Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8060J09.5
        

               Conread position:
               33-464
               

               Cow position:
               chr3:64171992-64172419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               258
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               34, 189
               

               Conread position:
               122-362
               

               Cow position:
               chr3:40753802-40754031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               83, 21
               

               Conread position:
               138-493
               

               Cow position:
               chr3:14602055-14601701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 77
               

               Conread position:
               141-459
               

               Cow position:
               chr3:2015421-2015746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               35, 95
               

               Conread position:
               148-366
               

               Cow position:
               chr3:8901087-8901300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               62, 33
               

               Conread position:
               150-418
               

               Cow position:
               chr3:66885368-66885108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               67, 17
               

               Conread position:
               155-508
               

               Cow position:
               chr3:64281263-64280906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 63
               

               Conread position:
               157-425
               

               Cow position:
               chr3:11949678-11949416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               10, 19
               

               Conread position:
               166-410
               

               Cow position:
               chr3:51609497-51609746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               12, 8
               

               Conread position:
               166-461
               

               Cow position:
               chr3:38691722-38691432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 30
               

               Conread position:
               167-464
               

               Cow position:
               chr3:14633300-14633004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               214
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               111, 61
               

               Conread position:
               169-459
               

               Cow position:
               chr3:33327388-33327683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               7, 15
               

               Conread position:
               173-462
               

               Cow position:
               chr3:42480313-42480597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               5, 30
               

               Conread position:
               174-462
               

               Cow position:
               chr3:3738179-3738460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               37, 56
               

               Conread position:
               175-334
               

               Cow position:
               chr3:53508072-53508231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               59, 24
               

               Conread position:
               175-491
               

               Cow position:
               chr3:28908497-28908195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 26
               

               Conread position:
               177-352
               

               Cow position:
               chr3:202742-202562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               25, 66
               

               Conread position:
               177-378
               

               Cow position:
               chr3:12979217-12979420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               45, 33
               

               Conread position:
               177-382
               

               Cow position:
               chr3:14280534-14280744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               13, 116
               

               Conread position:
               178-440
               

               Cow position:
               chr3:5456554-5456283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               178-459
               

               Cow position:
               chr3:72675778-72676065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 181
               

               Conread position:
               179-449
               

               Cow position:
               chr3:26554015-26553747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               9, 56
               

               Conread position:
               180-467
               

               Cow position:
               chr3:65236721-65237006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               181-379
               

               Cow position:
               chr3:33693349-33693544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               36, 28
               

               Conread position:
               181-381
               

               Cow position:
               chr3:56523801-56523607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               181-438
               

               Cow position:
               chr3:15057900-15057655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               29, 21
               

               Conread position:
               181-444
               

               Cow position:
               chr3:48629890-48629631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               21, 140
               

               Conread position:
               183-491
               

               Cow position:
               chr3:79112676-79112374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               6, 27
               

               Conread position:
               187-411
               

               Cow position:
               chr3:53222936-53222715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               30, 22
               

               Conread position:
               187-464
               

               Cow position:
               chr3:58969192-58968924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               211
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               9, 102
               

               Conread position:
               188-440
               

               Cow position:
               chr3:81401596-81401351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               191
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               91, 22
               

               Conread position:
               189-462
               

               Cow position:
               chr3:66292471-66292199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               208
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               26, 41
               

               Conread position:
               198-410
               

               Cow position:
               chr3:31276387-31276173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               19, 12
               

               Conread position:
               199-440
               

               Cow position:
               chr3:74611281-74611518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               56, 15
               

               Conread position:
               201-380
               

               Cow position:
               chr3:22716562-22716385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               11, 96
               

               Conread position:
               201-435
               

               Cow position:
               chr3:55970945-55971178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 117
               

               Conread position:
               202-440
               

               Cow position:
               chr3:36174354-36174115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               15, 142
               

               Conread position:
               202-464
               

               Cow position:
               chr3:49140329-49140060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               81, 10
               

               Conread position:
               205-437
               

               Cow position:
               chr3:8923768-8923998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               12, 27
               

               Conread position:
               206-455
               

               Cow position:
               chr3:28939189-28938934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               23, 7
               

               Conread position:
               206-455
               

               Cow position:
               chr3:45523988-45524237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               11, 73
               

               Conread position:
               207-440
               

               Cow position:
               chr3:525079-525299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               10, 86
               

               Conread position:
               207-464
               

               Cow position:
               chr3:10347079-10347333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               10, 87
               

               Conread position:
               208-361
               

               Cow position:
               chr3:48900776-48900625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               9, 53
               

               Conread position:
               208-415
               

               Cow position:
               chr3:72776966-72777178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               9, 153
               

               Conread position:
               208-417
               

               Cow position:
               chr3:17284562-17284777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               208-418
               

               Cow position:
               chr3:23269830-23270031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               208-430
               

               Cow position:
               chr3:31419427-31419646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               9, 85
               

               Conread position:
               208-430
               

               Cow position:
               chr3:79902229-79902450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               9, 85
               

               Conread position:
               208-438
               

               Cow position:
               chr3:42461426-42461651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               9, 85
               

               Conread position:
               208-446
               

               Cow position:
               chr3:18198488-18198728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               208-450
               

               Cow position:
               chr3:65273673-65273431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 70
               

               Conread position:
               208-455
               

               Cow position:
               chr3:72141-72392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               9, 70
               

               Conread position:
               208-455
               

               Cow position:
               chr3:34525918-34525669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               9, 21
               

               Conread position:
               208-456
               

               Cow position:
               chr3:83474475-83474715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               9, 14
               

               Conread position:
               208-457
               

               Cow position:
               chr3:4457350-4457100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               192
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               9, 161
               

               Conread position:
               208-458
               

               Cow position:
               chr3:6873519-6873269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 71
               

               Conread position:
               208-464
               

               Cow position:
               chr3:53790818-53790557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               9, 141
               

               Conread position:
               208-464
               

               Cow position:
               chr3:59451321-59451573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               9, 26
               

               Conread position:
               208-464
               

               Cow position:
               chr3:78946113-78945852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 56
               

               Conread position:
               208-479
               

               Cow position:
               chr3:73467345-73467626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 61
               

               Conread position:
               208-480
               

               Cow position:
               chr3:18066860-18067137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 88
               

               Conread position:
               208-491
               

               Cow position:
               chr3:31309629-31309346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 85
               

               Conread position:
               208-491
               

               Cow position:
               chr3:75727863-75727576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               207
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               9, 83
               

               Conread position:
               209-346
               

               Cow position:
               chr3:37982393-37982259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 86
               

               Conread position:
               209-346
               

               Cow position:
               chr3:72018638-72018776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               8, 20
               

               Conread position:
               209-348
               

               Cow position:
               chr3:51491191-51491330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               8, 72
               

               Conread position:
               209-359
               

               Cow position:
               chr3:41947394-41947243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               209-361
               

               Cow position:
               chr3:40231656-40231811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               209-362
               

               Cow position:
               chr3:1498597-1498752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               209-363
               

               Cow position:
               chr3:3096620-3096470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               209-399
               

               Cow position:
               chr3:36657043-36656855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               8, 84
               

               Conread position:
               209-430
               

               Cow position:
               chr3:20155557-20155775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               6, 20
               

               Conread position:
               209-430
               

               Cow position:
               chr3:31298433-31298209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               175
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               8, 218
               

               Conread position:
               209-440
               

               Cow position:
               chr3:33124365-33124133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               209-444
               

               Cow position:
               chr3:4635066-4635302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               10, 143
               

               Conread position:
               209-445
               

               Cow position:
               chr3:11333591-11333354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               8, 161
               

               Conread position:
               209-447
               

               Cow position:
               chr3:48296438-48296674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               7, 23
               

               Conread position:
               209-458
               

               Cow position:
               chr3:3164769-3164522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               8, 84
               

               Conread position:
               209-458
               

               Cow position:
               chr3:9641291-9641540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               8, 82
               

               Conread position:
               209-458
               

               Cow position:
               chr3:59588246-59588487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               8, 86
               

               Conread position:
               209-459
               

               Cow position:
               chr3:2036025-2036273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               8, 86
               

               Conread position:
               209-459
               

               Cow position:
               chr3:27285952-27286204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 214
               

               Conread position:
               209-459
               

               Cow position:
               chr3:52017484-52017745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               20, 107
               

               Conread position:
               209-459
               

               Cow position:
               chr3:55445091-55445335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               24, 43
               

               Conread position:
               209-459
               

               Cow position:
               chr3:78200994-78201242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 137
               

               Conread position:
               209-464
               

               Cow position:
               chr3:43528510-43528257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 86
               

               Conread position:
               209-464
               

               Cow position:
               chr3:44623170-44622907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 20
               

               Conread position:
               209-464
               

               Cow position:
               chr3:57763950-57764201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 143
               

               Conread position:
               209-464
               

               Cow position:
               chr3:74499951-74500222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               209-465
               

               Cow position:
               chr3:19198408-19198658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               8, 84
               

               Conread position:
               209-468
               

               Cow position:
               chr3:53573023-53572769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               8, 84
               

               Conread position:
               209-476
               

               Cow position:
               chr3:59648987-59649249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               8, 20
               

               Conread position:
               209-491
               

               Cow position:
               chr3:18459793-18459520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               214
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               8, 84
               

               Conread position:
               209-491
               

               Cow position:
               chr3:29507323-29507590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               10, 80
               

               Conread position:
               209-491
               

               Cow position:
               chr3:53909841-53910116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               40, 20
               

               Conread position:
               209-491
               

               Cow position:
               chr3:82460910-82461187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 71
               

               Conread position:
               209-503
               

               Cow position:
               chr3:45647867-45648155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               69, 83
               

               Conread position:
               210-334
               

               Cow position:
               chr3:41053539-41053663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               68, 82
               

               Conread position:
               210-382
               

               Cow position:
               chr3:24639315-24639490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               210-382
               

               Cow position:
               chr3:79905187-79905021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               12, 42
               

               Conread position:
               210-384
               

               Cow position:
               chr3:59392382-59392205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               17, 161
               

               Conread position:
               210-403
               

               Cow position:
               chr3:61467334-61467525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               155
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               68, 135
               

               Conread position:
               210-406
               

               Cow position:
               chr3:18393655-18393467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               160
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               68, 82
               

               Conread position:
               210-407
               

               Cow position:
               chr3:52147951-52147748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               167
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               68, 112
               

               Conread position:
               210-413
               

               Cow position:
               chr3:7475701-7475493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               210-426
               

               Cow position:
               chr3:49337459-49337664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               61, 21
               

               Conread position:
               210-436
               

               Cow position:
               chr3:36204281-36204506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               211, 23
               

               Conread position:
               210-439
               

               Cow position:
               chr3:15655423-15655196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               68, 135
               

               Conread position:
               210-448
               

               Cow position:
               chr3:13577455-13577224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               185
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               66, 17
               

               Conread position:
               210-450
               

               Cow position:
               chr3:82359779-82360008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 18
               

