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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8060J09.5
        

               
Conread position:
               
118-460
               

               
Cow position:
               
chr9:34762482-34762819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
47, 36
               

               
Conread position:
               
128-449
               

               
Cow position:
               
chr9:44408396-44408083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
39, 84
               

               
Conread position:
               
148-457
               

               
Cow position:
               
chr9:36410016-36410325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
125, 19
               

               
Conread position:
               
156-356
               

               
Cow position:
               
chr9:2977709-2977513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
122, 18
               

               
Conread position:
               
163-436
               

               
Cow position:
               
chr9:50295698-50295973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
59, 43
               

               
Conread position:
               
166-364
               

               
Cow position:
               
chr9:32306121-32306312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
51, 43
               

               
Conread position:
               
166-435
               

               
Cow position:
               
chr9:31777372-31777632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
168-440
               

               
Cow position:
               
chr9:14961267-14961001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
49, 34
               

               
Conread position:
               
170-459
               

               
Cow position:
               
chr9:15950839-15951126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
47, 8
               

               
Conread position:
               
173-464
               

               
Cow position:
               
chr9:4646014-4646299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 41
               

               
Conread position:
               
173-464
               

               
Cow position:
               
chr9:7363337-7363050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
174-436
               

               
Cow position:
               
chr9:18072804-18073058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
178-451
               

               
Cow position:
               
chr9:22802829-22802555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 15
               

               
Conread position:
               
178-459
               

               
Cow position:
               
chr9:1520414-1520706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 67
               

               
Conread position:
               
178-459
               

               
Cow position:
               
chr9:52484606-52484890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
12, 39
               

               
Conread position:
               
178-464
               

               
Cow position:
               
chr9:29006875-29006583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 122
               

               
Conread position:
               
178-479
               

               
Cow position:
               
chr9:31347268-31346959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
11, 56
               

               
Conread position:
               
180-378
               

               
Cow position:
               
chr9:17568442-17568254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
96, 8
               

               
Conread position:
               
180-464
               

               
Cow position:
               
chr9:31078775-31079056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
16, 56
               

               
Conread position:
               
180-491
               

               
Cow position:
               
chr9:16300264-16300572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
8, 23
               

               
Conread position:
               
181-367
               

               
Cow position:
               
chr9:34400347-34400158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
10, 167
               

               
Conread position:
               
184-464
               

               
Cow position:
               
chr9:13205270-13205546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
185-461
               

               
Cow position:
               
chr9:26391071-26390797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 118
               

               
Conread position:
               
201-418
               

               
Cow position:
               
chr9:30020268-30020041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 155
               

               
Conread position:
               
202-349
               

               
Cow position:
               
chr9:24243394-24243544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
202-440
               

               
Cow position:
               
chr9:32625281-32625059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
187, 35
               

               
Conread position:
               
202-465
               

               
Cow position:
               
chr9:24887483-24887231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
15, 32
               

               
Conread position:
               
206-464
               

               
Cow position:
               
chr9:18002667-18002928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 89
               

               
Conread position:
               
208-456
               

               
Cow position:
               
chr9:30749305-30749556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
9, 85
               

               
Conread position:
               
208-459
               

               
Cow position:
               
chr9:21030596-21030339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
208-462
               

               
Cow position:
               
chr9:21459877-21460126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
9, 86
               

               
Conread position:
               
208-479
               

               
Cow position:
               
chr9:7410062-7409776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 85
               

               
Conread position:
               
208-491
               

               
Cow position:
               
chr9:52407450-52407161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 111
               

               
Conread position:
               
209-343
               

               
Cow position:
               
chr9:36844110-36843982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
209-366
               

               
Cow position:
               
chr9:25969625-25969467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
8, 85
               

               
Conread position:
               
209-366
               

               
Cow position:
               
chr9:33067325-33067163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
209-413
               

               
Cow position:
               
chr9:54470887-54470681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
209-423
               

               
Cow position:
               
chr9:52001285-52001072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
69, 35
               

               
Conread position:
               
209-426
               

               
Cow position:
               
chr9:5319908-5319698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
8, 87
               

               
Conread position:
               
209-429
               

               
Cow position:
               
chr9:31077399-31077619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
8, 84
               

               
Conread position:
               
209-431
               

               
Cow position:
               
chr9:63784646-63784864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
8, 41
               

               
Conread position:
               
209-437
               

               
Cow position:
               
chr9:22755069-22754842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
69, 207
               

               
Conread position:
               
209-437
               

               
Cow position:
               
chr9:36623175-36623390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
69, 5
               

               
Conread position:
               
209-438
               

               
Cow position:
               
chr9:5141353-5141130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 67
               

               
Conread position:
               
209-439
               

               
Cow position:
               
chr9:3169242-3169466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
62, 84
               

               
Conread position:
               
209-439
               

               
Cow position:
               
chr9:25514907-25515136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
8, 208
               

               
Conread position:
               
209-439
               

               
Cow position:
               
chr9:59924820-59924594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
209-440
               

               
Cow position:
               
chr9:41416629-41416400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
209-444
               

               
Cow position:
               
chr9:1084577-1084814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
209-451
               

               
Cow position:
               
chr9:37528735-37528490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
8, 84
               

               
Conread position:
               
209-452
               

               
Cow position:
               
chr9:41782174-41781931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
8, 87
               

               
Conread position:
               
209-455
               

               
Cow position:
               
chr9:19542187-19541940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
69, 205
               

               
Conread position:
               
209-459
               

               
Cow position:
               
chr9:1951991-1952239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
209-459
               

               
Cow position:
               
chr9:20900852-20901091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
10, 21
               

               
Conread position:
               
209-459
               

               
Cow position:
               
chr9:20942333-20942579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
209-461
               

               
Cow position:
               
chr9:55074858-55075104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 19
               

               
Conread position:
               
209-464
               

               
Cow position:
               
chr9:1712209-1712450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
8, 24
               

               
Conread position:
               
209-464
               

               
Cow position:
               
chr9:5510003-5509750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 110
               

               
Conread position:
               
209-464
               

               
Cow position:
               
chr9:6089376-6089114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 79
               

               
Conread position:
               
209-464
               

               
Cow position:
               
chr9:20416233-20416484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 22
               

               
Conread position:
               
209-465
               

               
Cow position:
               
chr9:20738981-20738721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
8, 86
               

               
Conread position:
               
209-469
               

               
Cow position:
               
chr9:44467070-44467326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 143
               

               
Conread position:
               
210-393
               

               
Cow position:
               
chr9:53257783-53257962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
68, 84
               

               
Conread position:
               
210-406
               

               
Cow position:
               
chr9:3379393-3379207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
210-406
               

               
Cow position:
               
chr9:5161788-5161980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
19, 83
               

               
Conread position:
               
210-413
               

               
Cow position:
               
chr9:20318301-20318498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 81
               

               
Conread position:
               
210-421
               

               
Cow position:
               
chr9:9491070-9490862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 79
               

               
Conread position:
               
210-429
               

               
Cow position:
               
chr9:3575342-3575130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 113
               

               
Conread position:
               
210-430
               

               
Cow position:
               
chr9:44822025-44822246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
68, 86
               

               
Conread position:
               
210-431
               

               
Cow position:
               
chr9:5399996-5399787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
68, 82
               

               
Conread position:
               
210-438
               

               
Cow position:
               
chr9:51311951-51311720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
55, 68
               

               
Conread position:
               
210-439
               

               
Cow position:
               
chr9:37967392-37967164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 207
               

               
Conread position:
               
210-450
               

               
Cow position:
               
chr9:27781045-27780801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
26, 210
               

               
Conread position:
               
210-459
               

               
Cow position:
               
chr9:18252646-18252889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
68, 120
               

               
Conread position:
               
