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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8060L10.5
        

               
Conread position:
               
183-622
               

               
Cow position:
               
chr15:19186796-19186355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
38, 7
               

               
Conread position:
               
200-626
               

               
Cow position:
               
chr15:20081623-20082024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
167, 17
               

               
Conread position:
               
217-624
               

               
Cow position:
               
chr15:53163875-53164284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
124, 83
               

               
Conread position:
               
217-626
               

               
Cow position:
               
chr15:45560-45152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
58, 9
               

               
Conread position:
               
218-439
               

               
Cow position:
               
chr15:37483716-37483485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
55, 11
               

               
Conread position:
               
220-613
               

               
Cow position:
               
chr15:21822060-21821670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
55, 95
               

               
Conread position:
               
220-626
               

               
Cow position:
               
chr15:25208892-25208501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 95
               

               
Conread position:
               
222-613
               

               
Cow position:
               
chr15:43626332-43626721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
27, 92
               

               
Conread position:
               
223-433
               

               
Cow position:
               
chr15:8623984-8624199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
51, 39
               

               
Conread position:
               
223-438
               

               
Cow position:
               
chr15:12357475-12357693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
21, 67
               

               
Conread position:
               
223-491
               

               
Cow position:
               
chr15:15154170-15154428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
223-559
               

               
Cow position:
               
chr15:8665738-8665395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
21, 92
               

               
Conread position:
               
223-590
               

               
Cow position:
               
chr15:9879510-9879165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
169, 110
               

               
Conread position:
               
223-601
               

               
Cow position:
               
chr15:286339-286720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
14, 92
               

               
Conread position:
               
223-614
               

               
Cow position:
               
chr15:4295632-4296020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
44, 16
               

               
Conread position:
               
223-626
               

               
Cow position:
               
chr15:42789301-42788886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 9
               

               
Conread position:
               
223-626
               

               
Cow position:
               
chr15:45584589-45584989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
26, 117
               

               
Conread position:
               
223-629
               

               
Cow position:
               
chr15:275515-275914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
224-367
               

               
Cow position:
               
chr15:41361308-41361172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
224-418
               

               
Cow position:
               
chr15:28788058-28788272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
224-559
               

               
Cow position:
               
chr15:2141447-2141105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 14
               

               
Conread position:
               
224-624
               

               
Cow position:
               
chr15:20391406-20391016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 87
               

               
Conread position:
               
225-481
               

               
Cow position:
               
chr15:23719630-23719365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
49, 7
               

               
Conread position:
               
225-622
               

               
Cow position:
               
chr15:47844214-47843847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
43, 6
               

               
Conread position:
               
226-449
               

               
Cow position:
               
chr15:34223739-34223953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
14, 82
               

               
Conread position:
               
226-585
               

               
Cow position:
               
chr15:49273833-49274177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 64
               

               
Conread position:
               
227-470
               

               
Cow position:
               
chr15:44671465-44671227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
76, 15
               

               
Conread position:
               
227-494
               

               
Cow position:
               
chr15:31637169-31637433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
46, 114
               

               
Conread position:
               
227-570
               

               
Cow position:
               
chr15:1857599-1857935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 67
               

               
Conread position:
               
228-498
               

               
Cow position:
               
chr15:14281410-14281685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
228-611
               

               
Cow position:
               
chr15:34207325-34206936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
47, 29
               

               
Conread position:
               
228-622
               

               
Cow position:
               
chr15:23275409-23275798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 31
               

               
Conread position:
               
228-626
               

               
Cow position:
               
chr15:225931-225540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
8, 108
               

               
Conread position:
               
229-420
               

               
Cow position:
               
chr15:26849656-26849479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
45, 81
               

               
Conread position:
               
229-449
               

               
Cow position:
               
chr15:8641985-8642204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
44, 10
               

               
Conread position:
               
229-473
               

               
Cow position:
               
chr15:26442087-26442326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
13, 84
               

               
Conread position:
               
229-559
               

               
Cow position:
               
chr15:23114705-23115036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 85
               

               
Conread position:
               
229-569
               

               
Cow position:
               
chr15:16928213-16927893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
305, 30
               

               
Conread position:
               
