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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8060L10.5
        

               
Conread position:
               
210-610
               

               
Cow position:
               
chr2:12949932-12950332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
58, 33
               

               
Conread position:
               
217-630
               

               
Cow position:
               
chr2:46033555-46033152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 19
               

               
Conread position:
               
218-607
               

               
Cow position:
               
chr2:47115676-47116074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 55
               

               
Conread position:
               
218-609
               

               
Cow position:
               
chr2:45784975-45784570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 92
               

               
Conread position:
               
218-626
               

               
Cow position:
               
chr2:44051534-44051129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 95
               

               
Conread position:
               
218-626
               

               
Cow position:
               
chr2:53650241-53649850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 93
               

               
Conread position:
               
219-623
               

               
Cow position:
               
chr2:64533567-64533170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
52, 20
               

               
Conread position:
               
220-489
               

               
Cow position:
               
chr2:40373184-40373435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
220-588
               

               
Cow position:
               
chr2:19211833-19212191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
13, 57
               

               
Conread position:
               
220-626
               

               
Cow position:
               
chr2:51594992-51594591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
124, 18
               

               
Conread position:
               
220-629
               

               
Cow position:
               
chr2:76562343-76561931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
53, 22
               

               
Conread position:
               
222-626
               

               
Cow position:
               
chr2:71621826-71622226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 92
               

               
Conread position:
               
223-399
               

               
Cow position:
               
chr2:75562227-75562060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
223-522
               

               
Cow position:
               
chr2:13672734-13672456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
223-626
               

               
Cow position:
               
chr2:6039234-6038830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
52, 16
               

               
Conread position:
               
223-626
               

               
Cow position:
               
chr2:18997938-18997551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 87
               

               
Conread position:
               
223-626
               

               
Cow position:
               
chr2:49467849-49467449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
243, 88
               

               
Conread position:
               
223-629
               

               
Cow position:
               
chr2:67595791-67596193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
10, 95
               

               
Conread position:
               
224-485
               

               
Cow position:
               
chr2:34474064-34474328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
114, 8
               

               
Conread position:
               
224-550
               

               
Cow position:
               
chr2:30911565-30911224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 273
               

               
Conread position:
               
224-555
               

               
Cow position:
               
chr2:11657107-11656789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
51, 18
               

               
Conread position:
               
224-570
               

               
Cow position:
               
chr2:33988086-33988431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
224-607
               

               
Cow position:
               
chr2:21003387-21003020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
267, 50
               

               
Conread position:
               
224-622
               

               
Cow position:
               
chr2:44168280-44167903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
49, 14
               

               
Conread position:
               
224-626
               

               
Cow position:
               
chr2:7194430-7194028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
224-626
               

               
Cow position:
               
chr2:32264174-32264570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
24, 55
               

               
Conread position:
               
225-464
               

               
Cow position:
               
chr2:57802265-57802501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
225-624
               

               
Cow position:
               
chr2:36077580-36077172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
14, 85
               

               
Conread position:
               
225-626
               

               
Cow position:
               
chr2:41248783-41248393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 63
               

               
Conread position:
               
226-569
               

               
Cow position:
               
chr2:58135173-58135511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
127, 11
               

               
Conread position:
               
226-588
               

               
Cow position:
               
chr2:19294810-19294455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
17, 91
               

               
Conread position:
               
226-607
               

               
Cow position:
               
chr2:58687152-58686778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
5, 124
               

               
Conread position:
               
226-609
               

               
Cow position:
               
chr2:46227682-46227305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 66
               

               
Conread position:
               
226-611
               

               
Cow position:
               
chr2:43608886-43609268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
74, 24
               

               
Conread position:
               
226-613
               

               
Cow position:
               
chr2:46188879-46189261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 85
               

               
Conread position:
               
226-626
               

               
Cow position:
               
chr2:24393475-24393863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 91
               

               
Conread position:
               
226-626
               

               
Cow position:
               
chr2:46312652-46312282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
302, 51
               

               
Conread position:
               
227-439
               

               
Cow position:
               
chr2:12889610-12889819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 82
               

               
Conread position:
               
227-541
               

               
Cow position:
               
chr2:47753380-47753697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
45, 112
               

               
Conread position:
               
227-560
               

               
Cow position:
               
chr2:45642277-45642598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 47
               

               
Conread position:
               
228-500
               

               
Cow position:
               
chr2:50905486-50905758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 83
               

               
Conread position:
               
228-536
               

               
Cow position:
               
chr2:19502255-19502563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
22, 84
               

               
Conread position:
               
228-608
               

               
Cow position:
               
chr2:36963738-36963371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
16, 52
               

               
Conread position:
               
228-622
               

               
Cow position:
               
chr2:40489018-40488641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 47
               

               
Conread position:
               
228-626
               

               
Cow position:
               
chr2:7383466-7383855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
121, 46
               

               
Conread position:
               
228-630
               

               
Cow position:
               
chr2:68487771-68488187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 15
               

               
Conread position:
               
228-630
               

               
Cow position:
               
chr2:71437164-71437562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 11
               

               
Conread position:
               
229-433
               

               
Cow position:
               
chr2:39369074-39368870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
126, 14
               

               
Conread position:
               
229-514
               

               
Cow position:
               
chr2:46162166-46161894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
44, 68
               

               
Conread position:
               
229-545
               

               
Cow position:
               
chr2:8821458-8821140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
18, 85
               

               
Conread position:
               
