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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8060L10.5
        

               
Conread position:
               
191-626
               

               
Cow position:
               
chr24:42344774-42345208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
219-526
               

               
Cow position:
               
chr24:39910829-39911134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
24, 96
               

               
Conread position:
               
219-552
               

               
Cow position:
               
chr24:39791760-39791414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 28
               

               
Conread position:
               
219-624
               

               
Cow position:
               
chr24:16089430-16089035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
29, 92
               

               
Conread position:
               
220-626
               

               
Cow position:
               
chr24:40301359-40300957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 95
               

               
Conread position:
               
223-543
               

               
Cow position:
               
chr24:18615212-18614886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
25, 9
               

               
Conread position:
               
223-569
               

               
Cow position:
               
chr24:32054842-32054518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
17, 54
               

               
Conread position:
               
223-578
               

               
Cow position:
               
chr24:39523255-39523599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
45, 89
               

               
Conread position:
               
223-609
               

               
Cow position:
               
chr24:19535063-19535438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
249, 16
               

               
Conread position:
               
224-525
               

               
Cow position:
               
chr24:37823723-37823432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
39, 7
               

               
Conread position:
               
225-590
               

               
Cow position:
               
chr24:16995071-16994720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
343, 63
               

               
Conread position:
               
226-469
               

               
Cow position:
               
chr24:28689887-28689624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
227-528
               

               
Cow position:
               
chr24:230473-230177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
21, 82
               

               
Conread position:
               
227-551
               

               
Cow position:
               
chr24:15289020-15288702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 90
               

               
Conread position:
               
228-485
               

               
Cow position:
               
chr24:22133356-22133112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 68
               

               
Conread position:
               
228-626
               

               
Cow position:
               
chr24:18484799-18485199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 91
               

               
Conread position:
               
229-414
               

               
Cow position:
               
chr24:18328269-18328462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
229-418
               

               
Cow position:
               
chr24:21656601-21656415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
16, 85
               

               
Conread position:
               
229-437
               

               
Cow position:
               
chr24:358559-358356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 86
               

               
Conread position:
               
229-448
               

               
Cow position:
               
chr24:3412869-3412662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
229-486
               

               
Cow position:
               
chr24:28510981-28510737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
10, 82
               

               
Conread position:
               
229-556
               

               
Cow position:
               
chr24:24661930-24662258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
70, 19
               

               
Conread position:
               
229-616
               

               
Cow position:
               
chr24:28303173-28303542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
167, 59
               

               
Conread position:
               
229-622
               

               
Cow position:
               
chr24:6103017-6102627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
32, 50
               

               
Conread position:
               
229-626
               

               
Cow position:
               
chr24:28990763-28990366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 115
               

               
Conread position:
               
229-626
               

               
Cow position:
               
chr24:30236061-30235670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 83
               

               
Conread position:
               
229-626
               

               
Cow position:
               
chr24:32204595-32204993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
46, 83
               

               
Conread position:
               
229-639
               

               
Cow position:
               
chr24:43028140-43028537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 14
               

               
Conread position:
               
230-622
               

               
Cow position:
               
chr24:27607923-27608298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
123, 47
               

               
Conread position:
               
230-624
               

               
Cow position:
               
chr24:3166010-3165619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
6, 87
               

               
Conread position:
               
231-626
               

               
Cow position:
               
chr24:25194454-25194067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
11, 92
               

               
Conread position:
               
232-622
               

               
Cow position:
               
chr24:11119480-11119082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
43, 217
               

               
Conread position:
               
232-624
               

               
Cow position:
               
chr24:11887339-11886960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 60
               

               
Conread position:
               
232-626
               

               
Cow position:
               
chr24:5142124-5141741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 73
               

               
Conread position:
               
232-637
               

               
Cow position:
               
chr24:34273004-34272598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
43, 11
               

               
Conread position:
               
233-559
               

               
Cow position:
               
chr24:41980473-41980794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
11, 79
               

               
Conread position:
               
233-590
               

               
Cow position:
               
chr24:31159816-31159451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
9, 197
               

               
Conread position:
               
233-626
               

               
Cow position:
               
chr24:20225929-20225538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
116, 79
               

