Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8060J09.5
        

               Conread position:
               118-491
               

               Cow position:
               chr5:1246960-1247324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               21, 103
               

               Conread position:
               148-464
               

               Cow position:
               chr5:8024473-8024164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 11
               

               Conread position:
               158-479
               

               Cow position:
               chr5:37646832-37646498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 179
               

               Conread position:
               161-362
               

               Cow position:
               chr5:27306044-27306246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               35, 9
               

               Conread position:
               161-438
               

               Cow position:
               chr5:41636601-41636871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               56, 68
               

               Conread position:
               166-375
               

               Cow position:
               chr5:57626537-57626745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               36, 132
               

               Conread position:
               166-434
               

               Cow position:
               chr5:40595270-40595011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               44, 33
               

               Conread position:
               166-435
               

               Cow position:
               chr5:32963897-32963633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 30
               

               Conread position:
               166-452
               

               Cow position:
               chr5:29560139-29560423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               30, 66
               

               Conread position:
               166-491
               

               Cow position:
               chr5:54350633-54350303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 137
               

               Conread position:
               167-464
               

               Cow position:
               chr5:39447796-39447506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 8
               

               Conread position:
               170-432
               

               Cow position:
               chr5:29504849-29505105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               63, 13
               

               Conread position:
               174-431
               

               Cow position:
               chr5:19905541-19905273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               15, 187
               

               Conread position:
               174-444
               

               Cow position:
               chr5:7740561-7740286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               127, 32
               

               Conread position:
               174-464
               

               Cow position:
               chr5:34115402-34115682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 106
               

               Conread position:
               177-353
               

               Cow position:
               chr5:24933951-24934128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               40, 5
               

               Conread position:
               178-381
               

               Cow position:
               chr5:54875937-54875734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               24, 11
               

               Conread position:
               178-459
               

               Cow position:
               chr5:60952402-60952685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               15, 34
               

               Conread position:
               178-496
               

               Cow position:
               chr5:16206402-16206093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               241
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               12, 75
               

               Conread position:
               180-347
               

               Cow position:
               chr5:37668623-37668793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 115
               

               Conread position:
               180-440
               

               Cow position:
               chr5:22934705-22934449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               98, 8
               

               Conread position:
               180-464
               

               Cow position:
               chr5:47601562-47601841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               212
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               22, 8
               

               Conread position:
               182-491
               

               Cow position:
               chr5:58855856-58856161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 33
               

               Conread position:
               183-456
               

               Cow position:
               chr5:34463837-34463557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               35, 27
               

               Conread position:
               186-458
               

               Cow position:
               chr5:15598478-15598212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               205
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               92, 29
               

               Conread position:
               187-385
               

               Cow position:
               chr5:38273829-38274027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               32, 9
               

               Conread position:
               189-491
               

               Cow position:
               chr5:5855636-5855916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               89, 108
               

               Conread position:
               190-458
               

               Cow position:
               chr5:17812900-17812635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               67, 196
               

               Conread position:
               190-459
               

               Cow position:
               chr5:65887256-65886984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 19
               

               Conread position:
               201-351
               

               Cow position:
               chr5:26541060-26541208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               8, 96
               

               Conread position:
               201-459
               

               Cow position:
               chr5:27103021-27102770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               9, 93
               

               Conread position:
               201-464
               

               Cow position:
               chr5:2309796-2309527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 208
               

               Conread position:
               201-464
               

               Cow position:
               chr5:42744563-42744815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               204
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               77, 9
               

               Conread position:
               201-491
               

               Cow position:
               chr5:65588478-65588757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               77, 9
               

               Conread position:
               205-459
               

               Cow position:
               chr5:26262901-26262650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 60
               

               Conread position:
               206-464
               

               Cow position:
               chr5:6572525-6572775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               72, 139
               

               Conread position:
               208-350
               

               Cow position:
               chr5:50573531-50573672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               9, 109
               

               Conread position:
               208-381
               

               Cow position:
               chr5:25225874-25225706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               9, 88
               

               Conread position:
               208-410
               

               Cow position:
               chr5:7498185-7497981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               208-423
               

               Cow position:
               chr5:59303493-59303294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               9, 21
               

               Conread position:
               208-434
               

               Cow position:
               chr5:62027168-62026950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               70, 5
               

               Conread position:
               208-435
               

               Cow position:
               chr5:33467266-33467043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               9, 85
               

               Conread position:
               208-437
               

               Cow position:
               chr5:44752535-44752316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               183
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               9, 21
               

               Conread position:
               208-449
               

               Cow position:
               chr5:9083112-9083353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               9, 24
               

               Conread position:
               208-455
               

               Cow position:
               chr5:64844342-64844099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               9, 21
               

               Conread position:
               208-456
               

               Cow position:
               chr5:58005019-58005267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               9, 21
               

               Conread position:
               208-457
               

               Cow position:
               chr5:22839698-22839447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               9, 59
               

               Conread position:
               208-457
               

               Cow position:
               chr5:47871276-47871018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               208-457
               

               Cow position:
               chr5:48519407-48519655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               13, 30
               

               Conread position:
               208-458
               

               Cow position:
               chr5:14314297-14314551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 14
               

               Conread position:
               208-458
               

               Cow position:
               chr5:35208036-35208287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 144
               

               Conread position:
               208-459
               

               Cow position:
               chr5:41531314-41531059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               208-464
               

               Cow position:
               chr5:42845825-42845564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               210
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               9, 30
               

               Conread position:
               208-464
               

               Cow position:
               chr5:44994262-44994011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 21
               

               Conread position:
               208-464
               

               Cow position:
               chr5:74015715-74015971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               9, 26
               

               Conread position:
               208-469
               

               Cow position:
               chr5:14420570-14420306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 169
               

               Conread position:
               208-477
               

               Cow position:
               chr5:68871967-68872235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               9, 47
               

               Conread position:
               209-348
               

               Cow position:
               chr5:30347185-30347044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               209-357
               

               Cow position:
               chr5:34923331-34923192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               8, 51
               

               Conread position:
               209-359
               

               Cow position:
               chr5:60947994-60948143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               8, 79
               

               Conread position:
               209-363
               

               Cow position:
               chr5:45192017-45191860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               209-409
               

               Cow position:
               chr5:12672251-12672057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               8, 79
               

               Conread position:
               209-412
               

               Cow position:
               chr5:14630132-14629928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               8, 29
               

               Conread position:
               209-418
               

               Cow position:
               chr5:58229479-58229687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               8, 72
               

               Conread position:
               209-419
               

               Cow position:
               chr5:56201345-56201141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               8, 90
               

               Conread position:
               209-423
               

               Cow position:
               chr5:1105095-1104875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               209-426
               

               Cow position:
               chr5:26561928-26562146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               8, 145
               

               Conread position:
               209-433
               

               Cow position:
               chr5:54869193-54869416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               209-437
               

               Cow position:
               chr5:26099594-26099377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               8, 31
               

               Conread position:
               209-439
               

               Cow position:
               chr5:2918256-2918485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               69, 207
               

               Conread position:
               209-439
               

               Cow position:
               chr5:12803271-12803516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               8, 137
               

               Conread position:
               209-440
               

               Cow position:
               chr5:45940831-45940609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               8, 58
               

               Conread position:
               209-451
               

               Cow position:
               chr5:18902636-18902878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               8, 40
               

               Conread position:
               209-451
               

               Cow position:
               chr5:51502788-51503027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               8, 107
               

               Conread position:
               209-457
               

               Cow position:
               chr5:20974668-20974423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               8, 54
               

               Conread position:
               209-459
               

               Cow position:
               chr5:34885380-34885139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               8, 70
               

               Conread position:
               209-459
               

               Cow position:
               chr5:34887422-34887175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               8, 35
               

               Conread position:
               209-459
               

               Cow position:
               chr5:46798028-46798268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               8, 48
               

               Conread position:
               209-459
               

               Cow position:
               chr5:75230460-75230699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               141, 70
               

               Conread position:
               209-460
               

               Cow position:
               chr5:32339199-32338941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               8, 20
               

               Conread position:
               209-462
               

               Cow position:
               chr5:43474623-43474872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 84
               

               Conread position:
               209-464
               

               Cow position:
               chr5:31145002-31144758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               15, 43
               

               Conread position:
               209-464
               

               Cow position:
               chr5:34915918-34916160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               8, 20
               

               Conread position:
               209-464
               

               Cow position:
               chr5:45845919-45845662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               195
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               8, 20
               

               Conread position:
               209-464
               

               Cow position:
               chr5:48828923-48829183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               8, 186
               

               Conread position:
               209-464
               

               Cow position:
               chr5:50637606-50637855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               202
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               8, 20
               

               Conread position:
               209-464
               

               Cow position:
               chr5:64176345-64176097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               7, 137
               

               Conread position:
               209-464
               

               Cow position:
               chr5:74643885-74643646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               8, 20
               

               Conread position:
               209-508
               

               Cow position:
               chr5:16894000-16893697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 137
               

               Conread position:
               210-332
               

               Cow position:
               chr5:44735150-44735028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               68, 92
               

               Conread position:
               210-359
               

               Cow position:
               chr5:25935728-25935875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               68, 38
               

               Conread position:
               210-384
               

               Cow position:
               chr5:33537668-33537836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               68, 82
               

               Conread position:
               210-393
               

               Cow position:
               chr5:15462492-15462672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               68, 40
               

               Conread position:
               210-410
               

               Cow position:
               chr5:4347937-4347754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               16, 64
               

               Conread position:
               210-426
               

               Cow position:
               chr5:34678669-34678883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               66, 33
               

               Conread position:
               210-430
               

               Cow position:
               chr5:5201694-5201905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               14, 7
               