               Conread position:
               210-456
               

               Cow position:
               chr3:4049938-4050167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               18, 61
               

               Conread position:
               210-456
               

               Cow position:
               chr3:65325651-65325399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               9, 19
               

               Conread position:
               210-456
               

               Cow position:
               chr3:75057389-75057159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               12, 28
               

               Conread position:
               210-457
               

               Cow position:
               chr3:83455423-83455177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               68, 76
               

               Conread position:
               210-458
               

               Cow position:
               chr3:72390810-72391055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 18
               

               Conread position:
               210-459
               

               Cow position:
               chr3:13118074-13118316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               195
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               68, 161
               

               Conread position:
               210-459
               

               Cow position:
               chr3:29360410-29360172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               12, 51
               

               Conread position:
               210-459
               

               Cow position:
               chr3:49230740-49230992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 18
               

               Conread position:
               210-459
               

               Cow position:
               chr3:49787135-49787388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 110
               

               Conread position:
               210-459
               

               Cow position:
               chr3:57577424-57577671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 18
               

               Conread position:
               210-459
               

               Cow position:
               chr3:57754755-57754502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 197
               

               Conread position:
               210-459
               

               Cow position:
               chr3:58540805-58540555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 229
               

               Conread position:
               210-459
               

               Cow position:
               chr3:73394845-73395091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 220
               

               Conread position:
               210-464
               

               Cow position:
               chr3:2007999-2008250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               218, 11
               

               Conread position:
               210-464
               

               Cow position:
               chr3:23408617-23408377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               13, 69
               

               Conread position:
               210-464
               

               Cow position:
               chr3:44535034-44534780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 17
               

               Conread position:
               210-464
               

               Cow position:
               chr3:54903298-54903552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               68, 19
               

               Conread position:
               210-464
               

               Cow position:
               chr3:60597277-60597523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 66
               

               Conread position:
               210-464
               

               Cow position:
               chr3:62999276-62999028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 175
               

               Conread position:
               210-464
               

               Cow position:
               chr3:70333748-70333502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               23, 83
               

               Conread position:
               210-465
               

               Cow position:
               chr3:72018848-72019099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 68
               

               Conread position:
               210-476
               

               Cow position:
               chr3:77188171-77188430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               191, 68
               

               Conread position:
               210-489
               

               Cow position:
               chr3:3032123-3032413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               215
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               16, 56
               

               Conread position:
               210-491
               

               Cow position:
               chr3:37041154-37041427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               13, 84
               

               Conread position:
               210-491
               

               Cow position:
               chr3:55970232-55970515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 109
               

               Conread position:
               210-491
               

               Cow position:
               chr3:73708779-73709055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 18
               

               Conread position:
               210-491
               

               Cow position:
               chr3:74409220-74409488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               68, 77
               

               Conread position:
               210-493
               

               Cow position:
               chr3:25690513-25690799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 206
               

               Conread position:
               210-494
               

               Cow position:
               chr3:8393664-8393950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               20, 86
               

               Conread position:
               210-498
               

               Cow position:
               chr3:65800320-65800604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 98
               

               Conread position:
               211-408
               

               Cow position:
               chr3:4329064-4329264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               67, 17
               

               Conread position:
               211-458
               

               Cow position:
               chr3:12323794-12324043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               6, 62
               

               Conread position:
               211-464
               

               Cow position:
               chr3:80740304-80740546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               67, 18
               

               Conread position:
               212-379
               

               Cow position:
               chr3:80818460-80818622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               66, 42
               

               Conread position:
               212-407
               

               Cow position:
               chr3:33253151-33252955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               162
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               17, 81
               

               Conread position:
               212-426
               

               Cow position:
               chr3:1299963-1300171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               5, 82
               

               Conread position:
               212-427
               

               Cow position:
               chr3:34096224-34096010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               5, 67
               

               Conread position:
               212-451
               

               Cow position:
               chr3:10124265-10124024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               212-459
               

               Cow position:
               chr3:57624193-57624438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 87
               

               Conread position:
               212-459
               

               Cow position:
               chr3:68627945-68627713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               5, 66
               

               Conread position:
               212-464
               

               Cow position:
               chr3:60892363-60892602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               192
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               66, 80
               

               Conread position:
               212-465
               

               Cow position:
               chr3:21341233-21340978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               66, 52
               

               Conread position:
               213-349
               

               Cow position:
               chr3:16886147-16886012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               65, 16
               

               Conread position:
               213-358
               

               Cow position:
               chr3:44254696-44254551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               65, 14
               

               Conread position:
               213-362
               

               Cow position:
               chr3:19711583-19711435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               65, 48
               

               Conread position:
               213-412
               

               Cow position:
               chr3:59701745-59701936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               65, 81
               

               Conread position:
               213-429
               

               Cow position:
               chr3:69750969-69750757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               16, 65
               

               Conread position:
               213-436
               

               Cow position:
               chr3:42594924-42594707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               39, 15
               

               Conread position:
               213-459
               

               Cow position:
               chr3:66901010-66900759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               198
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               65, 79
               

               Conread position:
               213-464
               

               Cow position:
               chr3:77271536-77271298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               16, 101
               

               Conread position:
               213-476
               

               Cow position:
               chr3:67544142-67543877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               65, 257
               

               Conread position:
               214-348
               

               Cow position:
               chr3:42914186-42914320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               57, 45
               

               Conread position:
               214-358
               

               Cow position:
               chr3:56125480-56125625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               214-375
               

               Cow position:
               chr3:12670960-12670806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               10, 81
               

               Conread position:
               214-382
               

               Cow position:
               chr3:83988214-83988384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               64, 75
               

               Conread position:
               214-402
               

               Cow position:
               chr3:18887312-18887507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               34, 178
               

               Conread position:
               214-403
               

               Cow position:
               chr3:44861575-44861385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               64, 131
               

               Conread position:
               214-408
               

               Cow position:
               chr3:53903919-53904102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               214-410
               

               Cow position:
               chr3:48852233-48852036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               158
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               64, 24
               

               Conread position:
               214-415
               

               Cow position:
               chr3:55117239-55117035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               162
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               214-424
               

               Cow position:
               chr3:48433678-48433889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               62, 141
               

               Conread position:
               214-425
               

               Cow position:
               chr3:16810058-16809845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               214-427
               

               Cow position:
               chr3:2483186-2483388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               132, 64
               

               Conread position:
               214-430
               

               Cow position:
               chr3:14465971-14465768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               64, 42
               

               Conread position:
               214-430
               

               Cow position:
               chr3:78443830-78443617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               64, 175
               

               Conread position:
               214-431
               

               Cow position:
               chr3:61678424-61678640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               172
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               64, 91
               

               Conread position:
               214-432
               

               Cow position:
               chr3:69779171-69778955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               64, 202
               

               Conread position:
               214-433
               

               Cow position:
               chr3:69945206-69944989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               64, 202
               

               Conread position:
               214-437
               

               Cow position:
               chr3:55460768-55460547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               64, 132
               

               Conread position:
               214-439
               

               Cow position:
               chr3:11385406-11385630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               64, 202
               

               Conread position:
               214-439
               

               Cow position:
               chr3:23203771-23203550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               64, 26
               

               Conread position:
               214-443
               

               Cow position:
               chr3:22954117-22953901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               172, 26
               

               Conread position:
               214-446
               

               Cow position:
               chr3:14864772-14865002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               65, 102
               

               Conread position:
               214-446
               

               Cow position:
               chr3:20137120-20136885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               64, 210
               

               Conread position:
               214-450
               

               Cow position:
               chr3:70450080-70450317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               214-451
               

               Cow position:
               chr3:50259135-50258894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               64, 14
               

               Conread position:
               214-452
               

               Cow position:
               chr3:54770737-54770980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               62, 78
               

               Conread position:
               214-456
               

               Cow position:
               chr3:35283364-35283118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 14
               

               Conread position:
               214-458
               

               Cow position:
               chr3:67704273-67704519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 101
               

               Conread position:
               214-459
               

               Cow position:
               chr3:11026659-11026893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               64, 68
               

               Conread position:
               214-459
               

               Cow position:
               chr3:24852854-24852611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               64, 148
               

               Conread position:
               214-459
               

               Cow position:
               chr3:49650113-49650362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 14
               

               Conread position:
               214-459
               

               Cow position:
               chr3:62883935-62884182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               21, 139
               

               Conread position:
               214-459
               

               Cow position:
               chr3:67161665-67161918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 14
               

               Conread position:
               214-462
               

               Cow position:
               chr3:50768412-50768656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 14
               

               Conread position:
               214-464
               

               Cow position:
               chr3:2393233-2392983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 104
               

               Conread position:
               214-464
               

               Cow position:
               chr3:5096936-5097186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 79
               

               Conread position:
               214-464
               

               Cow position:
               chr3:12712190-12711936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               214-464
               

               Cow position:
               chr3:21081652-21081397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               64, 30
               

               Conread position:
               214-464
               

               Cow position:
               chr3:55085451-55085192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 78
               

               Conread position:
               214-464
               

               Cow position:
               chr3:59001012-59000773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 14
               

               Conread position:
               214-464
               

               Cow position:
               chr3:61840022-61840258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               175, 64
               

               Conread position:
               214-464
               

               Cow position:
               chr3:75479745-75479982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               64, 76
               

               Conread position:
               214-465
               

               Cow position:
               chr3:68708268-68708028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               64, 16
               

               Conread position:
               214-484
               

               Cow position:
               chr3:17952389-17952657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 106
               

               Conread position:
               214-490
               

               Cow position:
               chr3:59514844-59515111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               212
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               64, 78
               

               Conread position:
               214-491
               

               Cow position:
               chr3:8147930-8147659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               64, 18
               

               Conread position:
               214-491
               

               Cow position:
               chr3:8393079-8393358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 192
               

               Conread position:
               214-491
               

               Cow position:
               chr3:71231139-71231404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 77
               

               Conread position:
               214-491
               

               Cow position:
               chr3:73764460-73764187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 23
               

               Conread position:
               214-491
               

               Cow position:
               chr3:75158098-75158369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 64
               

               Conread position:
               214-493
               

               Cow position:
               chr3:17935190-17934928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               215, 64
               

               Conread position:
               214-495
               

               Cow position:
               chr3:59473845-59474134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 142
               

               Conread position:
               214-502
               

               Cow position:
               chr3:56704121-56703832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               64, 90
               

               Conread position:
               214-503
               

               Cow position:
               chr3:51146933-51146645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               66, 131
               

               Conread position:
               214-508
               

               Cow position:
               chr3:70899633-70899915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               64, 78
               

               Conread position:
               214-523
               

               Cow position:
               chr3:56637399-56637712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               64, 129
               

               Conread position:
               215-418
               

               Cow position:
               chr3:20471625-20471433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               129, 13
               

               Conread position:
               215-426
               

               Cow position:
               chr3:53509952-53509744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               63, 126
               

               Conread position:
               215-434
               

               Cow position:
               chr3:59208548-59208763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               63, 77
               