229-588
               

               
Cow position:
               
chr15:36353542-36353897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
34, 86
               

               
Conread position:
               
229-600
               

               
Cow position:
               
chr15:49257711-49258103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
229-607
               

               
Cow position:
               
chr15:5726192-5726573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
124, 18
               

               
Conread position:
               
229-610
               

               
Cow position:
               
chr15:33976837-33976437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 49
               

               
Conread position:
               
229-622
               

               
Cow position:
               
chr15:26896825-26896451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
7, 87
               

               
Conread position:
               
229-626
               

               
Cow position:
               
chr15:11658707-11658301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 108
               

               
Conread position:
               
229-626
               

               
Cow position:
               
chr15:36435080-36435474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
46, 12
               

               
Conread position:
               
229-631
               

               
Cow position:
               
chr15:12304515-12304910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 88
               

               
Conread position:
               
230-408
               

               
Cow position:
               
chr15:27656976-27657151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 81
               

               
Conread position:
               
230-557
               

               
Cow position:
               
chr15:13432359-13432686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
44, 90
               

               
Conread position:
               
230-624
               

               
Cow position:
               
chr15:17353783-17353388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
43, 13
               

               
Conread position:
               
231-521
               

               
Cow position:
               
chr15:36952321-36952043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
41, 82
               

               
Conread position:
               
231-571
               

               
Cow position:
               
chr15:22939446-22939116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
299, 39
               

               
Conread position:
               
232-435
               

               
Cow position:
               
chr15:46059232-46059435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 79
               

               
Conread position:
               
232-551
               

               
Cow position:
               
chr15:52316938-52317246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
11, 47
               

               
Conread position:
               
232-571
               

               
Cow position:
               
chr15:30471100-30470761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 119
               

               
Conread position:
               
232-581
               

               
Cow position:
               
chr15:1502791-1503126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 75
               

               
Conread position:
               
232-605
               

               
Cow position:
               
chr15:17100825-17100463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
298, 40
               

               
Conread position:
               
232-607
               

               
Cow position:
               
chr15:16261208-16261562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
9, 75
               

               
Conread position:
               
232-609
               

               
Cow position:
               
chr15:17233065-17233444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
43, 79
               

               
Conread position:
               
232-615
               

               
Cow position:
               
chr15:40957457-40957834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
39, 86
               

               
Conread position:
               
232-624
               

               
Cow position:
               
chr15:17084087-17084474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
232-626
               

               
Cow position:
               
chr15:608022-608414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
119, 56
               

               
Conread position:
               
232-626
               

               
Cow position:
               
chr15:23598460-23598044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
43, 268
               

               
Conread position:
               
232-626
               

               
Cow position:
               
chr15:29604844-29604452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 250
               

               
Conread position:
               
233-450
               

               
Cow position:
               
chr15:29793323-29793105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 103
               

               
Conread position:
               
233-474
               

               
Cow position:
               
chr15:11909067-11908839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
233-528
               

               
Cow position:
               
chr15:14987875-14988153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
42, 71
               

               
Conread position:
               
233-530
               

               
Cow position:
               
chr15:36846307-36846009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
233-576
               

               
Cow position:
               
chr15:36793610-36793279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
246, 10
               

               
Conread position:
               
233-616
               

               
Cow position:
               
chr15:17762796-17763163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
273, 10
               

               
Conread position:
               
233-625
               

               
Cow position:
               
chr15:21893660-21894045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 82
               

               
Conread position:
               
233-626
               

               
Cow position:
               
chr15:7429847-7430245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
116, 10
               

               
Conread position:
               
233-626
               

               
Cow position:
               
chr15:10457148-10456745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 109
               

               
Conread position:
               
233-626
               

               
Cow position:
               
chr15:14505327-14505693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
298, 14
               

               
Conread position:
               
233-626
               

               
Cow position:
               
chr15:22871479-22871874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
233-626
               

               
Cow position:
               
chr15:36391551-36391936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
39, 75
               

               
Conread position:
               
234-452
               

               
Cow position:
               
chr15:19758927-19759151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
234-520
               

               
Cow position:
               
chr15:3695517-3695790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
15, 82
               