229-558
               

               
Cow position:
               
chr2:77282258-77281914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
15, 219
               

               
Conread position:
               
229-560
               

               
Cow position:
               
chr2:60091221-60091536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
20, 76
               

               
Conread position:
               
229-581
               

               
Cow position:
               
chr2:13369870-13369524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
229-607
               

               
Cow position:
               
chr2:59992034-59992404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
19, 84
               

               
Conread position:
               
229-610
               

               
Cow position:
               
chr2:41148088-41147702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 55
               

               
Conread position:
               
229-616
               

               
Cow position:
               
chr2:69199110-69199483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
229-622
               

               
Cow position:
               
chr2:56350697-56351092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
18, 98
               

               
Conread position:
               
229-624
               

               
Cow position:
               
chr2:1638836-1638426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 194
               

               
Conread position:
               
229-626
               

               
Cow position:
               
chr2:6356151-6356562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 239
               

               
Conread position:
               
229-626
               

               
Cow position:
               
chr2:22253938-22254336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 267
               

               
Conread position:
               
229-626
               

               
Cow position:
               
chr2:46262662-46262270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 113
               

               
Conread position:
               
229-626
               

               
Cow position:
               
chr2:57776566-57776174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
126, 43
               

               
Conread position:
               
229-626
               

               
Cow position:
               
chr2:58074132-58074524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 83
               

               
Conread position:
               
229-629
               

               
Cow position:
               
chr2:40484290-40484702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
37, 79
               

               
Conread position:
               
229-629
               

               
Cow position:
               
chr2:56937891-56937503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
229-630
               

               
Cow position:
               
chr2:16839850-16839455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
39, 14
               

               
Conread position:
               
230-626
               

               
Cow position:
               
chr2:44191710-44191304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 77
               

               
Conread position:
               
230-626
               

               
Cow position:
               
chr2:45624246-45623842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
18, 248
               

               
Conread position:
               
231-626
               

               
Cow position:
               
chr2:13354889-13354501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
49, 23
               

               
Conread position:
               
231-626
               

               
Cow position:
               
chr2:16422780-16422377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
43, 78
               

               
Conread position:
               
232-444
               

               
Cow position:
               
chr2:37891272-37891483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
41, 117
               

               
Conread position:
               
232-446
               

               
Cow position:
               
chr2:47595769-47595986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
232-470
               

               
Cow position:
               
chr2:29283136-29282891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
39, 240
               

               
Conread position:
               
232-473
               

               
Cow position:
               
chr2:43591163-43591394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 80
               

               
Conread position:
               
232-480
               

               
Cow position:
               
chr2:15219320-15219085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
232-511
               

               
Cow position:
               
chr2:24535538-24535258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
7, 182
               

               
Conread position:
               
232-519
               

               
Cow position:
               
chr2:41462216-41462492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
232-540
               

               
Cow position:
               
chr2:52409050-52409384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
8, 254
               

               
Conread position:
               
232-560
               

               
Cow position:
               
chr2:19137680-19138001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
232-571
               

               
Cow position:
               
chr2:17841783-17842095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
43, 20
               

               
Conread position:
               
232-572
               

               
Cow position:
               
chr2:44007638-44007299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 87
               

               
Conread position:
               
232-588
               

               
Cow position:
               
chr2:32660393-32660035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
16, 82
               

               
Conread position:
               
232-588
               

               
Cow position:
               
chr2:40728569-40728213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
232-605
               

               
Cow position:
               
chr2:46129955-46130306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
219, 77
               

               
Conread position:
               
232-609
               

               
Cow position:
               
chr2:80275082-80275453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
48, 80
               

               
Conread position:
               
232-616
               

               
Cow position:
               
chr2:46052711-46052338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 71
               

               
Conread position:
               
232-619
               

               
Cow position:
               
chr2:46358038-46357669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
132, 40
               

               
Conread position:
               
232-621
               

               
Cow position:
               
chr2:84480291-84480689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
232-622
               

               
Cow position:
               
chr2:46746147-46745748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
13, 100
               

               
Conread position:
               
232-624
               

               
Cow position:
               
chr2:29122097-29121714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 85
               

               
Conread position:
               
232-626
               

               
Cow position:
               
chr2:7523906-7524315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
232-626
               

               
Cow position:
               
chr2:20947578-20947196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
137, 11
               

               
Conread position:
               
232-626
               

               
Cow position:
               
chr2:25597261-25597664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
42, 149
               

               
Conread position:
               
232-626
               

               
Cow position:
               
chr2:41452444-41452054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 80
               

               
Conread position:
               
232-626
               

               
Cow position:
               
chr2:55526560-55526935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
10, 83
               

               
Conread position:
               
232-629
               

               
Cow position:
               
chr2:28820582-28820182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
42, 75
               

               
Conread position:
               
232-630
               

               
Cow position:
               
chr2:82957893-82957495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
16, 92
               

               
Conread position:
               
233-426
               

               
Cow position:
               
chr2:69793616-69793829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
233-527
               

               
Cow position:
               
chr2:12839818-12840116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
9, 179
               

               
Conread position:
               
233-607
               

               
Cow position:
               
chr2:56828339-56828728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
58, 107
               

               
Conread position:
               
233-608
               

               
Cow position:
               
chr2:42608274-42607906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
41, 10
               

               
Conread position:
               
233-622
               

               
Cow position:
               
chr2:22371745-22372122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 73
               

               
Conread position:
               