210-459
               

               
Cow position:
               
chr9:26057171-26057410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 51
               

               
Conread position:
               
210-459
               

               
Cow position:
               
chr9:51891773-51891522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 30
               

               
Conread position:
               
210-459
               

               
Cow position:
               
chr9:64559608-64559852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 84
               

               
Conread position:
               
210-462
               

               
Cow position:
               
chr9:5442270-5442017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
20, 50
               

               
Conread position:
               
210-463
               

               
Cow position:
               
chr9:23430865-23431120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
69, 135
               

               
Conread position:
               
210-464
               

               
Cow position:
               
chr9:1950196-1949947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 56
               

               
Conread position:
               
210-464
               

               
Cow position:
               
chr9:3220400-3220162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
141, 68
               

               
Conread position:
               
210-464
               

               
Cow position:
               
chr9:4861670-4861410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
12, 142
               

               
Conread position:
               
210-464
               

               
Cow position:
               
chr9:26278896-26279143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
68, 138
               

               
Conread position:
               
210-464
               

               
Cow position:
               
chr9:55796035-55795781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
28, 19
               

               
Conread position:
               
210-464
               

               
Cow position:
               
chr9:59386500-59386743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
68, 81
               

               
Conread position:
               
210-490
               

               
Cow position:
               
chr9:41789555-41789282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 42
               

               
Conread position:
               
210-491
               

               
Cow position:
               
chr9:5433912-5433629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 82
               

               
Conread position:
               
210-491
               

               
Cow position:
               
chr9:9723605-9723882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
210-491
               

               
Cow position:
               
chr9:18215633-18215913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
68, 18
               

               
Conread position:
               
210-503
               

               
Cow position:
               
chr9:18110589-18110886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
66, 18
               

               
Conread position:
               
210-510
               

               
Cow position:
               
chr9:64050278-64050582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 83
               

               
Conread position:
               
211-363
               

               
Cow position:
               
chr9:42956636-42956485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
67, 17
               

               
Conread position:
               
211-432
               

               
Cow position:
               
chr9:58204943-58204723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
15, 138
               

               
Conread position:
               
211-448
               

               
Cow position:
               
chr9:29649909-29649672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 205
               

               
Conread position:
               
211-491
               

               
Cow position:
               
chr9:48118426-48118693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
133, 67
               

               
Conread position:
               
211-526
               

               
Cow position:
               
chr9:32396223-32395906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
65, 133
               

               
Conread position:
               
212-430
               

               
Cow position:
               
chr9:10011076-10010861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
17, 67
               

               
Conread position:
               
212-451
               

               
Cow position:
               
chr9:24917419-24917179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
212-454
               

               
Cow position:
               
chr9:54997747-54997993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
212-464
               

               
Cow position:
               
chr9:38961161-38961409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 82
               

               
Conread position:
               
212-491
               

               
Cow position:
               
chr9:17410910-17411196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
66, 25
               

               
Conread position:
               
212-491
               

               
Cow position:
               
chr9:32676961-32676674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
213-440
               

               
Cow position:
               
chr9:2113729-2113954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 133
               

               
Conread position:
               
213-442
               

               
Cow position:
               
chr9:41995988-41995758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 171
               

               
Conread position:
               
213-452
               

               
Cow position:
               
chr9:8600610-8600364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
52, 64
               

               
Conread position:
               
213-454
               

               
Cow position:
               
chr9:51620709-51620472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
213-459
               

               
Cow position:
               
chr9:34468319-34468547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
213-464
               

               
Cow position:
               
chr9:3387965-3387715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 36
               

               
Conread position:
               
213-465
               

               
Cow position:
               
chr9:54716348-54716582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
65, 34
               

               
Conread position:
               
213-491
               

               
Cow position:
               
chr9:5327525-5327255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
213-493
               

               
Cow position:
               
chr9:24873123-24872828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
66, 153
               

               
Conread position:
               
213-501
               

               
Cow position:
               
chr9:56861292-56860992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
214-338
               

               
Cow position:
               
chr9:27345164-27345290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
214-345
               

               
Cow position:
               
chr9:50776743-50776875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
214-359
               

               
Cow position:
               
chr9:32787835-32787978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
214-381
               

               
Cow position:
               
chr9:9624755-9624921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
96, 61
               

               
Conread position:
               
214-382
               

               
Cow position:
               
chr9:47926179-47926021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 14
               

               
Conread position:
               
214-426
               

               
Cow position:
               
chr9:8612564-8612346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
22, 135
               

               
Conread position:
               
214-427
               

               
Cow position:
               
chr9:31587824-31588036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
64, 86
               

               
Conread position:
               
214-429
               

               
Cow position:
               
chr9:25964551-25964769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
214-430
               

               
Cow position:
               
chr9:5393323-5393109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 15
               

               
Conread position:
               
214-430
               

               
Cow position:
               
chr9:41412038-41412249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
8, 82
               

               
Conread position:
               
214-431
               

               
Cow position:
               
chr9:14796506-14796716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
130, 15
               

               
Conread position:
               
214-432
               

               
Cow position:
               
chr9:29808738-29808516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 81
               

               
Conread position:
               
214-438
               

               
Cow position:
               
chr9:54924899-54924673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
64, 131
               

               
Conread position:
               
214-440
               

               
Cow position:
               
chr9:3724789-3725010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
63, 14
               

               
Conread position:
               
214-440
               

               
Cow position:
               
chr9:27052060-27052287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
62, 156
               

               
Conread position:
               
214-440
               

               
Cow position:
               
chr9:47263947-47264163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
214-449
               

               
Cow position:
               
chr9:12184019-12183788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 18
               

               
Conread position:
               
214-450
               

               
Cow position:
               
chr9:2718185-2718420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
64, 172
               

               
Conread position:
               
214-451
               

               
Cow position:
               
chr9:26065146-26065378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
64, 80
               

               
Conread position:
               
214-456
               

               
Cow position:
               
chr9:59172105-59172348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
131, 63
               

               
Conread position:
               
214-458
               

               
Cow position:
               
chr9:44710094-44709857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
64, 14
               

               
Conread position:
               
214-458
               

               
Cow position:
               
chr9:55256277-55256520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
67, 19
               

               
Conread position:
               
214-459
               

               
Cow position:
               
chr9:22696489-22696253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 15
               

               
Conread position:
               
214-459
               

               
Cow position:
               
chr9:48564368-48564115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
64, 184
               

               
Conread position:
               
214-462
               

               
Cow position:
               
chr9:38344168-38343915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 138
               

               
Conread position:
               
214-464
               

               
Cow position:
               
chr9:5532225-5531971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 14
               

               
Conread position:
               
214-464
               

               
Cow position:
               
chr9:22151815-22152060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 19
               

               
Conread position:
               
214-464
               

               
Cow position:
               
chr9:28726453-28726698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 35
               

               
Conread position:
               
214-464
               

               
Cow position:
               
chr9:28747249-28747494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
64, 78
               

               
Conread position:
               
214-464
               

               
Cow position:
               
chr9:28773390-28773147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
64, 78
               

               
Conread position:
               
214-464
               

               
Cow position:
               
chr9:29684418-29684168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
73, 15
               

               
Conread position:
               
214-464
               

               
Cow position:
               
chr9:50606680-50606922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
66, 78
               

               
Conread position:
               
214-464
               

               
Cow position:
               
chr9:63746077-63745836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
64, 78
               

               
Conread position:
               
214-466
               

               
Cow position:
               
chr9:15215408-15215663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 104
               

               
Conread position:
               
214-491
               

               
Cow position:
               
chr9:8534409-8534693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 82
               

               
Conread position:
               
214-491
               

               
Cow position:
               
chr9:28983454-28983179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
63, 79
               

               
Conread position:
               
214-508
               

               
Cow position:
               
chr9:9552360-9552071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 80
               

               
Conread position:
               