               
Conread position:
               
234-590
               

               
Cow position:
               
chr15:22938886-22938539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 93
               

               
Conread position:
               
234-626
               

               
Cow position:
               
chr15:1083489-1083108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
294, 72
               

               
Conread position:
               
234-626
               

               
Cow position:
               
chr15:17870411-17870028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 115
               

               
Conread position:
               
234-626
               

               
Cow position:
               
chr15:47042762-47042373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 64
               

               
Conread position:
               
235-610
               

               
Cow position:
               
chr15:20487319-20486961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
334, 49
               

               
Conread position:
               
235-629
               

               
Cow position:
               
chr15:26158718-26158346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
10, 89
               

               
Conread position:
               
236-481
               

               
Cow position:
               
chr15:21903525-21903291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
236-559
               

               
Cow position:
               
chr15:23780189-23779875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
12, 39
               

               
Conread position:
               
236-613
               

               
Cow position:
               
chr15:18671567-18671199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
12, 50
               

               
Conread position:
               
236-619
               

               
Cow position:
               
chr15:36887721-36888084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
13, 77
               

               
Conread position:
               
237-449
               

               
Cow position:
               
chr15:15992757-15992556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
237-541
               

               
Cow position:
               
chr15:31175647-31175979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 179
               

               
Conread position:
               
237-626
               

               
Cow position:
               
chr15:22532137-22532505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
238-470
               

               
Cow position:
               
chr15:19002398-19002168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
34, 69
               

               
Conread position:
               
239-412
               

               
Cow position:
               
chr15:36714145-36713962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
239-414
               

               
Cow position:
               
chr15:24124609-24124785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
36, 109
               

               
Conread position:
               
239-450
               

               
Cow position:
               
chr15:28098997-28099200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
10, 73
               

               
Conread position:
               
239-479
               

               
Cow position:
               
chr15:20950138-20950370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
31, 68
               

               
Conread position:
               
239-507
               

               
Cow position:
               
chr15:50332861-50333126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
36, 73
               

               
Conread position:
               
239-508
               

               
Cow position:
               
chr15:40835001-40835259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
33, 71
               

               
Conread position:
               
239-516
               

               
Cow position:
               
chr15:50660488-50660782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
239-528
               

               
Cow position:
               
chr15:41056323-41056041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
239-549
               

               
Cow position:
               
chr15:10442626-10442323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
13, 88
               

               
Conread position:
               
239-569
               

               
Cow position:
               
chr15:5683023-5683347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
34, 103
               

               
Conread position:
               
239-588
               

               
Cow position:
               
chr15:53716320-53716661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
35, 69
               

               
Conread position:
               
239-613
               

               
Cow position:
               
chr15:22553655-22553291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
35, 73
               

               
Conread position:
               
239-622
               

               
Cow position:
               
chr15:20459425-20459035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
45, 73
               

               
Conread position:
               
239-625
               

               
Cow position:
               
chr15:39405626-39405998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
11, 78
               

               
Conread position:
               
239-627
               

               
Cow position:
               
chr15:38883032-38883421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
203, 27
               

               
Conread position:
               
239-645
               

               
Cow position:
               
chr15:11996142-11995740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
34, 76
               

               
Conread position:
               
240-522
               

               
Cow position:
               
chr15:4694638-4694903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
210, 22
               

               
Conread position:
               
240-625
               

               
Cow position:
               
chr15:16112281-16112668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 69
               

               
Conread position:
               
242-536
               

               
Cow position:
               
chr15:29541754-29542054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
242-626
               

               
Cow position:
               
chr15:30047665-30047275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 73
               

               
Conread position:
               
243-559
               

               
Cow position:
               
chr15:31929008-31928702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
108, 35
               

               
Conread position:
               
243-559
               

               
Cow position:
               
chr15:37865250-37865562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
37, 16
               

               
Conread position:
               
243-589
               

               
Cow position:
               
chr15:14576220-14576564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
31, 68
               

               
Conread position:
               
243-622
               

               
Cow position:
               
chr15:12722974-12723351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
31, 72
               

               
Conread position:
               
243-622
               

               
Cow position:
               
chr15:48851603-48851232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 72
               

               
Conread position:
               
