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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8060J09.5
        

               
Conread position:
               
126-491
               

               
Cow position:
               
chrX:42010962-42011340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
32, 16
               

               
Conread position:
               
128-459
               

               
Cow position:
               
chrX:22821746-22822071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
128-464
               

               
Cow position:
               
chrX:27680095-27680428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 84
               

               
Conread position:
               
138-464
               

               
Cow position:
               
chrX:33493474-33493809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
20, 30
               

               
Conread position:
               
157-437
               

               
Cow position:
               
chrX:24259851-24259581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
14, 59
               

               
Conread position:
               
158-348
               

               
Cow position:
               
chrX:30729677-30729486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 44
               

               
Conread position:
               
166-464
               

               
Cow position:
               
chrX:47757197-47756898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 31
               

               
Conread position:
               
167-363
               

               
Cow position:
               
chrX:13429550-13429354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 46
               

               
Conread position:
               
167-440
               

               
Cow position:
               
chrX:21815993-21816269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 63
               

               
Conread position:
               
167-458
               

               
Cow position:
               
chrX:38840622-38840909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
43, 8
               

               
Conread position:
               
167-460
               

               
Cow position:
               
chrX:15007411-15007123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 14
               

               
Conread position:
               
167-461
               

               
Cow position:
               
chrX:42462008-42461717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
176-438
               

               
Cow position:
               
chrX:25713540-25713795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
10, 43
               

               
Conread position:
               
177-457
               

               
Cow position:
               
chrX:2383231-2383508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
19, 56
               

               
Conread position:
               
177-458
               

               
Cow position:
               
chrX:17794735-17794997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
19, 37
               

               
Conread position:
               
177-464
               

               
Cow position:
               
chrX:39938776-39938493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 51
               

               
Conread position:
               
177-489
               

               
Cow position:
               
chrX:28134089-28134397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 54
               

               
Conread position:
               
178-346
               

               
Cow position:
               
chrX:41192431-41192598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
12, 44
               

               
Conread position:
               
178-440
               

               
Cow position:
               
chrX:39347045-39346767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 56
               

               
Conread position:
               
178-443
               

               
Cow position:
               
chrX:35409409-35409670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 98
               

               
Conread position:
               
178-461
               

               
Cow position:
               
chrX:41879190-41878902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 35
               

               
Conread position:
               
180-314
               

               
Cow position:
               
chrX:22115530-22115398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
181-431
               

               
Cow position:
               
chrX:28111258-28111504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
97, 34
               

               
Conread position:
               
189-457
               

               
Cow position:
               
chrX:6265829-6265574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 104
               

               
Conread position:
               
190-464
               

               
Cow position:
               
chrX:45430259-45429992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
27, 121
               

               
Conread position:
               
191-364
               

               
Cow position:
               
chrX:33886119-33886294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 39
               

               
Conread position:
               
191-438
               

               
Cow position:
               
chrX:19023195-19023447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
17, 40
               

               
Conread position:
               
196-464
               

               
Cow position:
               
chrX:39126102-39126356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
19, 43
               

               
Conread position:
               
196-491
               

               
Cow position:
               
chrX:9201309-9201607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
13, 36
               

               
Conread position:
               
200-514
               

               
Cow position:
               
chrX:23091650-23091951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 92
               

               
Conread position:
               
201-362
               

               
Cow position:
               
chrX:13058349-13058510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
16, 90
               

               
Conread position:
               
201-385
               

               
Cow position:
               
chrX:31745282-31745092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
8, 124
               

               
Conread position:
               
201-464
               

               
Cow position:
               
chrX:43049111-43049373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 231
               

               
Conread position:
               
201-508
               

               
Cow position:
               
chrX:29602065-29601753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 40
               

               
Conread position:
               
205-419
               

               
Cow position:
               
chrX:47046748-47046522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
206-400
               

               
Cow position:
               
chrX:7806151-7806345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
11, 52
               

               
Conread position:
               
206-464
               

               
Cow position:
               
chrX:4750527-4750273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
16, 58
               

               
Conread position:
               
208-425
               

               
Cow position:
               
chrX:36283121-36283342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
208-437
               

               
Cow position:
               
chrX:36693011-36693238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
9, 85
               

               
Conread position:
               
208-439
               

               
Cow position:
               
chrX:18456168-18456405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
9, 145
               

               
Conread position:
               
208-458
               

               
Cow position:
               
chrX:21064062-21064307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
9, 65
               

               
Conread position:
               
208-462
               

               
Cow position:
               
chrX:34990817-34991064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
208-464
               

               
Cow position:
               
chrX:7721760-7722022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 145
               

               
Conread position:
               
208-464
               

               
Cow position:
               
chrX:42470161-42469912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
9, 84
               

               
Conread position:
               
208-464
               

               
Cow position:
               
chrX:45110433-45110685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
68, 6
               

               
Conread position:
               
208-464
               

               
Cow position:
               
chrX:45598828-45598573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
7, 134
               

               
Conread position:
               
208-465
               

               
Cow position:
               
chrX:34192453-34192701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
9, 47
               

               
Conread position:
               
208-500
               

               
Cow position:
               
chrX:6488362-6488647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 88
               

               
Conread position:
               
208-503
               

               
Cow position:
               
chrX:40788980-40789284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
9, 152
               

               
Conread position:
               
209-348
               

               
Cow position:
               
chrX:30919615-30919474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
209-349
               

               
Cow position:
               
chrX:6659150-6659294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
8, 58
               

               
Conread position:
               
209-349
               

               
Cow position:
               
chrX:18812035-18812169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
209-355
               

               
Cow position:
               
chrX:29049747-29049884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
209-358
               

               
Cow position:
               
chrX:25301976-25301827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
8, 84
               

               
Conread position:
               
209-360
               

               
Cow position:
               
chrX:25618135-25617982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
209-364
               

               
Cow position:
               
chrX:4554175-4554332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
209-384
               

               
Cow position:
               
chrX:4865028-4865195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 69
               

               
Conread position:
               
209-412
               

               
Cow position:
               
chrX:16541899-16541694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
209-416
               

               
Cow position:
               
chrX:18195720-18195916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 20
               

               
Conread position:
               
209-419
               

               
Cow position:
               
chrX:44737214-44737001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
71, 161
               

               
Conread position:
               
209-437
               

               
Cow position:
               
chrX:25458860-25458629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
209-439
               

               
Cow position:
               
chrX:45414523-45414295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
10, 84
               

               
Conread position:
               
209-440
               

               
Cow position:
               
chrX:2648573-2648348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
209-447
               

               
Cow position:
               
chrX:38094748-38094509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
209-448
               

               
Cow position:
               
chrX:45043335-45043588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
209-451
               

               
Cow position:
               
chrX:23451394-23451148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
209-451
               

               
Cow position:
               
chrX:45786907-45787147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
209-452
               

               
Cow position:
               
chrX:15037966-15037720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
209-454
               

               
Cow position:
               
chrX:32747435-32747703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
209-456
               

               
Cow position:
               
chrX:3654381-3654630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
8, 137
               

               
Conread position:
               
209-459
               

               
Cow position:
               
chrX:4633074-4632833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
8, 83
               

               
Conread position:
               
209-459
               

               
Cow position:
               
chrX:13912856-13913095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
8, 85
               

               
Conread position:
               
209-459
               

               
Cow position:
               
chrX:21004461-21004709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
69, 22
               

               
Conread position:
               
209-459
               

               
Cow position:
               
chrX:21672328-21672579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 226
               

               
Conread position:
               
209-459
               

               
Cow position:
               
chrX:37836363-37836611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 111
               

               
Conread position:
               
209-459
               

               
Cow position:
               
chrX:46722964-46722709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
8, 212
               

               
Conread position:
               
209-459
               

               
Cow position:
               
chrX:47344071-47344321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
8, 119
               

               
Conread position:
               
209-461
               

               
Cow position:
               
chrX:28157262-28157528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
8, 117
               

               
Conread position:
               
209-461
               

               
Cow position:
               
chrX:32743315-32743565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
8, 84
               

               
Conread position:
               