               Conread position:
               210-430
               

               Cow position:
               chr5:6575809-6575597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               68, 18
               

               Conread position:
               210-431
               

               Cow position:
               chr5:57126789-57127008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               9, 76
               

               Conread position:
               210-435
               

               Cow position:
               chr5:1398308-1398079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               61, 18
               

               Conread position:
               210-437
               

               Cow position:
               chr5:29771292-29771517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               68, 135
               

               Conread position:
               210-438
               

               Cow position:
               chr5:16668351-16668562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               68, 106
               

               Conread position:
               210-438
               

               Cow position:
               chr5:39695430-39695650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               23, 8
               

               Conread position:
               210-439
               

               Cow position:
               chr5:8178956-8179184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               68, 206
               

               Conread position:
               210-447
               

               Cow position:
               chr5:55176663-55176903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 20
               

               Conread position:
               210-451
               

               Cow position:
               chr5:360168-359927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               73, 23
               

               Conread position:
               210-459
               

               Cow position:
               chr5:17027872-17028119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               67, 106
               

               Conread position:
               210-459
               

               Cow position:
               chr5:30639076-30638839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 99
               

               Conread position:
               210-459
               

               Cow position:
               chr5:31660863-31660633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               66, 118
               

               Conread position:
               210-459
               

               Cow position:
               chr5:72903450-72903208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               195
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               68, 82
               

               Conread position:
               210-461
               

               Cow position:
               chr5:4617151-4617395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               68, 98
               

               Conread position:
               210-464
               

               Cow position:
               chr5:14904293-14904040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               68, 23
               

               Conread position:
               210-464
               

               Cow position:
               chr5:20783402-20783649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               68, 84
               

               Conread position:
               210-464
               

               Cow position:
               chr5:30276469-30276719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 137
               

               Conread position:
               210-464
               

               Cow position:
               chr5:32956316-32956065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               12, 47
               

               Conread position:
               210-464
               

               Cow position:
               chr5:41546116-41545864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               60, 85
               

               Conread position:
               210-464
               

               Cow position:
               chr5:49362213-49361963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 37
               

               Conread position:
               210-464
               

               Cow position:
               chr5:65941477-65941221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 143
               

               Conread position:
               210-464
               

               Cow position:
               chr5:69337606-69337849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               68, 31
               

               Conread position:
               210-469
               

               Cow position:
               chr5:43738174-43737921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               195
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               68, 84
               

               Conread position:
               210-489
               

               Cow position:
               chr5:39258318-39258564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               68, 20
               

               Conread position:
               210-491
               

               Cow position:
               chr5:37190322-37190039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               26, 119
               

               Conread position:
               210-508
               

               Cow position:
               chr5:56467478-56467765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               54, 86
               

               Conread position:
               211-382
               

               Cow position:
               chr5:62261650-62261812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               67, 17
               

               Conread position:
               211-457
               

               Cow position:
               chr5:32140928-32140686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               67, 50
               

               Conread position:
               211-458
               

               Cow position:
               chr5:63964394-63964146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               193
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               64, 175
               

               Conread position:
               211-459
               

               Cow position:
               chr5:54086315-54086565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               68, 22
               

               Conread position:
               211-496
               

               Cow position:
               chr5:58320684-58320407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               6, 85
               

               Conread position:
               212-380
               

               Cow position:
               chr5:51071053-51071225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               5, 28
               

               Conread position:
               212-407
               

               Cow position:
               chr5:37366676-37366872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               158
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               5, 134
               

               Conread position:
               212-422
               

               Cow position:
               chr5:6683569-6683369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               5, 65
               

               Conread position:
               212-440
               

               Cow position:
               chr5:70582119-70581892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               5, 81
               

               Conread position:
               212-458
               

               Cow position:
               chr5:32394379-32394622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               12, 67
               

               Conread position:
               212-459
               

               Cow position:
               chr5:6130132-6130378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               66, 82
               

               Conread position:
               212-464
               

               Cow position:
               chr5:20779604-20779366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               10, 82
               

               Conread position:
               212-464
               

               Cow position:
               chr5:51490975-51490735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               5, 44
               

               Conread position:
               212-477
               

               Cow position:
               chr5:59873627-59873369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               5, 71
               

               Conread position:
               212-492
               

               Cow position:
               chr5:54713959-54713672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               5, 98
               

               Conread position:
               213-422
               

               Cow position:
               chr5:5848406-5848203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               65, 74
               

               Conread position:
               213-435
               

               Cow position:
               chr5:24616339-24616118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               65, 31
               

               Conread position:
               213-458
               

               Cow position:
               chr5:26094388-26094143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               65, 8
               

               Conread position:
               213-459
               

               Cow position:
               chr5:21040193-21039954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 64
               

               Conread position:
               213-459
               

               Cow position:
               chr5:49820923-49821164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 63
               

               Conread position:
               213-461
               

               Cow position:
               chr5:35969323-35969560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 79
               

               Conread position:
               213-462
               

               Cow position:
               chr5:51315066-51314817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               16, 131
               

               Conread position:
               213-479
               

               Cow position:
               chr5:62142451-62142721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 79
               

               Conread position:
               214-314
               

               Cow position:
               chr5:35683853-35683954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               214-348
               

               Cow position:
               chr5:66119471-66119336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               214-349
               

               Cow position:
               chr5:22068891-22069027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               214-400
               

               Cow position:
               chr5:12563224-12563042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               55, 14
               

               Conread position:
               214-407
               

               Cow position:
               chr5:54111700-54111893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               62, 104
               

               Conread position:
               214-437
               

               Cow position:
               chr5:9234299-9234075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               27, 8
               

               Conread position:
               214-438
               

               Cow position:
               chr5:9430677-9430461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               62, 79
               

               Conread position:
               214-438
               

               Cow position:
               chr5:30302680-30302894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               64, 23
               

               Conread position:
               214-438
               

               Cow position:
               chr5:35684716-35684938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               64, 131
               

               Conread position:
               214-439
               

               Cow position:
               chr5:26505624-26505398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               214-440
               

               Cow position:
               chr5:55088927-55089143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               64, 23
               

               Conread position:
               214-442
               

               Cow position:
               chr5:35145134-35145354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 78
               

               Conread position:
               214-444
               

               Cow position:
               chr5:27690277-27690049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               62, 90
               

               Conread position:
               214-446
               

               Cow position:
               chr5:36679658-36679425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               214-451
               

               Cow position:
               chr5:709344-709108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               64, 38
               

               Conread position:
               214-452
               

               Cow position:
               chr5:41532389-41532149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               40, 116
               

               Conread position:
               214-456
               

               Cow position:
               chr5:17063312-17063064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 71
               

               Conread position:
               214-456
               

               Cow position:
               chr5:64823531-64823290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 101
               

               Conread position:
               214-459
               

               Cow position:
               chr5:24348893-24349131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 78
               

               Conread position:
               214-459
               

               Cow position:
               chr5:27411608-27411377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               56, 30
               

               Conread position:
               214-459
               

               Cow position:
               chr5:31480935-31481172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               15, 65
               

               Conread position:
               214-462
               

               Cow position:
               chr5:13536939-13537166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               62, 14
               

               Conread position:
               214-464
               

               Cow position:
               chr5:26467402-26467655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               191
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               64, 25
               

               Conread position:
               214-464
               

               Cow position:
               chr5:28229939-28230191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               64, 78
               

               Conread position:
               214-464
               

               Cow position:
               chr5:34300707-34300948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               201
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               15, 64
               

               Conread position:
               214-464
               

               Cow position:
               chr5:56070635-56070888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               64, 19
               

               Conread position:
               214-465
               

               Cow position:
               chr5:56433583-56433837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 16
               

               Conread position:
               214-478
               

               Cow position:
               chr5:75437115-75436842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 106
               

               Conread position:
               214-482
               

               Cow position:
               chr5:30487030-30487287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               212
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               192, 14
               

               Conread position:
               214-482
               

               Cow position:
               chr5:76311128-76311415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               64, 26
               

               Conread position:
               214-491
               

               Cow position:
               chr5:28224237-28224511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 14
               

               Conread position:
               215-464
               

               Cow position:
               chr5:43992108-43992353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 46
               

               Conread position:
               215-493
               

               Cow position:
               chr5:12323018-12322744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               63, 77
               

               Conread position:
               216-334
               

               Cow position:
               chr5:60183309-60183424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-341
               

               Cow position:
               chr5:62378286-62378410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               62, 11
               

               Conread position:
               216-346
               

               Cow position:
               chr5:19969248-19969117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-346
               

               Cow position:
               chr5:68715617-68715744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               60, 76
               

               Conread position:
               216-348
               

               Cow position:
               chr5:27011078-27011210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               62, 32
               

               Conread position:
               216-348
               

               Cow position:
               chr5:46023394-46023266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-348
               

               Cow position:
               chr5:46080472-46080344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-348
               

               Cow position:
               chr5:46129996-46129869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-356
               

               Cow position:
               chr5:46754511-46754654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-356
               

               Cow position:
               chr5:67212162-67212303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-357
               

               Cow position:
               chr5:34915204-34915066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               54, 99
               

               Conread position:
               216-358
               

               Cow position:
               chr5:15088971-15089115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               64, 13
               

               Conread position:
               216-358
               

               Cow position:
               chr5:19751636-19751767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-359
               

               Cow position:
               chr5:26133290-26133148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-361
               

               Cow position:
               chr5:51360729-51360878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               216-362
               

               Cow position:
               chr5:18079079-18078932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               62, 140
               

               Conread position:
               216-362
               

               Cow position:
               chr5:36479757-36479611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               216-362
               

               Cow position:
               chr5:70050536-70050681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               62, 116
               