243-624
               

               
Cow position:
               
chr15:52482948-52482565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
98, 57
               

               
Conread position:
               
243-626
               

               
Cow position:
               
chr15:26912178-26911815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
287, 38
               

               
Conread position:
               
243-629
               

               
Cow position:
               
chr15:10335623-10336026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 173
               

               
Conread position:
               
244-626
               

               
Cow position:
               
chr15:32324317-32323941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
107, 44
               

               
Conread position:
               
244-638
               

               
Cow position:
               
chr15:52611178-52611588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 401
               

               
Conread position:
               
247-609
               

               
Cow position:
               
chr15:24994617-24994270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
24, 61
               

               
Conread position:
               
247-633
               

               
Cow position:
               
chr15:16667604-16667228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
26, 65
               

               
Conread position:
               
249-626
               

               
Cow position:
               
chr15:244678-245038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
244, 58
               

               
Conread position:
               
249-626
               

               
Cow position:
               
chr15:1330213-1329835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 79
               

               
Conread position:
               
251-464
               

               
Cow position:
               
chr15:18776873-18776649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
254-624
               

               
Cow position:
               
chr15:16476850-16476483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 136
               

               
Conread position:
               
255-526
               

               
Cow position:
               
chr15:5657719-5658001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 207
               

               
Conread position:
               
259-609
               

               
Cow position:
               
chr15:10608403-10608055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
90, 18
               

               
Conread position:
               
265-521
               

               
Cow position:
               
chr15:13395463-13395707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
208, 44
               

               
Conread position:
               
272-484
               

               
Cow position:
               
chr15:11912650-11912437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
75, 149
               

               
Conread position:
               
287-519
               

               
Cow position:
               
chr15:44237341-44237573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
31, 202
               

               
Conread position:
               
296-555
               

               
Cow position:
               
chr15:9465610-9465870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 188
               

               
Conread position:
               
299-420
               

               
Cow position:
               
chr15:1984228-1984354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
304-622
               

               
Cow position:
               
chr15:27900569-27900241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
47, 129
               

               
Conread position:
               
309-480
               

               
Cow position:
               
chr15:14261313-14261141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 122
               

               
Conread position:
               
309-554
               

               
Cow position:
               
chr15:35441132-35440884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
41, 113
               

               
Conread position:
               
311-521
               

               
Cow position:
               
chr15:25650464-25650264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
42, 106
               

               
Conread position:
               
312-427
               

               
Cow position:
               
chr15:10723175-10723059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
312-515
               

               
Cow position:
               
chr15:40594554-40594351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
127, 30
               

               
Conread position:
               
312-626
               

               
Cow position:
               
chr15:6530903-6530579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 171
               

               
Conread position:
               
312-637
               

               
Cow position:
               
chr15:41000126-40999790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
35, 116
               

               
Conread position:
               
315-527
               

               
Cow position:
               
chr15:14176546-14176337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
36, 5
               

               
Conread position:
               
317-588
               

               
Cow position:
               
chr15:29330962-29331232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
180, 25
               

               
Conread position:
               
317-626
               

               
Cow position:
               
chr15:39082168-39082465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
256, 94
               

               
Conread position:
               
319-526
               

               
Cow position:
               
chr15:26718966-26718759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
34, 94
               

               
Conread position:
               
323-624
               

               
Cow position:
               
chr15:30001653-30001952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
36, 149
               

               
Conread position:
               
325-590
               

               
Cow position:
               
chr15:915881-915615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
29, 46
               

               
Conread position:
               
325-622
               

               
Cow position:
               
chr15:44658325-44658621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 45
               

               
Conread position:
               
325-626
               

               
Cow position:
               
chr15:26573342-26573651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 35
               

               
Conread position:
               
325-632
               

               
Cow position:
               
chr15:2953172-2952859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 220
               

               
Conread position:
               
327-516
               

               
Cow position:
               
chr15:32234363-32234179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
327-521
               

               
Cow position:
               
chr15:52809618-52809426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
22, 156
               

               
Conread position:
               
327-619
               

               
Cow position:
               
chr15:46563518-46563233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
207, 20
               

               
Conread position:
               