215-464
               

               
Cow position:
               
chr9:5501123-5500879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 77
               

               
Conread position:
               
215-491
               

               
Cow position:
               
chr9:17310289-17310568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
14, 106
               

               
Conread position:
               
216-345
               

               
Cow position:
               
chr9:3762628-3762495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
216-347
               

               
Cow position:
               
chr9:13993935-13993803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-347
               

               
Cow position:
               
chr9:36354011-36354135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-347
               

               
Cow position:
               
chr9:58451828-58451958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
216-348
               

               
Cow position:
               
chr9:62034903-62034774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
57, 76
               

               
Conread position:
               
216-356
               

               
Cow position:
               
chr9:54666176-54666037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
62, 68
               

               
Conread position:
               
216-359
               

               
Cow position:
               
chr9:34355656-34355798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
216-367
               

               
Cow position:
               
chr9:49544790-49544935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
62, 43
               

               
Conread position:
               
216-370
               

               
Cow position:
               
chr9:8418105-8418261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
62, 39
               

               
Conread position:
               
216-370
               

               
Cow position:
               
chr9:29338761-29338917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
13, 131
               

               
Conread position:
               
216-370
               

               
Cow position:
               
chr9:58131453-58131607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 129
               

               
Conread position:
               
216-373
               

               
Cow position:
               
chr9:20237737-20237892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 13
               

               
Conread position:
               
216-374
               

               
Cow position:
               
chr9:4962497-4962343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
216-375
               

               
Cow position:
               
chr9:51928974-51928813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 21
               

               
Conread position:
               
216-379
               

               
Cow position:
               
chr9:18008596-18008752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-386
               

               
Cow position:
               
chr9:18140024-18140192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
62, 43
               

               
Conread position:
               
216-396
               

               
Cow position:
               
chr9:1350175-1350352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 21
               

               
Conread position:
               
216-397
               

               
Cow position:
               
chr9:35101138-35100961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
60, 76
               

               
Conread position:
               
216-399
               

               
Cow position:
               
chr9:58647313-58647134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
19, 98
               

               
Conread position:
               
216-403
               

               
Cow position:
               
chr9:35369151-35368965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
55, 106
               

               
Conread position:
               
216-405
               

               
Cow position:
               
chr9:2398361-2398540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-406
               

               
Cow position:
               
chr9:26310829-26310635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
62, 129
               

               
Conread position:
               
216-408
               

               
Cow position:
               
chr9:38184207-38184402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-410
               

               
Cow position:
               
chr9:10877595-10877791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 96
               

               
Conread position:
               
216-410
               

               
Cow position:
               
chr9:17785190-17785381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
62, 100
               

               
Conread position:
               
216-411
               

               
Cow position:
               
chr9:29776326-29776522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-415
               

               
Cow position:
               
chr9:3594254-3594455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
15, 142
               

               
Conread position:
               
216-418
               

               
Cow position:
               
chr9:14974655-14974858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
62, 116
               

               
Conread position:
               
216-419
               

               
Cow position:
               
chr9:38385598-38385797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 130
               

               
Conread position:
               
216-420
               

               
Cow position:
               
chr9:21840346-21840148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
61, 79
               

               
Conread position:
               
216-422
               

               
Cow position:
               
chr9:1855550-1855335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-424
               

               
Cow position:
               
chr9:6192188-6192396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
62, 136
               

               
Conread position:
               
216-424
               

               
Cow position:
               
chr9:26577589-26577788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-426
               

               
Cow position:
               
chr9:33100871-33101072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
216-427
               

               
Cow position:
               
chr9:20393857-20394056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
131, 61
               

               
Conread position:
               
216-427
               

               
Cow position:
               
chr9:37069298-37069507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-429
               

               
Cow position:
               
chr9:34957781-34957991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
216-429
               

               
Cow position:
               
chr9:36490624-36490830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
216-429
               

               
Cow position:
               
chr9:58674012-58673801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
86, 104
               

               
Conread position:
               
216-430
               

               
Cow position:
               
chr9:15982807-15983021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
216-430
               

               
Cow position:
               
chr9:24726407-24726615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-430
               

               
Cow position:
               
chr9:25933226-25933430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 83
               

               
Conread position:
               
216-430
               

               
Cow position:
               
chr9:29825300-29825097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-431
               

               
Cow position:
               
chr9:53412978-53413188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
56, 149
               

               
Conread position:
               
216-432
               

               
Cow position:
               
chr9:49982826-49983039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
62, 152
               

               
Conread position:
               
216-433
               

               
Cow position:
               
chr9:45170898-45171109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
62, 71
               

               
Conread position:
               
216-433
               

               
Cow position:
               
chr9:62357260-62357470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-435
               

               
Cow position:
               
chr9:4128512-4128728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
13, 79
               

               
Conread position:
               
216-435
               

               
Cow position:
               
chr9:19539368-19539147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
62, 207
               

               
Conread position:
               
216-435
               

               
Cow position:
               
chr9:52505032-52505253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
57, 208
               

               
Conread position:
               
216-436
               

               
Cow position:
               
chr9:9957091-9956881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
55, 73
               

               
Conread position:
               
216-436
               

               
Cow position:
               
chr9:44218032-44217818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-436
               

               
Cow position:
               
chr9:44914825-44915032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-436
               

               
Cow position:
               
chr9:47875677-47875899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
60, 13
               

               
Conread position:
               
216-437
               

               
Cow position:
               
chr9:5029786-5029565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
54, 76
               

               
Conread position:
               
216-438
               

               
Cow position:
               
chr9:11146384-11146602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 121
               

               
Conread position:
               
216-438
               

               
Cow position:
               
chr9:11870477-11870266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
185, 55
               

               
Conread position:
               
216-438
               

               
Cow position:
               
chr9:18342993-18342782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
62, 21
               

               
Conread position:
               
216-438
               

               
Cow position:
               
chr9:21674714-21674939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
20, 166
               

               
Conread position:
               
216-438
               

               
Cow position:
               
chr9:34310305-34310078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-438
               

               
Cow position:
               
chr9:54610960-54611182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 165
               

               
Conread position:
               
216-438
               

               
Cow position:
               
chr9:58853787-58853564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 77
               

               
Conread position:
               
216-438
               

               
Cow position:
               
chr9:61846879-61847097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
216-439
               

               
Cow position:
               
chr9:12284830-12284609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
67, 200
               

               
Conread position:
               
216-439
               

               
Cow position:
               
chr9:14853183-14853398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
216-439
               

               
Cow position:
               
chr9:19382593-19382381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
216-439
               

               
Cow position:
               
chr9:39152416-39152627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
216-439
               

               
Cow position:
               
chr9:40542385-40542171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
99, 62
               

               
Conread position:
               
216-439
               

               
Cow position:
               
chr9:48343872-48343653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
49, 12
               

               
Conread position:
               
216-439
               

               
Cow position:
               
chr9:53631257-53631478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
62, 24
               

               
Conread position:
               
216-439
               

               
Cow position:
               
chr9:63032730-63032952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 200
               

               
Conread position:
               
216-440
               

               
Cow position:
               
chr9:8951173-8950958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
108, 12
               

               
Conread position:
               
216-440
               

               
Cow position:
               
chr9:10082507-10082732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-440
               

               
Cow position:
               
chr9:17579586-17579363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 181
               

               
Conread position:
               
216-440
               

               
Cow position:
               
chr9:17634560-17634783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
62, 170
               

               
Conread position:
               
216-440
               

               
Cow position:
               
chr9:22656675-22656900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-440
               

               
Cow position:
               
chr9:26828550-26828769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
60, 129
               

               
Conread position:
               
216-440
               

               
Cow position:
               
chr9:45285260-45285475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-440
               

               
Cow position:
               
chr9:59013064-59013281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 70
               

               
Conread position:
               