               Conread position:
               215-459
               

               Cow position:
               chr3:2903556-2903319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               195
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               61, 77
               

               Conread position:
               216-340
               

               Cow position:
               chr3:42671056-42671178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-342
               

               Cow position:
               chr3:57022310-57022428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-344
               

               Cow position:
               chr3:59179141-59179269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-347
               

               Cow position:
               chr3:470691-470559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               216-349
               

               Cow position:
               chr3:76092021-76092153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               60, 12
               

               Conread position:
               216-350
               

               Cow position:
               chr3:39873926-39873798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               61, 13
               

               Conread position:
               216-353
               

               Cow position:
               chr3:6403032-6403167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-354
               

               Cow position:
               chr3:50329340-50329205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-359
               

               Cow position:
               chr3:51033080-51033221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-363
               

               Cow position:
               chr3:48811250-48811102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               62, 31
               

               Conread position:
               216-364
               

               Cow position:
               chr3:68262515-68262667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               56, 89
               

               Conread position:
               216-364
               

               Cow position:
               chr3:75164175-75164033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               216-372
               

               Cow position:
               chr3:28357864-28357707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-372
               

               Cow position:
               chr3:68514814-68514672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               216-375
               

               Cow position:
               chr3:22908099-22907941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               62, 102
               

               Conread position:
               216-379
               

               Cow position:
               chr3:61262538-61262698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-380
               

               Cow position:
               chr3:18607103-18607267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               13, 130
               

               Conread position:
               216-381
               

               Cow position:
               chr3:37486048-37485882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               62, 44
               

               Conread position:
               216-382
               

               Cow position:
               chr3:83369057-83369214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               62, 81
               

               Conread position:
               216-385
               

               Cow position:
               chr3:70468068-70467906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-385
               

               Cow position:
               chr3:73961944-73961779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               128, 62
               

               Conread position:
               216-395
               

               Cow position:
               chr3:51012798-51012622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               64, 76
               

               Conread position:
               216-397
               

               Cow position:
               chr3:65020069-65020248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               62, 102
               

               Conread position:
               216-398
               

               Cow position:
               chr3:77276669-77276494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               60, 12
               

               Conread position:
               216-401
               

               Cow position:
               chr3:34392361-34392181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-404
               

               Cow position:
               chr3:26493489-26493302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-405
               

               Cow position:
               chr3:54340681-54340492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               17, 131
               

               Conread position:
               216-409
               

               Cow position:
               chr3:16004251-16004066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-409
               

               Cow position:
               chr3:79148541-79148345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               62, 170
               

               Conread position:
               216-413
               

               Cow position:
               chr3:18854828-18855023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               161
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               62, 71
               

               Conread position:
               216-415
               

               Cow position:
               chr3:70130077-70129881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               52, 47
               

               Conread position:
               216-418
               

               Cow position:
               chr3:8457391-8457587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               62, 27
               

               Conread position:
               216-419
               

               Cow position:
               chr3:22170924-22171121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               25, 77
               

               Conread position:
               216-419
               

               Cow position:
               chr3:35299409-35299600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               216-426
               

               Cow position:
               chr3:15158776-15158983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               61, 76
               

               Conread position:
               216-426
               

               Cow position:
               chr3:23277810-23277602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               17, 100
               

               Conread position:
               216-426
               

               Cow position:
               chr3:32399520-32399314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               13, 77
               

               Conread position:
               216-426
               

               Cow position:
               chr3:36100563-36100776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-427
               

               Cow position:
               chr3:6265242-6265454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               63, 196
               

               Conread position:
               216-427
               

               Cow position:
               chr3:56704802-56704602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               169
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-427
               

               Cow position:
               chr3:83920933-83921139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 166
               

               Conread position:
               216-428
               

               Cow position:
               chr3:13899718-13899503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 166
               

               Conread position:
               216-428
               

               Cow position:
               chr3:66978578-66978778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-429
               

               Cow position:
               chr3:58383703-58383910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               171
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-429
               

               Cow position:
               chr3:79592154-79591938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               216-430
               

               Cow position:
               chr3:6853765-6853560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-430
               

               Cow position:
               chr3:12675304-12675089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               14, 83
               

               Conread position:
               216-430
               

               Cow position:
               chr3:16547411-16547620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               62, 83
               

               Conread position:
               216-430
               

               Cow position:
               chr3:20129676-20129889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               7, 79
               

               Conread position:
               216-430
               

               Cow position:
               chr3:42603565-42603775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               56, 71
               

               Conread position:
               216-430
               

               Cow position:
               chr3:66116377-66116165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-431
               

               Cow position:
               chr3:2518802-2518586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-431
               

               Cow position:
               chr3:33633152-33632946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               60, 67
               

               Conread position:
               216-431
               

               Cow position:
               chr3:38863848-38864060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               26, 80
               

               Conread position:
               216-431
               

               Cow position:
               chr3:42367754-42367556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               62, 33
               

               Conread position:
               216-433
               

               Cow position:
               chr3:6863891-6863675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               62, 203
               

               Conread position:
               216-433
               

               Cow position:
               chr3:40345135-40345353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               25, 62
               

               Conread position:
               216-433
               

               Cow position:
               chr3:50762860-50763071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               67, 17
               

               Conread position:
               216-433
               

               Cow position:
               chr3:53588655-53588437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               60, 68
               

               Conread position:
               216-434
               

               Cow position:
               chr3:13274643-13274422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-434
               

               Cow position:
               chr3:73777013-73777234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               62, 35
               

               Conread position:
               216-435
               

               Cow position:
               chr3:66738508-66738722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-436
               

               Cow position:
               chr3:23944832-23945050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               55, 78
               

               Conread position:
               216-436
               

               Cow position:
               chr3:31903373-31903162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               211, 11
               

               Conread position:
               216-436
               

               Cow position:
               chr3:48370866-48371089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               62, 129
               

               Conread position:
               216-437
               

               Cow position:
               chr3:27532927-27532704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               63, 129
               

               Conread position:
               216-437
               

               Cow position:
               chr3:34079774-34079997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               216-437
               

               Cow position:
               chr3:54653256-54653034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-437
               

               Cow position:
               chr3:54862689-54862462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               10, 77
               

               Conread position:
               216-437
               

               Cow position:
               chr3:62292381-62292171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               62, 32
               

               Conread position:
               216-438
               

               Cow position:
               chr3:31907414-31907189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               25, 133
               

               Conread position:
               216-438
               

               Cow position:
               chr3:35884218-35884003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               99, 61
               

               Conread position:
               216-438
               

               Cow position:
               chr3:42452245-42452464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               14, 102
               

               Conread position:
               216-439
               

               Cow position:
               chr3:10017849-10018071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               62, 200
               

               Conread position:
               216-439
               

               Cow position:
               chr3:22021238-22021022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               60, 99
               

               Conread position:
               216-439
               

               Cow position:
               chr3:24442203-24441983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               218, 61
               

               Conread position:
               216-439
               

               Cow position:
               chr3:30568018-30568240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               62, 200
               

               Conread position:
               216-439
               

               Cow position:
               chr3:40827589-40827811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               62, 200
               

               Conread position:
               216-439
               

               Cow position:
               chr3:60092848-60092625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               62, 201
               

               Conread position:
               216-439
               

               Cow position:
               chr3:64011082-64010869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               62, 58
               

               Conread position:
               216-439
               

               Cow position:
               chr3:73211719-73211941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               62, 200
               

               Conread position:
               216-439
               

               Cow position:
               chr3:74699660-74699441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               62, 44
               

               Conread position:
               216-439
               

               Cow position:
               chr3:77365559-77365344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 62
               

               Conread position:
               216-440
               

               Cow position:
               chr3:54945860-54946082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 21
               

               Conread position:
               216-440
               

               Cow position:
               chr3:58174646-58174860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               153, 43
               

               Conread position:
               216-440
               

               Cow position:
               chr3:58283275-58283055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               62, 157
               

               Conread position:
               216-440
               

               Cow position:
               chr3:68342519-68342300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               49, 74
               

               Conread position:
               216-440
               

               Cow position:
               chr3:78530271-78530488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               21, 77
               

               Conread position:
               216-440
               

               Cow position:
               chr3:80082082-80081865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               62, 25
               

               Conread position:
               216-441
               

               Cow position:
               chr3:39857877-39858104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               62, 158
               

               Conread position:
               216-441
               

               Cow position:
               chr3:56059542-56059763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               170, 62
               

               Conread position:
               216-442
               

               Cow position:
               chr3:58286163-58285943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-443
               

               Cow position:
               chr3:23477970-23478184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               25, 80
               

               Conread position:
               216-445
               

               Cow position:
               chr3:4223050-4223271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               20, 61
               

               Conread position:
               216-445
               

               Cow position:
               chr3:74600852-74601070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               62, 69
               

               Conread position:
               216-446
               

               Cow position:
               chr3:17710072-17710297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-446
               

               Cow position:
               chr3:51014101-51013874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               63, 27
               

               Conread position:
               216-446
               

               Cow position:
               chr3:53674506-53674277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               62, 169
               

               Conread position:
               216-448
               

               Cow position:
               chr3:82657350-82657121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               63, 78
               

               Conread position:
               216-450
               

               Cow position:
               chr3:5950695-5950461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               62, 200
               

               Conread position:
               216-450
               

               Cow position:
               chr3:19752157-19751925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               62, 106
               

               Conread position:
               216-451
               

               Cow position:
               chr3:5495761-5495529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               57, 76
               

               Conread position:
               216-451
               

               Cow position:
               chr3:6442970-6443203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               60, 214
               

               Conread position:
               216-451
               

               Cow position:
               chr3:11728347-11728111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-451
               

               Cow position:
               chr3:21100703-21100939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               62, 200
               

               Conread position:
               216-451
               

               Cow position:
               chr3:24939490-24939259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-451
               

               Cow position:
               chr3:67744893-67744665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 130
               

               Conread position:
               216-451
               

               Cow position:
               chr3:76138224-76138445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-453
               

               Cow position:
               chr3:75046135-75045904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               212, 17
               

               Conread position:
               216-454
               

               Cow position:
               chr3:42588084-42588329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 99
               

               Conread position:
               216-455
               

               Cow position:
               chr3:4461754-4461520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-455
               

               Cow position:
               chr3:78894579-78894355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               62, 71
               

               Conread position:
               216-456
               

               Cow position:
               chr3:26682058-26681830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-456
               

               Cow position:
               chr3:46341196-46341435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               206, 137
               

               Conread position:
               216-456
               

               Cow position:
               chr3:49382687-49382920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               62, 100
               

               Conread position:
               216-456
               

               Cow position:
               chr3:53112903-53113146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 136
               

               Conread position:
               216-456
               

               Cow position:
               chr3:63861166-63860918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 185
               

               Conread position:
               216-457
               

               Cow position:
               chr3:29807197-29807438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 101
               

               Conread position:
               216-457
               

               Cow position:
               chr3:45312789-45313023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               63, 12
               

               Conread position:
               216-457
               

               Cow position:
               chr3:58951356-58951587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-457
               