327-626
               

               
Cow position:
               
chr15:21907900-21908201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
124, 132
               

               
Conread position:
               
327-626
               

               
Cow position:
               
chr15:33306074-33306372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
24, 123
               

               
Conread position:
               
327-626
               

               
Cow position:
               
chr15:36259639-36259337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
123, 132
               

               
Conread position:
               
329-559
               

               
Cow position:
               
chr15:14888680-14888444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
26, 34
               

               
Conread position:
               
329-578
               

               
Cow position:
               
chr15:662504-662250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 152
               

               
Conread position:
               
329-622
               

               
Cow position:
               
chr15:1297703-1298002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
24, 149
               

               
Conread position:
               
334-447
               

               
Cow position:
               
chr15:12059542-12059654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
334-613
               

               
Cow position:
               
chr15:39598211-39598497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 157
               

               
Conread position:
               
334-622
               

               
Cow position:
               
chr15:25906878-25907172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
10, 236
               

               
Conread position:
               
335-622
               

               
Cow position:
               
chr15:3700317-3700022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
16, 95
               

               
Conread position:
               
336-559
               

               
Cow position:
               
chr15:51307718-51307483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
339-518
               

               
Cow position:
               
chr15:78551-78727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
111, 38
               

               
Conread position:
               
340-520
               

               
Cow position:
               
chr15:22442299-22442117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
342-525
               

               
Cow position:
               
chr15:37284433-37284616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
142, 167
               

               
Conread position:
               
342-585
               

               
Cow position:
               
chr15:2380344-2380582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
147, 56
               

               
Conread position:
               
342-609
               

               
Cow position:
               
chr15:11559378-11559106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 149
               

               
Conread position:
               
342-634
               

               
Cow position:
               
chr15:33643067-33643362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 144
               

               
Conread position:
               
346-630
               

               
Cow position:
               
chr15:18720301-18720582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
183, 14
               

               
Conread position:
               
347-516
               

               
Cow position:
               
chr15:39090281-39090444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
347-522
               

               
Cow position:
               
chr15:40415655-40415481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
23, 135
               

               
Conread position:
               
347-607
               

               
Cow position:
               
chr15:5729925-5730189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
20, 68
               

               
Conread position:
               
347-619
               

               
Cow position:
               
chr15:16543468-16543198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
41, 141
               

               
Conread position:
               
347-626
               

               
Cow position:
               
chr15:31857576-31857856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
347-630
               

               
Cow position:
               
chr15:50322579-50322863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
183, 134
               

               
Conread position:
               
348-622
               

               
Cow position:
               
chr15:33624943-33625213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
134, 79
               

               
Conread position:
               
348-626
               

               
Cow position:
               
chr15:7192276-7191997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
104, 167
               

               
Conread position:
               
348-626
               

               
Cow position:
               
chr15:26421611-26421332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
348-626
               

               
Cow position:
               
chr15:39599433-39599704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
177, 58
               

               
Conread position:
               
348-654
               

               
Cow position:
               
chr15:21389178-21388871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
183, 68
               

               
Conread position:
               
349-626
               

               
Cow position:
               
chr15:24128018-24128294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
138, 65
               

               
Conread position:
               
349-632
               

               
Cow position:
               
chr15:44051507-44051227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
29, 10
               

               
Conread position:
               
349-639
               

               
Cow position:
               
chr15:6969976-6970262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
224, 13
               

               
Conread position:
               
350-447
               

               
Cow position:
               
chr15:24953535-24953438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
350-489
               

               
Cow position:
               
chr15:27063533-27063394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
350-527
               

               
Cow position:
               
chr15:9497512-9497337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
135, 110
               

               
Conread position:
               
350-528
               

               
Cow position:
               
chr15:16908421-16908595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
100, 109
               

               
Conread position:
               
350-529
               

               
Cow position:
               
chr15:30794968-30795148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
137, 64
               

               
Conread position:
               
350-544
               

               
Cow position:
               
chr15:21820977-21821170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
11, 21
               

               
Conread position:
               
350-550
               

               
Cow position:
               
chr15:35425821-35425626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
180, 60
               

               
Conread position:
               