209-464
               

               
Cow position:
               
chrX:4768527-4768771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
8, 70
               

               
Conread position:
               
209-464
               

               
Cow position:
               
chrX:7571683-7571935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
8, 84
               

               
Conread position:
               
209-464
               

               
Cow position:
               
chrX:9997559-9997304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 72
               

               
Conread position:
               
209-464
               

               
Cow position:
               
chrX:23970166-23970409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 83
               

               
Conread position:
               
209-464
               

               
Cow position:
               
chrX:31436257-31436504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
8, 86
               

               
Conread position:
               
209-464
               

               
Cow position:
               
chrX:37910230-37910475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
232, 67
               

               
Conread position:
               
209-464
               

               
Cow position:
               
chrX:38071994-38071736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
9, 204
               

               
Conread position:
               
209-464
               

               
Cow position:
               
chrX:44053035-44053290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
8, 84
               

               
Conread position:
               
209-465
               

               
Cow position:
               
chrX:34441673-34441417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
209-482
               

               
Cow position:
               
chrX:44396792-44397064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 84
               

               
Conread position:
               
209-491
               

               
Cow position:
               
chrX:7351076-7351359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 47
               

               
Conread position:
               
209-491
               

               
Cow position:
               
chrX:25035610-25035323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
209-491
               

               
Cow position:
               
chrX:41167187-41166903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
209-491
               

               
Cow position:
               
chrX:42507870-42507589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
8, 84
               

               
Conread position:
               
209-501
               

               
Cow position:
               
chrX:13382101-13382398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 277
               

               
Conread position:
               
210-355
               

               
Cow position:
               
chrX:11448293-11448146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
210-390
               

               
Cow position:
               
chrX:41733409-41733232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
66, 84
               

               
Conread position:
               
210-394
               

               
Cow position:
               
chrX:35937297-35937121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 59
               

               
Conread position:
               
210-415
               

               
Cow position:
               
chrX:25411615-25411821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
71, 77
               

               
Conread position:
               
210-427
               

               
Cow position:
               
chrX:42282211-42282420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
71, 98
               

               
Conread position:
               
210-428
               

               
Cow position:
               
chrX:41403750-41403972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
210-428
               

               
Cow position:
               
chrX:41410298-41410520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
210-429
               

               
Cow position:
               
chrX:15545672-15545886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 64
               

               
Conread position:
               
210-429
               

               
Cow position:
               
chrX:34663064-34662854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
68, 18
               

               
Conread position:
               
210-434
               

               
Cow position:
               
chrX:21665818-21665595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 85
               

               
Conread position:
               
210-438
               

               
Cow position:
               
chrX:34554505-34554729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
30, 70
               

               
Conread position:
               
210-441
               

               
Cow position:
               
chrX:1728642-1728424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
16, 83
               

               
Conread position:
               
210-446
               

               
Cow position:
               
chrX:35258953-35258719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
68, 179
               

               
Conread position:
               
210-454
               

               
Cow position:
               
chrX:24317841-24318083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
73, 18
               

               
Conread position:
               
210-456
               

               
Cow position:
               
chrX:46606735-46606487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
210-457
               

               
Cow position:
               
chrX:40116200-40116440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
68, 84
               

               
Conread position:
               
210-459
               

               
Cow position:
               
chrX:46032943-46032702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
68, 108
               

               
Conread position:
               
210-462
               

               
Cow position:
               
chrX:17725753-17726003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
68, 82
               

               
Conread position:
               
210-462
               

               
Cow position:
               
chrX:31294767-31294544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
13, 41
               

               
Conread position:
               
210-464
               

               
Cow position:
               
chrX:7277702-7277941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
68, 6
               

               
Conread position:
               
210-464
               

               
Cow position:
               
chrX:30543507-30543254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
68, 18
               

               
Conread position:
               
210-464
               

               
Cow position:
               
chrX:34238499-34238749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
7, 20
               

               
Conread position:
               
210-464
               

               
Cow position:
               
chrX:34532306-34532550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 83
               

               
Conread position:
               
210-464
               

               
Cow position:
               
chrX:42492735-42492493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 18
               

               
Conread position:
               
210-464
               

               
Cow position:
               
chrX:45436984-45437243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
12, 178
               

               
Conread position:
               
210-479
               

               
Cow position:
               
chrX:27772181-27771919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
68, 48
               

               
Conread position:
               
210-487
               

               
Cow position:
               
chrX:14221858-14222132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
44, 38
               

               
Conread position:
               
210-491
               

               
Cow position:
               
chrX:917594-917309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 116
               

               
Conread position:
               
210-491
               

               
Cow position:
               
chrX:14599308-14599596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 141
               

               
Conread position:
               
210-491
               

               
Cow position:
               
chrX:24366054-24365762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
210-491
               

               
Cow position:
               
chrX:27705368-27705645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
133, 68
               

               
Conread position:
               
210-491
               

               
Cow position:
               
chrX:38963884-38964167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 83
               

               
Conread position:
               
210-491
               

               
Cow position:
               
chrX:40481096-40480810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
210-506
               

               
Cow position:
               
chrX:16689270-16689569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
211-355
               

               
Cow position:
               
chrX:25404557-25404411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
211-459
               

               
Cow position:
               
chrX:157993-157747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
60, 19
               

               
Conread position:
               
212-335
               

               
Cow position:
               
chrX:5856546-5856422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
212-345
               

               
Cow position:
               
chrX:23017782-23017917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
212-380
               

               
Cow position:
               
chrX:25036920-25036750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
11, 102
               

               
Conread position:
               
212-451
               

               
Cow position:
               
chrX:15438872-15438632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
212-453
               

               
Cow position:
               
chrX:2186039-2186270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
64, 103
               

               
Conread position:
               
212-459
               

               
Cow position:
               
chrX:10095806-10096057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
5, 109
               

               
Conread position:
               
212-459
               

               
Cow position:
               
chrX:10123566-10123328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
16, 68
               

               
Conread position:
               
212-459
               

               
Cow position:
               
chrX:33466394-33466633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 81
               

               
Conread position:
               
212-459
               

               
Cow position:
               
chrX:41790663-41790418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
66, 16
               

               
Conread position:
               
212-503
               

               
Cow position:
               
chrX:20752040-20752326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 80
               

               
Conread position:
               
213-381
               

               
Cow position:
               
chrX:32978474-32978311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
65, 61
               

               
Conread position:
               
213-451
               

               
Cow position:
               
chrX:37416293-37416055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 79
               

               
Conread position:
               
213-458
               

               
Cow position:
               
chrX:31250174-31250412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
65, 19
               

               
Conread position:
               
213-459
               

               
Cow position:
               
chrX:28105703-28105943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
66, 18
               

               
Conread position:
               
213-464
               

               
Cow position:
               
chrX:4269286-4269035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 80
               

               
Conread position:
               
213-464
               

               
Cow position:
               
chrX:11939142-11938905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
213-491
               

               
Cow position:
               
chrX:29120840-29121106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
65, 16
               

               
Conread position:
               
214-360
               

               
Cow position:
               
chrX:126575-126717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
64, 102
               

               
Conread position:
               
214-394
               

               
Cow position:
               
chrX:22482906-22482727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
64, 97
               

               
Conread position:
               
214-432
               

               
Cow position:
               
chrX:160250-160035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
64, 18
               

               
Conread position:
               
214-436
               

               
Cow position:
               
chrX:16284164-16283939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
56, 76
               

               
Conread position:
               
214-438
               

               
Cow position:
               
chrX:678785-678568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
64, 117
               

               
Conread position:
               
214-439
               

               
Cow position:
               
chrX:37232192-37232417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
64, 131
               

               
Conread position:
               
214-440
               

               
Cow position:
               
chrX:1105021-1104794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
214-440
               

               
Cow position:
               
chrX:6544039-6544259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
64, 81
               

               
Conread position:
               
214-451
               

               
Cow position:
               
chrX:26492785-26493021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
64, 223
               

               
Conread position:
               
214-457
               

               
Cow position:
               
chrX:17631019-17630780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
62, 19
               

               
Conread position:
               
214-459
               

               
Cow position:
               
chrX:1514618-1514387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
214-459
               