               Cow position:
               chr3:60933150-60933389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               191
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               57, 89
               

               Conread position:
               216-457
               

               Cow position:
               chr3:61191182-61190952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               215, 60
               

               Conread position:
               216-457
               

               Cow position:
               chr3:62321400-62321160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               62, 16
               

               Conread position:
               216-457
               

               Cow position:
               chr3:78076924-78077157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               62, 127
               

               Conread position:
               216-458
               

               Cow position:
               chr3:210057-210292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 77
               

               Conread position:
               216-458
               

               Cow position:
               chr3:1830828-1830600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               211, 47
               

               Conread position:
               216-458
               

               Cow position:
               chr3:5899561-5899798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               191
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               62, 17
               

               Conread position:
               216-458
               

               Cow position:
               chr3:7858087-7858344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               196
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-458
               

               Cow position:
               chr3:15661966-15661728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 77
               

               Conread position:
               216-458
               

               Cow position:
               chr3:20663803-20663560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               62, 215
               

               Conread position:
               216-458
               

               Cow position:
               chr3:26903850-26904083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-458
               

               Cow position:
               chr3:29596128-29596363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               8, 79
               

               Conread position:
               216-458
               

               Cow position:
               chr3:29891682-29891436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               62, 49
               

               Conread position:
               216-458
               

               Cow position:
               chr3:30358899-30358660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               67, 76
               

               Conread position:
               216-458
               

               Cow position:
               chr3:35975370-35975135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               62, 101
               

               Conread position:
               216-458
               

               Cow position:
               chr3:59101570-59101804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               20, 13
               

               Conread position:
               216-458
               

               Cow position:
               chr3:59205976-59206216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-458
               

               Cow position:
               chr3:59267819-59268062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               67, 168
               

               Conread position:
               216-458
               

               Cow position:
               chr3:70895781-70896017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               62, 129
               

               Conread position:
               216-458
               

               Cow position:
               chr3:80202342-80202578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               162
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               62, 92
               

               Conread position:
               216-458
               

               Cow position:
               chr3:81939986-81940231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-459
               

               Cow position:
               chr3:364484-364238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               62, 228
               

               Conread position:
               216-459
               

               Cow position:
               chr3:2024919-2025170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               199
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               62, 101
               

               Conread position:
               216-459
               

               Cow position:
               chr3:2216095-2216342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-459
               

               Cow position:
               chr3:2674764-2675003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-459
               

               Cow position:
               chr3:4332098-4332339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 194
               

               Conread position:
               216-459
               

               Cow position:
               chr3:5420131-5419885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               60, 155
               

               Conread position:
               216-459
               

               Cow position:
               chr3:7408218-7408462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               67, 219
               

               Conread position:
               216-459
               

               Cow position:
               chr3:13302121-13301876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 98
               

               Conread position:
               216-459
               

               Cow position:
               chr3:14626415-14626182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               99, 13
               

               Conread position:
               216-459
               

               Cow position:
               chr3:14801486-14801718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               132, 62
               

               Conread position:
               216-459
               

               Cow position:
               chr3:15387946-15388187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               181
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               62, 169
               

               Conread position:
               216-459
               

               Cow position:
               chr3:15954342-15954111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               63, 100
               

               Conread position:
               216-459
               

               Cow position:
               chr3:16157416-16157650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               81, 12
               

               Conread position:
               216-459
               

               Cow position:
               chr3:17456534-17456294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               62, 166
               

               Conread position:
               216-459
               

               Cow position:
               chr3:22089547-22089303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               216-459
               

               Cow position:
               chr3:23876733-23876971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-459
               

               Cow position:
               chr3:24305170-24304941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               128, 37
               

               Conread position:
               216-459
               

               Cow position:
               chr3:27289672-27289913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               62, 89
               

               Conread position:
               216-459
               

               Cow position:
               chr3:30417864-30418110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               62, 105
               

               Conread position:
               216-459
               

               Cow position:
               chr3:30463431-30463197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-459
               

               Cow position:
               chr3:34316229-34315980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               64, 129
               

               Conread position:
               216-459
               

               Cow position:
               chr3:35915439-35915679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               203, 12
               

               Conread position:
               216-459
               

               Cow position:
               chr3:36417643-36417887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               62, 200
               

               Conread position:
               216-459
               

               Cow position:
               chr3:37599681-37599454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-459
               

               Cow position:
               chr3:39921045-39920801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-459
               

               Cow position:
               chr3:42483635-42483882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 80
               

               Conread position:
               216-459
               

               Cow position:
               chr3:46161110-46160869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               189
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               61, 76
               

               Conread position:
               216-459
               

               Cow position:
               chr3:48530372-48530610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-459
               

               Cow position:
               chr3:49454970-49455212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               62, 92
               

               Conread position:
               216-459
               

               Cow position:
               chr3:49461202-49460952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               188
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-459
               

               Cow position:
               chr3:51542820-51543062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               216-459
               

               Cow position:
               chr3:54050284-54050051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               132, 88
               

               Conread position:
               216-459
               

               Cow position:
               chr3:54959926-54960164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-459
               

               Cow position:
               chr3:55039687-55039445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               65, 61
               

               Conread position:
               216-459
               

               Cow position:
               chr3:59366282-59366529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-459
               

               Cow position:
               chr3:61539531-61539780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-459
               

               Cow position:
               chr3:66708337-66708092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               69, 56
               

               Conread position:
               216-459
               

               Cow position:
               chr3:69961976-69961742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-459
               

               Cow position:
               chr3:71161529-71161774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               62, 75
               

               Conread position:
               216-459
               

               Cow position:
               chr3:72131563-72131321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               13, 62
               

               Conread position:
               216-459
               

               Cow position:
               chr3:72473642-72473889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-459
               

               Cow position:
               chr3:76172927-76172694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 41
               

               Conread position:
               216-459
               

               Cow position:
               chr3:77753830-77754070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               62, 141
               

               Conread position:
               216-459
               

               Cow position:
               chr3:79884751-79884508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               62, 13
               

               Conread position:
               216-459
               

               Cow position:
               chr3:80973088-80973325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               62, 153
               

               Conread position:
               216-460
               

               Cow position:
               chr3:17695271-17695027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               7, 101
               

               Conread position:
               216-460
               

               Cow position:
               chr3:19006402-19006633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               190
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-460
               

               Cow position:
               chr3:53592965-53592714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 21
               

               Conread position:
               216-461
               

               Cow position:
               chr3:29812979-29813222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-462
               

               Cow position:
               chr3:19789384-19789137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               197
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               60, 115
               

               Conread position:
               216-462
               

               Cow position:
               chr3:32869884-32870126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               55, 76
               

               Conread position:
               216-464
               

               Cow position:
               chr3:56634-56398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               62, 15
               

               Conread position:
               216-464
               

               Cow position:
               chr3:1133360-1133098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               66, 75
               

               Conread position:
               216-464
               

               Cow position:
               chr3:4031703-4031953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 78
               

               Conread position:
               216-464
               

               Cow position:
               chr3:11019853-11020097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               216-464
               

               Cow position:
               chr3:13330037-13329794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               62, 13
               

               Conread position:
               216-464
               

               Cow position:
               chr3:17451199-17450960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               195
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               62, 104
               

               Conread position:
               216-464
               

               Cow position:
               chr3:19708364-19708125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               216-464
               

               Cow position:
               chr3:20802894-20802641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               198
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-464
               

               Cow position:
               chr3:22676347-22676116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               62, 37
               

               Conread position:
               216-464
               

               Cow position:
               chr3:23169335-23169084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 129
               

               Conread position:
               216-464
               

               Cow position:
               chr3:26920632-26920888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               216-464
               

               Cow position:
               chr3:29887689-29887442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 67
               

               Conread position:
               216-464
               

               Cow position:
               chr3:30701057-30701289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               191
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               212, 68
               

               Conread position:
               216-464
               

               Cow position:
               chr3:32584893-32585129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               60, 72
               

               Conread position:
               216-464
               

               Cow position:
               chr3:38346936-38347172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               196
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               62, 102
               

               Conread position:
               216-464
               

               Cow position:
               chr3:45534564-45534314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               62, 13
               

               Conread position:
               216-464
               

               Cow position:
               chr3:45647410-45647659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               7, 130
               

               Conread position:
               216-464
               

               Cow position:
               chr3:51578586-51578344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-464
               

               Cow position:
               chr3:53384548-53384301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 61
               

               Conread position:
               216-464
               

               Cow position:
               chr3:54434709-54434956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 12
               

               Conread position:
               216-464
               

               Cow position:
               chr3:54782277-54782030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               11, 34
               

               Conread position:
               216-464
               

               Cow position:
               chr3:55010420-55010182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               128, 44
               

               Conread position:
               216-464
               

               Cow position:
               chr3:55190015-55189775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               215, 6
               

               Conread position:
               216-464
               

               Cow position:
               chr3:57554112-57553869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 62
               

               Conread position:
               216-464
               

               Cow position:
               chr3:59691639-59691870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               59, 76
               

               Conread position:
               216-464
               

               Cow position:
               chr3:61278641-61278890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 94
               

               Conread position:
               216-464
               

               Cow position:
               chr3:65058437-65058679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-464
               

               Cow position:
               chr3:67929531-67929281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 37
               

               Conread position:
               216-464
               

               Cow position:
               chr3:70401638-70401876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-464
               

               Cow position:
               chr3:70566003-70565759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               62, 78
               

               Conread position:
               216-464
               

               Cow position:
               chr3:71430477-71430225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-464
               

               Cow position:
               chr3:73443352-73443110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               189
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-464
               

               Cow position:
               chr3:74533083-74533328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 129
               

               Conread position:
               216-464
               

               Cow position:
               chr3:75711054-75711285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               216-464
               

               Cow position:
               chr3:76387877-76387621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               58, 17
               

               Conread position:
               216-464
               

               Cow position:
               chr3:77496552-77496808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 127
               

               Conread position:
               216-464
               

               Cow position:
               chr3:80071852-80072108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               195
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-464
               

               Cow position:
               chr3:80581406-80581641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 84
               

               Conread position:
               216-464
               

               Cow position:
               chr3:81277969-81277719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               7, 130
               

               Conread position:
               216-464
               

               Cow position:
               chr3:82056382-82056133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               64, 12
               

               Conread position:
               216-464
               

               Cow position:
               chr3:83816058-83815808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               188
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               62, 123
               

               Conread position:
               216-465
               

               Cow position:
               chr3:17957202-17957447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               194
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               133, 31
               

               Conread position:
               216-465
               

               Cow position:
               chr3:49731902-49731659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-465
               

               Cow position:
               chr3:69417053-69416801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               216-468
               

               Cow position:
               chr3:46900930-46901177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-472
               

               Cow position:
               chr3:522460-522687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               216-474
               

               Cow position:
               chr3:14263127-14263386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               57, 93
               

               Conread position:
               216-476
               

               Cow position:
               chr3:39066068-39066324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               61, 92
               