233-626
               

               
Cow position:
               
chr2:42927215-42927625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 169
               

               
Conread position:
               
233-626
               

               
Cow position:
               
chr2:52484755-52485155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
165, 44
               

               
Conread position:
               
233-630
               

               
Cow position:
               
chr2:72183256-72183670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 315
               

               
Conread position:
               
233-632
               

               
Cow position:
               
chr2:75227414-75227015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 58
               

               
Conread position:
               
234-518
               

               
Cow position:
               
chr2:45721049-45721330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 109
               

               
Conread position:
               
234-521
               

               
Cow position:
               
chr2:22042763-22042468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
41, 198
               

               
Conread position:
               
234-629
               

               
Cow position:
               
chr2:45498994-45499378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 72
               

               
Conread position:
               
235-418
               

               
Cow position:
               
chr2:26302469-26302653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 102
               

               
Conread position:
               
235-526
               

               
Cow position:
               
chr2:45597188-45596908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
9, 79
               

               
Conread position:
               
235-528
               

               
Cow position:
               
chr2:50449702-50449980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 80
               

               
Conread position:
               
235-624
               

               
Cow position:
               
chr2:21382642-21383029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 12
               

               
Conread position:
               
235-626
               

               
Cow position:
               
chr2:17940079-17940465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
14, 77
               

               
Conread position:
               
235-626
               

               
Cow position:
               
chr2:20791214-20791601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
28, 90
               

               
Conread position:
               
235-626
               

               
Cow position:
               
chr2:62743803-62744185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 8
               

               
Conread position:
               
236-607
               

               
Cow position:
               
chr2:13002003-13001647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
41, 72
               

               
Conread position:
               
236-624
               

               
Cow position:
               
chr2:2673737-2673350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
39, 76
               

               
Conread position:
               
237-422
               

               
Cow position:
               
chr2:66629406-66629218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
38, 80
               

               
Conread position:
               
237-511
               

               
Cow position:
               
chr2:21410435-21410159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 75
               

               
Conread position:
               
237-534
               

               
Cow position:
               
chr2:46057806-46058090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
34, 73
               

               
Conread position:
               
237-538
               

               
Cow position:
               
chr2:46967993-46968275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
221, 11
               

               
Conread position:
               
237-540
               

               
Cow position:
               
chr2:39663584-39663287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
37, 63
               

               
Conread position:
               
237-590
               

               
Cow position:
               
chr2:58153909-58153564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
237-601
               

               
Cow position:
               
chr2:85794763-85795106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
38, 96
               

               
Conread position:
               
237-619
               

               
Cow position:
               
chr2:31784134-31783768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
38, 75
               

               
Conread position:
               
237-621
               

               
Cow position:
               
chr2:972023-971665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
336, 17
               

               
Conread position:
               
237-626
               

               
Cow position:
               
chr2:34749772-34750158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
237-626
               

               
Cow position:
               
chr2:43995136-43994760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 72
               

               
Conread position:
               
237-630
               

               
Cow position:
               
chr2:38965815-38965441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
260, 54
               

               
Conread position:
               
237-631
               

               
Cow position:
               
chr2:14218860-14218469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
238-476
               

               
Cow position:
               
chr2:40703466-40703690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
238-477
               

               
Cow position:
               
chr2:64773606-64773360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
238-559
               

               
Cow position:
               
chr2:387570-387881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
10, 78
               

               
Conread position:
               
238-559
               

               
Cow position:
               
chr2:67927585-67927902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
12, 71
               

               
Conread position:
               
239-472
               

               
Cow position:
               
chr2:5604724-5604505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
239-479
               

               
Cow position:
               
chr2:37619706-37619941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
35, 63
               

               
Conread position:
               
239-523
               

               
Cow position:
               
chr2:46164298-46164558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
32, 71
               

               
Conread position:
               
239-528
               

               
Cow position:
               
chr2:38646944-38647232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
10, 74
               

               
Conread position:
               
239-534
               

               
Cow position:
               
chr2:43444814-43444518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
10, 68
               

               
Conread position:
               
239-552
               

               
Cow position:
               
chr2:992356-992054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
116, 51
               

               
Conread position:
               
239-559
               

               
Cow position:
               
chr2:29735030-29734716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
202, 27
               

               
Conread position:
               
239-559
               

               
Cow position:
               
chr2:76861247-76861568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
33, 98
               

               
Conread position:
               
239-570
               

               
Cow position:
               
chr2:51097878-51098205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
11, 45
               

               
Conread position:
               
239-571
               

               
Cow position:
               
chr2:1073725-1073414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
112, 33
               

               
Conread position:
               
239-622
               

               
Cow position:
               
chr2:36055579-36055972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 8
               

               
Conread position:
               
239-623
               

               
Cow position:
               
chr2:41087902-41088285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
36, 71
               

               
Conread position:
               
239-626
               

               
Cow position:
               
chr2:6539016-6539413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 258
               

               
Conread position:
               
239-626
               

               
Cow position:
               
chr2:44986127-44986500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
230, 30
               

               
Conread position:
               
239-626
               

               
Cow position:
               
chr2:76968960-76969351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
36, 108
               

               
Conread position:
               
239-626
               

               
Cow position:
               
chr2:77211982-77212355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
289, 37
               

               
Conread position:
               
239-638
               

               
Cow position:
               
chr2:37009610-37009233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
334, 35
               

               
Conread position:
               
239-639
               

               
Cow position:
               
chr2:46120441-46120823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 68
               

               
Conread position:
               