               Conread position:
               216-366
               

               Cow position:
               chr5:15412476-15412629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-374
               

               Cow position:
               chr5:20691675-20691532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               216-375
               

               Cow position:
               chr5:70102024-70101866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               61, 12
               

               Conread position:
               216-377
               

               Cow position:
               chr5:41981185-41981338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               216-377
               

               Cow position:
               chr5:61455538-61455700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-379
               

               Cow position:
               chr5:60210356-60210184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-380
               

               Cow position:
               chr5:2851098-2851262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-381
               

               Cow position:
               chr5:14703184-14703021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               12, 137
               

               Conread position:
               216-381
               

               Cow position:
               chr5:15363674-15363839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               63, 129
               

               Conread position:
               216-381
               

               Cow position:
               chr5:54530766-54530928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               62, 129
               

               Conread position:
               216-381
               

               Cow position:
               chr5:66281009-66280846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               6, 76
               

               Conread position:
               216-381
               

               Cow position:
               chr5:66297022-66297183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               60, 107
               

               Conread position:
               216-382
               

               Cow position:
               chr5:28035494-28035657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               61, 76
               

               Conread position:
               216-384
               

               Cow position:
               chr5:39418999-39418842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-393
               

               Cow position:
               chr5:35989100-35989278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               67, 12
               

               Conread position:
               216-395
               

               Cow position:
               chr5:7193216-7193385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               216-400
               

               Cow position:
               chr5:38853143-38853330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-402
               

               Cow position:
               chr5:37814407-37814588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               62, 71
               

               Conread position:
               216-404
               

               Cow position:
               chr5:62678442-62678630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               62, 24
               

               Conread position:
               216-405
               

               Cow position:
               chr5:63917626-63917441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               62, 17
               

               Conread position:
               216-406
               

               Cow position:
               chr5:18113789-18113604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               60, 12
               

               Conread position:
               216-406
               

               Cow position:
               chr5:44054254-44054065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               62, 117
               

               Conread position:
               216-406
               

               Cow position:
               chr5:59133656-59133466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               62, 106
               

               Conread position:
               216-406
               

               Cow position:
               chr5:59471682-59471492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               62, 106
               

               Conread position:
               216-407
               

               Cow position:
               chr5:50425694-50425501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               60, 89
               

               Conread position:
               216-408
               

               Cow position:
               chr5:48178892-48178705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               62, 34
               

               Conread position:
               216-412
               

               Cow position:
               chr5:6033022-6033210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               61, 77
               

               Conread position:
               216-413
               

               Cow position:
               chr5:59438951-59439146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               62, 169
               

               Conread position:
               216-415
               

               Cow position:
               chr5:40889500-40889306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               62, 79
               

               Conread position:
               216-415
               

               Cow position:
               chr5:50729279-50729473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               62, 85
               

               Conread position:
               216-417
               

               Cow position:
               chr5:55985766-55985568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               62, 136
               

               Conread position:
               216-417
               

               Cow position:
               chr5:63388578-63388775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               162
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               62, 129
               

               Conread position:
               216-425
               

               Cow position:
               chr5:30816499-30816708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               62, 117
               

               Conread position:
               216-426
               

               Cow position:
               chr5:58519615-58519415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               62, 41
               

               Conread position:
               216-426
               

               Cow position:
               chr5:68604643-68604849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-427
               

               Cow position:
               chr5:14415557-14415764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               169
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               98, 12
               

               Conread position:
               216-427
               

               Cow position:
               chr5:39936887-39937097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               62, 17
               

               Conread position:
               216-429
               

               Cow position:
               chr5:72007069-72006860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               62, 100
               

               Conread position:
               216-430
               

               Cow position:
               chr5:28330548-28330340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-430
               

               Cow position:
               chr5:33661638-33661850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               168
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               62, 152
               

               Conread position:
               216-430
               

               Cow position:
               chr5:61600196-61600412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               170
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               62, 210
               

               Conread position:
               216-430
               

               Cow position:
               chr5:69773355-69773561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               60, 76
               

               Conread position:
               216-431
               

               Cow position:
               chr5:18702429-18702215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               62, 171
               

               Conread position:
               216-431
               

               Cow position:
               chr5:22737889-22738104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               62, 49
               

               Conread position:
               216-431
               

               Cow position:
               chr5:24996440-24996228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               166
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               216-432
               

               Cow position:
               chr5:37714121-37713901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               56, 142
               

               Conread position:
               216-432
               

               Cow position:
               chr5:39442076-39442290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               9, 123
               

               Conread position:
               216-432
               

               Cow position:
               chr5:41229496-41229702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               140, 58
               

               Conread position:
               216-433
               

               Cow position:
               chr5:14832824-14832627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               62, 47
               

               Conread position:
               216-433
               

               Cow position:
               chr5:47343683-47343896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               62, 158
               

               Conread position:
               216-434
               

               Cow position:
               chr5:30332727-30332942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               25, 56
               

               Conread position:
               216-434
               

               Cow position:
               chr5:56028746-56028531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               173
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-435
               

               Cow position:
               chr5:3491985-3492194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 79
               

               Conread position:
               216-435
               

               Cow position:
               chr5:21524948-21525168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 207
               

               Conread position:
               216-435
               

               Cow position:
               chr5:56753511-56753725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               62, 13
               

               Conread position:
               216-436
               

               Cow position:
               chr5:18090511-18090724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-436
               

               Cow position:
               chr5:20410854-20410631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-436
               

               Cow position:
               chr5:29680862-29681080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               109, 77
               

               Conread position:
               216-436
               

               Cow position:
               chr5:39094337-39094555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               132, 75
               

               Conread position:
               216-436
               

               Cow position:
               chr5:43858644-43858434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               174
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               206, 55
               

               Conread position:
               216-437
               

               Cow position:
               chr5:10789894-10789677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               62, 146
               

               Conread position:
               216-437
               

               Cow position:
               chr5:61488327-61488106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-437
               

               Cow position:
               chr5:63992380-63992172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               13, 80
               

               Conread position:
               216-437
               

               Cow position:
               chr5:73252880-73253093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               170, 61
               

               Conread position:
               216-438
               

               Cow position:
               chr5:741165-740940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               15, 76
               

               Conread position:
               216-438
               

               Cow position:
               chr5:1276691-1276463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-438
               

               Cow position:
               chr5:4507177-4506951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-438
               

               Cow position:
               chr5:12351998-12351784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               205, 40
               

               Conread position:
               216-438
               

               Cow position:
               chr5:34922051-34921836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               62, 134
               

               Conread position:
               216-438
               

               Cow position:
               chr5:59326044-59325833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-438
               

               Cow position:
               chr5:72042007-72042222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               48, 29
               

               Conread position:
               216-439
               

               Cow position:
               chr5:1338119-1337897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               62, 200
               

               Conread position:
               216-439
               

               Cow position:
               chr5:3696747-3696969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               62, 200
               

               Conread position:
               216-439
               

               Cow position:
               chr5:24300065-24300289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               38, 32
               

               Conread position:
               216-439
               

               Cow position:
               chr5:40357086-40356861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 53
               

               Conread position:
               216-439
               

               Cow position:
               chr5:51936940-51937160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               199, 0
               

               Conread position:
               216-440
               

               Cow position:
               chr5:18287450-18287674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               62, 158
               

               Conread position:
               216-440
               

               Cow position:
               chr5:19278908-19278697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               216-440
               

               Cow position:
               chr5:25231230-25231007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               11, 135
               

               Conread position:
               216-440
               

               Cow position:
               chr5:25495554-25495345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               172, 60
               

               Conread position:
               216-440
               

               Cow position:
               chr5:34288686-34288468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               49, 63
               

               Conread position:
               216-440
               

               Cow position:
               chr5:43437133-43436908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-440
               

               Cow position:
               chr5:45226040-45225820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 49
               

               Conread position:
               216-440
               

               Cow position:
               chr5:51076861-51076643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               17, 77
               

               Conread position:
               216-440
               

               Cow position:
               chr5:55942614-55942393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               62, 89
               

               Conread position:
               216-440
               

               Cow position:
               chr5:58770066-58769841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-440
               

               Cow position:
               chr5:61030445-61030222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               62, 136
               

               Conread position:
               216-440
               

               Cow position:
               chr5:69516923-69516699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               62, 189
               

               Conread position:
               216-441
               

               Cow position:
               chr5:1344075-1343849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               62, 168
               

               Conread position:
               216-441
               

               Cow position:
               chr5:31469799-31469577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               177
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               62, 27
               

               Conread position:
               216-441
               

               Cow position:
               chr5:37425527-37425745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               62, 13
               

               Conread position:
               216-441
               

               Cow position:
               chr5:63236074-63235848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               62, 213
               

               Conread position:
               216-445
               

               Cow position:
               chr5:53835498-53835720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 75
               

               Conread position:
               216-448
               

               Cow position:
               chr5:28324129-28324372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 134
               

               Conread position:
               216-449
               

               Cow position:
               chr5:5715053-5714823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               34, 28
               

               Conread position:
               216-451
               

               Cow position:
               chr5:16085016-16084779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-451
               

               Cow position:
               chr5:32975767-32975537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-451
               

               Cow position:
               chr5:62173457-62173689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-451
               

               Cow position:
               chr5:63566090-63566327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               216-453
               

               Cow position:
               chr5:17087246-17087002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               7, 130
               

               Conread position:
               216-453
               

               Cow position:
               chr5:38831210-38830977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               62, 79
               

               Conread position:
               216-453
               

               Cow position:
               chr5:42747942-42748176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               62, 15
               

               Conread position:
               216-454
               

               Cow position:
               chr5:39299312-39299549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-454
               

