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8060J09.5
        

               
Conread position:
               
125-430
               

               
Cow position:
               
chr17:27780564-27780860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 44
               

               
Conread position:
               
153-464
               

               
Cow position:
               
chr17:6423495-6423808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
5, 15
               

               
Conread position:
               
157-464
               

               
Cow position:
               
chr17:9746250-9746560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 84
               

               
Conread position:
               
158-458
               

               
Cow position:
               
chr17:9697963-9697663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
9, 45
               

               
Conread position:
               
162-439
               

               
Cow position:
               
chr17:13672335-13672052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
165-464
               

               
Cow position:
               
chr17:7697802-7698095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 74
               

               
Conread position:
               
166-458
               

               
Cow position:
               
chr17:16307128-16307412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
49, 128
               

               
Conread position:
               
173-419
               

               
Cow position:
               
chr17:20815123-20815371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
30, 138
               

               
Conread position:
               
175-459
               

               
Cow position:
               
chr17:28539794-28540069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 34
               

               
Conread position:
               
177-459
               

               
Cow position:
               
chr17:31481285-31481006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 33
               

               
Conread position:
               
178-418
               

               
Cow position:
               
chr17:7041182-7040949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
39, 16
               

               
Conread position:
               
178-464
               

               
Cow position:
               
chr17:21031543-21031831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
9, 117
               

               
Conread position:
               
180-459
               

               
Cow position:
               
chr17:16371016-16371295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 8
               

               
Conread position:
               
180-462
               

               
Cow position:
               
chr17:4824256-4824532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
9, 121
               

               
Conread position:
               
181-380
               

               
Cow position:
               
chr17:12477683-12477884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 6
               

               
Conread position:
               
181-438
               

               
Cow position:
               
chr17:7132695-7132431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
181-459
               

               
Cow position:
               
chr17:39771160-39771432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
36, 28
               

               
Conread position:
               
187-479
               

               
Cow position:
               
chr17:3471191-3471479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 22
               

               
Conread position:
               
188-459
               

               
Cow position:
               
chr17:966968-966707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
191-404
               

               
Cow position:
               
chr17:21710278-21710489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
26, 103
               

               
Conread position:
               
191-496
               

               
Cow position:
               
chr17:6848580-6848875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
13, 52
               

               
Conread position:
               
205-428
               

               
Cow position:
               
chr17:10446703-10446926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
12, 164
               

               
Conread position:
               
208-364
               

               
Cow position:
               
chr17:3095615-3095773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
208-414
               

               
Cow position:
               
chr17:30999566-30999760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
208-430
               

               
Cow position:
               
chr17:11035711-11035931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
9, 58
               

               
Conread position:
               
208-436
               

               
Cow position:
               
chr17:13989384-13989158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
9, 85
               

               
Conread position:
               
208-440
               

               
Cow position:
               
chr17:11172825-11172599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
9, 80
               

               
Conread position:
               
208-440
               

               
Cow position:
               
chr17:20090831-20090613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 84
               

               
Conread position:
               
208-459
               

               
Cow position:
               
chr17:11618370-11618627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 114
               

               
Conread position:
               
208-464
               

               
Cow position:
               
chr17:2810411-2810672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
9, 132
               

               
Conread position:
               
208-464
               

               
Cow position:
               
chr17:18720658-18720403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
9, 82
               

               
Conread position:
               
208-491
               

               
Cow position:
               
chr17:20848321-20848595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
9, 21
               

               
Conread position:
               
208-491
               

               
Cow position:
               
chr17:26183012-26183301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 85
               

               
Conread position:
               
209-342
               

               
Cow position:
               
chr17:15376114-15376244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
8, 84
               

               
Conread position:
               
209-345
               

               
Cow position:
               
chr17:3153981-3153843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
209-347
               

               
Cow position:
               
chr17:16415041-16414905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 56
               

               
Conread position:
               
209-363
               

               
Cow position:
               
chr17:7423650-7423497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
8, 87
               

               
Conread position:
               
209-367
               

               
Cow position:
               
chr17:4685357-4685521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 113
               

               
Conread position:
               
209-370
               

               
Cow position:
               
chr17:25875203-25875362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
8, 84
               

               
Conread position:
               
209-372
               

               
Cow position:
               
chr17:12325955-12325796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
8, 79
               

               
Conread position:
               
209-374
               

               
Cow position:
               
chr17:29074550-29074381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 118
               

               
Conread position:
               
209-381
               

               
Cow position:
               
chr17:12054511-12054682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
69, 83
               

               
Conread position:
               
209-419
               

               
Cow position:
               
chr17:21419223-21419435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
8, 84
               

               
Conread position:
               
209-440
               

               
Cow position:
               
chr17:7810948-7810725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
8, 138
               

               
Conread position:
               
209-445
               

               
Cow position:
               
chr17:21004040-21003805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
8, 110
               

               
Conread position:
               
209-452
               

               
Cow position:
               
chr17:7760672-7760437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 87
               

               
Conread position:
               
209-455
               

               
Cow position:
               
chr17:11156702-11156458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 136
               

               
Conread position:
               
209-456
               

               
Cow position:
               
chr17:2839681-2839945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
8, 157
               

               
Conread position:
               
209-457
               

               
Cow position:
               
chr17:20072283-20072057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
209-459
               

               
Cow position:
               
chr17:19891406-19891663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
7, 186
               

               
Conread position:
               
209-459
               

               
Cow position:
               
chr17:25189071-25189328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
70, 234
               

               
Conread position:
               
209-459
               

               
Cow position:
               
chr17:38837355-38837607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
209-461
               

               
Cow position:
               
chr17:6936873-6936632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
8, 83
               

               
Conread position:
               
209-464
               

               
Cow position:
               
chr17:1410450-1410194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 23
               

               
Conread position:
               
209-464
               

               
Cow position:
               
chr17:5006698-5006442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
49, 5
               

               
Conread position:
               
209-464
               

               
Cow position:
               
chr17:15333919-15333666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
69, 107
               

               
Conread position:
               
209-464
               

               
Cow position:
               
chr17:20157408-20157651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
8, 23
               

               
Conread position:
               
209-464
               

               
Cow position:
               
chr17:24787230-24786979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
11, 134
               

               
Conread position:
               
209-464
               

               
Cow position:
               
chr17:30718628-30718374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 84
               

               
Conread position:
               
209-479
               

               
Cow position:
               
chr17:16446638-16446376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
8, 52
               

               
Conread position:
               
209-496
               

               
Cow position:
               
chr17:3781835-3782126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 88
               

               
Conread position:
               
209-496
               

               
Cow position:
               
chr17:21755650-21755354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 100
               

               
Conread position:
               
209-516
               

               
Cow position:
               
chr17:25542021-25541721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
10, 31
               