               
Cow position:
               
chrX:12018058-12018317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
64, 75
               

               
Conread position:
               
214-459
               

               
Cow position:
               
chrX:14162974-14163217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
64, 202
               

               
Conread position:
               
214-459
               

               
Cow position:
               
chrX:20792035-20791790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
64, 78
               

               
Conread position:
               
214-459
               

               
Cow position:
               
chrX:37489513-37489744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 83
               

               
Conread position:
               
214-459
               

               
Cow position:
               
chrX:48652944-48652696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
62, 172
               

               
Conread position:
               
214-461
               

               
Cow position:
               
chrX:20340108-20339864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 71
               

               
Conread position:
               
214-464
               

               
Cow position:
               
chrX:12980048-12979804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
64, 131
               

               
Conread position:
               
214-464
               

               
Cow position:
               
chrX:19015225-19015467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
64, 71
               

               
Conread position:
               
214-464
               

               
Cow position:
               
chrX:38006985-38006736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
64, 131
               

               
Conread position:
               
214-464
               

               
Cow position:
               
chrX:38439256-38439511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 138
               

               
Conread position:
               
214-479
               

               
Cow position:
               
chrX:17888623-17888373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
224, 56
               

               
Conread position:
               
214-491
               

               
Cow position:
               
chrX:13868477-13868761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
64, 14
               

               
Conread position:
               
214-491
               

               
Cow position:
               
chrX:19188719-19188990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 103
               

               
Conread position:
               
214-491
               

               
Cow position:
               
chrX:30133541-30133259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
64, 43
               

               
Conread position:
               
214-491
               

               
Cow position:
               
chrX:42247401-42247123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 102
               

               
Conread position:
               
214-499
               

               
Cow position:
               
chrX:47191616-47191343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
209, 64
               

               
Conread position:
               
215-429
               

               
Cow position:
               
chrX:1055604-1055401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
63, 18
               

               
Conread position:
               
215-459
               

               
Cow position:
               
chrX:27442771-27442532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
63, 40
               

               
Conread position:
               
215-479
               

               
Cow position:
               
chrX:32171098-32170839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
133, 63
               

               
Conread position:
               
216-330
               

               
Cow position:
               
chrX:29193793-29193903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
78, 12
               

               
Conread position:
               
216-333
               

               
Cow position:
               
chrX:33519402-33519520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-341
               

               
Cow position:
               
chrX:32871001-32870876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
63, 39
               

               
Conread position:
               
216-347
               

               
Cow position:
               
chrX:42841265-42841134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
216-347
               

               
Cow position:
               
chrX:47243494-47243361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
216-348
               

               
Cow position:
               
chrX:9837923-9838056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
216-348
               

               
Cow position:
               
chrX:25163603-25163733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-348
               

               
Cow position:
               
chrX:26619578-26619447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-349
               

               
Cow position:
               
chrX:16531784-16531912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
216-349
               

               
Cow position:
               
chrX:45787439-45787566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-357
               

               
Cow position:
               
chrX:33205207-33205072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
57, 76
               

               
Conread position:
               
216-358
               

               
Cow position:
               
chrX:7382108-7382247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
62, 75
               

               
Conread position:
               
216-358
               

               
Cow position:
               
chrX:15305503-15305364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 44
               

               
Conread position:
               
216-358
               

               
Cow position:
               
chrX:31473307-31473450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 130
               

               
Conread position:
               
216-360
               

               
Cow position:
               
chrX:2523945-2523800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
62, 129
               

               
Conread position:
               
216-363
               

               
Cow position:
               
chrX:25283361-25283221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
62, 81
               

               
Conread position:
               
216-373
               

               
Cow position:
               
chrX:48536880-48536724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
62, 23
               

               
Conread position:
               
216-381
               

               
Cow position:
               
chrX:6639909-6640076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
12, 77
               

               
Conread position:
               
216-381
               

               
Cow position:
               
chrX:37072191-37072354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
216-382
               

               
Cow position:
               
chrX:42855193-42855362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-385
               

               
Cow position:
               
chrX:15596823-15596995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-396
               

               
Cow position:
               
chrX:48227828-48227647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-399
               

               
Cow position:
               
chrX:4123620-4123802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
130, 58
               

               
Conread position:
               
216-400
               

               
Cow position:
               
chrX:2206759-2206585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-403
               

               
Cow position:
               
chrX:7513301-7513482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
62, 19
               

               
Conread position:
               
216-404
               

               
Cow position:
               
chrX:44731379-44731567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
62, 129
               

               
Conread position:
               
216-408
               

               
Cow position:
               
chrX:4482747-4482941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 56
               

               
Conread position:
               
216-410
               

               
Cow position:
               
chrX:45089228-45089424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
62, 38
               

               
Conread position:
               
216-413
               

               
Cow position:
               
chrX:26531743-26531941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
216-415
               

               
Cow position:
               
chrX:38967435-38967628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
216-417
               

               
Cow position:
               
chrX:17743845-17744047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 129
               

               
Conread position:
               
216-418
               

               
Cow position:
               
chrX:33020271-33020467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-422
               

               
Cow position:
               
chrX:36922432-36922631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
216-426
               

               
Cow position:
               
chrX:6563297-6563512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 44
               

               
Conread position:
               
216-426
               

               
Cow position:
               
chrX:25571211-25571005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 78
               

               
Conread position:
               
216-426
               

               
Cow position:
               
chrX:30162782-30162988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-426
               

               
Cow position:
               
chrX:42381315-42381110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-426
               

               
Cow position:
               
chrX:42587644-42587437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
216-427
               

               
Cow position:
               
chrX:35042004-35042217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-428
               

               
Cow position:
               
chrX:24424603-24424396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
62, 89
               

               
Conread position:
               
216-428
               

               
Cow position:
               
chrX:41083710-41083919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
216-429
               

               
Cow position:
               
chrX:9416908-9416698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
216-429
               

               
Cow position:
               
chrX:28847094-28846888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-429
               

               
Cow position:
               
chrX:30921970-30922178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
62, 43
               

               
Conread position:
               
216-429
               

               
Cow position:
               
chrX:32020337-32020126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
216-430
               

               
Cow position:
               
chrX:15485843-15485630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
26, 77
               

               
Conread position:
               
216-430
               

               
Cow position:
               
chrX:21663094-21663299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
62, 28
               

               
Conread position:
               
216-430
               

               
Cow position:
               
chrX:27514653-27514863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
63, 161
               

               
Conread position:
               
216-430
               

               
Cow position:
               
chrX:34454454-34454660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
132, 61
               

               
Conread position:
               
216-430
               

               
Cow position:
               
chrX:45566415-45566631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
53, 171
               

               
Conread position:
               
216-431
               

               
Cow position:
               
chrX:40452428-40452215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 138
               

               
Conread position:
               
216-432
               

               
Cow position:
               
chrX:33803228-33803009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
60, 129
               

               
Conread position:
               
216-433
               

               
Cow position:
               
chrX:4905204-4904991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 101
               

               
Conread position:
               
216-433
               

               
Cow position:
               
chrX:10866082-10865868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-433
               

               
Cow position:
               
chrX:18194698-18194911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
216-433
               

               
Cow position:
               
chrX:19019327-19019107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 109
               

               
Conread position:
               
216-433
               

               
Cow position:
               
chrX:30484420-30484202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
15, 37
               

               
Conread position:
               
216-433
               

               
Cow position:
               
chrX:32584028-32583813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 199
               

               
Conread position:
               
216-433
               

               
Cow position:
               
chrX:47042206-47041993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 43
               

               
Conread position:
               
216-436
               

               
Cow position:
               
chrX:11806232-11806012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
67, 129
               

               
Conread position:
               
216-436
               

               
Cow position:
               
chrX:17964737-17964518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-436
               

               
Cow position:
               
chrX:19930441-19930652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
216-437
               

               
Cow position:
               
chrX:13647999-13647784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
62, 71
               

               
Conread position:
               
216-437
               

               
Cow position:
               
chrX:35388122-35387900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 130
               

               
Conread position:
               