               
Conread position:
               
234-517
               

               
Cow position:
               
chr24:27285008-27284732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
39, 78
               

               
Conread position:
               
234-523
               

               
Cow position:
               
chr24:13948307-13948027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
14, 79
               

               
Conread position:
               
234-622
               

               
Cow position:
               
chr24:15861405-15861801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
8, 45
               

               
Conread position:
               
236-446
               

               
Cow position:
               
chr24:18302897-18302695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
236-616
               

               
Cow position:
               
chr24:19179254-19179638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
44, 76
               

               
Conread position:
               
237-423
               

               
Cow position:
               
chr24:24091153-24091336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
38, 71
               

               
Conread position:
               
237-450
               

               
Cow position:
               
chr24:36775590-36775800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
37, 60
               

               
Conread position:
               
237-536
               

               
Cow position:
               
chr24:37974802-37975088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
37, 76
               

               
Conread position:
               
237-626
               

               
Cow position:
               
chr24:43371424-43371049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
237-632
               

               
Cow position:
               
chr24:30313847-30314241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 72
               

               
Conread position:
               
238-613
               

               
Cow position:
               
chr24:17104392-17104760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 71
               

               
Conread position:
               
238-616
               

               
Cow position:
               
chr24:3494061-3493699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 77
               

               
Conread position:
               
238-626
               

               
Cow position:
               
chr24:28063130-28062749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 62
               

               
Conread position:
               
239-520
               

               
Cow position:
               
chr24:27348997-27349271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
254, 15
               

               
Conread position:
               
239-533
               

               
Cow position:
               
chr24:43537138-43536847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
105, 42
               

               
Conread position:
               
239-590
               

               
Cow position:
               
chr24:18356877-18357219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 24
               

               
Conread position:
               
239-609
               

               
Cow position:
               
chr24:27725829-27726199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 43
               

               
Conread position:
               
239-622
               

               
Cow position:
               
chr24:18731929-18732321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
212, 33
               

               
Conread position:
               
239-626
               

               
Cow position:
               
chr24:7914189-7913799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
8, 114
               

               
Conread position:
               
239-629
               

               
Cow position:
               
chr24:2675515-2675123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
33, 229
               

               
Conread position:
               
239-646
               

               
Cow position:
               
chr24:10499397-10498989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 73
               

               
Conread position:
               
240-420
               

               
Cow position:
               
chr24:34772124-34772306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
35, 103
               

               
Conread position:
               
240-569
               

               
Cow position:
               
chr24:11840373-11840044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 42
               

               
Conread position:
               
240-616
               

               
Cow position:
               
chr24:24457064-24457439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
321, 85
               

               
Conread position:
               
240-626
               

               
Cow position:
               
chr24:17311051-17311408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 34
               

               
Conread position:
               
242-420
               

               
Cow position:
               
chr24:31822766-31822583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
242-429
               

               
Cow position:
               
chr24:19889781-19889968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
31, 143
               

               
Conread position:
               
242-626
               

               
Cow position:
               
chr24:20801169-20801543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
32, 70
               

               
Conread position:
               
243-528
               

               
Cow position:
               
chr24:41406069-41405798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
108, 34
               

               
Conread position:
               
243-560
               

               
Cow position:
               
chr24:29605858-29606176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
255, 31
               

               
Conread position:
               
243-615
               

               
Cow position:
               
chr24:28690861-28690499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
291, 34
               

               
Conread position:
               
243-616
               

               
Cow position:
               
chr24:15373603-15373216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
28, 239
               

               
Conread position:
               
243-626
               

               
Cow position:
               
chr24:22079638-22079257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
32, 86
               

               
Conread position:
               
243-638
               

               
Cow position:
               
chr24:18474554-18474959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
29, 63
               

               
Conread position:
               
244-428
               

               
Cow position:
               
chr24:21887277-21887459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
244-616
               

               
Cow position:
               
chr24:33153976-33153589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 201
               

               
Conread position:
               
245-613
               

               
Cow position:
               
chr24:25884975-25885350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
30, 66
               

               
Conread position:
               
