• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8060L10.5
        

               
Conread position:
               
195-487
               

               
Cow position:
               
chr29:28066722-28066453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
198-525
               

               
Cow position:
               
chr29:20770584-20770270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
286, 21
               

               
Conread position:
               
209-630
               

               
Cow position:
               
chr29:27859022-27858609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
28, 67
               

               
Conread position:
               
218-441
               

               
Cow position:
               
chr29:25288698-25288915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
56, 30
               

               
Conread position:
               
218-613
               

               
Cow position:
               
chr29:32799478-32799879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
25, 98
               

               
Conread position:
               
218-624
               

               
Cow position:
               
chr29:41531073-41530675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
54, 14
               

               
Conread position:
               
218-639
               

               
Cow position:
               
chr29:16609969-16609549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
56, 13
               

               
Conread position:
               
221-528
               

               
Cow position:
               
chr29:22518900-22519206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
28, 54
               

               
Conread position:
               
222-569
               

               
Cow position:
               
chr29:13028671-13028320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
8, 104
               

               
Conread position:
               
223-427
               

               
Cow position:
               
chr29:35070853-35071062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
223-609
               

               
Cow position:
               
chr29:4121072-4120680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
52, 18
               

               
Conread position:
               
223-622
               

               
Cow position:
               
chr29:31929204-31928804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
44, 82
               

               
Conread position:
               
223-626
               

               
Cow position:
               
chr29:11916040-11915640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
26, 52
               

               
Conread position:
               
223-626
               

               
Cow position:
               
chr29:30441158-30440749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
13, 92
               

               
Conread position:
               
224-626
               

               
Cow position:
               
chr29:26275820-26275437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
20, 85
               

               
Conread position:
               
225-528
               

               
Cow position:
               
chr29:20167638-20167346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
226-529
               

               
Cow position:
               
chr29:28840388-28840076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
49, 234
               

               
Conread position:
               
227-626
               

               
Cow position:
               
chr29:25092321-25091932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 91
               

               
Conread position:
               
228-527
               

               
Cow position:
               
chr29:23220277-23220577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
47, 29
               

               
Conread position:
               
228-571
               

               
Cow position:
               
chr29:34358754-34359101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 61
               

               
Conread position:
               
229-509
               

               
Cow position:
               
chr29:31200488-31200198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
229-559
               

               
Cow position:
               
chr29:1008034-1007707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
229-561
               

               
Cow position:
               
chr29:5046865-5046541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
305, 82
               

               
Conread position:
               
229-624
               

               
Cow position:
               
chr29:12680370-12679980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 81
               

               
Conread position:
               
229-626
               

               
Cow position:
               
chr29:5893058-5892670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 80
               

               
Conread position:
               
229-629
               

               
Cow position:
               
chr29:9709905-9709515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 80
               

               
Conread position:
               
231-404
               

               
Cow position:
               
chr29:6033903-6034096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
232-505
               

               
Cow position:
               
chr29:23155442-23155174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
232-560
               

               
Cow position:
               
chr29:1615136-1614815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 82
               

               
Conread position:
               
232-579
               

               
Cow position:
               
chr29:25333234-25333593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
40, 11
               

               
Conread position:
               
232-585
               

               
Cow position:
               
chr29:11647324-11646957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
17, 233
               

               
Conread position:
               
232-622
               

               
Cow position:
               
chr29:17222626-17222236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
13, 66
               

               
Conread position:
               
232-622
               

               
Cow position:
               
chr29:22613630-22613254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 61
               

               
Conread position:
               
233-482
               

               
Cow position:
               
chr29:39038062-39038302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
233-543
               

               
Cow position:
               
chr29:21666293-21665994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 10
               

               
Conread position:
               
233-616
               

               
Cow position:
               
chr29:29769146-29769521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
233-626
               

               
Cow position:
               
chr29:39329374-39329774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
15, 255
               

               
Conread position:
               
233-626
               

               
Cow position:
               
chr29:40097189-40096780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
40, 187
               

               
Conread position:
               
234-449
               

               
Cow position:
               
chr29:15798157-15797952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
234-609
               

               
Cow position:
               
chr29:22175897-22175528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
90, 40
               

               
Conread position:
               
234-616
               

               
Cow position:
               
chr29:25814629-25815002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
39, 9
               

               
Conread position:
               
235-451
               

               
Cow position:
               
chr29:19363913-19363709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 8
               

               
Conread position:
               
235-489
               

               
Cow position:
               
chr29:22734900-22735145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 61
               

               
Conread position:
               
237-433
               

               
Cow position:
               
chr29:28949189-28948990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 179
               

               
Conread position:
               
237-557
               

               
Cow position:
               
chr29:18878279-18878603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
205, 16
               

               
Conread position:
               
237-569
               

               
Cow position:
               
chr29:17297342-17297015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
38, 72
               

               
Conread position:
               
237-588
               

               
Cow position:
               
chr29:36220749-36220386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
13, 99
               

               
Conread position:
               
237-616
               

               
Cow position:
               
chr29:19949509-19949143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 75
               

               
Conread position:
               
238-562
               

               
Cow position:
               
chr29:5063346-5063036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
39, 74
               