216-438
               

               
Cow position:
               
chrX:8558678-8558461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
61, 129
               

               
Conread position:
               
216-438
               

               
Cow position:
               
chrX:11561939-11562161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
62, 22
               

               
Conread position:
               
216-438
               

               
Cow position:
               
chrX:17042475-17042695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
64, 88
               

               
Conread position:
               
216-438
               

               
Cow position:
               
chrX:25337964-25338189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
64, 129
               

               
Conread position:
               
216-438
               

               
Cow position:
               
chrX:28580006-28580232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
14, 130
               

               
Conread position:
               
216-438
               

               
Cow position:
               
chrX:35609771-35609991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-438
               

               
Cow position:
               
chrX:36840658-36840874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
216-438
               

               
Cow position:
               
chrX:41560454-41560250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
212, 61
               

               
Conread position:
               
216-438
               

               
Cow position:
               
chrX:42589973-42589756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 129
               

               
Conread position:
               
216-439
               

               
Cow position:
               
chrX:11674849-11675066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
27, 77
               

               
Conread position:
               
216-439
               

               
Cow position:
               
chrX:18078125-18077903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 200
               

               
Conread position:
               
216-439
               

               
Cow position:
               
chrX:20877978-20877756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 200
               

               
Conread position:
               
216-439
               

               
Cow position:
               
chrX:25237962-25238173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-439
               

               
Cow position:
               
chrX:30143500-30143278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 200
               

               
Conread position:
               
216-440
               

               
Cow position:
               
chrX:4996396-4996601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
216-440
               

               
Cow position:
               
chrX:11655871-11656097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 137
               

               
Conread position:
               
216-440
               

               
Cow position:
               
chrX:13177680-13177462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
62, 74
               

               
Conread position:
               
216-440
               

               
Cow position:
               
chrX:16703455-16703680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-440
               

               
Cow position:
               
chrX:25419376-25419152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-440
               

               
Cow position:
               
chrX:42086646-42086862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
62, 129
               

               
Conread position:
               
216-441
               

               
Cow position:
               
chrX:12826532-12826755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 129
               

               
Conread position:
               
216-441
               

               
Cow position:
               
chrX:23264652-23264424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-441
               

               
Cow position:
               
chrX:35240649-35240874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 113
               

               
Conread position:
               
216-443
               

               
Cow position:
               
chrX:35284407-35284628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
216-444
               

               
Cow position:
               
chrX:27106043-27106273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-446
               

               
Cow position:
               
chrX:1331719-1331951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-446
               

               
Cow position:
               
chrX:7053951-7053720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
62, 105
               

               
Conread position:
               
216-446
               

               
Cow position:
               
chrX:11410242-11410021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
206, 62
               

               
Conread position:
               
216-446
               

               
Cow position:
               
chrX:39071482-39071706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
216-447
               

               
Cow position:
               
chrX:42339151-42338936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 80
               

               
Conread position:
               
216-449
               

               
Cow position:
               
chrX:3161231-3161012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
216-450
               

               
Cow position:
               
chrX:33639756-33639994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
216-450
               

               
Cow position:
               
chrX:41157096-41157331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 54
               

               
Conread position:
               
216-451
               

               
Cow position:
               
chrX:5123576-5123340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-451
               

               
Cow position:
               
chrX:14819497-14819735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 200
               

               
Conread position:
               
216-451
               

               
Cow position:
               
chrX:27498553-27498789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-451
               

               
Cow position:
               
chrX:43983956-43984194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 107
               

               
Conread position:
               
216-451
               

               
Cow position:
               
chrX:46044829-46045062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
62, 102
               

               
Conread position:
               
216-454
               

               
Cow position:
               
chrX:28097910-28098135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
211, 12
               

               
Conread position:
               
216-454
               

               
Cow position:
               
chrX:35681130-35681362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 73
               

               
Conread position:
               
216-455
               

               
Cow position:
               
chrX:8899809-8900048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 195
               

               
Conread position:
               
216-455
               

               
Cow position:
               
chrX:12249590-12249826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
12, 61
               

               
Conread position:
               
216-455
               

               
Cow position:
               
chrX:45967947-45968169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
216-456
               

               
Cow position:
               
chrX:7508924-7509165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
62, 46
               

               
Conread position:
               
216-456
               

               
Cow position:
               
chrX:20582815-20583044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
62, 75
               

               
Conread position:
               
216-457
               

               
Cow position:
               
chrX:10107190-10106942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 31
               

               
Conread position:
               
216-457
               

               
Cow position:
               
chrX:14924785-14925024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 35
               

               
Conread position:
               
216-457
               

               
Cow position:
               
chrX:30963087-30962855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
216-457
               

               
Cow position:
               
chrX:34565082-34565309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
173, 21
               

               
Conread position:
               
216-457
               

               
Cow position:
               
chrX:41238578-41238331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
62, 14
               

               
Conread position:
               
216-458
               

               
Cow position:
               
chrX:11844456-11844225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
132, 13
               

               
Conread position:
               
216-458
               

               
Cow position:
               
chrX:12115823-12116071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
216-458
               

               
Cow position:
               
chrX:17497881-17498109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
63, 78
               

               
Conread position:
               
216-458
               

               
Cow position:
               
chrX:24105411-24105648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-458
               

               
Cow position:
               
chrX:36975734-36975976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-458
               

               
Cow position:
               
chrX:37843505-37843742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
216-458
               

               
Cow position:
               
chrX:40647763-40648010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-458
               

               
Cow position:
               
chrX:40826962-40826727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
116, 56
               

               
Conread position:
               
216-458
               

               
Cow position:
               
chrX:45412870-45412637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:754743-754988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
62, 105
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:3653548-3653786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:4044065-4043838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:7178694-7178922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
206, 12
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:10306455-10306700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
62, 94
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:11746627-11746871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
56, 12
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:15147401-15147168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:17231519-17231760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
62, 98
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:20376752-20376996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
156, 52
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:20887859-20887614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:21642693-21642457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:26440995-26440758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 102
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:27516317-27516555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 79
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:29289361-29289603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 150
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:30421154-30420915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:31949146-31948910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
62, 88
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:34754407-34754167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
62, 168
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:35542676-35542920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 129
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:38102659-38102418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 12
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:38935066-38935306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
62, 152
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:40567384-40567623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 105
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:44054586-44054827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
62, 77
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:45015370-45015601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
13, 63
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:45113413-45113642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:45501933-45502170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
62, 136
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:47211065-47210818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 170
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:47873556-47873311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
62, 44
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:48010379-48010629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chrX:48328602-48328358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
216-460
               

               
Cow position:
               
chrX:2467664-2467910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
62, 188
               

               
Conread position:
               
216-460
               

               
Cow position:
               
chrX:23497878-23497641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
216-460
               

               
Cow position:
               
chrX:23564012-23563765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 208
               

               
Conread position:
               
216-462
               

               
Cow position:
               
chrX:6413831-6414075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
62, 51
               

               
Conread position:
               
216-462
               

               
Cow position:
               
chrX:20709856-20710103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 129
               

               
Conread position:
               
216-462
               

               
Cow position:
               
chrX:25232375-25232622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
62, 86
               

               
Conread position:
               
216-462
               

               
Cow position:
               
chrX:40269261-40269519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
45, 137
               

               
Conread position:
               
216-463
               

               
Cow position:
               
chrX:22074585-22074825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-463
               

               
Cow position:
               
chrX:41198889-41199136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
57, 87
               

               
Conread position:
               
216-463
               

               
Cow position:
               
chrX:41884633-41884383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 129
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chrX:619223-618972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 129
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chrX:1503124-1503369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
60, 12
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chrX:9855085-9855328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 167
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chrX:9953926-9954169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 167
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chrX:10412201-10411956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 21
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chrX:11581719-11581963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
62, 108
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chrX:14900936-14900700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
63, 12
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chrX:16790052-16789825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chrX:20801564-20801799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chrX:22624266-22624506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
57, 43
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chrX:23514233-23513985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 32
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chrX:28845631-28845863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
201, 13
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chrX:31489297-31489550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
62, 27
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chrX:35268675-35268895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
62, 38
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chrX:35413417-35413648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chrX:37048796-37048551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
17, 137
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chrX:37119384-37119626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
173, 61
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chrX:37574641-37574870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chrX:39558563-39558318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 79
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chrX:41743698-41743944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chrX:42585284-42585048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
64, 52
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chrX:42874763-42875013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chrX:43527288-43527538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chrX:44192658-44192417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
157, 45
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chrX:47144872-47145115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
59, 136
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chrX:47379682-47379437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
62, 71
               