240-450
               

               
Cow position:
               
chr2:46317076-46316874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 67
               

               
Conread position:
               
240-609
               

               
Cow position:
               
chr2:19494417-19494048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 72
               

               
Conread position:
               
240-609
               

               
Cow position:
               
chr2:61420955-61421334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
105, 34
               

               
Conread position:
               
240-626
               

               
Cow position:
               
chr2:54654410-54654793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 73
               

               
Conread position:
               
242-567
               

               
Cow position:
               
chr2:46204722-46204404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
13, 72
               

               
Conread position:
               
242-613
               

               
Cow position:
               
chr2:36424243-36423846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
47, 198
               

               
Conread position:
               
242-613
               

               
Cow position:
               
chr2:78249940-78249572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 70
               

               
Conread position:
               
242-622
               

               
Cow position:
               
chr2:46351582-46351935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
32, 73
               

               
Conread position:
               
242-626
               

               
Cow position:
               
chr2:45619196-45619569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
33, 70
               

               
Conread position:
               
243-557
               

               
Cow position:
               
chr2:72309797-72310104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
63, 230
               

               
Conread position:
               
243-607
               

               
Cow position:
               
chr2:83184374-83183981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
85, 230
               

               
Conread position:
               
243-626
               

               
Cow position:
               
chr2:53851660-53851258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
28, 179
               

               
Conread position:
               
245-453
               

               
Cow position:
               
chr2:81294027-81293822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
187, 66
               

               
Conread position:
               
247-407
               

               
Cow position:
               
chr2:11658957-11659132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
247-449
               

               
Cow position:
               
chr2:13695042-13695238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
25, 51
               

               
Conread position:
               
247-479
               

               
Cow position:
               
chr2:60368529-60368289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
247-480
               

               
Cow position:
               
chr2:24722081-24722299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
247-519
               

               
Cow position:
               
chr2:46124492-46124768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
26, 50
               

               
Conread position:
               
247-559
               

               
Cow position:
               
chr2:30351508-30351808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
247-616
               

               
Cow position:
               
chr2:15597287-15597641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
125, 23
               

               
Conread position:
               
247-626
               

               
Cow position:
               
chr2:16505274-16505651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
248-638
               

               
Cow position:
               
chr2:1422547-1422184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
8, 65
               

               
Conread position:
               
249-492
               

               
Cow position:
               
chr2:56325347-56325604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
249-626
               

               
Cow position:
               
chr2:46202461-46202093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 66
               

               
Conread position:
               
251-626
               

               
Cow position:
               
chr2:44170749-44170382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 59
               

               
Conread position:
               
252-624
               

               
Cow position:
               
chr2:47065303-47064943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 60
               

               
Conread position:
               
255-491
               

               
Cow position:
               
chr2:39750304-39750075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
20, 60
               

               
Conread position:
               
255-626
               

               
Cow position:
               
chr2:57939874-57939508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 45
               

               
Conread position:
               
258-441
               

               
Cow position:
               
chr2:56338851-56339020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
259-559
               

               
Cow position:
               
chr2:30642465-30642768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
16, 228
               

               
Conread position:
               
266-521
               

               
Cow position:
               
chr2:47443446-47443193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
278-626
               

               
Cow position:
               
chr2:20900298-20900642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
252, 31
               

               
Conread position:
               
278-626
               

               
Cow position:
               
chr2:26805948-26806288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
214, 67
               

               
Conread position:
               
297-544
               

               
Cow position:
               
chr2:47893758-47894010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
37, 158
               

               
Conread position:
               
302-622
               

               
Cow position:
               
chr2:80116245-80115929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
142, 55
               

               
Conread position:
               
303-560
               

               
Cow position:
               
chr2:42265550-42265802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
148, 97
               

               
Conread position:
               
311-569
               

               
Cow position:
               
chr2:60691030-60690768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
40, 227
               

               
Conread position:
               
312-570
               

               
Cow position:
               
chr2:44222967-44222704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
312-626
               

               
Cow position:
               
chr2:36017273-36017588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
38, 110
               

               
Conread position:
               
312-626
               

               
Cow position:
               
chr2:46909291-46909612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
31, 72
               

               
Conread position:
               
313-554
               

               
Cow position:
               
chr2:13271275-13271522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
28, 139
               

               
Conread position:
               
313-581
               

               
Cow position:
               
chr2:45439580-45439310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 74
               

               
Conread position:
               
315-622
               

               
Cow position:
               
chr2:68190505-68190812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
133, 86
               

               
Conread position:
               
316-524
               

               
Cow position:
               
chr2:13645455-13645250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
317-438
               

               
Cow position:
               
chr2:19031003-19031125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
317-597
               

               
Cow position:
               
chr2:9369783-9370063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
34, 66
               

               
Conread position:
               
319-521
               

               
Cow position:
               
chr2:17257978-17257777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
320-606
               

               
Cow position:
               
chr2:54971315-54971023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
27, 7
               

               
Conread position:
               
321-613
               

               
Cow position:
               
chr2:45535598-45535300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 238
               

               
Conread position:
               
322-569
               

               
Cow position:
               
chr2:32402837-32403088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
17, 101
               

               
Conread position:
               
323-614
               

               
Cow position:
               
chr2:31460205-31460496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
158, 91
               

               
Conread position:
               
327-626
               

               
Cow position:
               
chr2:16428271-16428575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
15, 94
               

               
Conread position:
               