               Conread position:
               216-476
               

               Cow position:
               chr3:53270561-53270822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 86
               

               Conread position:
               216-476
               

               Cow position:
               chr3:62826888-62826631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 135
               

               Conread position:
               216-477
               

               Cow position:
               chr3:3985065-3985320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-477
               

               Cow position:
               chr3:73956761-73957015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               60, 76
               

               Conread position:
               216-478
               

               Cow position:
               chr3:36570315-36570051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               67, 93
               

               Conread position:
               216-479
               

               Cow position:
               chr3:34270666-34270912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               99, 12
               

               Conread position:
               216-479
               

               Cow position:
               chr3:42423596-42423331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-479
               

               Cow position:
               chr3:75570706-75570457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               62, 17
               

               Conread position:
               216-483
               

               Cow position:
               chr3:49119297-49119026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               24, 215
               

               Conread position:
               216-491
               

               Cow position:
               chr3:5851192-5850921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-491
               

               Cow position:
               chr3:6078600-6078322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               62, 222
               

               Conread position:
               216-491
               

               Cow position:
               chr3:7763398-7763664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               13, 95
               

               Conread position:
               216-491
               

               Cow position:
               chr3:9663452-9663164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-491
               

               Cow position:
               chr3:15229084-15228815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-491
               

               Cow position:
               chr3:19824525-19824248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               62, 193
               

               Conread position:
               216-491
               

               Cow position:
               chr3:23471733-23471451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 165
               

               Conread position:
               216-491
               

               Cow position:
               chr3:27546098-27545811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               62, 13
               

               Conread position:
               216-491
               

               Cow position:
               chr3:35852732-35852463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               63, 12
               

               Conread position:
               216-491
               

               Cow position:
               chr3:44101716-44101976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               13, 58
               

               Conread position:
               216-491
               

               Cow position:
               chr3:48252632-48252893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               62, 21
               

               Conread position:
               216-491
               

               Cow position:
               chr3:49678857-49679140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               62, 102
               

               Conread position:
               216-491
               

               Cow position:
               chr3:65413540-65413270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 12
               

               Conread position:
               216-491
               

               Cow position:
               chr3:65968890-65969175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-491
               

               Cow position:
               chr3:69849767-69849499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 62
               

               Conread position:
               216-491
               

               Cow position:
               chr3:71246772-71247033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               134, 12
               

               Conread position:
               216-491
               

               Cow position:
               chr3:71497411-71497130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 105
               

               Conread position:
               216-491
               

               Cow position:
               chr3:79292569-79292837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-491
               

               Cow position:
               chr3:80053799-80053533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               128, 62
               

               Conread position:
               216-492
               

               Cow position:
               chr3:55124543-55124271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 78
               

               Conread position:
               216-496
               

               Cow position:
               chr3:49218572-49218301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 12
               

               Conread position:
               216-496
               

               Cow position:
               chr3:53150062-53150333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 73
               

               Conread position:
               216-496
               

               Cow position:
               chr3:66610103-66609831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               222, 62
               

               Conread position:
               216-497
               

               Cow position:
               chr3:79208268-79207977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 171
               

               Conread position:
               216-497
               

               Cow position:
               chr3:84000347-84000623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 79
               

               Conread position:
               216-499
               

               Cow position:
               chr3:17895589-17895858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               211, 60
               

               Conread position:
               216-503
               

               Cow position:
               chr3:51255519-51255808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               41, 95
               

               Conread position:
               216-504
               

               Cow position:
               chr3:26065736-26066019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               62, 101
               

               Conread position:
               216-504
               

               Cow position:
               chr3:27544594-27544316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 78
               

               Conread position:
               216-508
               

               Cow position:
               chr3:26219326-26219027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               223
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               63, 17
               

               Conread position:
               216-508
               

               Cow position:
               chr3:53739456-53739161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 136
               

               Conread position:
               216-508
               

               Cow position:
               chr3:63179603-63179881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 76
               

               Conread position:
               217-362
               

               Cow position:
               chr3:45333864-45333721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               61, 11
               

               Conread position:
               217-430
               

               Cow position:
               chr3:48566931-48566724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               61, 113
               

               Conread position:
               217-431
               

               Cow position:
               chr3:17742245-17742450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               63, 37
               

               Conread position:
               217-435
               

               Cow position:
               chr3:65989810-65990027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               61, 199
               

               Conread position:
               217-439
               

               Cow position:
               chr3:12255216-12255431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               145, 49
               

               Conread position:
               217-459
               

               Cow position:
               chr3:6689727-6689974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               186
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               21, 224
               

               Conread position:
               217-459
               

               Cow position:
               chr3:50614375-50614615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               211, 60
               

               Conread position:
               217-460
               

               Cow position:
               chr3:45279193-45279441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               39, 31
               

               Conread position:
               217-464
               

               Cow position:
               chr3:73590262-73590015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 30
               

               Conread position:
               217-467
               

               Cow position:
               chr3:73460715-73460949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               61, 20
               

               Conread position:
               217-507
               

               Cow position:
               chr3:68647896-68648186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 221
               

               Conread position:
               217-508
               

               Cow position:
               chr3:20675143-20674850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               66, 43
               

               Conread position:
               218-407
               

               Cow position:
               chr3:11422484-11422665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               62, 33
               

               Conread position:
               218-412
               

               Cow position:
               chr3:11640171-11640360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               59, 74
               

               Conread position:
               218-416
               

               Cow position:
               chr3:5887772-5887970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               60, 156
               

               Conread position:
               218-428
               

               Cow position:
               chr3:22872315-22872104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 77
               

               Conread position:
               218-429
               

               Cow position:
               chr3:15081002-15080802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               60, 74
               

               Conread position:
               218-429
               

               Cow position:
               chr3:51604870-51604661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               60, 166
               

               Conread position:
               218-437
               

               Cow position:
               chr3:56582580-56582789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               60, 76
               

               Conread position:
               218-442
               

               Cow position:
               chr3:17937102-17936884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               60, 127
               

               Conread position:
               218-459
               

               Cow position:
               chr3:7566682-7566443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               193
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               60, 74
               

               Conread position:
               218-459
               

               Cow position:
               chr3:28675726-28675961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               60, 74
               

               Conread position:
               218-459
               

               Cow position:
               chr3:28898485-28898249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 10
               

               Conread position:
               218-459
               

               Cow position:
               chr3:47284575-47284810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 10
               

               Conread position:
               218-459
               

               Cow position:
               chr3:48269600-48269839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               60, 127
               

               Conread position:
               218-462
               

               Cow position:
               chr3:17222407-17222165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 59
               

               Conread position:
               218-462
               

               Cow position:
               chr3:37451806-37452051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               126, 47
               

               Conread position:
               218-464
               

               Cow position:
               chr3:2397046-2396800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               60, 125
               

               Conread position:
               218-464
               

               Cow position:
               chr3:5416494-5416241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 174
               

               Conread position:
               218-464
               

               Cow position:
               chr3:31206609-31206855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               60, 74
               

               Conread position:
               218-464
               

               Cow position:
               chr3:52863446-52863205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 10
               

               Conread position:
               218-464
               

               Cow position:
               chr3:53046920-53046680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 74
               

               Conread position:
               218-464
               

               Cow position:
               chr3:59798991-59799227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               210, 58
               

               Conread position:
               218-464
               

               Cow position:
               chr3:68586775-68587002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               214, 50
               

               Conread position:
               218-464
               

               Cow position:
               chr3:77227055-77227304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               186
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               59, 127
               

               Conread position:
               218-491
               

               Cow position:
               chr3:5101023-5100764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 18
               

               Conread position:
               218-491
               

               Cow position:
               chr3:20437908-20437648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               242, 10
               

               Conread position:
               218-491
               

               Cow position:
               chr3:30179819-30180094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 75
               

               Conread position:
               218-491
               

               Cow position:
               chr3:66375058-66375328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               97, 51
               

               Conread position:
               218-508
               

               Cow position:
               chr3:14552615-14552899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 77
               

               Conread position:
               219-342
               

               Cow position:
               chr3:9638855-9638736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               58, 69
               

               Conread position:
               219-407
               

               Cow position:
               chr3:68303066-68303251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               59, 148
               

               Conread position:
               219-415
               

               Cow position:
               chr3:61857234-61857433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               158
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               219-433
               

               Cow position:
               chr3:32597190-32596978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               59, 71
               

               Conread position:
               219-445
               

               Cow position:
               chr3:14430088-14429865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               59, 28
               

               Conread position:
               219-446
               

               Cow position:
               chr3:45214898-45214679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               59, 73
               

               Conread position:
               219-457
               

               Cow position:
               chr3:75080504-75080735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               59, 126
               

               Conread position:
               219-459
               

               Cow position:
               chr3:2506743-2506506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 211
               

               Conread position:
               219-459
               

               Cow position:
               chr3:33698459-33698705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 205
               

               Conread position:
               219-459
               

               Cow position:
               chr3:74621259-74621015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               59, 118
               

               Conread position:
               219-464
               

               Cow position:
               chr3:48362821-48363055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               186
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               59, 38
               

               Conread position:
               219-508
               

               Cow position:
               chr3:45881647-45881922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 73
               

               Conread position:
               220-347
               

               Cow position:
               chr3:40100936-40100808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               220-426
               

               Cow position:
               chr3:67165651-67165853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               58, 125
               

               Conread position:
               220-451
               

               Cow position:
               chr3:495505-495277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               58, 193
               

               Conread position:
               220-455
               

               Cow position:
               chr3:25691488-25691721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 103
               

               Conread position:
               220-459
               

               Cow position:
               chr3:18458917-18458684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               58, 34
               

               Conread position:
               220-459
               

               Cow position:
               chr3:39661709-39661482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               59, 19
               

               Conread position:
               220-461
               

               Cow position:
               chr3:51234357-51234117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 72
               

               Conread position:
               220-462
               

               Cow position:
               chr3:12286974-12287211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               192
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               58, 47
               

               Conread position:
               220-464
               

               Cow position:
               chr3:48241360-48241597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 74
               

               Conread position:
               220-477
               

               Cow position:
               chr3:14725036-14725295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               58, 72
               

               Conread position:
               221-429
               

               Cow position:
               chr3:79220590-79220796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               57, 71
               

               Conread position:
               221-449
               

               Cow position:
               chr3:59630759-59630538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               177
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               57, 73
               

               Conread position:
               221-457
               

               Cow position:
               chr3:48923773-48923549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               57, 81
               

               Conread position:
               221-458
               

               Cow position:
               chr3:83934255-83934481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               57, 26
               

               Conread position:
               221-464
               

               Cow position:
               chr3:39171744-39171501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 71
               

               Conread position:
               221-464
               

               Cow position:
               chr3:83490816-83491065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               222-342
               

               Cow position:
               chr3:21024896-21024779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               222-366
               

               Cow position:
               chr3:71488578-71488438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               56, 79
               

               Conread position:
               222-379
               

               Cow position:
               chr3:21302689-21302539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               56, 65
               