               
Conread position:
               
238-626
               

               
Cow position:
               
chr29:36210353-36209988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
37, 86
               

               
Conread position:
               
239-560
               

               
Cow position:
               
chr29:10058341-10058646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
240, 68
               

               
Conread position:
               
239-626
               

               
Cow position:
               
chr29:19762465-19762096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 68
               

               
Conread position:
               
239-626
               

               
Cow position:
               
chr29:25737218-25737592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 15
               

               
Conread position:
               
239-630
               

               
Cow position:
               
chr29:8926248-8926639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 70
               

               
Conread position:
               
240-615
               

               
Cow position:
               
chr29:19125531-19125174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
35, 66
               

               
Conread position:
               
240-624
               

               
Cow position:
               
chr29:11562827-11562440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 259
               

               
Conread position:
               
241-409
               

               
Cow position:
               
chr29:36357328-36357166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
34, 71
               

               
Conread position:
               
241-624
               

               
Cow position:
               
chr29:17110153-17109797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
30, 69
               

               
Conread position:
               
242-447
               

               
Cow position:
               
chr29:36697956-36697759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
242-450
               

               
Cow position:
               
chr29:629736-629537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
242-626
               

               
Cow position:
               
chr29:11705332-11704946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
31, 178
               

               
Conread position:
               
243-420
               

               
Cow position:
               
chr29:21645515-21645342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
32, 96
               

               
Conread position:
               
243-452
               

               
Cow position:
               
chr29:26631247-26631042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
243-485
               

               
Cow position:
               
chr29:26540342-26540576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
32, 69
               

               
Conread position:
               
243-609
               

               
Cow position:
               
chr29:35292302-35291927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
57, 13
               

               
Conread position:
               
243-624
               

               
Cow position:
               
chr29:36531064-36530689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 69
               

               
Conread position:
               
243-626
               

               
Cow position:
               
chr29:26672701-26673082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 131
               

               
Conread position:
               
243-626
               

               
Cow position:
               
chr29:38581190-38580799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
28, 65
               

               
Conread position:
               
243-626
               

               
Cow position:
               
chr29:44378209-44378595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
32, 71
               

               
Conread position:
               
243-629
               

               
Cow position:
               
chr29:24293068-24292687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
244-616
               

               
Cow position:
               
chr29:12783758-12784125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 98
               

               
Conread position:
               
247-449
               

               
Cow position:
               
chr29:15796678-15796486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
247-517
               

               
Cow position:
               
chr29:40874222-40873943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
21, 50
               

               
Conread position:
               
247-626
               

               
Cow position:
               
chr29:4479973-4480352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 56
               

               
Conread position:
               
248-509
               

               
Cow position:
               
chr29:30681510-30681769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 67
               

               
Conread position:
               
248-528
               

               
Cow position:
               
chr29:30548967-30548697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
11, 60
               

               
Conread position:
               
249-518
               

               
Cow position:
               
chr29:44139053-44139312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 87
               

               
Conread position:
               
255-525
               

               
Cow position:
               
chr29:29324234-29324487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 93
               

               
Conread position:
               
260-473
               

               
Cow position:
               
chr29:22723777-22723577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
260-518
               

               
Cow position:
               
chr29:23825031-23825287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
15, 52
               

               
Conread position:
               
263-539
               

               
Cow position:
               
chr29:36952113-36952387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
54, 14
               

               
Conread position:
               
270-478
               

               
Cow position:
               
chr29:34688023-34687806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
304-608
               

               
Cow position:
               
chr29:43251017-43251328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
312-557
               

               
Cow position:
               
chr29:32290750-32290501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
39, 30
               

               
Conread position:
               
313-630
               

               
Cow position:
               
chr29:27589060-27588739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 138
               

               
Conread position:
               
317-590
               

               
Cow position:
               
chr29:10156173-10156448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
29, 72
               

               
Conread position:
               
319-519
               

               
Cow position:
               
chr29:38978660-38978462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
319-622
               

               
Cow position:
               
chr29:13639235-13639544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
32, 192
               

               
Conread position:
               
323-626
               

               
Cow position:
               
chr29:43099618-43099922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
25, 166
               

               
Conread position:
               
325-539
               

               
Cow position:
               
chr29:7624307-7624087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
18, 77
               

               
Conread position:
               
325-571
               

               
Cow position:
               
chr29:35084099-35084344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
205, 23
               

               
Conread position:
               
327-639
               

               
Cow position:
               
chr29:28166095-28166406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
15, 99
               

               
Conread position:
               
335-626
               

               
Cow position:
               
chr29:28196894-28197184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
8, 26
               

               
Conread position:
               
337-610
               

               
Cow position:
               
chr29:17154891-17154603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
7, 80
               

               
Conread position:
               
337-613
               

               
Cow position:
               
chr29:22162136-22162422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
337-638
               

               
Cow position:
               
chr29:5098654-5098949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
186, 131
               

               
Conread position:
               
339-609
               

               
Cow position:
               
chr29:4520447-4520172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
5, 9
               

               
Conread position:
               
339-622
               

               
Cow position:
               
chr29:45005518-45005799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 100
               

               
Conread position:
               