331-622
               

               
Cow position:
               
chr2:15568074-15568355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
120, 68
               

               
Conread position:
               
334-600
               

               
Cow position:
               
chr2:7573384-7573651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
334-622
               

               
Cow position:
               
chr2:15674661-15674371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
19, 76
               

               
Conread position:
               
335-534
               

               
Cow position:
               
chr2:41382121-41381922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 156
               

               
Conread position:
               
335-540
               

               
Cow position:
               
chr2:1709086-1708884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
195, 86
               

               
Conread position:
               
335-621
               

               
Cow position:
               
chr2:75600841-75600544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
16, 148
               

               
Conread position:
               
336-484
               

               
Cow position:
               
chr2:39271313-39271463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
337-554
               

               
Cow position:
               
chr2:61815681-61815900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
19, 97
               

               
Conread position:
               
337-600
               

               
Cow position:
               
chr2:47056021-47055757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
224, 8
               

               
Conread position:
               
337-609
               

               
Cow position:
               
chr2:17444915-17444633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
18, 192
               

               
Conread position:
               
337-624
               

               
Cow position:
               
chr2:59952743-59953028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
12, 137
               

               
Conread position:
               
338-517
               

               
Cow position:
               
chr2:55817852-55817673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
339-626
               

               
Cow position:
               
chr2:39489887-39489610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
32, 37
               

               
Conread position:
               
340-571
               

               
Cow position:
               
chr2:61097010-61096783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
178, 77
               

               
Conread position:
               
340-585
               

               
Cow position:
               
chr2:47148020-47147773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
13, 44
               

               
Conread position:
               
342-498
               

               
Cow position:
               
chr2:47879353-47879196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
11, 121
               

               
Conread position:
               
342-518
               

               
Cow position:
               
chr2:28301315-28301140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
11, 48
               

               
Conread position:
               
342-590
               

               
Cow position:
               
chr2:15298647-15298395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
132, 5
               

               
Conread position:
               
342-607
               

               
Cow position:
               
chr2:15329495-15329237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
14, 75
               

               
Conread position:
               
342-626
               

               
Cow position:
               
chr2:32115178-32114898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
148, 40
               

               
Conread position:
               
342-626
               

               
Cow position:
               
chr2:46343036-46343317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
12, 81
               

               
Conread position:
               
342-626
               

               
Cow position:
               
chr2:64212443-64212736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
342-632
               

               
Cow position:
               
chr2:39584561-39584270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 130
               

               
Conread position:
               
343-540
               

               
Cow position:
               
chr2:78197977-78197785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
187, 85
               

               
Conread position:
               
344-609
               

               
Cow position:
               
chr2:45666140-45665870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
187, 16
               

               
Conread position:
               
345-441
               

               
Cow position:
               
chr2:42241224-42241322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
346-622
               

               
Cow position:
               
chr2:9173164-9173435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
13, 107
               

               
Conread position:
               
347-589
               

               
Cow position:
               
chr2:59819702-59819943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
152, 123
               

               
Conread position:
               
347-614
               

               
Cow position:
               
chr2:37373955-37373702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
226, 54
               

               
Conread position:
               
348-446
               

               
Cow position:
               
chr2:42872433-42872335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
348-528
               

               
Cow position:
               
chr2:994261-994439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
153, 127
               

               
Conread position:
               
348-557
               

               
Cow position:
               
chr2:14626695-14626477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
128, 80
               

               
Conread position:
               
348-559
               

               
Cow position:
               
chr2:50352997-50352781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
145, 169
               

               
Conread position:
               
348-571
               

               
Cow position:
               
chr2:15391882-15391668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
182, 100
               

               
Conread position:
               
348-588
               

               
Cow position:
               
chr2:24593971-24593732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
131, 73
               

               
Conread position:
               
348-588
               

               
Cow position:
               
chr2:39334767-39335004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
87, 114
               

               
Conread position:
               
348-589
               

               
Cow position:
               
chr2:45542295-45542535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 127
               

               
Conread position:
               
348-601
               

               
Cow position:
               
chr2:69419481-69419738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
348-616
               

               
Cow position:
               
chr2:47624303-47624569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
225, 68
               

               
Conread position:
               
348-626
               

               
Cow position:
               
chr2:827507-827785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
126, 137
               

               
Conread position:
               
348-626
               

               
Cow position:
               
chr2:9063377-9063096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 70
               

               
Conread position:
               
348-626
               

               
Cow position:
               
chr2:13604573-13604291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
183, 133
               

               
Conread position:
               
348-626
               

               
Cow position:
               
chr2:19328651-19328372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
180, 257
               

               
Conread position:
               
348-626
               

               
Cow position:
               
chr2:41461473-41461190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
348-626
               

               
Cow position:
               
chr2:81348773-81349059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
118, 112
               

               
Conread position:
               
348-629
               

               
Cow position:
               
chr2:43624429-43624708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
47, 82
               

               
Conread position:
               
349-557
               

               
Cow position:
               
chr2:61132919-61132711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
101, 65
               

               
Conread position:
               
350-438
               

               
Cow position:
               
chr2:46143231-46143143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
89
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
350-476
               

               
Cow position:
               
chr2:53491347-53491475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
350-478
               

               
Cow position:
               
chr2:6329129-6329256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
100, 107
               

               
Conread position:
               
350-485
               

               
Cow position:
               
chr2:1335593-1335728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
350-512
               

               
Cow position:
               
chr2:44217807-44217967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
350-514
               