               Conread position:
               222-418
               

               Cow position:
               chr3:82473796-82473991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               56, 95
               

               Conread position:
               222-432
               

               Cow position:
               chr3:7366134-7365937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               222-441
               

               Cow position:
               chr3:77467675-77467892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               59, 74
               

               Conread position:
               222-448
               

               Cow position:
               chr3:56161048-56161272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               56, 74
               

               Conread position:
               222-451
               

               Cow position:
               chr3:45307675-45307902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               180
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               56, 128
               

               Conread position:
               222-459
               

               Cow position:
               chr3:14625647-14625416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               35, 56
               

               Conread position:
               222-459
               

               Cow position:
               chr3:36672262-36672017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               56, 207
               

               Conread position:
               222-464
               

               Cow position:
               chr3:7338033-7337803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               56, 132
               

               Conread position:
               222-464
               

               Cow position:
               chr3:31771439-31771661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               57, 69
               

               Conread position:
               222-464
               

               Cow position:
               chr3:46350400-46350653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               222-464
               

               Cow position:
               chr3:52607924-52608161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               59, 123
               

               Conread position:
               222-464
               

               Cow position:
               chr3:73759776-73759537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 32
               

               Conread position:
               222-465
               

               Cow position:
               chr3:18763635-18763876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               56, 69
               

               Conread position:
               222-491
               

               Cow position:
               chr3:16333547-16333805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               205
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               56, 70
               

               Conread position:
               222-491
               

               Cow position:
               chr3:82020103-82019831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               56, 124
               

               Conread position:
               222-499
               

               Cow position:
               chr3:20256941-20257229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               56, 266
               

               Conread position:
               223-338
               

               Cow position:
               chr3:2335024-2335140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               223-348
               

               Cow position:
               chr3:5536168-5536042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               223-375
               

               Cow position:
               chr3:84368628-84368482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               55, 69
               

               Conread position:
               223-385
               

               Cow position:
               chr3:54740130-54739969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               55, 91
               

               Conread position:
               223-423
               

               Cow position:
               chr3:30384554-30384358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 71
               

               Conread position:
               223-431
               

               Cow position:
               chr3:58158725-58158525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               57, 97
               

               Conread position:
               223-431
               

               Cow position:
               chr3:83442138-83441937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               55, 32
               

               Conread position:
               223-440
               

               Cow position:
               chr3:42489565-42489351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               55, 27
               

               Conread position:
               223-440
               

               Cow position:
               chr3:54881498-54881713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               55, 67
               

               Conread position:
               223-456
               

               Cow position:
               chr3:39970130-39969892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               181
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               55, 122
               

               Conread position:
               223-457
               

               Cow position:
               chr3:81471359-81471124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               187
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               55, 69
               

               Conread position:
               223-459
               

               Cow position:
               chr3:8604272-8604044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 71
               

               Conread position:
               223-459
               

               Cow position:
               chr3:23448389-23448163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               55, 66
               

               Conread position:
               223-459
               

               Cow position:
               chr3:30009168-30008934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               55, 86
               

               Conread position:
               223-459
               

               Cow position:
               chr3:41367242-41367006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 69
               

               Conread position:
               223-459
               

               Cow position:
               chr3:61143835-61144073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 131
               

               Conread position:
               223-459
               

               Cow position:
               chr3:68583261-68583030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 69
               

               Conread position:
               223-459
               

               Cow position:
               chr3:72168980-72168743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               17, 102
               

               Conread position:
               223-464
               

               Cow position:
               chr3:28692688-28692450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 55
               

               Conread position:
               223-464
               

               Cow position:
               chr3:80564702-80564945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               185
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               202, 121
               

               Conread position:
               223-465
               

               Cow position:
               chr3:4087424-4087179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 69
               

               Conread position:
               223-479
               

               Cow position:
               chr3:55272301-55272050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               55, 69
               

               Conread position:
               223-491
               

               Cow position:
               chr3:71237899-71238162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 37
               

               Conread position:
               224-429
               

               Cow position:
               chr3:3556287-3556498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               54, 17
               

               Conread position:
               224-429
               

               Cow position:
               chr3:7331374-7331170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               160
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               54, 121
               

               Conread position:
               224-430
               

               Cow position:
               chr3:74088431-74088225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 97
               

               Conread position:
               224-435
               

               Cow position:
               chr3:8716989-8717200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               54, 25
               

               Conread position:
               224-451
               

               Cow position:
               chr3:4864775-4864546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               224-458
               

               Cow position:
               chr3:61171767-61171535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               54, 92
               

               Conread position:
               224-459
               

               Cow position:
               chr3:11987073-11987303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               61, 70
               

               Conread position:
               224-462
               

               Cow position:
               chr3:5374076-5374309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 93
               

               Conread position:
               224-464
               

               Cow position:
               chr3:9843326-9843566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 127
               

               Conread position:
               224-464
               

               Cow position:
               chr3:56476425-56476661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 68
               

               Conread position:
               224-493
               

               Cow position:
               chr3:22820312-22820582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               54, 65
               

               Conread position:
               225-436
               

               Cow position:
               chr3:67044353-67044149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               53, 67
               

               Conread position:
               225-455
               

               Cow position:
               chr3:13353101-13353334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               53, 126
               

               Conread position:
               225-457
               

               Cow position:
               chr3:2680255-2680488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 212
               

               Conread position:
               225-459
               

               Cow position:
               chr3:18686660-18686880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               225-464
               

               Cow position:
               chr3:13507207-13507447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               53, 93
               

               Conread position:
               225-491
               

               Cow position:
               chr3:42177902-42178165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 92
               

               Conread position:
               226-400
               

               Cow position:
               chr3:18497767-18497934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               122, 52
               

               Conread position:
               226-451
               

               Cow position:
               chr3:26970570-26970793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               175
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               52, 68
               

               Conread position:
               226-459
               

               Cow position:
               chr3:2537996-2538231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               52, 92
               

               Conread position:
               226-463
               

               Cow position:
               chr3:16752508-16752280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               52, 66
               

               Conread position:
               226-464
               

               Cow position:
               chr3:52650788-52650549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               184
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               52, 77
               

               Conread position:
               226-476
               

               Cow position:
               chr3:23092238-23091983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               52, 125
               

               Conread position:
               226-486
               

               Cow position:
               chr3:48578586-48578841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               213
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               52, 41
               

               Conread position:
               227-430
               

               Cow position:
               chr3:7678417-7678613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               227-451
               

               Cow position:
               chr3:28904092-28904310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               197, 15
               

               Conread position:
               227-453
               

               Cow position:
               chr3:18725888-18725669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               52, 17
               

               Conread position:
               227-496
               

               Cow position:
               chr3:41328201-41328454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               51, 58
               

               Conread position:
               228-430
               

               Cow position:
               chr3:5045063-5044859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               50, 198
               

               Conread position:
               228-459
               

               Cow position:
               chr3:63332557-63332786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               50, 198
               

               Conread position:
               229-417
               

               Cow position:
               chr3:61361150-61361338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               31, 49
               

               Conread position:
               229-420
               

               Cow position:
               chr3:74233943-74234125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               229-438
               

               Cow position:
               chr3:31501095-31501302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               49, 91
               

               Conread position:
               231-464
               

               Cow position:
               chr3:74878839-74878610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               184
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               47, 24
               

               Conread position:
               232-454
               

               Cow position:
               chr3:15752877-15752662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               197, 46
               

               Conread position:
               232-458
               

               Cow position:
               chr3:16362987-16362762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               46, 85
               

               Conread position:
               232-459
               

               Cow position:
               chr3:15685167-15684947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               16, 71
               

               Conread position:
               232-464
               

               Cow position:
               chr3:27274283-27274510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               15, 47
               

               Conread position:
               232-464
               

               Cow position:
               chr3:52652323-52652102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 62
               

               Conread position:
               233-420
               

               Cow position:
               chr3:26894413-26894596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               45, 54
               

               Conread position:
               233-440
               

               Cow position:
               chr3:44932260-44932467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 118
               

               Conread position:
               233-451
               

               Cow position:
               chr3:79950481-79950259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               233-457
               

               Cow position:
               chr3:49327688-49327916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               13, 119
               

               Conread position:
               233-458
               

               Cow position:
               chr3:43233255-43233479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               173
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               45, 177
               

               Conread position:
               233-458
               

               Cow position:
               chr3:43571492-43571715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               45, 61
               

               Conread position:
               233-458
               

               Cow position:
               chr3:79340090-79339866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               45, 119
               

               Conread position:
               233-459
               

               Cow position:
               chr3:14717557-14717768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               14, 150
               

               Conread position:
               233-482
               

               Cow position:
               chr3:55947327-55947579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               45, 190
               

               Conread position:
               233-489
               

               Cow position:
               chr3:63315883-63316138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               47, 156
               

               Conread position:
               233-491
               

               Cow position:
               chr3:15052193-15051940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 54
               

               Conread position:
               233-503
               

               Cow position:
               chr3:55992119-55991843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               45, 97
               

               Conread position:
               233-508
               

               Cow position:
               chr3:58767031-58767287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               191, 45
               

               Conread position:
               234-465
               

               Cow position:
               chr3:68881359-68881136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               44, 20
               

               Conread position:
               235-462
               

               Cow position:
               chr3:53221768-53221989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               43, 57
               

               Conread position:
               237-430
               

               Cow position:
               chr3:49482953-49482762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               41, 57
               

               Conread position:
               237-440
               

               Cow position:
               chr3:30055690-30055492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               41, 57
               

               Conread position:
               237-440
               

               Cow position:
               chr3:35074437-35074636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               162
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               152, 39
               

               Conread position:
               237-444
               

               Cow position:
               chr3:77006261-77006450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               41, 53
               

               Conread position:
               237-464
               

               Cow position:
               chr3:115963-116168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               237-496
               

               Cow position:
               chr3:23445134-23444875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               206
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               194, 41
               

               Conread position:
               238-385
               

               Cow position:
               chr3:27553307-27553459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               238-464
               

               Cow position:
               chr3:59271308-59271522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               185, 40
               

               Conread position:
               239-398
               

               Cow position:
               chr3:78067379-78067220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               39, 8
               

               Conread position:
               239-459
               

               Cow position:
               chr3:55836071-55835853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               39, 105
               

               Conread position:
               239-462
               

               Cow position:
               chr3:12705801-12705566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               39, 115
               

               Conread position:
               239-501
               

               Cow position:
               chr3:60265479-60265239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               21, 40
               

               Conread position:
               241-464
               

               Cow position:
               chr3:83201768-83201546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 104
               

               Conread position:
               241-491
               

               Cow position:
               chr3:70334941-70334687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 14
               

               Conread position:
               242-440
               

               Cow position:
               chr3:43657950-43657752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               38, 103
               

               Conread position:
               242-448
               

               Cow position:
               chr3:48275587-48275797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               242-449
               

               Cow position:
               chr3:80922329-80922542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               36, 55
               

               Conread position:
               242-459
               

               Cow position:
               chr3:31077971-31077755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               25, 54
               