               
Conread position:
               
210-341
               

               
Cow position:
               
chr17:17982984-17982856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
68, 49
               

               
Conread position:
               
210-353
               

               
Cow position:
               
chr17:24983561-24983417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
210-368
               

               
Cow position:
               
chr17:15354775-15354930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
210-381
               

               
Cow position:
               
chr17:40312514-40312687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
210-408
               

               
Cow position:
               
chr17:10220273-10220463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
210-415
               

               
Cow position:
               
chr17:35180630-35180831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 63
               

               
Conread position:
               
210-428
               

               
Cow position:
               
chr17:25168102-25168322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
17, 206
               

               
Conread position:
               
210-428
               

               
Cow position:
               
chr17:43527770-43527975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
73, 90
               

               
Conread position:
               
210-439
               

               
Cow position:
               
chr17:6391773-6391995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
68, 103
               

               
Conread position:
               
210-440
               

               
Cow position:
               
chr17:18495718-18495500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
19, 58
               

               
Conread position:
               
210-453
               

               
Cow position:
               
chr17:553175-552930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
65, 22
               

               
Conread position:
               
210-458
               

               
Cow position:
               
chr17:1526564-1526313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
68, 37
               

               
Conread position:
               
210-458
               

               
Cow position:
               
chr17:5246689-5246932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 18
               

               
Conread position:
               
210-459
               

               
Cow position:
               
chr17:15363768-15363523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
68, 18
               

               
Conread position:
               
210-459
               

               
Cow position:
               
chr17:22775178-22775413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
68, 32
               

               
Conread position:
               
210-464
               

               
Cow position:
               
chr17:11832347-11832071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
16, 207
               

               
Conread position:
               
210-464
               

               
Cow position:
               
chr17:11839490-11839759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 75
               

               
Conread position:
               
210-464
               

               
Cow position:
               
chr17:15188286-15188031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
68, 42
               

               
Conread position:
               
210-464
               

               
Cow position:
               
chr17:20870304-20870054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
16, 42
               

               
Conread position:
               
210-464
               

               
Cow position:
               
chr17:22563976-22564232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 76
               

               
Conread position:
               
210-464
               

               
Cow position:
               
chr17:40331558-40331811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
68, 82
               

               
Conread position:
               
210-465
               

               
Cow position:
               
chr17:8544099-8544349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 81
               

               
Conread position:
               
210-466
               

               
Cow position:
               
chr17:42419522-42419766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
210-469
               

               
Cow position:
               
chr17:43717517-43717270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
68, 20
               

               
Conread position:
               
210-491
               

               
Cow position:
               
chr17:923669-923952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 86
               

               
Conread position:
               
210-491
               

               
Cow position:
               
chr17:11397459-11397740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
68, 170
               

               
Conread position:
               
210-491
               

               
Cow position:
               
chr17:17222133-17222413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
20, 86
               

               
Conread position:
               
210-491
               

               
Cow position:
               
chr17:22806745-22806470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
66, 18
               

               
Conread position:
               
211-459
               

               
Cow position:
               
chr17:17179830-17180088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
157, 62
               

               
Conread position:
               
211-459
               

               
Cow position:
               
chr17:21599889-21599644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
5, 53
               

               
Conread position:
               
211-464
               

               
Cow position:
               
chr17:21313011-21312765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 81
               

               
Conread position:
               
211-479
               

               
Cow position:
               
chr17:34595734-34596000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 18
               

               
Conread position:
               
211-491
               

               
Cow position:
               
chr17:14249230-14248937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
27, 120
               

               
Conread position:
               
212-342
               

               
Cow position:
               
chr17:10432401-10432277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
5, 17
               

               
Conread position:
               
212-348
               

               
Cow position:
               
chr17:30329488-30329623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
5, 82
               

               
Conread position:
               
212-415
               

               
Cow position:
               
chr17:6566263-6566460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
11, 82
               

               
Conread position:
               
212-433
               

               
Cow position:
               
chr17:8926425-8926203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
66, 132
               

               
Conread position:
               
212-438
               

               
Cow position:
               
chr17:13236932-13236707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
5, 85
               

               
Conread position:
               
212-440
               

               
Cow position:
               
chr17:24553798-24554026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
5, 134
               

               
Conread position:
               
212-464
               

               
Cow position:
               
chr17:38646859-38647105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
66, 80
               

               
Conread position:
               
212-491
               

               
Cow position:
               
chr17:12059295-12059020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 16
               

               
Conread position:
               
213-435
               

               
Cow position:
               
chr17:6858596-6858373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
213-459
               

               
Cow position:
               
chr17:41393917-41393676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
65, 81
               

               
Conread position:
               
213-459
               

               
Cow position:
               
chr17:41400174-41399933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
65, 81
               

               
Conread position:
               
213-464
               

               
Cow position:
               
chr17:5228939-5229186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
65, 81
               

               
Conread position:
               
213-512
               

               
Cow position:
               
chr17:12108600-12108897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 23
               

               
Conread position:
               
214-358
               

               
Cow position:
               
chr17:1026076-1026217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
64, 76
               

               
Conread position:
               
214-398
               

               
Cow position:
               
chr17:25078196-25078024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
172, 23
               

               
Conread position:
               
214-406
               

               
Cow position:
               
chr17:3182787-3182599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
64, 14
               

               
Conread position:
               
214-413
               

               
Cow position:
               
chr17:20835390-20835589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
64, 129
               

               
Conread position:
               
214-429
               

               
Cow position:
               
chr17:24973747-24973960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
10, 103
               

               
Conread position:
               
214-430
               

               
Cow position:
               
chr17:19455506-19455302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
62, 48
               

               
Conread position:
               
214-433
               

               
Cow position:
               
chr17:37342677-37342469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
207, 38
               

               
Conread position:
               
214-434
               

               
Cow position:
               
chr17:20653098-20652887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
40, 54
               

               
Conread position:
               
214-435
               

               
Cow position:
               
chr17:27819098-27819316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
62, 14
               

               
Conread position:
               
214-438
               

               
Cow position:
               
chr17:37857938-37857706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
8, 98
               

               
Conread position:
               
214-440
               

               
Cow position:
               
chr17:12216280-12216053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 138
               

               
Conread position:
               
214-447
               

               
Cow position:
               
chr17:21363205-21363433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
64, 14
               

               
Conread position:
               
214-451
               

               
Cow position:
               
chr17:24077201-24077438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 23
               

               
Conread position:
               
214-453
               

               
Cow position:
               
chr17:39012515-39012756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
64, 226
               

               
Conread position:
               
214-459
               

               
Cow position:
               
chr17:1653891-1653653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
214-459
               

               
Cow position:
               
chr17:5896113-5895871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 14
               

               
Conread position:
               