216-440
               

               
Cow position:
               
chr9:62859946-62859722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
214, 62
               

               
Conread position:
               
216-441
               

               
Cow position:
               
chr9:5756732-5756943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 76
               

               
Conread position:
               
216-441
               

               
Cow position:
               
chr9:8997827-8997599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-441
               

               
Cow position:
               
chr9:16180110-16180337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-441
               

               
Cow position:
               
chr9:29024781-29024556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
67, 32
               

               
Conread position:
               
216-443
               

               
Cow position:
               
chr9:56253170-56252945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
222, 13
               

               
Conread position:
               
216-446
               

               
Cow position:
               
chr9:3192407-3192638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-447
               

               
Cow position:
               
chr9:16218372-16218606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 132
               

               
Conread position:
               
216-449
               

               
Cow position:
               
chr9:5621759-5621997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
62, 129
               

               
Conread position:
               
216-449
               

               
Cow position:
               
chr9:9823248-9823467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
216-449
               

               
Cow position:
               
chr9:31361296-31361063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 200
               

               
Conread position:
               
216-449
               

               
Cow position:
               
chr9:33846804-33847035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
62, 15
               

               
Conread position:
               
216-450
               

               
Cow position:
               
chr9:9016948-9017183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-450
               

               
Cow position:
               
chr9:29841158-29840925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
62, 82
               

               
Conread position:
               
216-450
               

               
Cow position:
               
chr9:30189369-30189138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
62, 15
               

               
Conread position:
               
216-451
               

               
Cow position:
               
chr9:1984251-1984485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
117, 17
               

               
Conread position:
               
216-451
               

               
Cow position:
               
chr9:5531873-5531638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-451
               

               
Cow position:
               
chr9:43023692-43023457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 24
               

               
Conread position:
               
216-451
               

               
Cow position:
               
chr9:55534341-55534578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
62, 98
               

               
Conread position:
               
216-454
               

               
Cow position:
               
chr9:42498100-42497857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 76
               

               
Conread position:
               
216-455
               

               
Cow position:
               
chr9:22114362-22114602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 95
               

               
Conread position:
               
216-456
               

               
Cow position:
               
chr9:13169400-13169629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
216-456
               

               
Cow position:
               
chr9:25958684-25958457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-456
               

               
Cow position:
               
chr9:36067176-36066939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-456
               

               
Cow position:
               
chr9:55287620-55287858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 139
               

               
Conread position:
               
216-456
               

               
Cow position:
               
chr9:56529677-56529436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-457
               

               
Cow position:
               
chr9:8548080-8547847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
129, 57
               

               
Conread position:
               
216-457
               

               
Cow position:
               
chr9:19504893-19504654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
216-457
               

               
Cow position:
               
chr9:30664508-30664747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-458
               

               
Cow position:
               
chr9:824226-823992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
62, 71
               

               
Conread position:
               
216-458
               

               
Cow position:
               
chr9:5246119-5245895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-458
               

               
Cow position:
               
chr9:5594771-5594535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-458
               

               
Cow position:
               
chr9:16086532-16086288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
14, 202
               

               
Conread position:
               
216-458
               

               
Cow position:
               
chr9:22443341-22443595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-458
               

               
Cow position:
               
chr9:35203155-35202909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr9:2065299-2065055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr9:3924887-3924665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr9:8338301-8338058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 136
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr9:9200454-9200693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 79
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr9:12428232-12428479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
30, 39
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr9:16745948-16745703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
62, 44
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr9:23368500-23368740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
62, 127
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr9:25546904-25546671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr9:25972770-25972533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
212, 62
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr9:32732414-32732660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr9:35533681-35533922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 12
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr9:37017155-37016922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr9:38692267-38692504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
60, 129
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr9:45756628-45756394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr9:47961528-47961772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr9:49404025-49403790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
8, 75
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr9:49764927-49764688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 86
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr9:53602684-53602458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr9:54437523-54437295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
205, 12
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr9:55084026-55084273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr9:58439511-58439751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr9:59795009-59795258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 47
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr9:60037926-60037681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
32, 12
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr9:62657063-62656835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
62, 71
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr9:63564366-63564610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-460
               

               
Cow position:
               
chr9:13994459-13994196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
62, 75
               

               
Conread position:
               
216-460
               

               
Cow position:
               
chr9:33218681-33218925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
216-462
               

               
Cow position:
               
chr9:4858805-4858563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
153, 59
               

               
Conread position:
               
216-462
               

               
Cow position:
               
chr9:5226894-5227145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-462
               

               
Cow position:
               
chr9:10666754-10666999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
67, 12
               

               
Conread position:
               
216-462
               

               
Cow position:
               
chr9:11299426-11299662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 32
               

               
Conread position:
               
216-462
               

               
Cow position:
               
chr9:58669650-58669403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-463
               

               
Cow position:
               
chr9:4928900-4928653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
62, 16
               

               
Conread position:
               
216-463
               

               
Cow position:
               
chr9:34689341-34689572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
209, 60
               

               
Conread position:
               
216-463
               

               
Cow position:
               
chr9:56773350-56773108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
62, 39
               

               
Conread position:
               
216-463
               

               
Cow position:
               
chr9:61739187-61738949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
208, 12
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr9:648046-647803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
62, 33
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr9:7634538-7634297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
62, 73
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr9:9405784-9406027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 65
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr9:9516500-9516739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr9:10092123-10092368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
62, 23
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr9:10144201-10144453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
62, 130
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr9:20681136-20681380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
62, 55
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr9:20848207-20847955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
62, 130
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr9:20989183-20989424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
62, 75
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr9:23028063-23027830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 11
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr9:24997245-24997493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 43
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr9:28354804-28354544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
49, 101
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr9:32812617-32812375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr9:36999790-37000035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr9:38793290-38793042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 138
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr9:41680005-41679773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr9:46316517-46316757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
62, 81
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr9:51566217-51566469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr9:52578262-52578512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
60, 129
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr9:54528786-54528538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 121
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr9:55118349-55118108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr9:56453604-56453362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
7, 130
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr9:57951058-57951295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
61, 76
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chr9:61997325-61997572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-465
               

               
Cow position:
               
chr9:64516826-64517074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-476
               

               
Cow position:
               
chr9:5268827-5268568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
62, 169
               

               
Conread position:
               
216-476
               

               
Cow position:
               
chr9:13221622-13221879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
38, 34
               

               
Conread position:
               
216-477
               

               
Cow position:
               
chr9:1751606-1751350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
216-479
               

               
Cow position:
               
chr9:9461384-9461647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
216-479
               

               
Cow position:
               
chr9:16538536-16538805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
62, 75
               

               
Conread position:
               
216-479
               

               
Cow position:
               
chr9:22361285-22361020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 20
               

               
Conread position:
               
216-479
               

               
Cow position:
               
chr9:29034769-29035026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
211, 12
               

               
Conread position:
               
216-479
               

               
Cow position:
               
chr9:29184863-29185127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-479
               

               
Cow position:
               
chr9:40105747-40105477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
63, 13
               

               
Conread position:
               
216-479
               

               
Cow position:
               
chr9:47472967-47472695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
62, 85
               

               
Conread position:
               
216-479
               

               
Cow position:
               
chr9:58133753-58134010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-483
               

               
Cow position:
               
chr9:13670908-13670640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 130
               

               
Conread position:
               
216-487
               

               
Cow position:
               
chr9:20406907-20406645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
216-489
               

               
Cow position:
               
chr9:8998626-8998348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 61
               

               
Conread position:
               
216-489
               

               
Cow position:
               
chr9:19714341-19714079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
216-490
               

               
Cow position:
               
chr9:8288889-8288613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 77
               

               
Conread position:
               