245-616
               

               
Cow position:
               
chr24:33944579-33944211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
42, 69
               

               
Conread position:
               
246-529
               

               
Cow position:
               
chr24:28043164-28042872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 5
               

               
Conread position:
               
246-626
               

               
Cow position:
               
chr24:19465737-19466133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
240, 28
               

               
Conread position:
               
247-559
               

               
Cow position:
               
chr24:18313746-18314082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
28, 227
               

               
Conread position:
               
247-616
               

               
Cow position:
               
chr24:37650846-37650477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 63
               

               
Conread position:
               
247-626
               

               
Cow position:
               
chr24:18374935-18374575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
25, 64
               

               
Conread position:
               
247-639
               

               
Cow position:
               
chr24:29595629-29596027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
28, 68
               

               
Conread position:
               
248-626
               

               
Cow position:
               
chr24:29539760-29540110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
30, 64
               

               
Conread position:
               
249-622
               

               
Cow position:
               
chr24:43200088-43200473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
28, 180
               

               
Conread position:
               
251-520
               

               
Cow position:
               
chr24:25122504-25122262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 61
               

               
Conread position:
               
251-559
               

               
Cow position:
               
chr24:17751941-17752244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
24, 86
               

               
Conread position:
               
255-604
               

               
Cow position:
               
chr24:18741402-18741752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 60
               

               
Conread position:
               
265-516
               

               
Cow position:
               
chr24:6912208-6912455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
210, 20
               

               
Conread position:
               
308-626
               

               
Cow position:
               
chr24:34008453-34008780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
43, 323
               

               
Conread position:
               
311-590
               

               
Cow position:
               
chr24:23186803-23187083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 150
               

               
Conread position:
               
313-609
               

               
Cow position:
               
chr24:26554478-26554787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
35, 203
               

               
Conread position:
               
313-624
               

               
Cow position:
               
chr24:2402255-2402573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 32
               

               
Conread position:
               
315-609
               

               
Cow position:
               
chr24:28326969-28327269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
175, 107
               

               
Conread position:
               
320-598
               

               
Cow position:
               
chr24:19736231-19736502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
169, 24
               

               
Conread position:
               
321-557
               

               
Cow position:
               
chr24:14457619-14457853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
209, 93
               

               
Conread position:
               
324-590
               

               
Cow position:
               
chr24:24061699-24061968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 84
               

               
Conread position:
               
325-626
               

               
Cow position:
               
chr24:31816683-31816386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
29, 197
               

               
Conread position:
               
327-518
               

               
Cow position:
               
chr24:17375742-17375560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 124
               

               
Conread position:
               
327-554
               

               
Cow position:
               
chr24:29561470-29561701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
329-560
               

               
Cow position:
               
chr24:27418003-27418231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
24, 64
               

               
Conread position:
               
330-621
               

               
Cow position:
               
chr24:31036448-31036154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
14, 97
               

               
Conread position:
               
331-491
               

               
Cow position:
               
chr24:28344487-28344321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
53, 136
               

               
Conread position:
               
331-630
               

               
Cow position:
               
chr24:201541-201838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 175
               

               
Conread position:
               
332-555
               

               
Cow position:
               
chr24:8887005-8886788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
110, 138
               

               
Conread position:
               
333-518
               

               
Cow position:
               
chr24:175400-175586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
18, 56
               

               
Conread position:
               
334-622
               

               
Cow position:
               
chr24:27824558-27824264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
19, 211
               

               
Conread position:
               
335-449
               

               
Cow position:
               
chr24:40983222-40983109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
335-511
               

               
Cow position:
               
chr24:18442466-18442643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 83
               

               
Conread position:
               
335-622
               

               
Cow position:
               
chr24:35675639-35675348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
16, 145
               

               
Conread position:
               
335-626
               

               
Cow position:
               
chr24:39483567-39483274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 13
               

               
Conread position:
               
335-629
               

               
Cow position:
               
chr24:24755540-24755243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
18, 151
               

               
Conread position:
               
335-631
               

               
Cow position:
               
chr24:6131778-6132081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
20, 83
               

               
Conread position:
               
339-626
               

               
Cow position:
               
chr24:3430820-3430535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
191, 9
               