               Cow position:
               chr5:58144821-58144582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 87
               

               Conread position:
               216-455
               

               Cow position:
               chr5:17999712-17999472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               7, 98
               

               Conread position:
               216-455
               

               Cow position:
               chr5:38683140-38683379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-455
               

               Cow position:
               chr5:40109285-40109513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               206, 63
               

               Conread position:
               216-455
               

               Cow position:
               chr5:42677018-42677253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               62, 100
               

               Conread position:
               216-456
               

               Cow position:
               chr5:18104367-18104125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               13, 211
               

               Conread position:
               216-457
               

               Cow position:
               chr5:72150034-72150272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 63
               

               Conread position:
               216-458
               

               Cow position:
               chr5:59144-58909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-458
               

               Cow position:
               chr5:1766561-1766326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               191
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               13, 77
               

               Conread position:
               216-458
               

               Cow position:
               chr5:16025677-16025437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 129
               

               Conread position:
               216-458
               

               Cow position:
               chr5:21944165-21944421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-458
               

               Cow position:
               chr5:34442008-34441765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               60, 77
               

               Conread position:
               216-458
               

               Cow position:
               chr5:36868529-36868760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               63, 76
               

               Conread position:
               216-458
               

               Cow position:
               chr5:37942009-37941770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               62, 85
               

               Conread position:
               216-458
               

               Cow position:
               chr5:41303307-41303063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               62, 112
               

               Conread position:
               216-458
               

               Cow position:
               chr5:55989525-55989768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               60, 77
               

               Conread position:
               216-459
               

               Cow position:
               chr5:3281615-3281859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               189
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               53, 49
               

               Conread position:
               216-459
               

               Cow position:
               chr5:4551916-4552169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-459
               

               Cow position:
               chr5:5938108-5938346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-459
               

               Cow position:
               chr5:9859934-9859687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               62, 6
               

               Conread position:
               216-459
               

               Cow position:
               chr5:12149330-12149570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-459
               

               Cow position:
               chr5:14153926-14154176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               8, 130
               

               Conread position:
               216-459
               

               Cow position:
               chr5:14550802-14550560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 221
               

               Conread position:
               216-459
               

               Cow position:
               chr5:20127838-20128076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 44
               

               Conread position:
               216-459
               

               Cow position:
               chr5:20554965-20554730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               62, 17
               

               Conread position:
               216-459
               

               Cow position:
               chr5:23140789-23140557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-459
               

               Cow position:
               chr5:23856378-23856135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               132, 61
               

               Conread position:
               216-459
               

               Cow position:
               chr5:26097081-26097317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               62, 11
               

               Conread position:
               216-459
               

               Cow position:
               chr5:28926401-28926156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 21
               

               Conread position:
               216-459
               

               Cow position:
               chr5:29353345-29353101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-459
               

               Cow position:
               chr5:30253529-30253765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-459
               

               Cow position:
               chr5:31097021-31096779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               14, 142
               

               Conread position:
               216-459
               

               Cow position:
               chr5:32153532-32153295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               61, 100
               

               Conread position:
               216-459
               

               Cow position:
               chr5:34049893-34050142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               62, 92
               

               Conread position:
               216-459
               

               Cow position:
               chr5:35209688-35209451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               62, 16
               

               Conread position:
               216-459
               

               Cow position:
               chr5:37645857-37646099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 99
               

               Conread position:
               216-459
               

               Cow position:
               chr5:42777548-42777789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               63, 100
               

               Conread position:
               216-459
               

               Cow position:
               chr5:44583334-44583108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               193
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-459
               

               Cow position:
               chr5:47704351-47704102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               24, 227
               

               Conread position:
               216-459
               

               Cow position:
               chr5:47888931-47888687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 190
               

               Conread position:
               216-459
               

               Cow position:
               chr5:48224792-48224558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               77, 62
               

               Conread position:
               216-459
               

               Cow position:
               chr5:48757728-48757964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               212, 58
               

               Conread position:
               216-459
               

               Cow position:
               chr5:50950337-50950578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               187
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               62, 70
               

               Conread position:
               216-459
               

               Cow position:
               chr5:51151578-51151336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-459
               

               Cow position:
               chr5:52165398-52165153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-459
               

               Cow position:
               chr5:53855488-53855724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               130, 24
               

               Conread position:
               216-459
               

               Cow position:
               chr5:54064563-54064800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               62, 67
               

               Conread position:
               216-459
               

               Cow position:
               chr5:55145579-55145344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               62, 135
               

               Conread position:
               216-459
               

               Cow position:
               chr5:59443467-59443224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 21
               

               Conread position:
               216-459
               

               Cow position:
               chr5:61839972-61840212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               194
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               62, 21
               

               Conread position:
               216-459
               

               Cow position:
               chr5:62107711-62107468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               63, 138
               

               Conread position:
               216-459
               

               Cow position:
               chr5:63103695-63103938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               62, 203
               

               Conread position:
               216-459
               

               Cow position:
               chr5:63840362-63840124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               63, 106
               

               Conread position:
               216-459
               

               Cow position:
               chr5:64137035-64137280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               188
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               62, 78
               

               Conread position:
               216-459
               

               Cow position:
               chr5:64524096-64523839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               63, 35
               

               Conread position:
               216-459
               

               Cow position:
               chr5:65924915-65924665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               55, 62
               

               Conread position:
               216-459
               

               Cow position:
               chr5:66831930-66831686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               62, 39
               

               Conread position:
               216-459
               

               Cow position:
               chr5:73079996-73080227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               196, 44
               

               Conread position:
               216-460
               

               Cow position:
               chr5:9894343-9894097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               11, 55
               

               Conread position:
               216-460
               

               Cow position:
               chr5:28247960-28248198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               62, 89
               

               Conread position:
               216-461
               

               Cow position:
               chr5:60715571-60715337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               55, 76
               

               Conread position:
               216-462
               

               Cow position:
               chr5:21617239-21617485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               60, 81
               

               Conread position:
               216-462
               

               Cow position:
               chr5:27015475-27015707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               62, 21
               

               Conread position:
               216-462
               

               Cow position:
               chr5:34638669-34638911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               189
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               64, 76
               

               Conread position:
               216-462
               

               Cow position:
               chr5:50821572-50821810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               224, 57
               

               Conread position:
               216-462
               

               Cow position:
               chr5:72172807-72173055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               62, 142
               

               Conread position:
               216-463
               

               Cow position:
               chr5:65752640-65752888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-464
               

               Cow position:
               chr5:2288775-2288520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               62, 13
               

               Conread position:
               216-464
               

               Cow position:
               chr5:4218661-4218896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 79
               

               Conread position:
               216-464
               

               Cow position:
               chr5:4797527-4797294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               62, 79
               

               Conread position:
               216-464
               

               Cow position:
               chr5:5111293-5111045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 114
               

               Conread position:
               216-464
               

               Cow position:
               chr5:6086778-6086531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               184
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               62, 129
               

               Conread position:
               216-464
               

               Cow position:
               chr5:7723456-7723694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               27, 12
               

               Conread position:
               216-464
               

               Cow position:
               chr5:12709670-12709918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 12
               

               Conread position:
               216-464
               

               Cow position:
               chr5:16184873-16185117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 77
               

               Conread position:
               216-464
               

               Cow position:
               chr5:19470399-19470161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               216-464
               

               Cow position:
               chr5:19813428-19813191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               22, 29
               

               Conread position:
               216-464
               

               Cow position:
               chr5:22243001-22242743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 25
               

               Conread position:
               216-464
               

               Cow position:
               chr5:27403460-27403200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-464
               

               Cow position:
               chr5:29903738-29903494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               62, 44
               

               Conread position:
               216-464
               

               Cow position:
               chr5:31640211-31640454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               194
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               64, 129
               

               Conread position:
               216-464
               

               Cow position:
               chr5:35763074-35763300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               216-464
               

               Cow position:
               chr5:35826374-35826631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               62, 144
               

               Conread position:
               216-464
               

               Cow position:
               chr5:43923365-43923123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               198
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               62, 6
               

               Conread position:
               216-464
               

               Cow position:
               chr5:44848233-44847995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               62, 69
               

               Conread position:
               216-464
               

               Cow position:
               chr5:46104152-46103919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               60, 76
               

               Conread position:
               216-464
               

               Cow position:
               chr5:46122565-46122324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               207, 11
               

               Conread position:
               216-464
               

               Cow position:
               chr5:50533600-50533355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               194
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               10, 63
               

               Conread position:
               216-464
               

               Cow position:
               chr5:51357720-51357472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               62, 129
               

               Conread position:
               216-464
               

               Cow position:
               chr5:53842075-53842310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               170, 22
               

               Conread position:
               216-464
               

               Cow position:
               chr5:54405111-54404860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 12
               

               Conread position:
               216-464
               

               Cow position:
               chr5:55068500-55068735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               12, 44
               

               Conread position:
               216-464
               

               Cow position:
               chr5:56135185-56134935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-464
               

               Cow position:
               chr5:57074551-57074302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 101
               

               Conread position:
               216-464
               

               Cow position:
               chr5:60126157-60126402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               62, 75
               

               Conread position:
               216-464
               

               Cow position:
               chr5:61725754-61725996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               65, 12
               

               Conread position:
               216-464
               

               Cow position:
               chr5:62826969-62826723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               192
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               62, 13
               

               Conread position:
               216-464
               

               Cow position:
               chr5:64139347-64139589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-464
               

               Cow position:
               chr5:64321532-64321783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               62, 130
               

               Conread position:
               216-464
               

               Cow position:
               chr5:66257426-66257668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               62, 37
               

               Conread position:
               216-464
               

               Cow position:
               chr5:66338868-66339108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               198, 17
               