               
Cow position:
               
chr2:82116191-82116029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
124, 9
               

               
Conread position:
               
350-518
               

               
Cow position:
               
chr2:10439941-10439772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
124, 140
               

               
Conread position:
               
350-519
               

               
Cow position:
               
chr2:59427551-59427382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
145, 84
               

               
Conread position:
               
350-521
               

               
Cow position:
               
chr2:40466737-40466567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
350-523
               

               
Cow position:
               
chr2:40880170-40880001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
350-527
               

               
Cow position:
               
chr2:63074753-63074933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
132, 66
               

               
Conread position:
               
350-528
               

               
Cow position:
               
chr2:14634286-14634113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
350-528
               

               
Cow position:
               
chr2:39513576-39513392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
65, 145
               

               
Conread position:
               
350-535
               

               
Cow position:
               
chr2:45141515-45141323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
127, 83
               

               
Conread position:
               
350-536
               

               
Cow position:
               
chr2:46383364-46383547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
350-537
               

               
Cow position:
               
chr2:57733536-57733345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
350-544
               

               
Cow position:
               
chr2:58035209-58035014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
350-547
               

               
Cow position:
               
chr2:29860104-29859917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
350-549
               

               
Cow position:
               
chr2:69350463-69350665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
350-550
               

               
Cow position:
               
chr2:40257310-40257513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
350-551
               

               
Cow position:
               
chr2:38640425-38640215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
350-556
               

               
Cow position:
               
chr2:46971226-46971015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
350-559
               

               
Cow position:
               
chr2:22113595-22113809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
92, 9
               

               
Conread position:
               
350-559
               

               
Cow position:
               
chr2:38273651-38273438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
130, 24
               

               
Conread position:
               
350-560
               

               
Cow position:
               
chr2:46190876-46191083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
350-569
               

               
Cow position:
               
chr2:1487273-1487057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
182, 123
               

               
Conread position:
               
350-569
               

               
Cow position:
               
chr2:29160008-29159794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
350-569
               

               
Cow position:
               
chr2:42183473-42183258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
141, 16
               

               
Conread position:
               
350-569
               

               
Cow position:
               
chr2:44025479-44025258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
133, 64
               

               
Conread position:
               
350-569
               

               
Cow position:
               
chr2:48634944-48635161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
180, 16
               

               
Conread position:
               
350-570
               

               
Cow position:
               
chr2:55062979-55062768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
180, 51
               

               
Conread position:
               
350-571
               

               
Cow position:
               
chr2:56056850-56056628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
118, 110
               

               
Conread position:
               
350-571
               

               
Cow position:
               
chr2:62861690-62861470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
71, 133
               

               
Conread position:
               
350-584
               

               
Cow position:
               
chr2:38658685-38658912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
180, 95
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr2:17805668-17805904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
140, 29
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr2:54810753-54810995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
180, 52
               

               
Conread position:
               
350-600
               

               
Cow position:
               
chr2:38747761-38747514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
223, 125
               

               
Conread position:
               
350-600
               

               
Cow position:
               
chr2:41954987-41954732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
178, 24
               

               
Conread position:
               
350-600
               

               
Cow position:
               
chr2:73094693-73094939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
134, 93
               

               
Conread position:
               
350-605
               

               
Cow position:
               
chr2:43790202-43789946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 131
               

               
Conread position:
               
350-607
               

               
Cow position:
               
chr2:33554068-33554320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 206
               

               
Conread position:
               
350-607
               

               
Cow position:
               
chr2:45912530-45912793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
350-609
               

               
Cow position:
               
chr2:83410608-83410349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
9, 73
               

               
Conread position:
               
350-610
               

               
Cow position:
               
chr2:44081538-44081274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
180, 42
               

               
Conread position:
               
350-610
               

               
Cow position:
               
chr2:80963548-80963809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
180, 71
               

               
Conread position:
               
350-613
               

               
Cow position:
               
chr2:24434178-24434441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 111
               

               
Conread position:
               
350-613
               

               
Cow position:
               
chr2:38785490-38785768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
51, 246
               

               
Conread position:
               
350-613
               

               
Cow position:
               
chr2:39501141-39500862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
79, 197
               

               
Conread position:
               
350-613
               

               
Cow position:
               
chr2:77467348-77467609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
135, 41
               

               
Conread position:
               
350-615
               

               
Cow position:
               
chr2:41185160-41184898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
72, 105
               

               
Conread position:
               
350-616
               

               
Cow position:
               
chr2:8354846-8355110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
180, 64
               

               
Conread position:
               
350-616
               

               
Cow position:
               
chr2:25448430-25448163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 170
               

               
Conread position:
               
350-619
               

               
Cow position:
               
chr2:23120667-23120933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
138, 96
               

               
Conread position:
               
350-620
               

               
Cow position:
               
chr2:77157246-77157520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
148, 64
               

               
Conread position:
               
350-621
               

               
Cow position:
               
chr2:62644694-62644420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 123
               

               
Conread position:
               
350-622
               

               
Cow position:
               
chr2:6160241-6160502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 98
               

               
Conread position:
               
350-622
               

               
Cow position:
               
chr2:17114628-17114906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 93
               

               
Conread position:
               
350-622
               

               
Cow position:
               
chr2:19286980-19287252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 154
               

               
Conread position:
               
350-622
               

               
Cow position:
               
chr2:40402925-40403196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
129, 150
               

               
Conread position:
               