               
Conread position:
               
341-477
               

               
Cow position:
               
chr24:21834871-21835010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
342-630
               

               
Cow position:
               
chr24:36404059-36404351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 40
               

               
Conread position:
               
344-626
               

               
Cow position:
               
chr24:31812272-31811985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
185, 0
               

               
Conread position:
               
348-502
               

               
Cow position:
               
chr24:41916338-41916181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 146
               

               
Conread position:
               
348-506
               

               
Cow position:
               
chr24:18968927-18968774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
348-590
               

               
Cow position:
               
chr24:1269862-1269632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
225, 66
               

               
Conread position:
               
348-607
               

               
Cow position:
               
chr24:33221853-33222126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
43, 119
               

               
Conread position:
               
348-609
               

               
Cow position:
               
chr24:41423682-41423423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
185, 68
               

               
Conread position:
               
348-609
               

               
Cow position:
               
chr24:43364437-43364173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
136, 60
               

               
Conread position:
               
348-616
               

               
Cow position:
               
chr24:45005027-45004765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
6, 23
               

               
Conread position:
               
348-626
               

               
Cow position:
               
chr24:2095803-2096088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
92, 261
               

               
Conread position:
               
348-626
               

               
Cow position:
               
chr24:29673600-29673320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
182, 18
               

               
Conread position:
               
348-626
               

               
Cow position:
               
chr24:33723766-33724050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
30, 81
               

               
Conread position:
               
348-632
               

               
Cow position:
               
chr24:18024895-18025177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
174, 68
               

               
Conread position:
               
350-446
               

               
Cow position:
               
chr24:12656972-12657068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
350-484
               

               
Cow position:
               
chr24:6723844-6723710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
18, 9
               

               
Conread position:
               
350-486
               

               
Cow position:
               
chr24:33244472-33244337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
350-487
               

               
Cow position:
               
chr24:42981685-42981819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
350-525
               

               
Cow position:
               
chr24:20807611-20807439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
350-528
               

               
Cow position:
               
chr24:34496198-34496019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
116, 127
               

               
Conread position:
               
350-530
               

               
Cow position:
               
chr24:30308481-30308658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
128, 23
               

               
Conread position:
               
350-536
               

               
Cow position:
               
chr24:20364333-20364518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
100, 109
               

               
Conread position:
               
350-554
               

               
Cow position:
               
chr24:32095384-32095193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
350-557
               

               
Cow position:
               
chr24:13353116-13352914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
350-559
               

               
Cow position:
               
chr24:27713328-27713536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
182, 0
               

               
Conread position:
               
350-560
               

               
Cow position:
               
chr24:28234119-28233916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
180, 64
               

               
Conread position:
               
350-569
               

               
Cow position:
               
chr24:27290947-27290729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
350-579
               

               
Cow position:
               
chr24:43967427-43967656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
180, 36
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:18970431-18970674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
94, 78
               

               
Conread position:
               
350-590
               

               
Cow position:
               
chr24:35576463-35576701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
178, 24
               

               
Conread position:
               
350-600
               

               
Cow position:
               
chr24:37037979-37037723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
48, 103
               

               
Conread position:
               
350-605
               

               
Cow position:
               
chr24:16895359-16895618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
8, 135
               

               
Conread position:
               
350-607
               

               
Cow position:
               
chr24:29063582-29063832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
223, 60
               

               
Conread position:
               
350-608
               

               
Cow position:
               
chr24:17860181-17860440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
135, 181
               

               
Conread position:
               
350-609
               

               
Cow position:
               
chr24:16510054-16509784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
350-609
               

               
Cow position:
               
chr24:34742830-34742569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
93, 129
               

               
Conread position:
               
350-610
               

               
Cow position:
               
chr24:17294122-17294378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
180, 16
               

               
Conread position:
               
350-611
               

               
Cow position:
               
chr24:32071038-32070778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
179, 66
               

               
Conread position:
               
350-614
               

               
Cow position:
               
chr24:24490941-24491201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 32
               

               
Conread position:
               
350-614
               

               
Cow position:
               
chr24:28319132-28319391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
121, 133
               