               Conread position:
               242-459
               

               Cow position:
               chr3:59885134-59885367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               242-495
               

               Cow position:
               chr3:8060893-8061141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               36, 47
               

               Conread position:
               243-427
               

               Cow position:
               chr3:4861451-4861625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               35, 49
               

               Conread position:
               243-430
               

               Cow position:
               chr3:71135550-71135737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               35, 102
               

               Conread position:
               243-459
               

               Cow position:
               chr3:34937602-34937821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               177
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               35, 49
               

               Conread position:
               244-435
               

               Cow position:
               chr3:29334751-29334563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               34, 56
               

               Conread position:
               244-464
               

               Cow position:
               chr3:27940365-27940159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               34, 50
               

               Conread position:
               246-441
               

               Cow position:
               chr3:188624-188815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               32, 61
               

               Conread position:
               246-464
               

               Cow position:
               chr3:17447843-17447633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               32, 46
               

               Conread position:
               246-464
               

               Cow position:
               chr3:31047184-31046972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               32, 19
               

               Conread position:
               246-491
               

               Cow position:
               chr3:11711718-11711973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 15
               

               Conread position:
               247-435
               

               Cow position:
               chr3:15192329-15192517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               7, 62
               

               Conread position:
               247-451
               

               Cow position:
               chr3:68156496-68156702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               31, 108
               

               Conread position:
               248-491
               

               Cow position:
               chr3:55106676-55106431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               30, 172
               

               Conread position:
               248-491
               

               Cow position:
               chr3:67930411-67930175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               7, 31
               

               Conread position:
               249-459
               

               Cow position:
               chr3:35153375-35153591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               19, 7
               

               Conread position:
               250-462
               

               Cow position:
               chr3:78092740-78092534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               28, 10
               

               Conread position:
               251-464
               

               Cow position:
               chr3:59333537-59333749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               27, 60
               

               Conread position:
               252-464
               

               Cow position:
               chr3:76015070-76015271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               26, 44
               

               Conread position:
               252-490
               

               Cow position:
               chr3:59621865-59621641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               26, 14
               

               Conread position:
               253-423
               

               Cow position:
               chr3:23215812-23215634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               253-452
               

               Cow position:
               chr3:77427178-77427363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               25, 41
               

               Conread position:
               253-458
               

               Cow position:
               chr3:53836913-53836719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               27, 41
               

               Conread position:
               253-459
               

               Cow position:
               chr3:68146064-68145869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               254-439
               

               Cow position:
               chr3:58533618-58533802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               24, 160
               

               Conread position:
               254-449
               

               Cow position:
               chr3:74119673-74119473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               254-464
               

               Cow position:
               chr3:15506220-15506428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               25, 91
               

               Conread position:
               254-464
               

               Cow position:
               chr3:22900220-22900016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               24, 129
               

               Conread position:
               255-451
               

               Cow position:
               chr3:26960821-26960622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               158
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               255-459
               

               Cow position:
               chr3:66866626-66866423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               23, 39
               

               Conread position:
               255-464
               

               Cow position:
               chr3:53240047-53240241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               256-451
               

               Cow position:
               chr3:13686024-13686219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               89, 21
               

               Conread position:
               256-451
               

               Cow position:
               chr3:49627588-49627394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               22, 52
               

               Conread position:
               256-451
               

               Cow position:
               chr3:72668420-72668224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 97
               

               Conread position:
               256-459
               

               Cow position:
               chr3:21051063-21050863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               89, 22
               

               Conread position:
               256-459
               

               Cow position:
               chr3:49287105-49287309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               256-459
               

               Cow position:
               chr3:80908070-80908279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               23, 38
               

               Conread position:
               256-464
               

               Cow position:
               chr3:56301573-56301371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               22, 89
               

               Conread position:
               258-464
               

               Cow position:
               chr3:83215030-83215241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               20, 36
               

               Conread position:
               259-459
               

               Cow position:
               chr3:2198660-2198857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               19, 33
               

               Conread position:
               259-459
               

               Cow position:
               chr3:56612134-56612335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               168, 0
               

               Conread position:
               259-477
               

               Cow position:
               chr3:6772820-6772599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               260-458
               

               Cow position:
               chr3:16656702-16656518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               18, 85
               

               Conread position:
               260-464
               

               Cow position:
               chr3:11063157-11063353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               18, 85
               

               Conread position:
               260-491
               

               Cow position:
               chr3:74134484-74134712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               18, 34
               

               Conread position:
               261-479
               

               Cow position:
               chr3:15859891-15859671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 92
               

               Conread position:
               262-459
               

               Cow position:
               chr3:55063087-55062897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               16, 30
               

               Conread position:
               263-491
               

               Cow position:
               chr3:78896430-78896655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               194, 14
               

               Conread position:
               264-491
               

               Cow position:
               chr3:35005560-35005784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               14, 59
               

               Conread position:
               265-415
               

               Cow position:
               chr3:25944861-25945014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               265-421
               

               Cow position:
               chr3:23265511-23265358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               13, 27
               

               Conread position:
               265-430
               

               Cow position:
               chr3:75534896-75535053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               13, 29
               

               Conread position:
               265-441
               

               Cow position:
               chr3:34556455-34556286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               265-459
               

               Cow position:
               chr3:46006247-46006044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               14, 59
               

               Conread position:
               265-482
               

               Cow position:
               chr3:45211079-45211296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               13, 39
               

               Conread position:
               265-491
               

               Cow position:
               chr3:4319494-4319719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               13, 105
               

               Conread position:
               266-396
               

               Cow position:
               chr3:5082857-5082727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               12, 79
               

               Conread position:
               266-432
               

               Cow position:
               chr3:25477597-25477760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               12, 79
               

               Conread position:
               266-437
               

               Cow position:
               chr3:70609407-70609575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               137
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               12, 79
               

               Conread position:
               266-445
               

               Cow position:
               chr3:43307751-43307569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 55
               

               Conread position:
               266-459
               

               Cow position:
               chr3:76713537-76713346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               12, 50
               

               Conread position:
               267-367
               

               Cow position:
               chr3:15153425-15153526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               267-432
               

               Cow position:
               chr3:10173349-10173186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               11, 84
               

               Conread position:
               267-458
               

               Cow position:
               chr3:62790234-62790034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               11, 105
               

               Conread position:
               267-464
               

               Cow position:
               chr3:3062348-3062547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               12, 25
               

               Conread position:
               267-476
               

               Cow position:
               chr3:25059859-25060072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               267-491
               

               Cow position:
               chr3:39328186-39328408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               13, 25
               

               Conread position:
               267-491
               

               Cow position:
               chr3:83845690-83845924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 25
               

               Conread position:
               268-482
               

               Cow position:
               chr3:21693728-21693946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               11, 144
               

               Conread position:
               269-459
               

               Cow position:
               chr3:36375760-36375562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               9, 117
               

               Conread position:
               272-450
               

               Cow position:
               chr3:38828554-38828732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               43, 48
               

               Conread position:
               274-481
               

               Cow position:
               chr3:67520382-67520172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               74, 17
               

               Conread position:
               277-406
               

               Cow position:
               chr3:20842063-20841936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               277-437
               

               Cow position:
               chr3:67698076-67698230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               277-459
               

               Cow position:
               chr3:27697186-27697004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               73, 158
               

               Conread position:
               277-459
               

               Cow position:
               chr3:83727454-83727277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               38, 42
               

               Conread position:
               277-464
               

               Cow position:
               chr3:57760295-57760477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               277-467
               

               Cow position:
               chr3:55712222-55712422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               278-440
               

               Cow position:
               chr3:75853537-75853374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               5, 18
               

               Conread position:
               278-464
               

               Cow position:
               chr3:3637980-3638164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               155, 0
               

               Conread position:
               279-459
               

               Cow position:
               chr3:14598745-14598923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               282-456
               

               Cow position:
               chr3:53095138-53094960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               283-432
               

               Cow position:
               chr3:10896631-10896777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               284-423
               

               Cow position:
               chr3:39606468-39606326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               285-464
               

               Cow position:
               chr3:70631819-70631997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               147, 65
               

               Conread position:
               286-460
               

               Cow position:
               chr3:7940755-7940577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               13, 66
               

               Conread position:
               286-464
               

               Cow position:
               chr3:23105565-23105383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               8, 59
               

               Conread position:
               287-459
               

               Cow position:
               chr3:38035790-38035616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               290-464
               

               Cow position:
               chr3:30221992-30222169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               55, 25
               

               Conread position:
               291-508
               

               Cow position:
               chr3:63269032-63269247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               133, 45
               

               Conread position:
               292-464
               

               Cow position:
               chr3:59596993-59597171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               136, 30
               

               Conread position:
               294-459
               

               Cow position:
               chr3:34294473-34294308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               134, 19
               

               Conread position:
               295-437
               

               Cow position:
               chr3:36418655-36418514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               124, 49
               

               Conread position:
               295-464
               

               Cow position:
               chr3:24872530-24872693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               94, 22
               

               Conread position:
               295-482
               

               Cow position:
               chr3:1453311-1453127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               53, 72
               

               Conread position:
               296-450
               

               Cow position:
               chr3:38078277-38078428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               135, 21
               

               Conread position:
               296-457
               

               Cow position:
               chr3:61894362-61894194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               35, 92
               

               Conread position:
               296-458
               

               Cow position:
               chr3:15904159-15903994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               296-459
               

               Cow position:
               chr3:54374049-54373886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               28, 132
               

               Conread position:
               296-459
               

               Cow position:
               chr3:55434143-55434307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               51, 37
               

               Conread position:
               296-459
               

               Cow position:
               chr3:83798027-83797860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               296-461
               

               Cow position:
               chr3:34176434-34176599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               110, 48
               

               Conread position:
               296-462
               

               Cow position:
               chr3:74079827-74079659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               142, 54
               

               Conread position:
               296-464
               

               Cow position:
               chr3:27212174-27212343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               131, 23
               

               Conread position:
               296-465
               

               Cow position:
               chr3:65380965-65381130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               132, 87
               

               Conread position:
               296-489
               

               Cow position:
               chr3:66884129-66883934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               139, 123
               

               Conread position:
               297-464
               

               Cow position:
               chr3:76268167-76267996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               55, 22
               

               Conread position:
               298-458
               

               Cow position:
               chr3:75687625-75687464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               298-459
               

               Cow position:
               chr3:57789443-57789607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               132, 58
               

               Conread position:
               298-464
               

               Cow position:
               chr3:61024490-61024322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               46, 38
               

               Conread position:
               298-465
               

               Cow position:
               chr3:34669914-34669747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               140
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               91, 86
               

               Conread position:
               298-478
               

               Cow position:
               chr3:83708154-83707979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               175, 19
               

               Conread position:
               299-458
               

               Cow position:
               chr3:53318218-53318374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               299-459
               

               Cow position:
               chr3:79271144-79270984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               126, 137
               

               Conread position:
               299-462
               

               Cow position:
               chr3:74502507-74502348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               52, 115
               