214-459
               

               
Cow position:
               
chr17:33999247-33999012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
64, 78
               

               
Conread position:
               
214-462
               

               
Cow position:
               
chr17:25097260-25097504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
214-463
               

               
Cow position:
               
chr17:11296432-11296692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 165
               

               
Conread position:
               
214-464
               

               
Cow position:
               
chr17:11216086-11215844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 63
               

               
Conread position:
               
214-489
               

               
Cow position:
               
chr17:7436963-7437241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
14, 52
               

               
Conread position:
               
214-491
               

               
Cow position:
               
chr17:17410095-17410366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
64, 41
               

               
Conread position:
               
214-491
               

               
Cow position:
               
chr17:21293248-21292969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 88
               

               
Conread position:
               
214-495
               

               
Cow position:
               
chr17:31231317-31231040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 130
               

               
Conread position:
               
214-501
               

               
Cow position:
               
chr17:9778048-9778325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 64
               

               
Conread position:
               
214-508
               

               
Cow position:
               
chr17:14026118-14025821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
129, 41
               

               
Conread position:
               
215-402
               

               
Cow position:
               
chr17:31585232-31585414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
63, 34
               

               
Conread position:
               
215-464
               

               
Cow position:
               
chr17:26224316-26224555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 13
               

               
Conread position:
               
216-313
               

               
Cow position:
               
chr17:32977175-32977078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-342
               

               
Cow position:
               
chr17:23517368-23517246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
216-347
               

               
Cow position:
               
chr17:27770158-27770035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-348
               

               
Cow position:
               
chr17:9057167-9057037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
6, 77
               

               
Conread position:
               
216-348
               

               
Cow position:
               
chr17:11655225-11655353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
104, 50
               

               
Conread position:
               
216-349
               

               
Cow position:
               
chr17:30413835-30413969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-352
               

               
Cow position:
               
chr17:33370412-33370277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 76
               

               
Conread position:
               
216-356
               

               
Cow position:
               
chr17:13124937-13124796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
62, 130
               

               
Conread position:
               
216-356
               

               
Cow position:
               
chr17:40406103-40406243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
62, 129
               

               
Conread position:
               
216-368
               

               
Cow position:
               
chr17:26757529-26757683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
216-371
               

               
Cow position:
               
chr17:8644836-8644990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
62, 46
               

               
Conread position:
               
216-374
               

               
Cow position:
               
chr17:12759841-12759682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-375
               

               
Cow position:
               
chr17:17405937-17406093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
62, 104
               

               
Conread position:
               
216-375
               

               
Cow position:
               
chr17:21039077-21039233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
62, 31
               

               
Conread position:
               
216-379
               

               
Cow position:
               
chr17:14265760-14265595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-381
               

               
Cow position:
               
chr17:26818653-26818489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-382
               

               
Cow position:
               
chr17:23680783-23680946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-386
               

               
Cow position:
               
chr17:37773733-37773570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
216-390
               

               
Cow position:
               
chr17:14088528-14088353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-391
               

               
Cow position:
               
chr17:16117630-16117452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
216-393
               

               
Cow position:
               
chr17:1358998-1358830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
216-393
               

               
Cow position:
               
chr17:3258296-3258468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
216-394
               

               
Cow position:
               
chr17:5695148-5694973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-404
               

               
Cow position:
               
chr17:3683858-3683675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
173, 12
               

               
Conread position:
               
216-405
               

               
Cow position:
               
chr17:27142555-27142744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
60, 129
               

               
Conread position:
               
216-406
               

               
Cow position:
               
chr17:24876937-24877128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-407
               

               
Cow position:
               
chr17:1328171-1327984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
57, 12
               

               
Conread position:
               
216-409
               

               
Cow position:
               
chr17:5000775-5000590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
216-409
               

               
Cow position:
               
chr17:16869478-16869292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 45
               

               
Conread position:
               
216-413
               

               
Cow position:
               
chr17:16448132-16448331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
216-414
               

               
Cow position:
               
chr17:33052662-33052853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-415
               

               
Cow position:
               
chr17:36817741-36817936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
153, 61
               

               
Conread position:
               
216-415
               

               
Cow position:
               
chr17:37163728-37163526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-417
               

               
Cow position:
               
chr17:17452803-17452608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
76, 32
               

               
Conread position:
               
216-420
               

               
Cow position:
               
chr17:27667395-27667188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
62, 139
               

               
Conread position:
               
216-426
               

               
Cow position:
               
chr17:3306667-3306872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-427
               

               
Cow position:
               
chr17:3843286-3843486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
216-427
               

               
Cow position:
               
chr17:21874517-21874300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
99, 104
               

               
Conread position:
               
216-427
               

               
Cow position:
               
chr17:23337215-23337010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
8, 77
               

               
Conread position:
               
216-428
               

               
Cow position:
               
chr17:27162451-27162656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
59, 76
               

               
Conread position:
               
216-429
               

               
Cow position:
               
chr17:6155840-6156049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
62, 73
               

               
Conread position:
               
216-430
               

               
Cow position:
               
chr17:17951042-17951250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 89
               

               
Conread position:
               
216-430
               

               
Cow position:
               
chr17:20083713-20083511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-431
               

               
Cow position:
               
chr17:4606769-4606967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
60, 23
               

               
Conread position:
               
216-432
               

               
Cow position:
               
chr17:5041877-5041670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
7, 28
               

               
Conread position:
               
216-432
               

               
Cow position:
               
chr17:7890380-7890160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 49
               

               
Conread position:
               
216-432
               

               
Cow position:
               
chr17:23101412-23101195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
62, 130
               

               
Conread position:
               
216-433
               

               
Cow position:
               
chr17:5380765-5380983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
10, 44
               

               
Conread position:
               
216-433
               

               
Cow position:
               
chr17:29951342-29951554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 129
               

               
Conread position:
               
216-434
               

               
Cow position:
               
chr17:1568377-1568158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 21
               

               
Conread position:
               
216-435
               

               
Cow position:
               
chr17:14051303-14051084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
62, 176
               

               
Conread position:
               
216-436
               

               
Cow position:
               
chr17:33291011-33290802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
114, 12
               

               
Conread position:
               
216-437
               

               
Cow position:
               
chr17:5997296-5997082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 149
               

               
Conread position:
               
216-437
               

               
Cow position:
               
chr17:32651415-32651639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 91
               

               
Conread position:
               
216-437
               

               
Cow position:
               
chr17:34864369-34864589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
216-438
               

               
Cow position:
               
chr17:2079559-2079779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
52, 76
               

               
Conread position:
               
216-438
               

               
Cow position:
               
chr17:7821241-7821017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
14, 197
               

               
Conread position:
               
216-438
               

               
Cow position:
               
chr17:25590437-25590218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
24, 12
               

               
Conread position:
               