               
Conread position:
               
350-616
               

               
Cow position:
               
chr24:15246566-15246828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
131, 161
               

               
Conread position:
               
350-622
               

               
Cow position:
               
chr24:23694824-23695092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 129
               

               
Conread position:
               
350-622
               

               
Cow position:
               
chr24:27748717-27748449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
223, 135
               

               
Conread position:
               
350-622
               

               
Cow position:
               
chr24:43927256-43927517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
223, 65
               

               
Conread position:
               
350-624
               

               
Cow position:
               
chr24:5754912-5754641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 21
               

               
Conread position:
               
350-625
               

               
Cow position:
               
chr24:17955368-17955645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
180, 67
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr24:7000987-7001267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
52, 35
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr24:15057472-15057203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
180, 61
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr24:20874758-20874477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
104, 43
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr24:27844451-27844719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 109
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr24:28496505-28496786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 158
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr24:31324361-31324080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 27
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr24:39227071-39226799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
143, 64
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr24:39849812-39850078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
249, 65
               

               
Conread position:
               
350-629
               

               
Cow position:
               
chr24:352530-352811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
182, 50
               

               
Conread position:
               
350-637
               

               
Cow position:
               
chr24:30897461-30897753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 9
               

               
Conread position:
               
350-639
               

               
Cow position:
               
chr24:29679236-29679522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
214, 59
               

               
Conread position:
               
351-484
               

               
Cow position:
               
chr24:29984908-29985040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
351-570
               

               
Cow position:
               
chr24:8006382-8006168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
181, 18
               

               
Conread position:
               
351-613
               

               
Cow position:
               
chr24:24250798-24250538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
124, 71
               

               
Conread position:
               
351-613
               

               
Cow position:
               
chr24:33465545-33465795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
220, 49
               

               
Conread position:
               
351-630
               

               
Cow position:
               
chr24:22225262-22224974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
82, 15
               

               
Conread position:
               
351-632
               

               
Cow position:
               
chr24:31359396-31359117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
359-619
               

               
Cow position:
               
chr24:19769557-19769297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
205, 124
               

               
Conread position:
               
363-626
               

               
Cow position:
               
chr24:20024675-20024408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
167, 26
               

               
Conread position:
               
363-626
               

               
Cow position:
               
chr24:32822707-32822982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
364-511
               

               
Cow position:
               
chr24:44145641-44145497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
364-603
               

               
Cow position:
               
chr24:43432853-43432612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
166, 76
               

               
Conread position:
               
364-615
               

               
Cow position:
               
chr24:27054474-27054214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
107, 92
               

               
Conread position:
               
364-626
               

               
Cow position:
               
chr24:30229536-30229269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
205, 164
               

               
Conread position:
               
371-614
               

               
Cow position:
               
chr24:29180942-29180698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
159, 43
               

               
Conread position:
               
376-626
               

               
Cow position:
               
chr24:20249845-20250103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
154, 105
               

               
Conread position:
               
377-605
               

               
Cow position:
               
chr24:6150073-6149846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
102, 111
               

               
Conread position:
               
378-626
               

               
Cow position:
               
chr24:212036-211782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
116, 103
               

               
Conread position:
               
385-626
               

               
Cow position:
               
chr24:39143654-39143405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
92, 112
               

               
Conread position:
               
393-626
               

               
Cow position:
               
chr24:6487950-6487720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
180, 23
               

               
Conread position:
               
394-626
               

               
Cow position:
               
chr24:39833482-39833715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
136, 80
               

               
Conread position:
               
417-622
               

               
Cow position:
               
chr24:30178251-30178036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
430-624
               

               
Cow position:
               
chr24:35794738-35794937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
436-629
               

               
Cow position:
               
chr24:29028032-29027844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
94, 48
               

               
Conread position:
               
440-626
               

               
Cow position:
               
chr24:27941026-27941209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
90, 40
               

               
Conread position:
               
460-625
               

               
Cow position:
               
chr24:11734690-11734524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
19, 68
               

               
Conread position:
               
461-626
               

               
Cow position:
               
chr24:11876854-11876684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
28, 144
               
Show alignments to all cow chromosomes.