               Conread position:
               299-464
               

               Cow position:
               chr3:20678020-20677860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               90, 51
               

               Conread position:
               299-464
               

               Cow position:
               chr3:55319088-55318921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               128, 66
               

               Conread position:
               299-479
               

               Cow position:
               chr3:49790999-49790817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               22, 139
               

               Conread position:
               300-434
               

               Cow position:
               chr3:15751906-15751772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               300-453
               

               Cow position:
               chr3:20779928-20779781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               18, 51
               

               Conread position:
               300-458
               

               Cow position:
               chr3:79092579-79092420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               49, 81
               

               Conread position:
               300-479
               

               Cow position:
               chr3:57273882-57274055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               166, 44
               

               Conread position:
               301-432
               

               Cow position:
               chr3:40006200-40006331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 21
               

               Conread position:
               301-459
               

               Cow position:
               chr3:26739603-26739440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               301-459
               

               Cow position:
               chr3:59718659-59718816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               301-491
               

               Cow position:
               chr3:5365488-5365681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               43, 167
               

               Conread position:
               303-426
               

               Cow position:
               chr3:16891117-16891239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               303-438
               

               Cow position:
               chr3:26981883-26982018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               12, 17
               

               Conread position:
               305-428
               

               Cow position:
               chr3:76922842-76922720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               305-451
               

               Cow position:
               chr3:78739676-78739824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               13, 46
               

               Conread position:
               305-464
               

               Cow position:
               chr3:58765255-58765096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               127, 14
               

               Conread position:
               305-464
               

               Cow position:
               chr3:70762302-70762141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               123, 45
               

               Conread position:
               305-464
               

               Cow position:
               chr3:81359292-81359128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               39, 111
               

               Conread position:
               306-464
               

               Cow position:
               chr3:3913629-3913463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               307-464
               

               Cow position:
               chr3:62046485-62046642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               127, 43
               

               Conread position:
               308-426
               

               Cow position:
               chr3:19792716-19792834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               309-489
               

               Cow position:
               chr3:55819572-55819764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               319-423
               

               Cow position:
               chr3:51149443-51149338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               319-459
               

               Cow position:
               chr3:31850535-31850399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               319-461
               

               Cow position:
               chr3:24616002-24615866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               319-464
               

               Cow position:
               chr3:23037795-23037643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               319-464
               

               Cow position:
               chr3:26874425-26874575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               42, 9
               

               Conread position:
               322-415
               

               Cow position:
               chr3:83662693-83662600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               79
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               322-433
               

               Cow position:
               chr3:54557456-54557568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               322-456
               

               Cow position:
               chr3:15992552-15992689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               106, 28
               

               Conread position:
               322-459
               

               Cow position:
               chr3:48810799-48810671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               322-491
               

               Cow position:
               chr3:59884235-59884061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               324-459
               

               Cow position:
               chr3:69792838-69792972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               28, 86
               

               Conread position:
               325-441
               

               Cow position:
               chr3:18056284-18056400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               105, 25
               

               Conread position:
               325-461
               

               Cow position:
               chr3:59034874-59035016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               25, 118
               

               Conread position:
               325-464
               

               Cow position:
               chr3:2851054-2850915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               37, 55
               

               Conread position:
               326-464
               

               Cow position:
               chr3:77581950-77582088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               98, 110
               

               Conread position:
               327-459
               

               Cow position:
               chr3:24468536-24468407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               327-464
               

               Cow position:
               chr3:8733513-8733375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               57, 90
               

               Conread position:
               327-464
               

               Cow position:
               chr3:53192579-53192447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               327-491
               

               Cow position:
               chr3:54100880-54100718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               7, 105
               

               Conread position:
               328-456
               

               Cow position:
               chr3:59317624-59317498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               104, 53
               

               Conread position:
               328-464
               

               Cow position:
               chr3:32184177-32184039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               98, 24
               

               Conread position:
               328-491
               

               Cow position:
               chr3:12978773-12978609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               138, 107
               

               Conread position:
               329-459
               

               Cow position:
               chr3:71478436-71478569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               329-491
               

               Cow position:
               chr3:24935215-24935373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               137, 21
               

               Conread position:
               330-450
               

               Cow position:
               chr3:74515853-74515733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               92, 104
               

               Conread position:
               330-455
               

               Cow position:
               chr3:30907502-30907373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               81, 38
               

               Conread position:
               330-456
               

               Cow position:
               chr3:81039900-81039777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               330-459
               

               Cow position:
               chr3:19793747-19793616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               16, 84
               

               Conread position:
               331-459
               

               Cow position:
               chr3:15231875-15232004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               114
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               20, 99
               

               Conread position:
               331-506
               

               Cow position:
               chr3:46541981-46541807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               135, 19
               

               Conread position:
               332-430
               

               Cow position:
               chr3:29172479-29172573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               85
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               332-459
               

               Cow position:
               chr3:23920582-23920455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               89, 105
               

               Conread position:
               332-459
               

               Cow position:
               chr3:70334117-70333991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               334-478
               

               Cow position:
               chr3:6900482-6900620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               337-459
               

               Cow position:
               chr3:5366623-5366743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               339-459
               

               Cow position:
               chr3:1534766-1534642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               339-491
               

               Cow position:
               chr3:43726931-43727087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               88, 33
               

               Conread position:
               342-479
               

               Cow position:
               chr3:15790417-15790550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               127, 42
               

               Conread position:
               343-459
               

               Cow position:
               chr3:76169427-76169310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               343-459
               

               Cow position:
               chr3:80953504-80953622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               343-464
               

               Cow position:
               chr3:71238331-71238454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               343-491
               

               Cow position:
               chr3:3889709-3889559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               86, 56
               

               Conread position:
               343-491
               

               Cow position:
               chr3:73820512-73820361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               91, 56
               

               Conread position:
               344-464
               

               Cow position:
               chr3:80468816-80468697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               345-476
               

               Cow position:
               chr3:11198916-11198790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               128, 39
               

               Conread position:
               346-462
               

               Cow position:
               chr3:17235348-17235236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               347-499
               

               Cow position:
               chr3:32457062-32457209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               119, 82
               

               Conread position:
               347-502
               

               Cow position:
               chr3:28323044-28323197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               76, 35
               

               Conread position:
               351-464
               

               Cow position:
               chr3:7661718-7661835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               352-457
               

               Cow position:
               chr3:84175959-84175851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               353-458
               

               Cow position:
               chr3:22509894-22510000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               356-459
               

               Cow position:
               chr3:3649347-3649248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               88
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               69, 0
               
Show alignments to all cow chromosomes.
Conread position:	33-464
Cow position:	chr3:64171992-64172419 (view UCSC Genome Browser custom track)
Alignm length:	439
Alignm identity:	258
Alignm E-value:	4e-37
Alignm gaps (pig, cow):	34, 189
Conread position:	122-362
Cow position:	chr3:40753802-40754031 (view UCSC Genome Browser custom track)
Alignm length:	242
Alignm identity:	166
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	83, 21
Conread position:	138-493
Cow position:	chr3:14602055-14601701 (view UCSC Genome Browser custom track)
Alignm length:	360
Alignm identity:	262
Alignm E-value:	0
Alignm gaps (pig, cow):	29, 77
Conread position:	141-459
Cow position:	chr3:2015421-2015746 (view UCSC Genome Browser custom track)
Alignm length:	338
Alignm identity:	236
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	35, 95
Conread position:	148-366
Cow position:	chr3:8901087-8901300 (view UCSC Genome Browser custom track)
Alignm length:	222
Alignm identity:	160
Alignm E-value:	5e-28
Alignm gaps (pig, cow):	62, 33
Conread position:	150-418
Cow position:	chr3:66885368-66885108 (view UCSC Genome Browser custom track)
Alignm length:	271
Alignm identity:	190
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	67, 17
Conread position:	155-508
Cow position:	chr3:64281263-64280906 (view UCSC Genome Browser custom track)
Alignm length:	361
Alignm identity:	261
Alignm E-value:	0
Alignm gaps (pig, cow):	20, 63
Conread position:	157-425
Cow position:	chr3:11949678-11949416 (view UCSC Genome Browser custom track)
Alignm length:	275
Alignm identity:	194
Alignm E-value:	6e-30
Alignm gaps (pig, cow):	10, 19
Conread position:	166-410
Cow position:	chr3:51609497-51609746 (view UCSC Genome Browser custom track)
Alignm length:	251
Alignm identity:	190
Alignm E-value:	2.8026e-45
Alignm gaps (pig, cow):	12, 8
Conread position:	166-461
Cow position:	chr3:38691722-38691432 (view UCSC Genome Browser custom track)
Alignm length:	302
Alignm identity:	232
Alignm E-value:	0
Alignm gaps (pig, cow):	49, 30
Conread position:	167-464
Cow position:	chr3:14633300-14633004 (view UCSC Genome Browser custom track)
Alignm length:	303
Alignm identity:	214
Alignm E-value:	5.99994e-41
Alignm gaps (pig, cow):	111, 61
Conread position:	169-459
Cow position:	chr3:33327388-33327683 (view UCSC Genome Browser custom track)
Alignm length:	303
Alignm identity:	209
Alignm E-value:	5e-29
Alignm gaps (pig, cow):	7, 15
Conread position:	173-462
Cow position:	chr3:42480313-42480597 (view UCSC Genome Browser custom track)
Alignm length:	297
Alignm identity:	200
Alignm E-value:	9e-24
Alignm gaps (pig, cow):	5, 30
Conread position:	174-462
Cow position:	chr3:3738179-3738460 (view UCSC Genome Browser custom track)
Alignm length:	293
Alignm identity:	208
Alignm E-value:	4e-36
Alignm gaps (pig, cow):	37, 56
Conread position:	175-334
Cow position:	chr3:53508072-53508231 (view UCSC Genome Browser custom track)
Alignm length:	162
Alignm identity:	120
Alignm E-value:	9e-24
Alignm gaps (pig, cow):	59, 24
Conread position:	175-491
Cow position:	chr3:28908497-28908195 (view UCSC Genome Browser custom track)
Alignm length:	320
Alignm identity:	237
Alignm E-value:	0
Alignm gaps (pig, cow):	261, 26
Conread position:	177-352
Cow position:	chr3:202742-202562 (view UCSC Genome Browser custom track)
Alignm length:	182
Alignm identity:	130
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	25, 66
Conread position:	177-378
Cow position:	chr3:12979217-12979420 (view UCSC Genome Browser custom track)
Alignm length:	207
Alignm identity:	148
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	45, 33
Conread position:	177-382
Cow position:	chr3:14280534-14280744 (view UCSC Genome Browser custom track)
Alignm length:	216
Alignm identity:	153
Alignm E-value:	7e-21
Alignm gaps (pig, cow):	13, 116
Conread position:	178-440
Cow position:	chr3:5456554-5456283 (view UCSC Genome Browser custom track)
Alignm length:	272
Alignm identity:	179
Alignm E-value:	9e-24
Alignm gaps (pig, cow):	25, 0