216-438
               

               
Cow position:
               
chr17:25707754-25707975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
62, 153
               

               
Conread position:
               
216-438
               

               
Cow position:
               
chr17:25755583-25755810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
60, 129
               

               
Conread position:
               
216-438
               

               
Cow position:
               
chr17:31232131-31231913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
216-438
               

               
Cow position:
               
chr17:37415101-37414878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
62, 129
               

               
Conread position:
               
216-439
               

               
Cow position:
               
chr17:16895495-16895287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
216-439
               

               
Cow position:
               
chr17:18884548-18884317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
57, 13
               

               
Conread position:
               
216-439
               

               
Cow position:
               
chr17:44924376-44924168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
62, 70
               

               
Conread position:
               
216-440
               

               
Cow position:
               
chr17:2584495-2584719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
216-440
               

               
Cow position:
               
chr17:4225692-4225475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
62, 81
               

               
Conread position:
               
216-440
               

               
Cow position:
               
chr17:5745444-5745234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-440
               

               
Cow position:
               
chr17:8279908-8279687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
216-440
               

               
Cow position:
               
chr17:11381921-11381699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
42, 90
               

               
Conread position:
               
216-440
               

               
Cow position:
               
chr17:12289616-12289395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-440
               

               
Cow position:
               
chr17:23880029-23879808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
56, 148
               

               
Conread position:
               
216-440
               

               
Cow position:
               
chr17:24608648-24608865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
11, 36
               

               
Conread position:
               
216-440
               

               
Cow position:
               
chr17:25900998-25901216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
216-440
               

               
Cow position:
               
chr17:29363564-29363359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
62, 69
               

               
Conread position:
               
216-441
               

               
Cow position:
               
chr17:32399723-32399495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-443
               

               
Cow position:
               
chr17:26084834-26085056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
216-445
               

               
Cow position:
               
chr17:1061263-1061036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
62, 54
               

               
Conread position:
               
216-445
               

               
Cow position:
               
chr17:6263707-6263935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
62, 200
               

               
Conread position:
               
216-445
               

               
Cow position:
               
chr17:28130246-28130018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 36
               

               
Conread position:
               
216-445
               

               
Cow position:
               
chr17:30204454-30204683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 77
               

               
Conread position:
               
216-446
               

               
Cow position:
               
chr17:40642291-40642061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
62, 196
               

               
Conread position:
               
216-448
               

               
Cow position:
               
chr17:8214722-8214943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
11, 128
               

               
Conread position:
               
216-450
               

               
Cow position:
               
chr17:4612278-4612047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
63, 78
               

               
Conread position:
               
216-451
               

               
Cow position:
               
chr17:20361662-20361896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
63, 92
               

               
Conread position:
               
216-451
               

               
Cow position:
               
chr17:31263503-31263266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-451
               

               
Cow position:
               
chr17:36533173-36533402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
60, 100
               

               
Conread position:
               
216-451
               

               
Cow position:
               
chr17:43008517-43008753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-452
               

               
Cow position:
               
chr17:11304835-11305066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
12, 77
               

               
Conread position:
               
216-452
               

               
Cow position:
               
chr17:18245874-18246113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
62, 80
               

               
Conread position:
               
216-452
               

               
Cow position:
               
chr17:26764813-26765045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
63, 17
               

               
Conread position:
               
216-453
               

               
Cow position:
               
chr17:32279108-32278874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 101
               

               
Conread position:
               
216-454
               

               
Cow position:
               
chr17:45881700-45881939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
216-455
               

               
Cow position:
               
chr17:5280843-5280613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
62, 47
               

               
Conread position:
               
216-455
               

               
Cow position:
               
chr17:11056576-11056333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 73
               

               
Conread position:
               
216-455
               

               
Cow position:
               
chr17:15067824-15067590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
65, 14
               

               
Conread position:
               
216-456
               

               
Cow position:
               
chr17:13143891-13143652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-457
               

               
Cow position:
               
chr17:4721286-4721531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
133, 61
               

               
Conread position:
               
216-457
               

               
Cow position:
               
chr17:17059239-17059461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-457
               

               
Cow position:
               
chr17:18109287-18109047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
79, 62
               

               
Conread position:
               
216-457
               

               
Cow position:
               
chr17:18494716-18494481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
49, 33
               

               
Conread position:
               
216-458
               

               
Cow position:
               
chr17:242434-242676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 77
               

               
Conread position:
               
216-458
               

               
Cow position:
               
chr17:4473004-4472777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-458
               

               
Cow position:
               
chr17:5255577-5255335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
62, 219
               

               
Conread position:
               
216-458
               

               
Cow position:
               
chr17:5898725-5898494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
216-458
               

               
Cow position:
               
chr17:21335899-21335654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 135
               

               
Conread position:
               
216-458
               

               
Cow position:
               
chr17:40741446-40741686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 108
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr17:1080803-1081032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
158, 12
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr17:3152524-3152284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr17:5330374-5330623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
63, 165
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr17:8079116-8079351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 38
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr17:9565108-9565346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 78
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr17:10528942-10528689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr17:11171595-11171832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr17:12929744-12929498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr17:14848724-14848502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
211, 61
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr17:19998934-19999176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 158
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr17:20033117-20032873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 221
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr17:24580500-24580255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr17:25796541-25796298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
62, 218
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr17:25815407-25815641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
7, 72
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr17:26230739-26230993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr17:26514514-26514755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
62, 169
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr17:27274361-27274601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
63, 76
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr17:27679445-27679198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 197
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr17:33121887-33122131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
54, 12
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr17:34079299-34079072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr17:36746519-36746288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 52
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr17:38200967-38200725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
14, 215
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr17:38832841-38833080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr17:42347422-42347185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 97
               

               
Conread position:
               
216-460
               

               
Cow position:
               
chr17:1020768-1020521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-460
               

               
Cow position:
               
chr17:32989292-32989517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
223, 17
               

               
Conread position:
               
216-460
               

               
Cow position:
               
chr17:32993814-32993583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
223, 17
               

               
Conread position:
               
216-461
               

               
Cow position:
               
chr17:21628281-21628520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 92
               

               
Conread position:
               
216-461
               

               
Cow position:
               
chr17:40771629-40771877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 222
               

               
Conread position:
               
216-462
               

               
Cow position:
               
chr17:5224202-5224444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
121, 63
               

               
Conread position:
               
216-462
               

               
Cow position:
               
chr17:11281308-11281060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 48
               

               
Conread position:
               