350-551
               

               
Cow position:
               
chr15:41087913-41087707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
124, 64
               

               
Conread position:
               
350-557
               

               
Cow position:
               
chr15:10660567-10660357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
350-558
               

               
Cow position:
               
chr15:10563514-10563309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
135, 62
               

               
Conread position:
               
350-559
               

               
Cow position:
               
chr15:17337350-17337555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
180, 118
               

               
Conread position:
               
350-559
               

               
Cow position:
               
chr15:34284423-34284215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 126
               

               
Conread position:
               
350-559
               

               
Cow position:
               
chr15:50088968-50089174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
137, 42
               

               
Conread position:
               
350-560
               

               
Cow position:
               
chr15:48711066-48710856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
135, 65
               

               
Conread position:
               
350-569
               

               
Cow position:
               
chr15:15573847-15573624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
65, 84
               

               
Conread position:
               
350-581
               

               
Cow position:
               
chr15:43599177-43599407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
222, 128
               

               
Conread position:
               
350-585
               

               
Cow position:
               
chr15:2145150-2144905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 95
               

               
Conread position:
               
350-586
               

               
Cow position:
               
chr15:24982191-24981966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
182, 93
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:9107023-9107267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
178, 19
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:12870876-12870633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
132, 114
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:13554341-13554585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
180, 133
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr15:20422789-20422548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
128, 16
               

               
Conread position:
               
350-596
               

               
Cow position:
               
chr15:34896751-34896999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
154, 9
               

               
Conread position:
               
350-604
               

               
Cow position:
               
chr15:8354029-8354289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
350-607
               

               
Cow position:
               
chr15:5235009-5234755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
222, 71
               

               
Conread position:
               
350-607
               

               
Cow position:
               
chr15:23696919-23696662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
56, 26
               

               
Conread position:
               
350-607
               

               
Cow position:
               
chr15:30986307-30986040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
101, 109
               

               
Conread position:
               
350-609
               

               
Cow position:
               
chr15:12655928-12655661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
135, 114
               

               
Conread position:
               
350-609
               

               
Cow position:
               
chr15:27973229-27972964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
184, 124
               

               
Conread position:
               
350-614
               

               
Cow position:
               
chr15:6905065-6905317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
207, 42
               

               
Conread position:
               
350-615
               

               
Cow position:
               
chr15:26404271-26404531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
109, 68
               

               
Conread position:
               
350-616
               

               
Cow position:
               
chr15:46868726-46868455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 34
               

               
Conread position:
               
350-622
               

               
Cow position:
               
chr15:5420897-5420622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
61, 123
               

               
Conread position:
               
350-622
               

               
Cow position:
               
chr15:16822927-16823201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
181, 33
               

               
Conread position:
               
350-622
               

               
Cow position:
               
chr15:22136678-22136947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
220, 66
               

               
Conread position:
               
350-622
               

               
Cow position:
               
chr15:24967782-24968057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
131, 77
               

               
Conread position:
               
350-622
               

               
Cow position:
               
chr15:29340049-29340327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
54, 99
               

               
Conread position:
               
350-622
               

               
Cow position:
               
chr15:50302172-50302448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
101, 43
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr15:795033-794749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr15:1722862-1722586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
223, 98
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr15:1804350-1804064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 113
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr15:4093945-4093660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
180, 126
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr15:14870731-14871010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 64
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr15:16307410-16307680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 34
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr15:26903179-26903458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
111, 13
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr15:26919287-26919010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
180, 123
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr15:41125585-41125303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
31, 113
               

               
Conread position:
               
350-638
               

               
Cow position:
               
chr15:20351820-20352109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
101, 109
               

               
Conread position:
               
350-638
               

               
Cow position:
               
chr15:47843263-47842983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
136, 162
               

               
Conread position:
               
351-452
               

               
Cow position:
               
chr15:48326242-48326141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
351-514
               

               
Cow position:
               
chr15:28038770-28038927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
351-559
               

               
Cow position:
               
chr15:39326528-39326318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
44, 110
               

               
Conread position:
               
351-569
               

               
Cow position:
               
chr15:35112894-35112675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 130
               

               
Conread position:
               