               Conread position:
               216-464
               

               Cow position:
               chr5:67932677-67932437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               189
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               216, 12
               

               Conread position:
               216-464
               

               Cow position:
               chr5:72287127-72286886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               62, 17
               

               Conread position:
               216-464
               

               Cow position:
               chr5:72310498-72310732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-464
               

               Cow position:
               chr5:72564546-72564793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-465
               

               Cow position:
               chr5:26990177-26990426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               192
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               83, 99
               

               Conread position:
               216-465
               

               Cow position:
               chr5:42063987-42064235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               62, 6
               

               Conread position:
               216-466
               

               Cow position:
               chr5:40928189-40927947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               212, 28
               

               Conread position:
               216-467
               

               Cow position:
               chr5:43929950-43929703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               62, 81
               

               Conread position:
               216-475
               

               Cow position:
               chr5:36854996-36855245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-476
               

               Cow position:
               chr5:3004497-3004765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               47, 175
               

               Conread position:
               216-476
               

               Cow position:
               chr5:42667604-42667345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               130, 17
               

               Conread position:
               216-477
               

               Cow position:
               chr5:75244506-75244244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               62, 106
               

               Conread position:
               216-478
               

               Cow position:
               chr5:3058464-3058719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-478
               

               Cow position:
               chr5:47317184-47316930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 21
               

               Conread position:
               216-478
               

               Cow position:
               chr5:59298175-59297921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               62, 74
               

               Conread position:
               216-479
               

               Cow position:
               chr5:5257513-5257243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               62, 127
               

               Conread position:
               216-479
               

               Cow position:
               chr5:41523009-41522757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               62, 23
               

               Conread position:
               216-482
               

               Cow position:
               chr5:33414621-33414363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-482
               

               Cow position:
               chr5:65601244-65601502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-489
               

               Cow position:
               chr5:4032205-4031933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 58
               

               Conread position:
               216-491
               

               Cow position:
               chr5:15478897-15479184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-491
               

               Cow position:
               chr5:16938224-16937964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               126, 75
               

               Conread position:
               216-491
               

               Cow position:
               chr5:18573954-18574233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 78
               

               Conread position:
               216-491
               

               Cow position:
               chr5:21828648-21828926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 94
               

               Conread position:
               216-491
               

               Cow position:
               chr5:28946275-28946002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               62, 77
               

               Conread position:
               216-491
               

               Cow position:
               chr5:30844895-30845171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 13
               

               Conread position:
               216-491
               

               Cow position:
               chr5:34528345-34528609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 82
               

               Conread position:
               216-491
               

               Cow position:
               chr5:37064877-37065147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               62, 137
               

               Conread position:
               216-491
               

               Cow position:
               chr5:41164872-41165146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 102
               

               Conread position:
               216-491
               

               Cow position:
               chr5:49685497-49685213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 102
               

               Conread position:
               216-491
               

               Cow position:
               chr5:52645294-52645022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               209
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               10, 63
               

               Conread position:
               216-491
               

               Cow position:
               chr5:56820476-56820203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 44
               

               Conread position:
               216-491
               

               Cow position:
               chr5:57935330-57935050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 130
               

               Conread position:
               216-494
               

               Cow position:
               chr5:3771630-3771909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-497
               

               Cow position:
               chr5:9090239-9089959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 12
               

               Conread position:
               216-501
               

               Cow position:
               chr5:52000003-52000292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 12
               

               Conread position:
               216-502
               

               Cow position:
               chr5:26377883-26377603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 76
               

               Conread position:
               216-503
               

               Cow position:
               chr5:27615298-27615588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               25, 77
               

               Conread position:
               216-503
               

               Cow position:
               chr5:48144007-48143713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               58, 49
               

               Conread position:
               216-503
               

               Cow position:
               chr5:48573977-48573696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               56, 77
               

               Conread position:
               216-508
               

               Cow position:
               chr5:6528464-6528757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               226
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               62, 90
               

               Conread position:
               216-508
               

               Cow position:
               chr5:50722834-50723120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               62, 43
               

               Conread position:
               216-508
               

               Cow position:
               chr5:58793831-58793533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 107
               

               Conread position:
               216-508
               

               Cow position:
               chr5:63987663-63987372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 12
               

               Conread position:
               217-413
               

               Cow position:
               chr5:61656391-61656582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               62, 77
               

               Conread position:
               217-415
               

               Cow position:
               chr5:2332729-2332531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               61, 113
               

               Conread position:
               217-415
               

               Cow position:
               chr5:34506141-34505950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               61, 74
               

               Conread position:
               217-444
               

               Cow position:
               chr5:23641207-23640984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               142, 60
               

               Conread position:
               217-446
               

               Cow position:
               chr5:61543735-61543961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               66, 75
               

               Conread position:
               217-458
               

               Cow position:
               chr5:64392939-64393179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               61, 137
               

               Conread position:
               217-459
               

               Cow position:
               chr5:41410635-41410397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               62, 194
               

               Conread position:
               217-460
               

               Cow position:
               chr5:40152260-40152504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               61, 91
               

               Conread position:
               217-462
               

               Cow position:
               chr5:65593665-65593900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               63, 11
               

               Conread position:
               217-464
               

               Cow position:
               chr5:46510083-46509836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               193
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               12, 97
               

               Conread position:
               217-464
               

               Cow position:
               chr5:67243709-67243950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               6, 129
               

               Conread position:
               217-464
               

               Cow position:
               chr5:74858358-74858604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               61, 75
               

               Conread position:
               217-479
               

               Cow position:
               chr5:46323027-46322756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 97
               

               Conread position:
               217-491
               

               Cow position:
               chr5:44796933-44796675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               208
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               61, 12
               

               Conread position:
               218-353
               

               Cow position:
               chr5:63967860-63967728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               60, 43
               

               Conread position:
               218-354
               

               Cow position:
               chr5:37090989-37090852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               218-381
               

               Cow position:
               chr5:32087935-32087769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               218-393
               

               Cow position:
               chr5:50864151-50864327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               10, 78
               

               Conread position:
               218-424
               

               Cow position:
               chr5:27154808-27155012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               168
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               149, 59
               

               Conread position:
               218-429
               

               Cow position:
               chr5:60519952-60520155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               172
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               60, 69
               

               Conread position:
               218-432
               

               Cow position:
               chr5:4952542-4952756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               60, 100
               

               Conread position:
               218-433
               

               Cow position:
               chr5:65933142-65932930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 41
               

               Conread position:
               218-433
               

               Cow position:
               chr5:71454810-71454605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               8, 75
               

               Conread position:
               218-438
               

               Cow position:
               chr5:15426314-15426530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               172
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               60, 20
               

               Conread position:
               218-440
               

               Cow position:
               chr5:43329907-43329691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               60, 101
               

               Conread position:
               218-455
               

               Cow position:
               chr5:22102527-22102284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               60, 98
               

               Conread position:
               218-458
               

               Cow position:
               chr5:61576325-61576568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               60, 74
               

               Conread position:
               218-458
               

               Cow position:
               chr5:66815790-66815548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 97
               

               Conread position:
               218-459
               

               Cow position:
               chr5:13691790-13691543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               22, 169
               

               Conread position:
               218-459
               

               Cow position:
               chr5:27353450-27353212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               166, 65
               

               Conread position:
               218-459
               

               Cow position:
               chr5:45170148-45170383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               60, 102
               

               Conread position:
               218-464
               

               Cow position:
               chr5:1779476-1779255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               218-464
               

               Cow position:
               chr5:11229888-11229643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               60, 126
               

               Conread position:
               218-464
               

               Cow position:
               chr5:27419936-27419700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               15, 75
               

               Conread position:
               218-464
               

               Cow position:
               chr5:28302954-28302716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               60, 74
               

               Conread position:
               218-464
               

               Cow position:
               chr5:28927807-28927557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 133
               

               Conread position:
               218-464
               

               Cow position:
               chr5:29860105-29860380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               213
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               45, 10
               

               Conread position:
               218-464
               

               Cow position:
               chr5:32378655-32378875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               60, 29
               

               Conread position:
               218-464
               

               Cow position:
               chr5:32697027-32696793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 60
               

               Conread position:
               218-464
               

               Cow position:
               chr5:47313259-47313503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               131, 60
               

               Conread position:
               218-464
               

               Cow position:
               chr5:62172204-62172441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               60, 74
               

               Conread position:
               218-472
               

               Cow position:
               chr5:65776600-65776348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 136
               

               Conread position:
               218-476
               

               Cow position:
               chr5:35235923-35235667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 93
               

               Conread position:
               218-479
               

               Cow position:
               chr5:7140319-7140061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 87
               

               Conread position:
               218-491
               

               Cow position:
               chr5:11668392-11668127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               210
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               60, 10
               

               Conread position:
               218-491
               

               Cow position:
               chr5:29827839-29828105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 74
               

               Conread position:
               218-491
               

               Cow position:
               chr5:56523960-56524232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               210
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               60, 10
               

               Conread position:
               218-504
               

               Cow position:
               chr5:3627382-3627079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               56, 177
               

               Conread position:
               219-381
               

               Cow position:
               chr5:40097571-40097406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               59, 38
               

               Conread position:
               219-392
               

               Cow position:
               chr5:24642935-24642770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               61, 89
               

               Conread position:
               219-430
               

               Cow position:
               chr5:31434052-31434255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               59, 73
               

               Conread position:
               219-430
               

               Cow position:
               chr5:45705834-45706039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               59, 73
               

               Conread position:
               219-430
               

               Cow position:
               chr5:71158477-71158267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               59, 107
               

               Conread position:
               219-458
               

               Cow position:
               chr5:6504093-6503858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               59, 72
               