216-462
               

               
Cow position:
               
chr17:33288855-33288615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
81, 62
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr17:1275318-1275571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
55, 206
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr17:1295772-1295527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 78
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr17:1493357-1493105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 42
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr17:3387093-3387317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
128, 50
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr17:5733649-5733424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr17:5767713-5767951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr17:9117442-9117688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 135
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr17:13244227-13244001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr17:15103089-15102850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
62, 129
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr17:21115149-21114910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
217, 62
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr17:21495176-21495422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr17:25128550-25128309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
62, 41
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr17:27429377-27429623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 129
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr17:27765080-27765317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
208, 61
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr17:29715387-29715154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr17:30713152-30713389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
62, 42
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr17:32273883-32273643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
222, 23
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr17:32419319-32419072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
62, 140
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr17:34316909-34316670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr17:35126513-35126754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
216, 62
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr17:40421468-40421715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-465
               

               
Cow position:
               
chr17:20022718-20022469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
60, 76
               

               
Conread position:
               
216-465
               

               
Cow position:
               
chr17:30665072-30665317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-466
               

               
Cow position:
               
chr17:26627843-26627599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-477
               

               
Cow position:
               
chr17:21620513-21620771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
62, 205
               

               
Conread position:
               
216-479
               

               
Cow position:
               
chr17:1783807-1783544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
62, 16
               

               
Conread position:
               
216-479
               

               
Cow position:
               
chr17:9079387-9079144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
250, 61
               

               
Conread position:
               
216-480
               

               
Cow position:
               
chr17:41029751-41030012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
216-481
               

               
Cow position:
               
chr17:17496326-17496593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
62, 216
               

               
Conread position:
               
216-481
               

               
Cow position:
               
chr17:18490332-18490599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
133, 97
               

               
Conread position:
               
216-482
               

               
Cow position:
               
chr17:34948439-34948698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
7, 101
               

               
Conread position:
               
216-484
               

               
Cow position:
               
chr17:32027663-32027391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 243
               

               
Conread position:
               
216-490
               

               
Cow position:
               
chr17:11101995-11101731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 96
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chr17:1035805-1035524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 103
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chr17:13940523-13940249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
62, 92
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chr17:18860921-18860648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chr17:20800615-20800886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
62, 84
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chr17:20839759-20839493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chr17:21739085-21738801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 218
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chr17:21959880-21959615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chr17:25608707-25608435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
67, 227
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chr17:41290218-41289949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 12
               

               
Conread position:
               
216-494
               

               
Cow position:
               
chr17:44232921-44232636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 169
               

               
Conread position:
               
216-495
               

               
Cow position:
               
chr17:21870939-21870654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
62, 92
               

               
Conread position:
               
216-496
               

               
Cow position:
               
chr17:36331167-36330879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
62, 44
               

               
Conread position:
               
216-497
               

               
Cow position:
               
chr17:24549971-24550254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 17
               

               
Conread position:
               
216-501
               

               
Cow position:
               
chr17:12220139-12219851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
62, 99
               

               
Conread position:
               
216-503
               

               
Cow position:
               
chr17:25181350-25181057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
62, 234
               

               
Conread position:
               
216-508
               

               
Cow position:
               
chr17:5423272-5422980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-508
               

               
Cow position:
               
chr17:13922272-13922572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 137
               

               
Conread position:
               
216-510
               

               
Cow position:
               
chr17:18592238-18592533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
13, 130
               

               
Conread position:
               
217-358
               

               
Cow position:
               
chr17:41995592-41995734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 16
               

               
Conread position:
               
217-404
               

               
Cow position:
               
chr17:3498864-3498680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
59, 76
               

               
Conread position:
               
217-431
               

               
Cow position:
               
chr17:11837222-11837429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
54, 99
               

               
Conread position:
               
217-440
               

               
Cow position:
               
chr17:32457780-32457549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 76
               

               
Conread position:
               
217-451
               

               
Cow position:
               
chr17:31293-31528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
217-451
               

               
Cow position:
               
chr17:8223552-8223787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
217-457
               

               
Cow position:
               
chr17:9853786-9854021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
65, 137
               

               
Conread position:
               
217-457
               

               
Cow position:
               
chr17:18824589-18824826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
6, 79
               

               
Conread position:
               
217-458
               

               
Cow position:
               
chr17:5514559-5514798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 39
               

               
Conread position:
               
217-458
               

               
Cow position:
               
chr17:24883764-24883533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
62, 29
               

               
Conread position:
               
217-464
               

               
Cow position:
               
chr17:20912698-20912932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
59, 11
               

               
Conread position:
               
217-464
               

               
Cow position:
               
chr17:24587418-24587668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 128
               

               
Conread position:
               
217-464
               

               
Cow position:
               
chr17:32471991-32471737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
61, 12
               

               
Conread position:
               
217-495
               

               
Cow position:
               
chr17:32366085-32366358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
61, 20
               

               
Conread position:
               
218-332
               

               
Cow position:
               
chr17:11912899-11912788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
218-380
               

               
Cow position:
               
chr17:36533462-36533616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
218-399
               

               
Cow position:
               
chr17:21412446-21412267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
60, 127
               

               
Conread position:
               
218-409
               

               
Cow position:
               
chr17:38116213-38116401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
60, 68
               

               
Conread position:
               
218-415
               

               
Cow position:
               
chr17:23063512-23063710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
10, 61
               

               
Conread position:
               
218-426
               

               
Cow position:
               
chr17:21017595-21017802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
60, 127
               

               
Conread position:
               
218-431
               

               
Cow position:
               
chr17:15132964-15133159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
15, 60
               

               
Conread position:
               
218-436
               

               
Cow position:
               
chr17:10649650-10649857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
97, 60
               

               
Conread position:
               
218-458
               

               
Cow position:
               
chr17:29472276-29472505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
60, 94
               

               
Conread position:
               
218-458
               

               
Cow position:
               
chr17:30529735-30529507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
131, 47
               

               
Conread position:
               
218-459
               

               
Cow position:
               
chr17:2662210-2662463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 103
               

               
Conread position:
               
218-459
               

               
Cow position:
               
chr17:21434928-21434687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
60, 127
               

               
Conread position:
               
218-459
               

               
Cow position:
               
chr17:21680569-21680812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 135
               

               
Conread position:
               
218-459
               

               
Cow position:
               
chr17:27795449-27795687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
60, 48
               

               
Conread position:
               
218-459
               

               
Cow position:
               
chr17:33403139-33402897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
67, 97
               

               
Conread position:
               
218-464
               

               
Cow position:
               
chr17:6624059-6624300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
218-464
               

               
Cow position:
               
chr17:8690639-8690397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 47
               

               
Conread position:
               
218-464
               

               
Cow position:
               
chr17:15684306-15684553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
60, 137
               

               
Conread position:
               
218-464
               

               
Cow position:
               
chr17:20993238-20992993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 69
               

               
Conread position:
               
218-464
               

               
Cow position:
               
chr17:21243985-21243743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
60, 10
               

               
Conread position:
               