               
Conread position:
               
216-464
               

               
Cow position:
               
chrX:48243667-48243436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
173, 56
               

               
Conread position:
               
216-465
               

               
Cow position:
               
chrX:19690003-19690252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-465
               

               
Cow position:
               
chrX:22812847-22813099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
216-465
               

               
Cow position:
               
chrX:40557891-40557648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
62, 71
               

               
Conread position:
               
216-465
               

               
Cow position:
               
chrX:47054743-47054490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
216-466
               

               
Cow position:
               
chrX:13265835-13265591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
62, 79
               

               
Conread position:
               
216-476
               

               
Cow position:
               
chrX:21626166-21625905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
62, 159
               

               
Conread position:
               
216-476
               

               
Cow position:
               
chrX:23583343-23583604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
62, 156
               

               
Conread position:
               
216-477
               

               
Cow position:
               
chrX:15996939-15997207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
216-477
               

               
Cow position:
               
chrX:29509659-29509397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 76
               

               
Conread position:
               
216-478
               

               
Cow position:
               
chrX:41673888-41674149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 215
               

               
Conread position:
               
216-479
               

               
Cow position:
               
chrX:8797033-8797302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 17
               

               
Conread position:
               
216-479
               

               
Cow position:
               
chrX:48236596-48236861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 129
               

               
Conread position:
               
216-480
               

               
Cow position:
               
chrX:151686-151952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
216-482
               

               
Cow position:
               
chrX:15814882-15815133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
257, 62
               

               
Conread position:
               
216-482
               

               
Cow position:
               
chrX:21664938-21664670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 17
               

               
Conread position:
               
216-489
               

               
Cow position:
               
chrX:11856214-11856487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 28
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chrX:1810376-1810101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chrX:5638384-5638110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 12
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chrX:5872098-5872376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 108
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chrX:7646043-7646310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
14, 64
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chrX:7718638-7718908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 112
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chrX:9360668-9360946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
134, 141
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chrX:9635396-9635131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chrX:11082828-11082563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chrX:11589807-11589529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 64
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chrX:11633463-11633741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chrX:11717995-11717724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 14
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chrX:16762556-16762830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
14, 63
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chrX:17541749-17542019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chrX:26625892-26625612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 132
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chrX:27394229-27393967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chrX:31443036-31442770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 12
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chrX:32309891-32310164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
61, 12
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chrX:34502705-34502979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chrX:34543572-34543843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
62, 49
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chrX:43567724-43567978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
250, 61
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chrX:44961532-44961810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 101
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chrX:46073037-46072758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 107
               

               
Conread position:
               
216-491
               

               
Cow position:
               
chrX:46532724-46532436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
62, 12
               

               
Conread position:
               
216-493
               

               
Cow position:
               
chrX:1616263-1615982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 135
               

               
Conread position:
               
216-493
               

               
Cow position:
               
chrX:5900242-5900525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
62, 144
               

               
Conread position:
               
216-496
               

               
Cow position:
               
chrX:17662812-17662531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 135
               

               
Conread position:
               
216-499
               

               
Cow position:
               
chrX:8070915-8070632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
216-499
               

               
Cow position:
               
chrX:28013655-28013383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
62, 79
               

               
Conread position:
               
216-502
               

               
Cow position:
               
chrX:10437880-10437600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
62, 78
               

               
Conread position:
               
216-503
               

               
Cow position:
               
chrX:7425250-7425542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
62, 129
               

               
Conread position:
               
216-503
               

               
Cow position:
               
chrX:27176535-27176236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 76
               

               
Conread position:
               
216-504
               

               
Cow position:
               
chrX:42994399-42994687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 55
               

               
Conread position:
               
216-508
               

               
Cow position:
               
chrX:6278721-6278423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 288
               

               
Conread position:
               
216-508
               

               
Cow position:
               
chrX:32623367-32623646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
62, 129
               

               
Conread position:
               
217-424
               

               
Cow position:
               
chrX:45693892-45694091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
61, 99
               

               
Conread position:
               
217-431
               

               
Cow position:
               
chrX:28929628-28929833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 11
               

               
Conread position:
               
217-439
               

               
Cow position:
               
chrX:42588885-42588662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
66, 80
               

               
Conread position:
               
217-454
               

               
Cow position:
               
chrX:34411625-34411866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
16, 121
               

               
Conread position:
               
217-459
               

               
Cow position:
               
chrX:44835030-44834780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
61, 186
               

               
Conread position:
               
217-459
               

               
Cow position:
               
chrX:46771186-46770938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
217-459
               

               
Cow position:
               
chrX:47481585-47481825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 82
               

               
Conread position:
               
217-464
               

               
Cow position:
               
chrX:7161858-7162089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
221, 20
               

               
Conread position:
               
217-464
               

               
Cow position:
               
chrX:27432133-27431888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 129
               

               
Conread position:
               
217-464
               

               
Cow position:
               
chrX:32128194-32127962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
134, 11
               

               
Conread position:
               
217-490
               

               
Cow position:
               
chrX:20697822-20697551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 76
               

               
Conread position:
               
217-491
               

               
Cow position:
               
chrX:41122858-41123118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
61, 11
               

               
Conread position:
               
218-353
               

               
Cow position:
               
chrX:8492971-8492833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
218-359
               

               
Cow position:
               
chrX:21795283-21795420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 10
               

               
Conread position:
               
218-385
               

               
Cow position:
               
chrX:42499242-42499079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
218-409
               

               
Cow position:
               
chrX:4942963-4942782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
218-420
               

               
Cow position:
               
chrX:48684436-48684239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
218-430
               

               
Cow position:
               
chrX:40183563-40183349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
60, 205
               

               
Conread position:
               
218-432
               

               
Cow position:
               
chrX:8682143-8681930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
152, 57
               

               
Conread position:
               
218-436
               

               
Cow position:
               
chrX:14884175-14883958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 127
               

               
Conread position:
               
218-436
               

               
Cow position:
               
chrX:33855446-33855233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
60, 92
               

               
Conread position:
               
218-437
               

               
Cow position:
               
chrX:2701025-2700813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 59
               

               
Conread position:
               
218-440
               

               
Cow position:
               
chrX:35288447-35288660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
186, 71
               

               
Conread position:
               
218-441
               

               
Cow position:
               
chrX:877236-877027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
60, 10
               

               
Conread position:
               
218-451
               

               
Cow position:
               
chrX:16289775-16289541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
218-456
               

               
Cow position:
               
chrX:45404047-45403803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
60, 168
               

               
Conread position:
               
218-457
               

               
Cow position:
               
chrX:48195254-48195012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
65, 74
               

               
Conread position:
               
218-459
               

               
Cow position:
               
chrX:12309602-12309361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 10
               

               
Conread position:
               
218-462
               

               
Cow position:
               
chrX:1978297-1978543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
50, 10
               

               
Conread position:
               
218-464
               

               
Cow position:
               
chrX:9252391-9252133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
129, 243
               

               
Conread position:
               
218-464
               

               
Cow position:
               
chrX:10959616-10959365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
9, 129
               

               
Conread position:
               
218-464
               

               
Cow position:
               
chrX:16416295-16416539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 21
               

               
Conread position:
               
218-491
               

               
Cow position:
               
chrX:21593070-21593346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
218-491
               

               
Cow position:
               
chrX:25816109-25815842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
213, 60
               

               
Conread position:
               
218-507
               

               
Cow position:
               
chrX:878584-878306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
61, 10
               

               
Conread position:
               
219-414
               

               
Cow position:
               
chrX:33827234-33827038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
46, 58
               

               
Conread position:
               