350-622
               

               
Cow position:
               
chr2:44065673-44065416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
211, 43
               

               
Conread position:
               
350-622
               

               
Cow position:
               
chr2:46247359-46247633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
180, 118
               

               
Conread position:
               
350-622
               

               
Cow position:
               
chr2:48361674-48361397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 114
               

               
Conread position:
               
350-622
               

               
Cow position:
               
chr2:63273843-63274119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
101, 94
               

               
Conread position:
               
350-622
               

               
Cow position:
               
chr2:70896136-70895855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
126, 133
               

               
Conread position:
               
350-624
               

               
Cow position:
               
chr2:5130352-5130626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
21, 43
               

               
Conread position:
               
350-624
               

               
Cow position:
               
chr2:18621518-18621234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
87, 141
               

               
Conread position:
               
350-624
               

               
Cow position:
               
chr2:26438623-26438901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
180, 81
               

               
Conread position:
               
350-624
               

               
Cow position:
               
chr2:32416758-32417031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
76, 126
               

               
Conread position:
               
350-624
               

               
Cow position:
               
chr2:39941577-39941314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
181, 105
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr2:79856-80134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
180, 245
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr2:6697402-6697667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
180, 25
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr2:14089894-14089605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
180, 7
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr2:15694307-15694055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
222, 52
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr2:17966927-17967207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 105
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr2:30817070-30816781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
50, 65
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr2:35136059-35135797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
252, 173
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr2:36436308-36436027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
132, 20
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr2:39263589-39263314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
170, 64
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr2:39564455-39564179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
184, 46
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr2:39815182-39815461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
178, 130
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr2:42255537-42255259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
180, 134
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr2:42801140-42800867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 79
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr2:44232351-44232630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
181, 62
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr2:45574902-45575170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr2:47645148-47644876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
180, 64
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr2:63331700-63331987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
37, 130
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr2:69747514-69747795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 112
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr2:69823692-69823412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
62, 125
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr2:81388792-81388516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
143, 58
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr2:81927949-81927681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
181, 66
               

               
Conread position:
               
350-627
               

               
Cow position:
               
chr2:70704360-70704076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
350-629
               

               
Cow position:
               
chr2:549228-549507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 64
               

               
Conread position:
               
350-629
               

               
Cow position:
               
chr2:13582685-13582401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
189, 51
               

               
Conread position:
               
350-629
               

               
Cow position:
               
chr2:15250283-15250002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
132, 42
               

               
Conread position:
               
350-629
               

               
Cow position:
               
chr2:45478495-45478769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
221, 120
               

               
Conread position:
               
350-629
               

               
Cow position:
               
chr2:50566036-50565745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
350-629
               

               
Cow position:
               
chr2:82580826-82581112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 282
               

               
Conread position:
               
350-632
               

               
Cow position:
               
chr2:43835459-43835744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
52, 79
               

               
Conread position:
               
350-633
               

               
Cow position:
               
chr2:85339355-85339642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
17, 249
               

               
Conread position:
               
350-636
               

               
Cow position:
               
chr2:46374841-46375113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
145, 58
               

               
Conread position:
               
350-638
               

               
Cow position:
               
chr2:1762894-1762604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 67
               

               
Conread position:
               
350-638
               

               
Cow position:
               
chr2:53532710-53532992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
223, 179
               

               
Conread position:
               
351-558
               

               
Cow position:
               
chr2:39798343-39798133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
351-570
               

               
Cow position:
               
chr2:80770216-80770000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
47, 71
               

               
Conread position:
               
351-588
               

               
Cow position:
               
chr2:18858044-18858283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
179, 28
               

               
Conread position:
               
351-609
               

               
Cow position:
               
chr2:26170845-26170582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
179, 18
               

               
Conread position:
               
351-622
               

               
Cow position:
               
chr2:33262515-33262792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
191, 65
               

               
Conread position:
               
351-622
               

               
Cow position:
               
chr2:39514136-39513850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
101, 120
               

               
Conread position:
               
351-622
               

               
Cow position:
               
chr2:39590358-39590079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 77
               

               
Conread position:
               
351-624
               

               
Cow position:
               
chr2:7533670-7533943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
130, 45
               

               
Conread position:
               
351-624
               

               
Cow position:
               
chr2:41019108-41019390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
75, 120
               

               
Conread position:
               
351-624
               

               
Cow position:
               
chr2:54790383-54790106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
36, 134
               

               
Conread position:
               
351-626
               

               
Cow position:
               
chr2:54789875-54789595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 95
               

               
Conread position:
               
351-626
               

               
Cow position:
               
chr2:66480085-66480359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
179, 244
               

               
Conread position:
               
351-626
               

               
Cow position:
               
chr2:70945505-70945227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
225, 241
               

               
Conread position:
               
351-629
               

               
Cow position:
               
chr2:35948579-35948847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
108, 65
               

               
Conread position:
               
351-638
               

               
Cow position:
               
chr2:85281026-85281298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
180, 23
               

               
Conread position:
               
352-526
               

               
Cow position:
               
chr2:58479574-58479748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
127, 7
               

               
Conread position:
               
352-547
               

               
Cow position:
               
chr2:47015236-47015430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
99, 77
               

               
Conread position:
               
352-625
               

               
Cow position:
               
chr2:38362266-38362545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 40
               

               
Conread position:
               
352-626
               

               
Cow position:
               
chr2:46230663-46230941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
179, 121
               

               
Conread position:
               