               Conread position:
               219-459
               

               Cow position:
               chr5:28456625-28456383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               26, 142
               

               Conread position:
               219-459
               

               Cow position:
               chr5:28459927-28459684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               26, 143
               

               Conread position:
               219-464
               

               Cow position:
               chr5:45803847-45804089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               59, 64
               

               Conread position:
               219-464
               

               Cow position:
               chr5:54311120-54311365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 35
               

               Conread position:
               219-464
               

               Cow position:
               chr5:55967096-55966851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 126
               

               Conread position:
               219-503
               

               Cow position:
               chr5:3649677-3649386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               12, 135
               

               Conread position:
               219-508
               

               Cow position:
               chr5:3204622-3204904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               59, 46
               

               Conread position:
               220-414
               

               Cow position:
               chr5:48154685-48154494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               124, 53
               

               Conread position:
               220-427
               

               Cow position:
               chr5:57271478-57271274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               172
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               5, 74
               

               Conread position:
               220-429
               

               Cow position:
               chr5:41129553-41129745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               56, 77
               

               Conread position:
               220-436
               

               Cow position:
               chr5:57706703-57706922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               220-439
               

               Cow position:
               chr5:55430422-55430643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               220-448
               

               Cow position:
               chr5:40388078-40387859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               208, 53
               

               Conread position:
               220-458
               

               Cow position:
               chr5:3242686-3242454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               58, 74
               

               Conread position:
               220-459
               

               Cow position:
               chr5:57327576-57327817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               186
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               10, 207
               

               Conread position:
               220-480
               

               Cow position:
               chr5:68265176-68264915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               58, 152
               

               Conread position:
               221-438
               

               Cow position:
               chr5:68481012-68481239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               50, 69
               

               Conread position:
               221-448
               

               Cow position:
               chr5:47547928-47547706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 26
               

               Conread position:
               221-458
               

               Cow position:
               chr5:33080999-33080769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               57, 16
               

               Conread position:
               221-464
               

               Cow position:
               chr5:38832909-38833152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               57, 12
               

               Conread position:
               222-404
               

               Cow position:
               chr5:14512902-14513086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               56, 28
               

               Conread position:
               222-404
               

               Cow position:
               chr5:69099319-69099500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               56, 11
               

               Conread position:
               222-433
               

               Cow position:
               chr5:34184009-34184227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               222-437
               

               Cow position:
               chr5:41469598-41469807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               49, 71
               

               Conread position:
               222-439
               

               Cow position:
               chr5:17631080-17630874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               56, 123
               

               Conread position:
               222-444
               

               Cow position:
               chr5:15882686-15882459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               58, 123
               

               Conread position:
               222-445
               

               Cow position:
               chr5:63185464-63185246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               63, 123
               

               Conread position:
               222-459
               

               Cow position:
               chr5:43395348-43395125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               56, 45
               

               Conread position:
               222-464
               

               Cow position:
               chr5:21964083-21964318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               129, 17
               

               Conread position:
               222-464
               

               Cow position:
               chr5:55756650-55756391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               199
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               222-464
               

               Cow position:
               chr5:71494606-71494850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 71
               

               Conread position:
               222-478
               

               Cow position:
               chr5:57736904-57737143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               199
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               56, 70
               

               Conread position:
               222-491
               

               Cow position:
               chr5:18898773-18899034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 84
               

               Conread position:
               222-491
               

               Cow position:
               chr5:26595315-26595045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               54, 91
               

               Conread position:
               222-491
               

               Cow position:
               chr5:31918444-31918701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               244, 55
               

               Conread position:
               222-491
               

               Cow position:
               chr5:47756558-47756830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               56, 155
               

               Conread position:
               222-493
               

               Cow position:
               chr5:40039981-40039710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 95
               

               Conread position:
               222-503
               

               Cow position:
               chr5:41604402-41604699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               56, 73
               

               Conread position:
               223-438
               

               Cow position:
               chr5:67655110-67655336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               129, 10
               

               Conread position:
               223-439
               

               Cow position:
               chr5:11427451-11427235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               173
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               56, 197
               

               Conread position:
               223-445
               

               Cow position:
               chr5:50900696-50900909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               223-456
               

               Cow position:
               chr5:62870244-62870021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               55, 15
               

               Conread position:
               223-457
               

               Cow position:
               chr5:694377-694597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               207, 55
               

               Conread position:
               223-459
               

               Cow position:
               chr5:10261448-10261209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               55, 161
               

               Conread position:
               223-464
               

               Cow position:
               chr5:4710352-4710122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               187
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               53, 39
               

               Conread position:
               223-464
               

               Cow position:
               chr5:16508886-16509129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 40
               

               Conread position:
               223-464
               

               Cow position:
               chr5:45036812-45037043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 69
               

               Conread position:
               223-479
               

               Cow position:
               chr5:29212739-29212989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               198
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               55, 67
               

               Conread position:
               223-516
               

               Cow position:
               chr5:55821158-55821455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               182
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               55, 10
               

               Conread position:
               224-379
               

               Cow position:
               chr5:29756129-29756282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               53, 126
               

               Conread position:
               224-433
               

               Cow position:
               chr5:26046125-26046332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               54, 68
               

               Conread position:
               224-438
               

               Cow position:
               chr5:8821220-8821013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               55, 121
               

               Conread position:
               224-450
               

               Cow position:
               chr5:41951293-41951078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               53, 68
               

               Conread position:
               224-462
               

               Cow position:
               chr5:6045079-6045321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 121
               

               Conread position:
               224-464
               

               Cow position:
               chr5:4280255-4280475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               54, 68
               

               Conread position:
               224-464
               

               Cow position:
               chr5:50975677-50975931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               198
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               54, 124
               

               Conread position:
               224-491
               

               Cow position:
               chr5:458273-458547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 71
               

               Conread position:
               224-491
               

               Cow position:
               chr5:64758972-64758709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               208, 53
               

               Conread position:
               225-335
               

               Cow position:
               chr5:60015712-60015823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               225-400
               

               Cow position:
               chr5:39675654-39675486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               55, 69
               

               Conread position:
               225-440
               

               Cow position:
               chr5:27007688-27007903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               53, 120
               

               Conread position:
               225-459
               

               Cow position:
               chr5:44049495-44049726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               124, 53
               

               Conread position:
               225-459
               

               Cow position:
               chr5:71504918-71505152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               53, 67
               

               Conread position:
               225-464
               

               Cow position:
               chr5:7044918-7044676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               185
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               13, 20
               

               Conread position:
               225-479
               

               Cow position:
               chr5:51053855-51053610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 67
               

               Conread position:
               226-428
               

               Cow position:
               chr5:72845979-72845787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               198, 52
               

               Conread position:
               226-439
               

               Cow position:
               chr5:39710630-39710844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               52, 123
               

               Conread position:
               226-460
               

               Cow position:
               chr5:59082402-59082169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               52, 158
               

               Conread position:
               226-464
               

               Cow position:
               chr5:26790658-26790426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               53, 71
               

               Conread position:
               227-459
               

               Cow position:
               chr5:8994771-8994541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 65
               

               Conread position:
               228-382
               

               Cow position:
               chr5:24837150-24837000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               50, 63
               

               Conread position:
               228-440
               

               Cow position:
               chr5:35449049-35449251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               50, 67
               

               Conread position:
               229-415
               

               Cow position:
               chr5:26370495-26370674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               49, 31
               

               Conread position:
               229-443
               

               Cow position:
               chr5:27492270-27492487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               51, 120
               

               Conread position:
               229-508
               

               Cow position:
               chr5:23169022-23168752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               207, 49
               

               Conread position:
               232-429
               

               Cow position:
               chr5:56518410-56518217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               46, 62
               

               Conread position:
               232-476
               

               Cow position:
               chr5:9390335-9390595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               46, 124
               

               Conread position:
               233-394
               

               Cow position:
               chr5:20407866-20407709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               46, 59
               

               Conread position:
               233-459
               

               Cow position:
               chr5:2500388-2500155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               45, 59
               

               Conread position:
               233-479
               

               Cow position:
               chr5:1027891-1027649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               185
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               240, 85
               

               Conread position:
               234-451
               

               Cow position:
               chr5:50943352-50943127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               44, 111
               

               Conread position:
               234-464
               

               Cow position:
               chr5:57575567-57575800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               44, 111
               

               Conread position:
               236-417
               

               Cow position:
               chr5:22565447-22565617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               107, 43
               

               Conread position:
               236-464
               

               Cow position:
               chr5:34561812-34562045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               42, 109
               

               Conread position:
               237-443
               

               Cow position:
               chr5:49558972-49559177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               41, 55
               

               Conread position:
               237-462
               

               Cow position:
               chr5:69731322-69731533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               187, 41
               

               Conread position:
               237-464
               

               Cow position:
               chr5:24485621-24485405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               41, 50
               

               Conread position:
               237-464
               

               Cow position:
               chr5:44447082-44446836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               41, 129
               

               Conread position:
               237-491
               

               Cow position:
               chr5:63647670-63647419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               244, 41
               

               Conread position:
               238-358
               

               Cow position:
               chr5:56137238-56137120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               40, 54
               

               Conread position:
               238-459
               

               Cow position:
               chr5:1678204-1678416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               7, 41
               

               Conread position:
               238-459
               

               Cow position:
               chr5:53146080-53145859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               41, 11
               

               Conread position:
               238-479
               

               Cow position:
               chr5:8163018-8162773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               40, 80
               

               Conread position:
               239-393
               

               Cow position:
               chr5:43457712-43457559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               39, 53
               

               Conread position:
               239-433
               

               Cow position:
               chr5:32282137-32282333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               39, 142
               