219-431
               

               
Cow position:
               
chrX:10373095-10373311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
5, 135
               

               
Conread position:
               
219-439
               

               
Cow position:
               
chrX:17271501-17271281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
59, 126
               

               
Conread position:
               
219-440
               

               
Cow position:
               
chrX:6675137-6674915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
57, 74
               

               
Conread position:
               
219-440
               

               
Cow position:
               
chrX:47967387-47967606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
60, 87
               

               
Conread position:
               
219-450
               

               
Cow position:
               
chrX:3130369-3130588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
219-458
               

               
Cow position:
               
chrX:27174782-27175027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
14, 74
               

               
Conread position:
               
219-459
               

               
Cow position:
               
chrX:630520-630284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
59, 36
               

               
Conread position:
               
219-459
               

               
Cow position:
               
chrX:27509232-27508997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
59, 73
               

               
Conread position:
               
219-459
               

               
Cow position:
               
chrX:28866205-28865977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
190, 57
               

               
Conread position:
               
219-459
               

               
Cow position:
               
chrX:31260842-31260594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
59, 126
               

               
Conread position:
               
219-459
               

               
Cow position:
               
chrX:36250074-36249836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
59, 77
               

               
Conread position:
               
219-477
               

               
Cow position:
               
chrX:8039598-8039866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
59, 148
               

               
Conread position:
               
219-479
               

               
Cow position:
               
chrX:38549236-38549491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 133
               

               
Conread position:
               
219-491
               

               
Cow position:
               
chrX:28878372-28878115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
27, 71
               

               
Conread position:
               
220-357
               

               
Cow position:
               
chrX:10916543-10916671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
220-396
               

               
Cow position:
               
chrX:16324175-16324003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
220-430
               

               
Cow position:
               
chrX:27446477-27446691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
59, 99
               

               
Conread position:
               
220-436
               

               
Cow position:
               
chrX:20151639-20151851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
220-436
               

               
Cow position:
               
chrX:38227301-38227092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
131, 57
               

               
Conread position:
               
220-438
               

               
Cow position:
               
chrX:29542430-29542216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
220-441
               

               
Cow position:
               
chrX:13191755-13191547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
220-441
               

               
Cow position:
               
chrX:13245380-13245601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
47, 61
               

               
Conread position:
               
220-445
               

               
Cow position:
               
chrX:8917642-8917852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 72
               

               
Conread position:
               
220-464
               

               
Cow position:
               
chrX:34401786-34402030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 75
               

               
Conread position:
               
220-464
               

               
Cow position:
               
chrX:45993001-45993256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
28, 119
               

               
Conread position:
               
220-479
               

               
Cow position:
               
chrX:841947-842203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
220-479
               

               
Cow position:
               
chrX:6690459-6690214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
60, 72
               

               
Conread position:
               
220-485
               

               
Cow position:
               
chrX:5017619-5017358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
220-491
               

               
Cow position:
               
chrX:3579735-3580003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 12
               

               
Conread position:
               
220-491
               

               
Cow position:
               
chrX:8730868-8731149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
58, 253
               

               
Conread position:
               
221-408
               

               
Cow position:
               
chrX:46430068-46429887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
57, 71
               

               
Conread position:
               
221-410
               

               
Cow position:
               
chrX:45658283-45658104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
39, 72
               

               
Conread position:
               
221-418
               

               
Cow position:
               
chrX:44063927-44063737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
56, 71
               

               
Conread position:
               
221-464
               

               
Cow position:
               
chrX:7695549-7695781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
165, 57
               

               
Conread position:
               
221-464
               

               
Cow position:
               
chrX:11073399-11073161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 71
               

               
Conread position:
               
221-464
               

               
Cow position:
               
chrX:14973945-14973711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
43, 65
               

               
Conread position:
               
221-474
               

               
Cow position:
               
chrX:29876277-29876033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
55, 71
               

               
Conread position:
               
222-407
               

               
Cow position:
               
chrX:46984706-46984525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
56, 94
               

               
Conread position:
               
222-437
               

               
Cow position:
               
chrX:47248995-47248783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
8, 110
               

               
Conread position:
               
222-440
               

               
Cow position:
               
chrX:45845886-45846103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
56, 123
               

               
Conread position:
               
222-454
               

               
Cow position:
               
chrX:47453917-47454153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
54, 94
               

               
Conread position:
               
222-458
               

               
Cow position:
               
chrX:9425951-9425719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 94
               

               
Conread position:
               
222-459
               

               
Cow position:
               
chrX:6234658-6234425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
222-459
               

               
Cow position:
               
chrX:8925496-8925724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
222-459
               

               
Cow position:
               
chrX:15139753-15139522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 17
               

               
Conread position:
               
222-464
               

               
Cow position:
               
chrX:18695129-18694897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 75
               

               
Conread position:
               
222-477
               

               
Cow position:
               
chrX:28836110-28835858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
56, 21
               

               
Conread position:
               
222-479
               

               
Cow position:
               
chrX:40035655-40035396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
9, 97
               

               
Conread position:
               
222-491
               

               
Cow position:
               
chrX:28632690-28632426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
223-358
               

               
Cow position:
               
chrX:38113979-38114115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
223-432
               

               
Cow position:
               
chrX:38936492-38936694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
55, 71
               

               
Conread position:
               
223-436
               

               
Cow position:
               
chrX:9161379-9161587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
201, 54
               

               
Conread position:
               
223-438
               

               
Cow position:
               
chrX:2300725-2300927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
205, 54
               

               
Conread position:
               
223-440
               

               
Cow position:
               
chrX:38852988-38853200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
55, 74
               

               
Conread position:
               
223-440
               

               
Cow position:
               
chrX:39701018-39701227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 127
               

               
Conread position:
               
223-441
               

               
Cow position:
               
chrX:7497035-7497246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
55, 71
               

               
Conread position:
               
223-448
               

               
Cow position:
               
chrX:40540351-40540129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
55, 16
               

               
Conread position:
               
223-458
               

               
Cow position:
               
chrX:36778199-36778432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 182
               

               
Conread position:
               
223-466
               

               
Cow position:
               
chrX:488281-488526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
55, 71
               

               
Conread position:
               
223-508
               

               
Cow position:
               
chrX:42171508-42171219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 128
               

               
Conread position:
               
224-380
               

               
Cow position:
               
chrX:46672814-46672659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
15, 68
               

               
Conread position:
               
224-419
               

               
Cow position:
               
chrX:35273144-35273339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
27, 122
               

               
Conread position:
               
224-424
               

               
Cow position:
               
chrX:2029182-2029381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
54, 141
               

               
Conread position:
               
224-433
               

               
Cow position:
               
chrX:4826035-4825828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
54, 68
               

               
Conread position:
               
224-438
               

               
Cow position:
               
chrX:46315588-46315374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
55, 129
               

               
Conread position:
               
224-464
               

               
Cow position:
               
chrX:26285772-26286011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 68
               

               
Conread position:
               
224-464
               

               
Cow position:
               
chrX:26876089-26875851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
224-491
               

               
Cow position:
               
chrX:10831704-10831431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 129
               

               
Conread position:
               
224-491
               

               
Cow position:
               
chrX:11455260-11454983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
34, 9
               

               
Conread position:
               
224-491
               

               
Cow position:
               
chrX:32420011-32420271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
54, 70
               

               
Conread position:
               
225-358
               

               
Cow position:
               
chrX:6607213-6607346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 120
               

               
Conread position:
               
225-394
               

               
Cow position:
               
chrX:38642051-38642221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
53, 120
               

               
Conread position:
               
225-397
               

               
Cow position:
               
chrX:16996300-16996464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
53, 67
               

               
Conread position:
               
225-440
               

               
Cow position:
               
chrX:29032208-29032414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
53, 70
               

               
Conread position:
               
225-441
               

               
Cow position:
               
chrX:9227189-9226971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
53, 128
               

               
Conread position:
               
225-459
               

               
Cow position:
               
chrX:44873758-44873532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 56
               

               
Conread position:
               
225-459
               

               
Cow position:
               
chrX:46587611-46587847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 79
               

               
Conread position:
               