218-465
               

               
Cow position:
               
chr17:27305960-27306205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
219-431
               

               
Cow position:
               
chr17:24490323-24490537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
59, 201
               

               
Conread position:
               
219-440
               

               
Cow position:
               
chr17:3466637-3466846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
219-454
               

               
Cow position:
               
chr17:4213557-4213776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
14, 129
               

               
Conread position:
               
219-458
               

               
Cow position:
               
chr17:7648022-7648250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
59, 73
               

               
Conread position:
               
219-459
               

               
Cow position:
               
chr17:1256702-1256461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
59, 133
               

               
Conread position:
               
219-459
               

               
Cow position:
               
chr17:38614758-38614999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
59, 75
               

               
Conread position:
               
219-461
               

               
Cow position:
               
chr17:33271877-33271639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
123, 49
               

               
Conread position:
               
219-476
               

               
Cow position:
               
chr17:2034347-2034586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
248, 59
               

               
Conread position:
               
219-479
               

               
Cow position:
               
chr17:11361985-11362245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
132, 58
               

               
Conread position:
               
220-438
               

               
Cow position:
               
chr17:25740753-25740970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
58, 74
               

               
Conread position:
               
220-459
               

               
Cow position:
               
chr17:15664472-15664716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
58, 67
               

               
Conread position:
               
220-464
               

               
Cow position:
               
chr17:15300067-15299828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
220-464
               

               
Cow position:
               
chr17:27047966-27048200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 39
               

               
Conread position:
               
220-508
               

               
Cow position:
               
chr17:9911566-9911846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 74
               

               
Conread position:
               
221-408
               

               
Cow position:
               
chr17:29040661-29040478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
55, 71
               

               
Conread position:
               
221-457
               

               
Cow position:
               
chr17:33933933-33933708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
57, 73
               

               
Conread position:
               
221-459
               

               
Cow position:
               
chr17:12270111-12269877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
221-502
               

               
Cow position:
               
chr17:35311225-35311508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 257
               

               
Conread position:
               
221-515
               

               
Cow position:
               
chr17:24824056-24824337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
57, 71
               

               
Conread position:
               
222-356
               

               
Cow position:
               
chr17:44108690-44108558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
56, 73
               

               
Conread position:
               
222-429
               

               
Cow position:
               
chr17:35184840-35185049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
56, 166
               

               
Conread position:
               
222-430
               

               
Cow position:
               
chr17:7251851-7252050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
56, 123
               

               
Conread position:
               
222-431
               

               
Cow position:
               
chr17:35990901-35991109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
43, 71
               

               
Conread position:
               
222-436
               

               
Cow position:
               
chr17:21207330-21207118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 123
               

               
Conread position:
               
222-436
               

               
Cow position:
               
chr17:29292562-29292351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
222-437
               

               
Cow position:
               
chr17:4436426-4436216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
222-438
               

               
Cow position:
               
chr17:43141911-43141698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
56, 66
               

               
Conread position:
               
222-443
               

               
Cow position:
               
chr17:20234032-20234253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 54
               

               
Conread position:
               
222-458
               

               
Cow position:
               
chr17:37482274-37482031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 223
               

               
Conread position:
               
222-459
               

               
Cow position:
               
chr17:25999921-26000160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
57, 96
               

               
Conread position:
               
222-459
               

               
Cow position:
               
chr17:26881532-26881292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
56, 129
               

               
Conread position:
               
222-459
               

               
Cow position:
               
chr17:41892263-41892022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
56, 130
               

               
Conread position:
               
222-459
               

               
Cow position:
               
chr17:43323952-43323726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
190, 26
               

               
Conread position:
               
222-462
               

               
Cow position:
               
chr17:30539442-30539217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
222-464
               

               
Cow position:
               
chr17:3503390-3503626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
13, 57
               

               
Conread position:
               
222-464
               

               
Cow position:
               
chr17:32950077-32950319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 98
               

               
Conread position:
               
222-464
               

               
Cow position:
               
chr17:33275945-33275704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
14, 106
               

               
Conread position:
               
222-469
               

               
Cow position:
               
chr17:17060877-17060625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
54, 45
               

               
Conread position:
               
222-507
               

               
Cow position:
               
chr17:12447593-12447312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
56, 25
               

               
Conread position:
               
223-351
               

               
Cow position:
               
chr17:7851041-7850910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
223-413
               

               
Cow position:
               
chr17:3518446-3518260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
55, 73
               

               
Conread position:
               
223-448
               

               
Cow position:
               
chr17:21697538-21697763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 211
               

               
Conread position:
               
223-459
               

               
Cow position:
               
chr17:11278226-11277989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
223-459
               

               
Cow position:
               
chr17:20889180-20889411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
55, 145
               

               
Conread position:
               
223-459
               

               
Cow position:
               
chr17:40289198-40288961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 191
               

               
Conread position:
               
223-464
               

               
Cow position:
               
chr17:21323103-21323320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
129, 42
               

               
Conread position:
               
223-479
               

               
Cow position:
               
chr17:5688542-5688301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
237, 67
               

               
Conread position:
               
224-370
               

               
Cow position:
               
chr17:20337596-20337740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 68
               

               
Conread position:
               
224-439
               

               
Cow position:
               
chr17:4601741-4601529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
54, 121
               

               
Conread position:
               
224-451
               

               
Cow position:
               
chr17:37480186-37479964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
54, 92
               

               
Conread position:
               
224-464
               

               
Cow position:
               
chr17:28285220-28284984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
219, 7
               

               
Conread position:
               
224-477
               

               
Cow position:
               
chr17:20358685-20358924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
55, 39
               

               
Conread position:
               
224-478
               

               
Cow position:
               
chr17:20215978-20216227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
177, 53
               

               
Conread position:
               
225-459
               

               
Cow position:
               
chr17:20780318-20780548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 91
               

               
Conread position:
               
225-461
               

               
Cow position:
               
chr17:40892957-40893193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
53, 67
               

               
Conread position:
               
225-464
               

               
Cow position:
               
chr17:11664783-11664541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
225-464
               

               
Cow position:
               
chr17:21973325-21973086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
53, 69
               

               
Conread position:
               
225-464
               

               
Cow position:
               
chr17:24761418-24761184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 91
               

               
Conread position:
               
225-465
               

               
Cow position:
               
chr17:18472984-18473215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
53, 85
               

               
Conread position:
               
226-406
               

               
Cow position:
               
chr17:32554217-32554039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
51, 126
               

               
Conread position:
               
226-408
               

               
Cow position:
               
chr17:24773492-24773667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
53, 79
               

               
Conread position:
               
227-437
               

               
Cow position:
               
chr17:33926316-33926111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
6, 66
               

               
Conread position:
               
227-464
               

               
Cow position:
               
chr17:12536658-12536421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
51, 69
               