216-490
               

               
Cow position:
               
chr9:22318609-22318347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
62, 81
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chr9:8937419-8937149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
67, 156
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chr9:20961017-20961283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
131, 61
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chr9:31626420-31626146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 122
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chr9:33093215-33092949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
62, 42
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chr9:34697025-34697305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chr9:35167440-35167173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 63
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chr9:35850169-35849901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chr9:43871243-43870972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 63
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chr9:47869277-47869006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chr9:48106848-48107119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
29, 76
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chr9:60110504-60110247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
62, 72
               

               
Conread position:
               
216-493
               

               
Cow position:
               
chr9:5763359-5763638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 129
               

               
Conread position:
               
216-495
               

               
Cow position:
               
chr9:41513890-41513617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-496
               

               
Cow position:
               
chr9:50080775-50081048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
216-499
               

               
Cow position:
               
chr9:33940878-33940594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
216-501
               

               
Cow position:
               
chr9:3070152-3070430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-501
               

               
Cow position:
               
chr9:30138396-30138123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-503
               

               
Cow position:
               
chr9:10127399-10127688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
62, 15
               

               
Conread position:
               
216-503
               

               
Cow position:
               
chr9:23043046-23042758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
60, 53
               

               
Conread position:
               
216-503
               

               
Cow position:
               
chr9:41958524-41958806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
62, 129
               

               
Conread position:
               
216-508
               

               
Cow position:
               
chr9:9402914-9403192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
250, 60
               

               
Conread position:
               
216-508
               

               
Cow position:
               
chr9:34374659-34374943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
145, 6
               

               
Conread position:
               
216-508
               

               
Cow position:
               
chr9:36445892-36445601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-508
               

               
Cow position:
               
chr9:57896854-57897129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
217-367
               

               
Cow position:
               
chr9:24904747-24904601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
28, 60
               

               
Conread position:
               
217-430
               

               
Cow position:
               
chr9:53608124-53608334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
64, 31
               

               
Conread position:
               
217-438
               

               
Cow position:
               
chr9:8599873-8599655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
61, 75
               

               
Conread position:
               
217-440
               

               
Cow position:
               
chr9:64091958-64091735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
61, 128
               

               
Conread position:
               
217-449
               

               
Cow position:
               
chr9:12356126-12355894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
61, 75
               

               
Conread position:
               
217-456
               

               
Cow position:
               
chr9:39971303-39971081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
61, 41
               

               
Conread position:
               
217-457
               

               
Cow position:
               
chr9:16182221-16182454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
61, 11
               

               
Conread position:
               
217-459
               

               
Cow position:
               
chr9:18162885-18163128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
8, 27
               

               
Conread position:
               
217-459
               

               
Cow position:
               
chr9:50076335-50076092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
61, 11
               

               
Conread position:
               
217-459
               

               
Cow position:
               
chr9:52633225-52633465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
143, 15
               

               
Conread position:
               
217-460
               

               
Cow position:
               
chr9:18381130-18380891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
6, 79
               

               
Conread position:
               
217-460
               

               
Cow position:
               
chr9:47954955-47955195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
61, 27
               

               
Conread position:
               
217-461
               

               
Cow position:
               
chr9:22227815-22228051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 76
               

               
Conread position:
               
217-464
               

               
Cow position:
               
chr9:20091308-20091073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
61, 30
               

               
Conread position:
               
217-464
               

               
Cow position:
               
chr9:27697459-27697698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
217-464
               

               
Cow position:
               
chr9:50976976-50977219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
61, 75
               

               
Conread position:
               
217-480
               

               
Cow position:
               
chr9:6880040-6879780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 152
               

               
Conread position:
               
217-482
               

               
Cow position:
               
chr9:15805651-15805913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 145
               

               
Conread position:
               
217-488
               

               
Cow position:
               
chr9:26086337-26086056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 181
               

               
Conread position:
               
217-499
               

               
Cow position:
               
chr9:31226192-31226474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
61, 75
               

               
Conread position:
               
218-342
               

               
Cow position:
               
chr9:49689206-49689084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
218-353
               

               
Cow position:
               
chr9:48017554-48017686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
218-370
               

               
Cow position:
               
chr9:20465444-20465596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 127
               

               
Conread position:
               
218-393
               

               
Cow position:
               
chr9:31662738-31662561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
218-415
               

               
Cow position:
               
chr9:3807468-3807665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
60, 98
               

               
Conread position:
               
218-424
               

               
Cow position:
               
chr9:42585357-42585564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
60, 48
               

               
Conread position:
               
218-438
               

               
Cow position:
               
chr9:43814708-43814497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
60, 10
               

               
Conread position:
               
218-439
               

               
Cow position:
               
chr9:2034440-2034225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
14, 22
               

               
Conread position:
               
218-443
               

               
Cow position:
               
chr9:18093395-18093623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
148, 75
               

               
Conread position:
               
218-446
               

               
Cow position:
               
chr9:31640049-31640281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
218-446
               

               
Cow position:
               
chr9:33388639-33388856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
207, 60
               

               
Conread position:
               
218-450
               

               
Cow position:
               
chr9:42998202-42998431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 50
               

               
Conread position:
               
218-451
               

               
Cow position:
               
chr9:41653058-41652825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
61, 127
               

               
Conread position:
               
218-456
               

               
Cow position:
               
chr9:8868867-8869109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 165
               

               
Conread position:
               
218-464
               

               
Cow position:
               
chr9:1997401-1997163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
60, 39
               

               
Conread position:
               
218-464
               

               
Cow position:
               
chr9:5218911-5219144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
218-464
               

               
Cow position:
               
chr9:9416138-9416370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
218-464
               

               
Cow position:
               
chr9:27076982-27077216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
218-464
               

               
Cow position:
               
chr9:28948121-28947884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
58, 74
               

               
Conread position:
               
218-479
               

               
Cow position:
               
chr9:32371491-32371747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
35, 51
               

               
Conread position:
               
218-491
               

               
Cow position:
               
chr9:26404058-26403782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 219
               

               
Conread position:
               
218-491
               

               
Cow position:
               
chr9:42445716-42445986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
206, 13
               

               
Conread position:
               
218-494
               

               
Cow position:
               
chr9:10308738-10309005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
51, 79
               

               
Conread position:
               
219-423
               

               
Cow position:
               
chr9:20839882-20839684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 73
               

               
Conread position:
               
219-438
               

               
Cow position:
               
chr9:19637370-19637584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
57, 98
               

               
Conread position:
               
219-449
               

               
Cow position:
               
chr9:54681770-54681548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 73
               

               
Conread position:
               
219-458
               

               
Cow position:
               
chr9:6933804-6934042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 59
               

               
Conread position:
               
219-459
               

               
Cow position:
               
chr9:3932235-3931991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
46, 126
               

               
Conread position:
               
219-459
               

               
Cow position:
               
chr9:39681624-39681370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
61, 44
               

               
Conread position:
               
219-459
               

               
Cow position:
               
chr9:64155588-64155820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 126
               

               
Conread position:
               
219-460
               

               
Cow position:
               
chr9:22638368-22638132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
59, 72
               

               
Conread position:
               
219-464
               

               
Cow position:
               
chr9:34287062-34286825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
59, 54
               

               
Conread position:
               
219-479
               

               
Cow position:
               
chr9:33598249-33597996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 73
               

               
Conread position:
               
219-485
               

               
Cow position:
               
chr9:1614988-1614725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
59, 159
               

               
Conread position:
               
219-491
               

               
Cow position:
               
chr9:9753128-9753394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 18
               

               
Conread position:
               
219-491
               

               
Cow position:
               
chr9:21888437-21888167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 73
               

               
Conread position:
               
220-375
               

               
Cow position:
               
chr9:6952357-6952205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
28, 19
               

               
Conread position:
               