225-464
               

               
Cow position:
               
chrX:41526730-41526492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
217, 119
               

               
Conread position:
               
225-481
               

               
Cow position:
               
chrX:31729249-31729490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
23, 54
               

               
Conread position:
               
226-393
               

               
Cow position:
               
chrX:29770384-29770215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
226-433
               

               
Cow position:
               
chrX:10302133-10302335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
52, 68
               

               
Conread position:
               
226-483
               

               
Cow position:
               
chrX:24200984-24201236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 24
               

               
Conread position:
               
228-439
               

               
Cow position:
               
chrX:31340501-31340713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
50, 117
               

               
Conread position:
               
228-458
               

               
Cow position:
               
chrX:29545083-29544853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
147, 50
               

               
Conread position:
               
228-464
               

               
Cow position:
               
chrX:17908487-17908258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 64
               

               
Conread position:
               
229-440
               

               
Cow position:
               
chrX:280928-281130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
203, 48
               

               
Conread position:
               
229-489
               

               
Cow position:
               
chrX:1176185-1175925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
49, 116
               

               
Conread position:
               
231-464
               

               
Cow position:
               
chrX:4091447-4091670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
64, 34
               

               
Conread position:
               
231-491
               

               
Cow position:
               
chrX:46433283-46433550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
48, 27
               

               
Conread position:
               
232-430
               

               
Cow position:
               
chrX:45148975-45149173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
46, 190
               

               
Conread position:
               
232-459
               

               
Cow position:
               
chrX:47303079-47302852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
46, 140
               

               
Conread position:
               
232-464
               

               
Cow position:
               
chrX:30833045-30832822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 84
               

               
Conread position:
               
232-491
               

               
Cow position:
               
chrX:1499470-1499724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 65
               

               
Conread position:
               
232-508
               

               
Cow position:
               
chrX:43780052-43779772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 212
               

               
Conread position:
               
233-459
               

               
Cow position:
               
chrX:47301102-47300878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 59
               

               
Conread position:
               
233-464
               

               
Cow position:
               
chrX:38218508-38218744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
13, 113
               

               
Conread position:
               
233-491
               

               
Cow position:
               
chrX:161222-161471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
14, 46
               

               
Conread position:
               
234-402
               

               
Cow position:
               
chrX:10252379-10252214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
234-457
               

               
Cow position:
               
chrX:37781315-37781086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
44, 120
               

               
Conread position:
               
234-459
               

               
Cow position:
               
chrX:10394293-10394079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
111, 43
               

               
Conread position:
               
234-460
               

               
Cow position:
               
chrX:40809489-40809719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
45, 57
               

               
Conread position:
               
234-464
               

               
Cow position:
               
chrX:34270209-34270432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
195, 44
               

               
Conread position:
               
234-464
               

               
Cow position:
               
chrX:36355925-36356142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
234-482
               

               
Cow position:
               
chrX:36961438-36961687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 199
               

               
Conread position:
               
237-457
               

               
Cow position:
               
chrX:47484466-47484241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
238-459
               

               
Cow position:
               
chrX:33000710-33000930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
40, 88
               

               
Conread position:
               
238-464
               

               
Cow position:
               
chrX:4515474-4515715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
50, 39
               

               
Conread position:
               
239-430
               

               
Cow position:
               
chrX:18216084-18216281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
239-440
               

               
Cow position:
               
chrX:37540932-37541129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 71
               

               
Conread position:
               
239-450
               

               
Cow position:
               
chrX:8991695-8991901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
39, 55
               

               
Conread position:
               
239-459
               

               
Cow position:
               
chrX:45874806-45875023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
39, 52
               

               
Conread position:
               
239-464
               

               
Cow position:
               
chrX:8869601-8869372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
37, 109
               

               
Conread position:
               
240-491
               

               
Cow position:
               
chrX:43730406-43730165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
38, 78
               

               
Conread position:
               
241-464
               

               
Cow position:
               
chrX:31311835-31312059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 104
               

               
Conread position:
               
241-478
               

               
Cow position:
               
chrX:23785463-23785692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
37, 175
               

               
Conread position:
               
242-409
               

               
Cow position:
               
chrX:24149450-24149615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
36, 52
               

               
Conread position:
               
242-438
               

               
Cow position:
               
chrX:1505523-1505712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
242-459
               

               
Cow position:
               
chrX:18999699-18999913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
36, 52
               

               
Conread position:
               
243-459
               

               
Cow position:
               
chrX:2147146-2147371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
243-464
               

               
Cow position:
               
chrX:42235722-42235494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
37, 111
               

               
Conread position:
               
245-444
               

               
Cow position:
               
chrX:31256681-31256877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 47
               

               
Conread position:
               
245-464
               

               
Cow position:
               
chrX:48035241-48035455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
35, 109
               

               
Conread position:
               
246-405
               

               
Cow position:
               
chrX:35383205-35383047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
32, 99
               

               
Conread position:
               
249-464
               

               
Cow position:
               
chrX:14003828-14003616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
11, 103
               

               
Conread position:
               
249-508
               

               
Cow position:
               
chrX:32820847-32821103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 9
               

               
Conread position:
               
250-499
               

               
Cow position:
               
chrX:7336645-7336891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
23, 44
               

               
Conread position:
               
252-462
               

               
Cow position:
               
chrX:13785537-13785332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
26, 37
               

               
Conread position:
               
252-464
               

               
Cow position:
               
chrX:45098932-45099158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 71
               

               
Conread position:
               
253-440
               

               
Cow position:
               
chrX:16514443-16514260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
25, 41
               

               
Conread position:
               
253-459
               

               
Cow position:
               
chrX:24288111-24287906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
25, 103
               

               
Conread position:
               
253-459
               

               
Cow position:
               
chrX:36060973-36061185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
26, 130
               

               
Conread position:
               
253-464
               

               
Cow position:
               
chrX:31252239-31252447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
254-426
               

               
Cow position:
               
chrX:48287630-48287458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 48
               

               
Conread position:
               
254-464
               

               
Cow position:
               
chrX:47186498-47186294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
24, 38
               

               
Conread position:
               
254-491
               

               
Cow position:
               
chrX:29680438-29680202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
255-459
               

               
Cow position:
               
chrX:47166061-47165861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
94, 22
               

               
Conread position:
               
256-412
               

               
Cow position:
               
chrX:22866756-22866599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
256-445
               

               
Cow position:
               
chrX:18897831-18897638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
256-445
               

               
Cow position:
               
chrX:23299779-23299969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
256-451
               

               
Cow position:
               
chrX:2933544-2933740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
22, 64
               

               
Conread position:
               
256-451
               

               
Cow position:
               
chrX:23341143-23340952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
22, 125
               

               
Conread position:
               
256-459
               

               
Cow position:
               
chrX:41488340-41488137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 154
               

               
Conread position:
               
256-461
               

               
Cow position:
               
chrX:31449797-31449592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 125
               

               
Conread position:
               
256-464
               

               
Cow position:
               
chrX:169701-169515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 36
               

               
Conread position:
               
256-464
               

               
Cow position:
               
chrX:29563546-29563339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
22, 36
               

               
Conread position:
               
256-501
               

               
Cow position:
               
chrX:18485619-18485862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 112
               

               
Conread position:
               
257-404
               

               
Cow position:
               
chrX:27145449-27145592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
258-459
               

               
Cow position:
               
chrX:22921140-22921346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
90, 158
               

               
Conread position:
               
258-459
               

               
Cow position:
               
chrX:37750427-37750229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 87
               

               
Conread position:
               
259-413
               

               
Cow position:
               
chrX:30823344-30823499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
259-439
               

               
Cow position:
               
chrX:9096494-9096672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
19, 59
               

               
Conread position:
               
259-451
               

               
Cow position:
               
chrX:14018979-14019172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
259-458
               

               
Cow position:
               
chrX:6407376-6407570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
19, 58
               

               
Conread position:
               
259-459
               

               
Cow position:
               
chrX:35885902-35885702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
20, 35
               

               
Conread position:
               
259-464
               

               
Cow position:
               
chrX:22387420-22387216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
19, 172
               

               
Conread position:
               