351-613
               

               
Cow position:
               
chr15:11011614-11011350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
175, 119
               

               
Conread position:
               
351-626
               

               
Cow position:
               
chr15:29810112-29810373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
179, 70
               

               
Conread position:
               
352-448
               

               
Cow position:
               
chr15:36422602-36422698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
352-588
               

               
Cow position:
               
chr15:26117514-26117739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
221, 30
               

               
Conread position:
               
352-589
               

               
Cow position:
               
chr15:16583700-16583476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
221, 9
               

               
Conread position:
               
352-590
               

               
Cow position:
               
chr15:10088309-10088550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
178, 126
               

               
Conread position:
               
352-607
               

               
Cow position:
               
chr15:26079361-26079115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
221, 48
               

               
Conread position:
               
352-626
               

               
Cow position:
               
chr15:51898218-51898495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
178, 129
               

               
Conread position:
               
352-629
               

               
Cow position:
               
chr15:49922124-49922411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
180, 130
               

               
Conread position:
               
356-630
               

               
Cow position:
               
chr15:35417631-35417353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
174, 112
               

               
Conread position:
               
357-605
               

               
Cow position:
               
chr15:3726119-3726364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
168, 118
               

               
Conread position:
               
357-626
               

               
Cow position:
               
chr15:16639772-16640048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
77, 152
               

               
Conread position:
               
359-622
               

               
Cow position:
               
chr15:23568130-23567860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
160, 122
               

               
Conread position:
               
360-626
               

               
Cow position:
               
chr15:41360952-41360698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
213, 91
               

               
Conread position:
               
361-609
               

               
Cow position:
               
chr15:23768257-23768012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
169, 8
               

               
Conread position:
               
365-512
               

               
Cow position:
               
chr15:34751092-34751233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
365-569
               

               
Cow position:
               
chr15:22930347-22930138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
366-626
               

               
Cow position:
               
chr15:21420942-21421207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
123, 72
               

               
Conread position:
               
367-626
               

               
Cow position:
               
chr15:5443989-5444248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
176, 114
               

               
Conread position:
               
368-623
               

               
Cow position:
               
chr15:20472542-20472284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
196, 174
               

               
Conread position:
               
368-625
               

               
Cow position:
               
chr15:47280133-47279873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
162, 106
               

               
Conread position:
               
368-626
               

               
Cow position:
               
chr15:15880932-15881199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
109, 121
               

               
Conread position:
               
368-626
               

               
Cow position:
               
chr15:38806496-38806231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
162, 106
               

               
Conread position:
               
368-626
               

               
Cow position:
               
chr15:43914089-43913820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
98, 72
               

               
Conread position:
               
368-626
               

               
Cow position:
               
chr15:51427823-51427559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
29, 240
               

               
Conread position:
               
369-626
               

               
Cow position:
               
chr15:13515373-13515636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 123
               

               
Conread position:
               
374-570
               

               
Cow position:
               
chr15:5717722-5717917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
160, 169
               

               
Conread position:
               
374-626
               

               
Cow position:
               
chr15:42142871-42143119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
189, 104
               

               
Conread position:
               
379-590
               

               
Cow position:
               
chr15:10512256-10512040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
384-626
               

               
Cow position:
               
chr15:24045078-24044834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
30, 74
               

               
Conread position:
               
391-629
               

               
Cow position:
               
chr15:7456726-7456968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
139, 11
               

               
Conread position:
               
402-622
               

               
Cow position:
               
chr15:38877264-38877043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
171, 121
               

               
Conread position:
               
402-626
               

               
Cow position:
               
chr15:9871374-9871146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
87, 14
               

               
Conread position:
               
430-607
               

               
Cow position:
               
chr15:15708046-15707862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
57, 44
               

               
Conread position:
               
431-639
               

               
Cow position:
               
chr15:23702848-23703049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
101, 50
               

               
Conread position:
               
437-613
               

               
Cow position:
               
chr15:40009579-40009395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
460-638
               

               
Cow position:
               
chr15:36422756-36422932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
112, 28
               

               
Conread position:
               
475-626
               

               
Cow position:
               
chr15:41583022-41583174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 6
               
Show alignments to all cow chromosomes.