220-375
               

               
Cow position:
               
chr9:37510284-37510128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 36
               

               
Conread position:
               
220-404
               

               
Cow position:
               
chr9:17740676-17740861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
5, 126
               

               
Conread position:
               
220-407
               

               
Cow position:
               
chr9:37141494-37141315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
58, 19
               

               
Conread position:
               
220-428
               

               
Cow position:
               
chr9:8099555-8099759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 75
               

               
Conread position:
               
220-430
               

               
Cow position:
               
chr9:52689357-52689560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
58, 83
               

               
Conread position:
               
220-436
               

               
Cow position:
               
chr9:44108563-44108778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
206, 57
               

               
Conread position:
               
220-437
               

               
Cow position:
               
chr9:8546585-8546375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
58, 74
               

               
Conread position:
               
220-437
               

               
Cow position:
               
chr9:36602153-36602367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
58, 9
               

               
Conread position:
               
220-451
               

               
Cow position:
               
chr9:49206134-49206362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 17
               

               
Conread position:
               
220-459
               

               
Cow position:
               
chr9:11068202-11068440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
98, 57
               

               
Conread position:
               
220-459
               

               
Cow position:
               
chr9:35305853-35306087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
220-460
               

               
Cow position:
               
chr9:43207112-43207344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
129, 41
               

               
Conread position:
               
220-464
               

               
Cow position:
               
chr9:34918999-34919234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
58, 74
               

               
Conread position:
               
220-479
               

               
Cow position:
               
chr9:11192901-11193161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
58, 27
               

               
Conread position:
               
220-491
               

               
Cow position:
               
chr9:30402153-30402428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
97, 58
               

               
Conread position:
               
220-508
               

               
Cow position:
               
chr9:9595686-9595971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
13, 99
               

               
Conread position:
               
221-347
               

               
Cow position:
               
chr9:14298900-14298773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
221-451
               

               
Cow position:
               
chr9:52724950-52725175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
57, 134
               

               
Conread position:
               
221-454
               

               
Cow position:
               
chr9:35904485-35904709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 69
               

               
Conread position:
               
221-459
               

               
Cow position:
               
chr9:17929038-17928788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
57, 141
               

               
Conread position:
               
221-459
               

               
Cow position:
               
chr9:20321850-20322069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
26, 32
               

               
Conread position:
               
221-459
               

               
Cow position:
               
chr9:38193266-38193040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
57, 83
               

               
Conread position:
               
221-464
               

               
Cow position:
               
chr9:34000348-34000594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 72
               

               
Conread position:
               
221-464
               

               
Cow position:
               
chr9:44831789-44832029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
57, 70
               

               
Conread position:
               
221-465
               

               
Cow position:
               
chr9:23388412-23388654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
57, 70
               

               
Conread position:
               
221-477
               

               
Cow position:
               
chr9:64637811-64637560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
58, 86
               

               
Conread position:
               
222-356
               

               
Cow position:
               
chr9:51557097-51557231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
56, 123
               

               
Conread position:
               
222-356
               

               
Cow position:
               
chr9:54177984-54178118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
222-362
               

               
Cow position:
               
chr9:40060062-40060202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
49, 43
               

               
Conread position:
               
222-425
               

               
Cow position:
               
chr9:23541153-23541342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
57, 70
               

               
Conread position:
               
222-437
               

               
Cow position:
               
chr9:52787272-52787486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
58, 70
               

               
Conread position:
               
222-439
               

               
Cow position:
               
chr9:26555941-26556151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
222-441
               

               
Cow position:
               
chr9:10118400-10118616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
222-448
               

               
Cow position:
               
chr9:25502273-25502496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
58, 200
               

               
Conread position:
               
222-459
               

               
Cow position:
               
chr9:26434802-26435023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
222-459
               

               
Cow position:
               
chr9:63905339-63905576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
55, 201
               

               
Conread position:
               
222-476
               

               
Cow position:
               
chr9:8724062-8723806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
19, 103
               

               
Conread position:
               
222-491
               

               
Cow position:
               
chr9:5836427-5836151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
56, 88
               

               
Conread position:
               
222-491
               

               
Cow position:
               
chr9:6225187-6225458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 90
               

               
Conread position:
               
222-491
               

               
Cow position:
               
chr9:41283291-41283012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 43
               

               
Conread position:
               
222-491
               

               
Cow position:
               
chr9:55890075-55889808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
11, 71
               

               
Conread position:
               
222-495
               

               
Cow position:
               
chr9:49983427-49983697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
56, 100
               

               
Conread position:
               
223-438
               

               
Cow position:
               
chr9:3722603-3722821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
74, 15
               

               
Conread position:
               
223-459
               

               
Cow position:
               
chr9:29108801-29108567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
55, 42
               

               
Conread position:
               
223-462
               

               
Cow position:
               
chr9:34666673-34666448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
211, 45
               

               
Conread position:
               
223-464
               

               
Cow position:
               
chr9:9443333-9443578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 69
               

               
Conread position:
               
223-464
               

               
Cow position:
               
chr9:17871843-17872084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
55, 69
               

               
Conread position:
               
223-464
               

               
Cow position:
               
chr9:36827389-36827161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
55, 60
               

               
Conread position:
               
223-465
               

               
Cow position:
               
chr9:62442546-62442314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
56, 25
               

               
Conread position:
               
223-491
               

               
Cow position:
               
chr9:47906025-47906284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
205, 55
               

               
Conread position:
               
224-396
               

               
Cow position:
               
chr9:22616886-22616719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
54, 70
               

               
Conread position:
               
224-426
               

               
Cow position:
               
chr9:20318814-20319015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
54, 70
               

               
Conread position:
               
224-459
               

               
Cow position:
               
chr9:56032065-56032284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
224-464
               

               
Cow position:
               
chr9:9199521-9199754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 70
               

               
Conread position:
               
224-464
               

               
Cow position:
               
chr9:34901852-34902083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 53
               

               
Conread position:
               
225-437
               

               
Cow position:
               
chr9:8778974-8779183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
55, 51
               

               
Conread position:
               
225-438
               

               
Cow position:
               
chr9:20810799-20811009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
53, 120
               

               
Conread position:
               
225-453
               

               
Cow position:
               
chr9:2863694-2863466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 141
               

               
Conread position:
               
225-459
               

               
Cow position:
               
chr9:38846087-38846306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
53, 126
               

               
Conread position:
               
225-459
               

               
Cow position:
               
chr9:63194870-63194638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
53, 66
               

               
Conread position:
               
225-464
               

               
Cow position:
               
chr9:35375686-35375451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
53, 72
               

               
Conread position:
               
225-492
               

               
Cow position:
               
chr9:30162424-30162152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 51
               

               
Conread position:
               
226-435
               

               
Cow position:
               
chr9:64453859-64454065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
52, 104
               

               
Conread position:
               
226-450
               

               
Cow position:
               
chr9:44553008-44552785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 66
               

               
Conread position:
               
226-464
               

               
Cow position:
               
chr9:34742466-34742698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
14, 92
               

               
Conread position:
               
226-507
               

               
Cow position:
               
chr9:214201-214479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
45, 121
               

               
Conread position:
               
227-423
               

               
Cow position:
               
chr9:38875314-38875509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 73
               

               
Conread position:
               
227-479
               

               
Cow position:
               
chr9:39577994-39577742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
51, 65
               

               
Conread position:
               
229-394
               

               
Cow position:
               
chr9:51204983-51204817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
49, 117
               

               
Conread position:
               
229-459
               

               
Cow position:
               
chr9:32306978-32307202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 66
               

               
Conread position:
               
232-439
               

               
Cow position:
               
chr9:3782618-3782413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
46, 51
               

               
Conread position:
               
232-491
               

               
Cow position:
               
chr9:25922078-25921820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
48, 22
               

               
Conread position:
               