352-626
               

               
Cow position:
               
chr2:48863891-48864155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 90
               

               
Conread position:
               
352-630
               

               
Cow position:
               
chr2:46331165-46330878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
352-639
               

               
Cow position:
               
chr2:76110496-76110209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
178, 104
               

               
Conread position:
               
353-624
               

               
Cow position:
               
chr2:13684799-13684533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 137
               

               
Conread position:
               
354-558
               

               
Cow position:
               
chr2:26880180-26879978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
171, 74
               

               
Conread position:
               
354-613
               

               
Cow position:
               
chr2:80324749-80325013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
62, 90
               

               
Conread position:
               
355-632
               

               
Cow position:
               
chr2:42936112-42936393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
175, 203
               

               
Conread position:
               
358-626
               

               
Cow position:
               
chr2:16564771-16564509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
176, 21
               

               
Conread position:
               
358-626
               

               
Cow position:
               
chr2:44550755-44551011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
218, 61
               

               
Conread position:
               
359-612
               

               
Cow position:
               
chr2:52344844-52344590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 89
               

               
Conread position:
               
359-622
               

               
Cow position:
               
chr2:30144809-30144552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
91, 62
               

               
Conread position:
               
359-626
               

               
Cow position:
               
chr2:42226169-42226445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 104
               

               
Conread position:
               
360-560
               

               
Cow position:
               
chr2:80865762-80865962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
170, 124
               

               
Conread position:
               
362-591
               

               
Cow position:
               
chr2:7769587-7769369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
168, 51
               

               
Conread position:
               
362-626
               

               
Cow position:
               
chr2:988777-988516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
12, 60
               

               
Conread position:
               
363-519
               

               
Cow position:
               
chr2:16492733-16492580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
364-559
               

               
Cow position:
               
chr2:17409919-17410111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
167, 104
               

               
Conread position:
               
364-626
               

               
Cow position:
               
chr2:777598-777870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
111, 50
               

               
Conread position:
               
364-626
               

               
Cow position:
               
chr2:46293958-46294211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
166, 109
               

               
Conread position:
               
366-600
               

               
Cow position:
               
chr2:69367041-69367282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
164, 109
               

               
Conread position:
               
367-619
               

               
Cow position:
               
chr2:1658594-1658323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
368-571
               

               
Cow position:
               
chr2:16481777-16481979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
192, 80
               

               
Conread position:
               
368-626
               

               
Cow position:
               
chr2:41145399-41145136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
368-626
               

               
Cow position:
               
chr2:68970823-68970559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
164, 129
               

               
Conread position:
               
368-626
               

               
Cow position:
               
chr2:71800000-71800265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
151, 113
               

               
Conread position:
               
370-626
               

               
Cow position:
               
chr2:4655016-4655274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
160, 45
               

               
Conread position:
               
374-626
               

               
Cow position:
               
chr2:72528038-72527778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
156, 104
               

               
Conread position:
               
376-559
               

               
Cow position:
               
chr2:29779462-29779644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
154, 112
               

               
Conread position:
               
376-616
               

               
Cow position:
               
chr2:1300319-1300556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
197, 40
               

               
Conread position:
               
376-624
               

               
Cow position:
               
chr2:19597872-19597621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
57, 25
               

               
Conread position:
               
382-624
               

               
Cow position:
               
chr2:4254465-4254708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
148, 93
               

               
Conread position:
               
390-626
               

               
Cow position:
               
chr2:36878156-36878392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
182, 140
               

               
Conread position:
               
391-571
               

               
Cow position:
               
chr2:46137095-46137274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
92, 142
               

               
Conread position:
               
391-609
               

               
Cow position:
               
chr2:67313628-67313850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
140, 97
               

               
Conread position:
               
392-615
               

               
Cow position:
               
chr2:34695305-34695074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
395-638
               

               
Cow position:
               
chr2:11806376-11806134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
136, 80
               

               
Conread position:
               
396-626
               

               
Cow position:
               
chr2:43577743-43577971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
55, 12
               

               
Conread position:
               
409-616
               

               
Cow position:
               
chr2:38628952-38628739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
416-626
               

               
Cow position:
               
chr2:37920749-37920955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
114, 50
               

               
Conread position:
               
423-608
               

               
Cow position:
               
chr2:21284962-21284774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
107, 57
               

               
Conread position:
               
424-626
               

               
Cow position:
               
chr2:46245407-46245613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
57, 19
               

               
Conread position:
               
425-571
               

               
Cow position:
               
chr2:63568393-63568247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 36
               

               
Conread position:
               
430-619
               

               
Cow position:
               
chr2:39052006-39051811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
430-626
               

               
Cow position:
               
chr2:77378266-77378068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
101, 38
               

               
Conread position:
               
430-638
               

               
Cow position:
               
chr2:15815608-15815405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
143, 18
               

               
Conread position:
               
431-626
               

               
Cow position:
               
chr2:68716647-68716843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
101, 57
               

               
Conread position:
               
435-624
               

               
Cow position:
               
chr2:21078599-21078403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
437-626
               

               
Cow position:
               
chr2:42938283-42938475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
41, 25
               

               
Conread position:
               
460-625
               

               
Cow position:
               
chr2:28480127-28480290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 15
               

               
Conread position:
               
460-626
               

               
Cow position:
               
chr2:30586603-30586435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 50
               

               
Conread position:
               
471-626
               

               
Cow position:
               
chr2:48069413-48069576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               
Show alignments to all cow chromosomes.