               Conread position:
               239-451
               

               Cow position:
               chr5:74019964-74019754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               40, 18
               

               Conread position:
               239-459
               

               Cow position:
               chr5:22643411-22643202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               39, 53
               

               Conread position:
               239-459
               

               Cow position:
               chr5:46499105-46499322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               39, 53
               

               Conread position:
               239-459
               

               Cow position:
               chr5:50215752-50215537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               39, 21
               

               Conread position:
               240-406
               

               Cow position:
               chr5:50870349-50870516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               241-457
               

               Cow position:
               chr5:44587485-44587262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               242-459
               

               Cow position:
               chr5:4322220-4322428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               36, 108
               

               Conread position:
               242-462
               

               Cow position:
               chr5:69461144-69461360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               35, 50
               

               Conread position:
               242-464
               

               Cow position:
               chr5:4220790-4221009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               36, 109
               

               Conread position:
               243-442
               

               Cow position:
               chr5:57591501-57591699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               35, 128
               

               Conread position:
               243-456
               

               Cow position:
               chr5:48010036-48009829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               35, 54
               

               Conread position:
               243-464
               

               Cow position:
               chr5:20344967-20345191 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               180
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               35, 67
               

               Conread position:
               246-464
               

               Cow position:
               chr5:29061111-29060898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               32, 69
               

               Conread position:
               246-465
               

               Cow position:
               chr5:17644842-17644624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 56
               

               Conread position:
               247-459
               

               Cow position:
               chr5:52667841-52668054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               248-462
               

               Cow position:
               chr5:6670382-6670166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               30, 74
               

               Conread position:
               248-462
               

               Cow position:
               chr5:46512951-46512741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               30, 97
               

               Conread position:
               249-491
               

               Cow position:
               chr5:37808848-37808605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               29, 53
               

               Conread position:
               249-494
               

               Cow position:
               chr5:3639666-3639426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               11, 44
               

               Conread position:
               250-404
               

               Cow position:
               chr5:57576031-57576184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               250-479
               

               Cow position:
               chr5:55928760-55928989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               28, 42
               

               Conread position:
               250-491
               

               Cow position:
               chr5:47323268-47323520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               28, 77
               

               Conread position:
               251-436
               

               Cow position:
               chr5:71722879-71723067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               27, 174
               

               Conread position:
               251-444
               

               Cow position:
               chr5:39242371-39242190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               27, 41
               

               Conread position:
               251-444
               

               Cow position:
               chr5:66281230-66281415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 40
               

               Conread position:
               254-464
               

               Cow position:
               chr5:41713131-41713328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               180, 24
               

               Conread position:
               254-464
               

               Cow position:
               chr5:44028480-44028274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               24, 42
               

               Conread position:
               254-502
               

               Cow position:
               chr5:3668719-3668966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               255-459
               

               Cow position:
               chr5:28957794-28957590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               23, 142
               

               Conread position:
               255-464
               

               Cow position:
               chr5:6286604-6286404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               23, 48
               

               Conread position:
               255-493
               

               Cow position:
               chr5:41452844-41452607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               23, 66
               

               Conread position:
               256-439
               

               Cow position:
               chr5:34709616-34709798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               22, 160
               

               Conread position:
               256-446
               

               Cow position:
               chr5:35231363-35231555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               22, 65
               

               Conread position:
               256-446
               

               Cow position:
               chr5:38838234-38838043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               130
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               256-450
               

               Cow position:
               chr5:46732513-46732318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               256-451
               

               Cow position:
               chr5:51309791-51309987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               20, 133
               

               Conread position:
               256-459
               

               Cow position:
               chr5:42705088-42705285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               22, 38
               

               Conread position:
               256-491
               

               Cow position:
               chr5:51935006-51935248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               183
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               20, 183
               

               Conread position:
               259-404
               

               Cow position:
               chr5:45026091-45025950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               19, 32
               

               Conread position:
               259-439
               

               Cow position:
               chr5:43816784-43816607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               19, 6
               

               Conread position:
               259-456
               

               Cow position:
               chr5:19778757-19778557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               259-459
               

               Cow position:
               chr5:39333715-39333515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               259-464
               

               Cow position:
               chr5:45472092-45472311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 52
               

               Conread position:
               259-474
               

               Cow position:
               chr5:62638732-62638951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               19, 35
               

               Conread position:
               259-479
               

               Cow position:
               chr5:29980159-29979937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               19, 50
               

               Conread position:
               260-381
               

               Cow position:
               chr5:23913914-23914038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               260-413
               

               Cow position:
               chr5:60708322-60708476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               260-459
               

               Cow position:
               chr5:59115208-59115410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               163
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               18, 58
               

               Conread position:
               262-459
               

               Cow position:
               chr5:30178681-30178480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               16, 45
               

               Conread position:
               262-464
               

               Cow position:
               chr5:56014564-56014760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               18, 32
               

               Conread position:
               265-415
               

               Cow position:
               chr5:61875345-61875205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               13, 53
               

               Conread position:
               265-454
               

               Cow position:
               chr5:30092797-30092605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               14, 27
               

               Conread position:
               265-461
               

               Cow position:
               chr5:41010164-41009967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               13, 80
               

               Conread position:
               265-464
               

               Cow position:
               chr5:69520723-69520920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               13, 36
               

               Conread position:
               265-491
               

               Cow position:
               chr5:12866996-12866760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               265-491
               

               Cow position:
               chr5:30950087-30949857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 80
               

               Conread position:
               265-498
               

               Cow position:
               chr5:56317127-56317358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               13, 80
               

               Conread position:
               266-458
               

               Cow position:
               chr5:31223083-31222892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               12, 38
               

               Conread position:
               266-463
               

               Cow position:
               chr5:30629324-30629131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               13, 28
               

               Conread position:
               267-440
               

               Cow position:
               chr5:65967897-65967730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               11, 78
               

               Conread position:
               267-461
               

               Cow position:
               chr5:23529442-23529251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               9, 62
               

               Conread position:
               267-464
               

               Cow position:
               chr5:55955740-55955937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               163
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               11, 76
               

               Conread position:
               268-464
               

               Cow position:
               chr5:14629980-14629781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               10, 24
               

               Conread position:
               269-455
               

               Cow position:
               chr5:64060457-64060274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               9, 25
               

               Conread position:
               269-464
               

               Cow position:
               chr5:62985353-62985555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               9, 115
               

               Conread position:
               270-458
               

               Cow position:
               chr5:21920205-21920404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               272-460
               

               Cow position:
               chr5:42050388-42050578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               135, 72
               

               Conread position:
               272-464
               

               Cow position:
               chr5:45397418-45397602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               8, 20
               

               Conread position:
               276-478
               

               Cow position:
               chr5:35247266-35247068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               153, 18
               

               Conread position:
               277-450
               

               Cow position:
               chr5:55750406-55750239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               75, 24
               

               Conread position:
               277-451
               

               Cow position:
               chr5:44673529-44673702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               277-458
               

               Cow position:
               chr5:66972269-66972452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               152
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               112, 107
               

               Conread position:
               277-464
               

               Cow position:
               chr5:47696597-47696412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               148, 40
               

               Conread position:
               277-502
               

               Cow position:
               chr5:23866315-23866102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               189, 16
               

               Conread position:
               278-459
               

               Cow position:
               chr5:44849876-44849707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               279-439
               

               Cow position:
               chr5:59356834-59356995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               149, 0
               

               Conread position:
               279-444
               

               Cow position:
               chr5:37068739-37068899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               151, 65
               

               Conread position:
               279-464
               

               Cow position:
               chr5:71579021-71579205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               156, 15
               

               Conread position:
               280-436
               

               Cow position:
               chr5:58748611-58748768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               80, 90
               

               Conread position:
               281-455
               

               Cow position:
               chr5:35459445-35459274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               147, 34
               

               Conread position:
               281-459
               

               Cow position:
               chr5:39874972-39875148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               72, 8
               

               Conread position:
               282-459
               

               Cow position:
               chr5:12761270-12761094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               13, 52
               

               Conread position:
               284-457
               

               Cow position:
               chr5:36255411-36255235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               62, 87
               

               Conread position:
               284-459
               

               Cow position:
               chr5:59777846-59777670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               109, 84
               

               Conread position:
               284-464
               

               Cow position:
               chr5:63865644-63865827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               148, 60
               

               Conread position:
               285-437
               

               Cow position:
               chr5:19078968-19079119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               115, 30
               

               Conread position:
               285-459
               

               Cow position:
               chr5:54099360-54099532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               60, 49
               

               Conread position:
               286-450
               

               Cow position:
               chr5:31020283-31020125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               287-491
               

               Cow position:
               chr5:16214538-16214745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               10, 47
               

               Conread position:
               291-490
               

               Cow position:
               chr5:29097215-29097421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               53, 134
               

               Conread position:
               291-491
               

               Cow position:
               chr5:23678851-23678641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               294-477
               

               Cow position:
               chr5:30134107-30133924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               135, 106
               

               Conread position:
               296-393
               

               Cow position:
               chr5:54750697-54750794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               98
               

               Alignm identity:
               82
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               296-426
               

               Cow position:
               chr5:43844934-43844804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               116, 48
               

               Conread position:
               296-456
               

               Cow position:
               chr5:50972391-50972551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               48, 101
               

               Conread position:
               296-459
               

               Cow position:
               chr5:19335929-19335757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               296-459
               

               Cow position:
               chr5:66581824-66581985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               56, 125
               

               Conread position:
               296-464
               

               Cow position:
               chr5:65883915-65883743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               53, 123
               

               Conread position:
               296-489
               

               Cow position:
               chr5:48405313-48405119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               76, 23
               

               Conread position:
               297-459
               

               Cow position:
               chr5:14473551-14473380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               46, 17
               