233-438
               

               
Cow position:
               
chr9:33681938-33681734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
128, 50
               

               
Conread position:
               
233-478
               

               
Cow position:
               
chr9:58979655-58979408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 118
               

               
Conread position:
               
234-461
               

               
Cow position:
               
chr9:62134367-62134600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
234-464
               

               
Cow position:
               
chr9:38614713-38614938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
114, 39
               

               
Conread position:
               
234-491
               

               
Cow position:
               
chr9:31814125-31814388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
44, 58
               

               
Conread position:
               
235-465
               

               
Cow position:
               
chr9:29092057-29091817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
10, 155
               

               
Conread position:
               
237-459
               

               
Cow position:
               
chr9:28735728-28735519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
41, 55
               

               
Conread position:
               
237-491
               

               
Cow position:
               
chr9:18216850-18217102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 115
               

               
Conread position:
               
238-464
               

               
Cow position:
               
chr9:33119633-33119862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
40, 107
               

               
Conread position:
               
239-457
               

               
Cow position:
               
chr9:61544897-61544684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
239-459
               

               
Cow position:
               
chr9:5209832-5209611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
41, 116
               

               
Conread position:
               
239-459
               

               
Cow position:
               
chr9:25657762-25657540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
39, 172
               

               
Conread position:
               
240-440
               

               
Cow position:
               
chr9:61493274-61493072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
39, 180
               

               
Conread position:
               
241-464
               

               
Cow position:
               
chr9:50139527-50139313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
37, 50
               

               
Conread position:
               
242-438
               

               
Cow position:
               
chr9:8563086-8562892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
36, 103
               

               
Conread position:
               
242-458
               

               
Cow position:
               
chr9:388770-388988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
36, 50
               

               
Conread position:
               
242-458
               

               
Cow position:
               
chr9:52131263-52131042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
107, 35
               

               
Conread position:
               
242-464
               

               
Cow position:
               
chr9:9573580-9573355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
242-464
               

               
Cow position:
               
chr9:34911405-34911185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
180, 36
               

               
Conread position:
               
242-491
               

               
Cow position:
               
chr9:35359857-35360107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
36, 140
               

               
Conread position:
               
243-381
               

               
Cow position:
               
chr9:33823342-33823208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
35, 49
               

               
Conread position:
               
243-429
               

               
Cow position:
               
chr9:766906-767092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
35, 49
               

               
Conread position:
               
243-430
               

               
Cow position:
               
chr9:32815882-32815703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 101
               

               
Conread position:
               
243-459
               

               
Cow position:
               
chr9:51005131-51004925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
56, 22
               

               
Conread position:
               
243-464
               

               
Cow position:
               
chr9:49710088-49709871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
35, 143
               

               
Conread position:
               
244-462
               

               
Cow position:
               
chr9:40604193-40603973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 71
               

               
Conread position:
               
244-491
               

               
Cow position:
               
chr9:6840254-6839990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
245-458
               

               
Cow position:
               
chr9:3186385-3186158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
7, 150
               

               
Conread position:
               
246-491
               

               
Cow position:
               
chr9:56011738-56011496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
32, 139
               

               
Conread position:
               
248-439
               

               
Cow position:
               
chr9:35128733-35128547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 65
               

               
Conread position:
               
248-501
               

               
Cow position:
               
chr9:15006512-15006768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
26, 102
               

               
Conread position:
               
249-464
               

               
Cow position:
               
chr9:5238634-5238422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 96
               

               
Conread position:
               
249-465
               

               
Cow position:
               
chr9:11319394-11319609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 42
               

               
Conread position:
               
250-458
               

               
Cow position:
               
chr9:50702875-50703079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
28, 135
               

               
Conread position:
               
250-462
               

               
Cow position:
               
chr9:45141368-45141572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
252-479
               

               
Cow position:
               
chr9:15225055-15225286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
26, 66
               

               
Conread position:
               
253-479
               

               
Cow position:
               
chr9:52619886-52619658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
25, 130
               

               
Conread position:
               
254-464
               

               
Cow position:
               
chr9:4267747-4267956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
24, 91
               

               
Conread position:
               
255-440
               

               
Cow position:
               
chr9:43623492-43623308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
23, 113
               

               
Conread position:
               
255-459
               

               
Cow position:
               
chr9:11313275-11313479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
23, 31
               

               
Conread position:
               
255-460
               

               
Cow position:
               
chr9:31292920-31292719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
256-441
               

               
Cow position:
               
chr9:34058295-34058107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
256-443
               

               
Cow position:
               
chr9:40327318-40327503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
22, 141
               

               
Conread position:
               
256-451
               

               
Cow position:
               
chr9:11317707-11317511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
22, 163
               

               
Conread position:
               
256-451
               

               
Cow position:
               
chr9:23576248-23576444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
256-451
               

               
Cow position:
               
chr9:30735948-30735752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
256-459
               

               
Cow position:
               
chr9:32711163-32710960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
20, 68
               

               
Conread position:
               
256-459
               

               
Cow position:
               
chr9:53138888-53139099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
22, 187
               

               
Conread position:
               
256-483
               

               
Cow position:
               
chr9:33038227-33038459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
22, 96
               

               
Conread position:
               
258-452
               

               
Cow position:
               
chr9:11186318-11186124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
20, 64
               

               
Conread position:
               
259-459
               

               
Cow position:
               
chr9:6339030-6338824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
260-438
               

               
Cow position:
               
chr9:39428569-39428745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
20, 93
               

               
Conread position:
               
260-440
               

               
Cow position:
               
chr9:32306367-32306548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
260-440
               

               
Cow position:
               
chr9:53762928-53762751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
18, 85
               

               
Conread position:
               
260-459
               

               
Cow position:
               
chr9:1916514-1916318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
18, 31
               

               
Conread position:
               
260-464
               

               
Cow position:
               
chr9:1532105-1532301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 61
               

               
Conread position:
               
260-491
               

               
Cow position:
               
chr9:25805065-25804829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
260-491
               

               
Cow position:
               
chr9:30477557-30477778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
18, 32
               

               
Conread position:
               
261-455
               

               
Cow position:
               
chr9:1973169-1972977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
6, 52
               

               
Conread position:
               
261-459
               

               
Cow position:
               
chr9:41469632-41469835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
261-464
               

               
Cow position:
               
chr9:50667650-50667447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 34
               

               
Conread position:
               
261-464
               

               
Cow position:
               
chr9:58734601-58734394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
261-479
               

               
Cow position:
               
chr9:27279544-27279319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
17, 178
               

               
Conread position:
               
261-502
               

               
Cow position:
               
chr9:3371805-3371552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
18, 178
               

               
Conread position:
               
262-437
               

               
Cow position:
               
chr9:35303067-35303242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 157
               

               
Conread position:
               
263-464
               

               
Cow position:
               
chr9:11198121-11198317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
168, 14
               

               
Conread position:
               
264-435
               

               
Cow position:
               
chr9:43048403-43048572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
14, 28
               

               
Conread position:
               
265-439
               

               
Cow position:
               
chr9:63578049-63577877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
13, 151
               

               
Conread position:
               
265-450
               

               
Cow position:
               
chr9:42264443-42264246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
265-491
               

               
Cow position:
               
chr9:42062338-42062096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
266-440
               

               
Cow position:
               
chr9:48628251-48628082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
12, 6
               

               
Conread position:
               
266-464
               

               
Cow position:
               
chr9:30652489-30652684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
155, 11
               

               
Conread position:
               
267-464
               

               
Cow position:
               
chr9:44833745-44833937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
12, 49
               

               
Conread position:
               
267-465
               

               
Cow position:
               
chr9:53211277-53211466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
267-515
               

               
Cow position:
               
chr9:17799850-17799600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
11, 23
               

               
Conread position:
               