260-458
               

               
Cow position:
               
chrX:4279286-4279094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 104
               

               
Conread position:
               
260-459
               

               
Cow position:
               
chrX:30263080-30263277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
5, 35
               

               
Conread position:
               
260-482
               

               
Cow position:
               
chrX:4398954-4399174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
18, 85
               

               
Conread position:
               
261-407
               

               
Cow position:
               
chrX:25208017-25207869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
262-393
               

               
Cow position:
               
chrX:41271377-41271249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
265-450
               

               
Cow position:
               
chrX:10128838-10129024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
265-458
               

               
Cow position:
               
chrX:9770851-9770652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
16, 12
               

               
Conread position:
               
266-452
               

               
Cow position:
               
chrX:30134339-30134152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
266-459
               

               
Cow position:
               
chrX:10278649-10278836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
78, 17
               

               
Conread position:
               
266-464
               

               
Cow position:
               
chrX:41992207-41992016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
12, 21
               

               
Conread position:
               
267-459
               

               
Cow position:
               
chrX:27227962-27228151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
84, 10
               

               
Conread position:
               
268-491
               

               
Cow position:
               
chrX:41068564-41068784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
10, 21
               

               
Conread position:
               
269-459
               

               
Cow position:
               
chrX:27301701-27301895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 153
               

               
Conread position:
               
276-464
               

               
Cow position:
               
chrX:48385518-48385332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
69, 156
               

               
Conread position:
               
277-445
               

               
Cow position:
               
chrX:18515247-18515415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
282-413
               

               
Cow position:
               
chrX:45375251-45375120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
282-459
               

               
Cow position:
               
chrX:8917244-8917419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
282-464
               

               
Cow position:
               
chrX:5118654-5118472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
140, 62
               

               
Conread position:
               
282-465
               

               
Cow position:
               
chrX:11673681-11673859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
150, 12
               

               
Conread position:
               
282-489
               

               
Cow position:
               
chrX:35822190-35822401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
140, 106
               

               
Conread position:
               
282-508
               

               
Cow position:
               
chrX:12405539-12405306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
64, 219
               

               
Conread position:
               
285-464
               

               
Cow position:
               
chrX:42759833-42760017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 103
               

               
Conread position:
               
287-452
               

               
Cow position:
               
chrX:525554-525718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
287-508
               

               
Cow position:
               
chrX:9365822-9365601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
8, 31
               

               
Conread position:
               
291-491
               

               
Cow position:
               
chrX:27685104-27685307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
29, 24
               

               
Conread position:
               
292-491
               

               
Cow position:
               
chrX:34315388-34315578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
135, 23
               

               
Conread position:
               
293-491
               

               
Cow position:
               
chrX:41027014-41027218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
8, 58
               

               
Conread position:
               
294-459
               

               
Cow position:
               
chrX:45875250-45875417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
296-427
               

               
Cow position:
               
chrX:36723229-36723098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
19, 24
               

               
Conread position:
               
296-458
               

               
Cow position:
               
chrX:29723603-29723764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
119, 139
               

               
Conread position:
               
296-459
               

               
Cow position:
               
chrX:32215059-32215223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
56, 101
               

               
Conread position:
               
296-461
               

               
Cow position:
               
chrX:11614561-11614726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
19, 23
               

               
Conread position:
               
296-462
               

               
Cow position:
               
chrX:616400-616231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
149, 54
               

               
Conread position:
               
296-467
               

               
Cow position:
               
chrX:21566264-21566440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
296-491
               

               
Cow position:
               
chrX:18204601-18204408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
58, 125
               

               
Conread position:
               
297-412
               

               
Cow position:
               
chrX:41764504-41764623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
297-491
               

               
Cow position:
               
chrX:11085194-11085004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
169, 112
               

               
Conread position:
               
297-491
               

               
Cow position:
               
chrX:42873255-42873444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
46, 31
               

               
Conread position:
               
298-431
               

               
Cow position:
               
chrX:23666986-23667121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
298-439
               

               
Cow position:
               
chrX:37955697-37955836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
137, 52
               

               
Conread position:
               
298-458
               

               
Cow position:
               
chrX:27269834-27269991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
127, 58
               

               
Conread position:
               
298-459
               

               
Cow position:
               
chrX:36393483-36393314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
298-459
               

               
Cow position:
               
chrX:37986097-37986256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
130, 53
               

               
Conread position:
               
298-491
               

               
Cow position:
               
chrX:7710679-7710480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
299-458
               

               
Cow position:
               
chrX:27415932-27416082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
299-459
               

               
Cow position:
               
chrX:5919361-5919517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
129, 45
               

               
Conread position:
               
299-459
               

               
Cow position:
               
chrX:39415503-39415345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
10, 52
               

               
Conread position:
               
300-462
               

               
Cow position:
               
chrX:27450133-27449968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
72, 44
               

               
Conread position:
               
301-458
               

               
Cow position:
               
chrX:35969218-35969062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
93, 12
               

               
Conread position:
               
304-508
               

               
Cow position:
               
chrX:6260289-6260074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 189
               

               
Conread position:
               
305-464
               

               
Cow position:
               
chrX:38728608-38728764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
81, 75
               

               
Conread position:
               
308-493
               

               
Cow position:
               
chrX:19003174-19003356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
158, 44
               

               
Conread position:
               
310-455
               

               
Cow position:
               
chrX:27946183-27946033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
311-491
               

               
Cow position:
               
chrX:20790798-20790972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
317-464
               

               
Cow position:
               
chrX:23562518-23562662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
318-491
               

               
Cow position:
               
chrX:29194118-29194289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
148, 32
               

               
Conread position:
               
319-464
               

               
Cow position:
               
chrX:5679681-5679539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
322-439
               

               
Cow position:
               
chrX:5680047-5679931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
101, 62
               

               
Conread position:
               
322-459
               

               
Cow position:
               
chrX:4403202-4403336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
322-480
               

               
Cow position:
               
chrX:27119587-27119744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
100, 62
               

               
Conread position:
               
322-491
               

               
Cow position:
               
chrX:38654542-38654371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
67, 28
               

               
Conread position:
               
323-465
               

               
Cow position:
               
chrX:17949601-17949458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
25, 100
               

               
Conread position:
               
323-469
               

               
Cow position:
               
chrX:10079560-10079412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
105, 27
               

               
Conread position:
               
325-459
               

               
Cow position:
               
chrX:47209236-47209371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
326-459
               

               
Cow position:
               
chrX:47657276-47657411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
94, 51
               

               
Conread position:
               
327-464
               

               
Cow position:
               
chrX:35848454-35848594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
101, 56
               

               
Conread position:
               
329-450
               

               
Cow position:
               
chrX:18510152-18510032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
329-479
               

               
Cow position:
               
chrX:29488107-29487962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
132, 23
               

               
Conread position:
               
330-464
               

               
Cow position:
               
chrX:48044618-48044484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 53
               

               
Conread position:
               
332-476
               

               
Cow position:
               
chrX:16348672-16348521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
14, 52
               

               
Conread position:
               
333-479
               

               
Cow position:
               
chrX:21327802-21327957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
14, 52
               

               
Conread position:
               
335-464
               

               
Cow position:
               
chrX:10516157-10516283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
336-478
               

               
Cow position:
               
chrX:40283027-40283170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
338-459
               

               
Cow position:
               
chrX:12095870-12095749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
100, 81
               

               
Conread position:
               
338-464
               

               
Cow position:
               
chrX:20168461-20168588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
338-497
               

               
Cow position:
               
chrX:29549644-29549480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
343-459
               

               
Cow position:
               
chrX:25283106-25282990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
344-491
               

               
Cow position:
               
chrX:1572228-1572080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
347-464
               

               
Cow position:
               
chrX:20882025-20881909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
71, 49
               

               
Conread position:
               
347-464
               

               
Cow position:
               
chrX:40680523-40680644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
355-491
               

               
Cow position:
               
chrX:39220000-39220138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
70, 35
               

               
Conread position:
               
377-508
               

               
Cow position:
               
chrX:27511369-27511503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 120
               
Show alignments to all cow chromosomes.