               
Conread position:
               
229-427
               

               
Cow position:
               
chr17:11386326-11386522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
49, 63
               

               
Conread position:
               
229-440
               

               
Cow position:
               
chr17:19662994-19663207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
229-463
               

               
Cow position:
               
chr17:25611905-25612133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
49, 73
               

               
Conread position:
               
229-491
               

               
Cow position:
               
chr17:908558-908813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
51, 63
               

               
Conread position:
               
232-390
               

               
Cow position:
               
chr17:20269417-20269573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
232-464
               

               
Cow position:
               
chr17:1063004-1063220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
233-436
               

               
Cow position:
               
chr17:22781503-22781708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
233-458
               

               
Cow position:
               
chr17:14033828-14033602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 112
               

               
Conread position:
               
233-464
               

               
Cow position:
               
chr17:20932144-20932375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
14, 60
               

               
Conread position:
               
233-464
               

               
Cow position:
               
chr17:36790955-36791180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
156, 45
               

               
Conread position:
               
233-490
               

               
Cow position:
               
chr17:8837133-8836874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
45, 61
               

               
Conread position:
               
234-400
               

               
Cow position:
               
chr17:3442851-3442689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
44, 58
               

               
Conread position:
               
234-427
               

               
Cow position:
               
chr17:20126431-20126619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
237-439
               

               
Cow position:
               
chr17:12946546-12946342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
237-445
               

               
Cow position:
               
chr17:3577358-3577560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 108
               

               
Conread position:
               
237-462
               

               
Cow position:
               
chr17:34208000-34207773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
41, 77
               

               
Conread position:
               
237-464
               

               
Cow position:
               
chr17:29157238-29157463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
41, 58
               

               
Conread position:
               
237-491
               

               
Cow position:
               
chr17:36203670-36203408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
41, 55
               

               
Conread position:
               
239-432
               

               
Cow position:
               
chr17:8861363-8861171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
39, 104
               

               
Conread position:
               
239-440
               

               
Cow position:
               
chr17:28847846-28847645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
41, 113
               

               
Conread position:
               
240-459
               

               
Cow position:
               
chr17:24149000-24149223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
38, 81
               

               
Conread position:
               
240-479
               

               
Cow position:
               
chr17:44147151-44146914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
39, 16
               

               
Conread position:
               
240-491
               

               
Cow position:
               
chr17:38363148-38362910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
241-459
               

               
Cow position:
               
chr17:32221338-32221128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
37, 51
               

               
Conread position:
               
241-503
               

               
Cow position:
               
chr17:10271315-10271581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
37, 140
               

               
Conread position:
               
242-450
               

               
Cow position:
               
chr17:12278315-12278525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
36, 111
               

               
Conread position:
               
242-459
               

               
Cow position:
               
chr17:36268221-36268420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
36, 49
               

               
Conread position:
               
242-464
               

               
Cow position:
               
chr17:10459111-10458892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 50
               

               
Conread position:
               
242-464
               

               
Cow position:
               
chr17:12590988-12591213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
36, 103
               

               
Conread position:
               
244-464
               

               
Cow position:
               
chr17:20990367-20990148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
245-459
               

               
Cow position:
               
chr17:18419501-18419715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
33, 7
               

               
Conread position:
               
246-457
               

               
Cow position:
               
chr17:24821695-24821898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
32, 46
               

               
Conread position:
               
248-459
               

               
Cow position:
               
chr17:22032863-22032659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
30, 103
               

               
Conread position:
               
249-458
               

               
Cow position:
               
chr17:10491357-10491564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
29, 6
               

               
Conread position:
               
249-459
               

               
Cow position:
               
chr17:21918042-21917833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
29, 51
               

               
Conread position:
               
249-485
               

               
Cow position:
               
chr17:30359310-30359535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
103, 28
               

               
Conread position:
               
250-459
               

               
Cow position:
               
chr17:12306563-12306360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
28, 71
               

               
Conread position:
               
251-464
               

               
Cow position:
               
chr17:10510828-10510613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
28, 94
               

               
Conread position:
               
251-491
               

               
Cow position:
               
chr17:17683064-17682831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
27, 53
               

               
Conread position:
               
252-415
               

               
Cow position:
               
chr17:34650278-34650443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
26, 13
               

               
Conread position:
               
252-456
               

               
Cow position:
               
chr17:979318-979123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
26, 45
               

               
Conread position:
               
253-430
               

               
Cow position:
               
chr17:10037279-10037450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
171, 25
               

               
Conread position:
               
255-461
               

               
Cow position:
               
chr17:21298062-21298274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
23, 39
               

               
Conread position:
               
255-491
               

               
Cow position:
               
chr17:7142702-7142934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
255-491
               

               
Cow position:
               
chr17:27058715-27058484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
23, 55
               

               
Conread position:
               
256-433
               

               
Cow position:
               
chr17:20270780-20270603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 73
               

               
Conread position:
               
256-441
               

               
Cow position:
               
chr17:33039255-33039067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
256-446
               

               
Cow position:
               
chr17:26082911-26082720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 160
               

               
Conread position:
               
256-491
               

               
Cow position:
               
chr17:25916731-25916968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
22, 64
               

               
Conread position:
               
258-453
               

               
Cow position:
               
chr17:40792064-40792253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
20, 39
               

               
Conread position:
               
259-439
               

               
Cow position:
               
chr17:38613088-38613265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
19, 33
               

               
Conread position:
               
259-454
               

               
Cow position:
               
chr17:20928752-20928946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
19, 175
               

               
Conread position:
               
259-457
               

               
Cow position:
               
chr17:10020957-10020754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
259-459
               

               
Cow position:
               
chr17:27549986-27549788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
19, 42
               

               
Conread position:
               
259-464
               

               
Cow position:
               
chr17:28467978-28468172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
259-491
               

               
Cow position:
               
chr17:14762277-14762049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
260-456
               

               
Cow position:
               
chr17:18146025-18146221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
18, 57
               

               
Conread position:
               
262-464
               

               
Cow position:
               
chr17:1353241-1353441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
16, 58
               

               
Conread position:
               
262-491
               

               
Cow position:
               
chr17:9966188-9965954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
17, 176
               

               
Conread position:
               
263-499
               

               
Cow position:
               
chr17:267738-267501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
16, 29
               

               
Conread position:
               
264-458
               

               
Cow position:
               
chr17:484450-484636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
265-435
               

               
Cow position:
               
chr17:31701285-31701454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 53
               

               
Conread position:
               
265-458
               

               
Cow position:
               
chr17:21414991-21414798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
13, 159
               

               
Conread position:
               
265-458
               

               
Cow position:
               
chr17:21437474-21437281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
13, 169
               

               
Conread position:
               