268-464
               

               
Cow position:
               
chr9:6117928-6118123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
11, 24
               

               
Conread position:
               
269-426
               

               
Cow position:
               
chr9:51011322-51011481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
9, 111
               

               
Conread position:
               
271-459
               

               
Cow position:
               
chr9:16811443-16811623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 47
               

               
Conread position:
               
271-459
               

               
Cow position:
               
chr9:43444011-43443832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
7, 46
               

               
Conread position:
               
271-459
               

               
Cow position:
               
chr9:46235477-46235288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
271-464
               

               
Cow position:
               
chr9:30195429-30195240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
7, 74
               

               
Conread position:
               
273-489
               

               
Cow position:
               
chr9:29578458-29578247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
5, 19
               

               
Conread position:
               
274-438
               

               
Cow position:
               
chr9:8920210-8920050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
275-491
               

               
Cow position:
               
chr9:19493248-19493469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
120, 69
               

               
Conread position:
               
277-429
               

               
Cow position:
               
chr9:28391822-28391974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
38, 44
               

               
Conread position:
               
277-431
               

               
Cow position:
               
chr9:52637947-52638102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
277-436
               

               
Cow position:
               
chr9:58614702-58614538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
277-464
               

               
Cow position:
               
chr9:61303216-61303026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
145, 67
               

               
Conread position:
               
278-395
               

               
Cow position:
               
chr9:23970714-23970830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
278-458
               

               
Cow position:
               
chr9:62668464-62668280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
65, 100
               

               
Conread position:
               
279-491
               

               
Cow position:
               
chr9:4512698-4512485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
69, 88
               

               
Conread position:
               
280-450
               

               
Cow position:
               
chr9:28451947-28452117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 71
               

               
Conread position:
               
280-459
               

               
Cow position:
               
chr9:3847879-3847699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
17, 37
               

               
Conread position:
               
284-459
               

               
Cow position:
               
chr9:47500001-47500181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
284-479
               

               
Cow position:
               
chr9:31270984-31270790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
189, 33
               

               
Conread position:
               
285-459
               

               
Cow position:
               
chr9:35890719-35890896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
286-459
               

               
Cow position:
               
chr9:40543117-40543294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
9, 76
               

               
Conread position:
               
289-464
               

               
Cow position:
               
chr9:1909183-1909355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
289-491
               

               
Cow position:
               
chr9:35027967-35028167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
63, 24
               

               
Conread position:
               
294-461
               

               
Cow position:
               
chr9:29330445-29330605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
9, 119
               

               
Conread position:
               
296-464
               

               
Cow position:
               
chr9:9654118-9654286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
126, 48
               

               
Conread position:
               
296-479
               

               
Cow position:
               
chr9:8525028-8524852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
296-491
               

               
Cow position:
               
chr9:37678081-37677887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
50, 73
               

               
Conread position:
               
297-459
               

               
Cow position:
               
chr9:31557537-31557700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
138, 21
               

               
Conread position:
               
298-455
               

               
Cow position:
               
chr9:9815609-9815446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
19, 109
               

               
Conread position:
               
298-459
               

               
Cow position:
               
chr9:1879568-1879411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
140, 107
               

               
Conread position:
               
298-459
               

               
Cow position:
               
chr9:14358354-14358194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
298-459
               

               
Cow position:
               
chr9:49417179-49417018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
91, 81
               

               
Conread position:
               
298-462
               

               
Cow position:
               
chr9:30124112-30123947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
128, 46
               

               
Conread position:
               
298-464
               

               
Cow position:
               
chr9:11123296-11123459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
127, 23
               

               
Conread position:
               
298-464
               

               
Cow position:
               
chr9:50543228-50543400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
17, 46
               

               
Conread position:
               
298-472
               

               
Cow position:
               
chr9:49279666-49279482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
110, 52
               

               
Conread position:
               
298-491
               

               
Cow position:
               
chr9:10650109-10650303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
17, 88
               

               
Conread position:
               
299-459
               

               
Cow position:
               
chr9:52707287-52707447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
301-451
               

               
Cow position:
               
chr9:50059099-50058949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
110, 66
               

               
Conread position:
               
301-479
               

               
Cow position:
               
chr9:62151290-62151117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
14, 19
               

               
Conread position:
               
303-491
               

               
Cow position:
               
chr9:56065735-56065553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
154, 58
               

               
Conread position:
               
304-456
               

               
Cow position:
               
chr9:31638455-31638609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
305-479
               

               
Cow position:
               
chr9:55321822-55321647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
123, 45
               

               
Conread position:
               
307-464
               

               
Cow position:
               
chr9:12225798-12225952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
44, 76
               

               
Conread position:
               
308-459
               

               
Cow position:
               
chr9:8901042-8901196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
131, 23
               

               
Conread position:
               
309-450
               

               
Cow position:
               
chr9:10634872-10635011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
309-459
               

               
Cow position:
               
chr9:11168911-11168761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
309-459
               

               
Cow position:
               
chr9:51720721-51720869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
309-463
               

               
Cow position:
               
chr9:44921210-44921366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
310-459
               

               
Cow position:
               
chr9:47445847-47445997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
128, 103
               

               
Conread position:
               
319-458
               

               
Cow position:
               
chr9:26477387-26477248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
92, 64
               

               
Conread position:
               
319-459
               

               
Cow position:
               
chr9:43937110-43936976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
319-461
               

               
Cow position:
               
chr9:6851897-6852043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
319-464
               

               
Cow position:
               
chr9:4323987-4324131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
322-459
               

               
Cow position:
               
chr9:50202737-50202604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
322-491
               

               
Cow position:
               
chr9:35105613-35105793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
24, 59
               

               
Conread position:
               
323-438
               

               
Cow position:
               
chr9:38581140-38581030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
323-458
               

               
Cow position:
               
chr9:1755975-1756113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
325-470
               

               
Cow position:
               
chr9:18029229-18029383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
84, 25
               

               
Conread position:
               
325-606
               

               
Cow position:
               
chr9:49292981-49293256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
140, 25
               

               
Conread position:
               
326-458
               

               
Cow position:
               
chr9:19034504-19034378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
327-458
               

               
Cow position:
               
chr9:40215406-40215275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
24, 97
               

               
Conread position:
               
327-491
               

               
Cow position:
               
chr9:3774327-3774158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
328-440
               

               
Cow position:
               
chr9:36843949-36843837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
329-459
               

               
Cow position:
               
chr9:11303917-11304048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
21, 71
               

               
Conread position:
               
329-477
               

               
Cow position:
               
chr9:31403078-31403230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
331-479
               

               
Cow position:
               
chr9:33697185-33697038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
107, 18
               

               
Conread position:
               
334-464
               

               
Cow position:
               
chr9:33114501-33114371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
93, 17
               

               
Conread position:
               
338-459
               

               
Cow position:
               
chr9:40005629-40005505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
341-482
               

               
Cow position:
               
chr9:11377793-11377937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
343-461
               

               
Cow position:
               
chr9:1867597-1867479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
343-464
               

               
Cow position:
               
chr9:5069211-5069092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
343-496
               

               
Cow position:
               
chr9:34284095-34283945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
103, 58
               

               
Conread position:
               
344-508
               

               
Cow position:
               
chr9:52839740-52839900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
345-455
               

               
Cow position:
               
chr9:32669802-32669912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
82, 91
               

               
Conread position:
               
347-464
               

               
Cow position:
               
chr9:10819689-10819805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
348-463
               

               
Cow position:
               
chr9:60081048-60080932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
355-464
               

               
Cow position:
               
chr9:53326615-53326729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
357-464
               

               
Cow position:
               
chr9:1850981-1851088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 95
               

               
Conread position:
               
360-465
               

               
Cow position:
               
chr9:4630235-4630128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               
Show alignments to all cow chromosomes.