               Conread position:
               298-445
               

               Cow position:
               chr5:19294623-19294480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               298-459
               

               Cow position:
               chr5:11540185-11540026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               298-459
               

               Cow position:
               chr5:25447427-25447585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               52, 19
               

               Conread position:
               298-459
               

               Cow position:
               chr5:51801107-51800948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               140, 23
               

               Conread position:
               298-459
               

               Cow position:
               chr5:63763323-63763490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               54, 129
               

               Conread position:
               298-464
               

               Cow position:
               chr5:7921537-7921375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               91, 52
               

               Conread position:
               298-489
               

               Cow position:
               chr5:45574484-45574671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               134, 19
               

               Conread position:
               299-431
               

               Cow position:
               chr5:73168134-73168006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               52, 17
               

               Conread position:
               299-459
               

               Cow position:
               chr5:36624097-36624254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               46, 80
               

               Conread position:
               299-464
               

               Cow position:
               chr5:67540339-67540172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               118, 45
               

               Conread position:
               300-464
               

               Cow position:
               chr5:56334543-56334716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               301-457
               

               Cow position:
               chr5:69047496-69047341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               143, 37
               

               Conread position:
               301-458
               

               Cow position:
               chr5:32673196-32673041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               14, 19
               

               Conread position:
               301-458
               

               Cow position:
               chr5:50684123-50684275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               123, 82
               

               Conread position:
               301-471
               

               Cow position:
               chr5:18288995-18289167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               301-508
               

               Cow position:
               chr5:991332-991538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               165, 43
               

               Conread position:
               303-460
               

               Cow position:
               chr5:41486873-41486712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               303-461
               

               Cow position:
               chr5:54768042-54767882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               303-491
               

               Cow position:
               chr5:45273633-45273443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               170, 0
               

               Conread position:
               303-503
               

               Cow position:
               chr5:29844147-29844355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               121, 47
               

               Conread position:
               304-459
               

               Cow position:
               chr5:63427137-63426981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               125, 25
               

               Conread position:
               305-451
               

               Cow position:
               chr5:45965300-45965154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               305-458
               

               Cow position:
               chr5:47721408-47721567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               305-491
               

               Cow position:
               chr5:7057537-7057343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               306-459
               

               Cow position:
               chr5:41227113-41226963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               307-441
               

               Cow position:
               chr5:58490589-58490722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               308-476
               

               Cow position:
               chr5:60747403-60747234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               114, 21
               

               Conread position:
               309-459
               

               Cow position:
               chr5:56680121-56680275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               317-459
               

               Cow position:
               chr5:58446685-58446831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               83, 33
               

               Conread position:
               319-476
               

               Cow position:
               chr5:16179641-16179481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               70, 58
               

               Conread position:
               322-458
               

               Cow position:
               chr5:76119437-76119577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               322-459
               

               Cow position:
               chr5:3002804-3002939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               322-459
               

               Cow position:
               chr5:33560847-33560710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               116, 100
               

               Conread position:
               322-459
               

               Cow position:
               chr5:34192786-34192930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               29, 9
               

               Conread position:
               322-464
               

               Cow position:
               chr5:49474658-49474516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               76, 28
               

               Conread position:
               322-464
               

               Cow position:
               chr5:57561404-57561552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               322-465
               

               Cow position:
               chr5:12901802-12901953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               322-479
               

               Cow position:
               chr5:13717684-13717524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               322-490
               

               Cow position:
               chr5:53710807-53710632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               29, 101
               

               Conread position:
               323-458
               

               Cow position:
               chr5:71846036-71845892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               323-459
               

               Cow position:
               chr5:19523785-19523924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               26, 98
               

               Conread position:
               325-479
               

               Cow position:
               chr5:60448105-60448261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               326-479
               

               Cow position:
               chr5:35125945-35126100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               112, 9
               

               Conread position:
               328-459
               

               Cow position:
               chr5:56635793-56635919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               328-491
               

               Cow position:
               chr5:57768090-57767927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               50, 103
               

               Conread position:
               329-451
               

               Cow position:
               chr5:41293974-41294098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               329-481
               

               Cow position:
               chr5:64168346-64168189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               20, 96
               

               Conread position:
               330-464
               

               Cow position:
               chr5:56469931-56469793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               330-491
               

               Cow position:
               chr5:53946790-53946955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               61, 20
               

               Conread position:
               331-464
               

               Cow position:
               chr5:12557396-12557260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               97, 19
               

               Conread position:
               334-459
               

               Cow position:
               chr5:36650448-36650574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               336-496
               

               Cow position:
               chr5:55019194-55019351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               17, 65
               

               Conread position:
               338-464
               

               Cow position:
               chr5:23357238-23357362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               51, 14
               

               Conread position:
               343-459
               

               Cow position:
               chr5:59257800-59257915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               343-491
               

               Cow position:
               chr5:50575692-50575842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               343-508
               

               Cow position:
               chr5:63234922-63234755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               21, 136
               

               Conread position:
               346-459
               

               Cow position:
               chr5:30805077-30805189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 64
               

               Conread position:
               346-465
               

               Cow position:
               chr5:59873181-59873052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               346-477
               

               Cow position:
               chr5:23866766-23866640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               347-448
               

               Cow position:
               chr5:57527007-57526903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               353-478
               

               Cow position:
               chr5:29259468-29259340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               33, 121
               

               Conread position:
               366-508
               

               Cow position:
               chr5:67212286-67212435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               58, 139
               

               Conread position:
               367-513
               

               Cow position:
               chr5:55796033-55795887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               99, 12
               
Show alignments to all cow chromosomes.
Conread position:	118-491
Cow position:	chr5:1246960-1247324 (view UCSC Genome Browser custom track)
Alignm length:	385
Alignm identity:	266
Alignm E-value:	2e-39
Alignm gaps (pig, cow):	21, 103
Conread position:	148-464
Cow position:	chr5:8024473-8024164 (view UCSC Genome Browser custom track)
Alignm length:	321
Alignm identity:	245
Alignm E-value:	0
Alignm gaps (pig, cow):	131, 11
Conread position:	158-479
Cow position:	chr5:37646832-37646498 (view UCSC Genome Browser custom track)
Alignm length:	338
Alignm identity:	256
Alignm E-value:	0
Alignm gaps (pig, cow):	17, 179
Conread position:	161-362
Cow position:	chr5:27306044-27306246 (view UCSC Genome Browser custom track)
Alignm length:	208
Alignm identity:	159
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	35, 9
Conread position:	161-438
Cow position:	chr5:41636601-41636871 (view UCSC Genome Browser custom track)
Alignm length:	280
Alignm identity:	188
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	56, 68
Conread position:	166-375
Cow position:	chr5:57626537-57626745 (view UCSC Genome Browser custom track)
Alignm length:	214
Alignm identity:	155
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	36, 132
Conread position:	166-434
Cow position:	chr5:40595270-40595011 (view UCSC Genome Browser custom track)
Alignm length:	274
Alignm identity:	190
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	44, 33
Conread position:	166-435
Cow position:	chr5:32963897-32963633 (view UCSC Genome Browser custom track)
Alignm length:	275
Alignm identity:	212
Alignm E-value:	0
Alignm gaps (pig, cow):	44, 30
Conread position:	166-452
Cow position:	chr5:29560139-29560423 (view UCSC Genome Browser custom track)
Alignm length:	292
Alignm identity:	193
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	30, 66
Conread position:	166-491
Cow position:	chr5:54350633-54350303 (view UCSC Genome Browser custom track)
Alignm length:	342
Alignm identity:	250
Alignm E-value:	0
Alignm gaps (pig, cow):	30, 137
Conread position:	167-464
Cow position:	chr5:39447796-39447506 (view UCSC Genome Browser custom track)
Alignm length:	305
Alignm identity:	230
Alignm E-value:	0
Alignm gaps (pig, cow):	63, 8
Conread position:	170-432
Cow position:	chr5:29504849-29505105 (view UCSC Genome Browser custom track)
Alignm length:	266
Alignm identity:	190
Alignm E-value:	3e-34
Alignm gaps (pig, cow):	63, 13
Conread position:	174-431
Cow position:	chr5:19905541-19905273 (view UCSC Genome Browser custom track)
Alignm length:	271
Alignm identity:	189
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	15, 187
Conread position:	174-444
Cow position:	chr5:7740561-7740286 (view UCSC Genome Browser custom track)
Alignm length:	282
Alignm identity:	187
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	127, 32
Conread position:	174-464
Cow position:	chr5:34115402-34115682 (view UCSC Genome Browser custom track)
Alignm length:	297
Alignm identity:	229
Alignm E-value:	0
Alignm gaps (pig, cow):	36, 106
Conread position:	177-353
Cow position:	chr5:24933951-24934128 (view UCSC Genome Browser custom track)
Alignm length:	180
Alignm identity:	129
Alignm E-value:	8e-23
Alignm gaps (pig, cow):	40, 5
Conread position:	178-381
Cow position:	chr5:54875937-54875734 (view UCSC Genome Browser custom track)
Alignm length:	213
Alignm identity:	155
Alignm E-value:	3e-23
Alignm gaps (pig, cow):	24, 11
Conread position:	178-459
Cow position:	chr5:60952402-60952685 (view UCSC Genome Browser custom track)
Alignm length:	295
Alignm identity:	204
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	15, 34
Conread position:	178-496
Cow position:	chr5:16206402-16206093 (view UCSC Genome Browser custom track)
Alignm length:	329
Alignm identity:	241
Alignm E-value:	6.00036e-42
Alignm gaps (pig, cow):	12, 75
Conread position:	180-347
Cow position:	chr5:37668623-37668793 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	124
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	30, 115