265-464
               

               
Cow position:
               
chr17:4967958-4968156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
265-489
               

               
Cow position:
               
chr17:4786648-4786426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
266-459
               

               
Cow position:
               
chr17:5382137-5381955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
12, 26
               

               
Conread position:
               
269-464
               

               
Cow position:
               
chr17:14003669-14003867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
9, 49
               

               
Conread position:
               
270-459
               

               
Cow position:
               
chr17:6328961-6329154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
275-458
               

               
Cow position:
               
chr17:26233971-26233792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
73, 92
               

               
Conread position:
               
276-491
               

               
Cow position:
               
chr17:20335521-20335733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 23
               

               
Conread position:
               
277-445
               

               
Cow position:
               
chr17:11446046-11446214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
277-456
               

               
Cow position:
               
chr17:20846418-20846598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
277-459
               

               
Cow position:
               
chr17:34834359-34834175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
279-430
               

               
Cow position:
               
chr17:31581343-31581490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
16, 89
               

               
Conread position:
               
281-459
               

               
Cow position:
               
chr17:5144307-5144123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
281-491
               

               
Cow position:
               
chr17:29025925-29026144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 162
               

               
Conread position:
               
282-453
               

               
Cow position:
               
chr17:32280531-32280698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
282-491
               

               
Cow position:
               
chr17:25117754-25117957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 35
               

               
Conread position:
               
284-489
               

               
Cow position:
               
chr17:21911057-21910852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
13, 83
               

               
Conread position:
               
285-459
               

               
Cow position:
               
chr17:40673251-40673409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
58, 98
               

               
Conread position:
               
290-410
               

               
Cow position:
               
chr17:7136852-7136972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
291-491
               

               
Cow position:
               
chr17:7803300-7803102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
63, 26
               

               
Conread position:
               
294-430
               

               
Cow position:
               
chr17:43633986-43634116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
295-479
               

               
Cow position:
               
chr17:27647475-27647286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 116
               

               
Conread position:
               
296-457
               

               
Cow position:
               
chr17:27564998-27565158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 24
               

               
Conread position:
               
296-459
               

               
Cow position:
               
chr17:33411146-33410976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
296-464
               

               
Cow position:
               
chr17:1113761-1113932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 129
               

               
Conread position:
               
296-477
               

               
Cow position:
               
chr17:27833485-27833304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
56, 125
               

               
Conread position:
               
298-414
               

               
Cow position:
               
chr17:11962671-11962556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
52, 94
               

               
Conread position:
               
298-428
               

               
Cow position:
               
chr17:14060898-14060767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
298-451
               

               
Cow position:
               
chr17:10222505-10222353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
298-464
               

               
Cow position:
               
chr17:5830256-5830102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
298-464
               

               
Cow position:
               
chr17:11921404-11921230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
298-464
               

               
Cow position:
               
chr17:27184062-27183897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
128, 16
               

               
Conread position:
               
298-491
               

               
Cow position:
               
chr17:20884401-20884596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
140, 52
               

               
Conread position:
               
298-496
               

               
Cow position:
               
chr17:32348952-32349149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
142, 53
               

               
Conread position:
               
299-464
               

               
Cow position:
               
chr17:30734413-30734250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
301-458
               

               
Cow position:
               
chr17:24946980-24947137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
123, 135
               

               
Conread position:
               
301-458
               

               
Cow position:
               
chr17:25594822-25594653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
50, 27
               

               
Conread position:
               
302-459
               

               
Cow position:
               
chr17:31856545-31856712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
303-459
               

               
Cow position:
               
chr17:20874273-20874435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
43, 153
               

               
Conread position:
               
303-459
               

               
Cow position:
               
chr17:39857276-39857429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
126, 102
               

               
Conread position:
               
304-454
               

               
Cow position:
               
chr17:37699472-37699316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
304-459
               

               
Cow position:
               
chr17:7654568-7654413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
123, 13
               

               
Conread position:
               
304-506
               

               
Cow position:
               
chr17:24752429-24752231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
169, 57
               

               
Conread position:
               
305-457
               

               
Cow position:
               
chr17:24559178-24559327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
305-464
               

               
Cow position:
               
chr17:25122523-25122364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
68, 105
               

               
Conread position:
               
305-464
               

               
Cow position:
               
chr17:25501995-25502157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
119, 45
               

               
Conread position:
               
306-464
               

               
Cow position:
               
chr17:23798168-23798325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
121, 13
               

               
Conread position:
               
307-454
               

               
Cow position:
               
chr17:14883197-14883048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
307-464
               

               
Cow position:
               
chr17:10561517-10561677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
82, 46
               

               
Conread position:
               
307-464
               

               
Cow position:
               
chr17:11215342-11215186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
42, 62
               

               
Conread position:
               
311-491
               

               
Cow position:
               
chr17:21489732-21489552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
109, 17
               

               
Conread position:
               
316-438
               

               
Cow position:
               
chr17:9936141-9936021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
110, 44
               

               
Conread position:
               
317-464
               

               
Cow position:
               
chr17:34751508-34751361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
69, 33
               

               
Conread position:
               
319-457
               

               
Cow position:
               
chr17:14652881-14652743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
111, 31
               

               
Conread position:
               
319-457
               

               
Cow position:
               
chr17:38990002-38990135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
319-464
               

               
Cow position:
               
chr17:20305947-20306094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
322-426
               

               
Cow position:
               
chr17:3353783-3353887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
105
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
322-459
               

               
Cow position:
               
chr17:17266992-17266852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
322-464
               

               
Cow position:
               
chr17:1505213-1505357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 62
               

               
Conread position:
               
325-464
               

               
Cow position:
               
chr17:23517037-23516898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
97, 27
               

               
Conread position:
               
325-491
               

               
Cow position:
               
chr17:27203139-27202973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 111
               

               
Conread position:
               
328-452
               

               
Cow position:
               
chr17:18920442-18920323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
331-457
               

               
Cow position:
               
chr17:10432065-10431941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
332-459
               

               
Cow position:
               
chr17:25342828-25342702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
332-496
               

               
Cow position:
               
chr17:2275386-2275548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
73, 92
               

               
Conread position:
               
334-459
               

               
Cow position:
               
chr17:20857933-20857805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
100, 16
               

               
Conread position:
               
341-464
               

               
Cow position:
               
chr17:1469297-1469423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
85, 30
               

               
Conread position:
               
341-507
               

               
Cow position:
               
chr17:1466509-1466340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
88, 158
               

               
Conread position:
               
344-459
               

               
Cow position:
               
chr17:17193417-17193531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 36
               

               
Conread position:
               
344-491
               

               
Cow position:
               
chr17:21152280-21152429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
347-464
               

               
Cow position:
               
chr17:21806523-21806408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               
Show alignments to all cow chromosomes.