342-518
               

               
Cow position:
               
chr29:32176782-32176613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
342-518
               

               
Cow position:
               
chr29:38979965-38980137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 129
               

               
Conread position:
               
342-600
               

               
Cow position:
               
chr29:39111205-39111468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
157, 45
               

               
Conread position:
               
342-626
               

               
Cow position:
               
chr29:36217222-36216941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
11, 75
               

               
Conread position:
               
342-631
               

               
Cow position:
               
chr29:10235028-10235311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
125, 7
               

               
Conread position:
               
347-622
               

               
Cow position:
               
chr29:22778071-22778354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
30, 69
               

               
Conread position:
               
347-626
               

               
Cow position:
               
chr29:1022398-1022113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
185, 133
               

               
Conread position:
               
347-629
               

               
Cow position:
               
chr29:39567784-39567504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
184, 74
               

               
Conread position:
               
348-571
               

               
Cow position:
               
chr29:4002993-4002775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
70, 162
               

               
Conread position:
               
348-619
               

               
Cow position:
               
chr29:9912276-9911999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
135, 18
               

               
Conread position:
               
348-619
               

               
Cow position:
               
chr29:19428761-19428485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 23
               

               
Conread position:
               
348-622
               

               
Cow position:
               
chr29:29057276-29057003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
212, 75
               

               
Conread position:
               
348-626
               

               
Cow position:
               
chr29:1325540-1325261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
113, 73
               

               
Conread position:
               
348-626
               

               
Cow position:
               
chr29:28195420-28195693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
183, 73
               

               
Conread position:
               
348-632
               

               
Cow position:
               
chr29:26615616-26615907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 143
               

               
Conread position:
               
350-474
               

               
Cow position:
               
chr29:742550-742674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
350-479
               

               
Cow position:
               
chr29:17804633-17804505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
350-511
               

               
Cow position:
               
chr29:21285458-21285300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
350-526
               

               
Cow position:
               
chr29:22028856-22029032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
100, 64
               

               
Conread position:
               
350-526
               

               
Cow position:
               
chr29:41112782-41112949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
350-534
               

               
Cow position:
               
chr29:18012657-18012472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
350-553
               

               
Cow position:
               
chr29:24578962-24578755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
350-557
               

               
Cow position:
               
chr29:6015225-6015015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
94, 134
               

               
Conread position:
               
350-557
               

               
Cow position:
               
chr29:12625877-12626086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
140, 131
               

               
Conread position:
               
350-559
               

               
Cow position:
               
chr29:847543-847750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 83
               

               
Conread position:
               
350-571
               

               
Cow position:
               
chr29:29176518-29176736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
178, 68
               

               
Conread position:
               
350-585
               

               
Cow position:
               
chr29:27329991-27329754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
178, 13
               

               
Conread position:
               
350-588
               

               
Cow position:
               
chr29:2056160-2055916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
184, 0
               

               
Conread position:
               
350-611
               

               
Cow position:
               
chr29:26416450-26416195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
135, 64
               

               
Conread position:
               
350-616
               

               
Cow position:
               
chr29:34773637-34773904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
31, 112
               

               
Conread position:
               
350-622
               

               
Cow position:
               
chr29:11434218-11433945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
178, 126
               

               
Conread position:
               
350-622
               

               
Cow position:
               
chr29:23243779-23244057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 110
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr29:463553-463830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 183
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr29:1229706-1229431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
149, 110
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr29:2984989-2984708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
101, 54
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr29:11053761-11054031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
156, 71
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr29:17409434-17409154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
178, 131
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr29:17607515-17607240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
212, 22
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr29:20903191-20903464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 98
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr29:26778981-26778708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
66, 83
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr29:28446157-28446436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
162, 38
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr29:32210972-32211236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
223, 61
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr29:35501555-35501825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
169, 132
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr29:38582067-38581791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
180, 78
               

               
Conread position:
               
350-626
               

               
Cow position:
               
chr29:40117670-40117392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 43
               

               
Conread position:
               
350-630
               

               
Cow position:
               
chr29:1557030-1556752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
180, 111
               

               
Conread position:
               
350-630
               

               
Cow position:
               
chr29:42363917-42364199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
51, 10
               

               
Conread position:
               
350-637
               

               
Cow position:
               
chr29:4874781-4875084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 32
               

               
Conread position:
               
350-646
               

               
Cow position:
               
chr29:43328743-43328440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
106, 114
               

               
Conread position:
               
351-448
               

               
Cow position:
               
chr29:36781206-36781303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
98
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
351-479
               

               
Cow position:
               
chr29:22032542-22032671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
34, 102
               

               
Conread position:
               
351-559
               

               
Cow position:
               
chr29:21941698-21941490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
179, 15
               

               
Conread position:
               
351-613
               

               
Cow position:
               
chr29:31943967-31943696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
6, 140
               

               
Conread position:
               
351-624
               

               
Cow position:
               
chr29:16657794-16657510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
97, 31
               

               
Conread position:
               
351-626
               

               
Cow position:
               
chr29:5186395-5186675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 207
               

               
Conread position:
               
352-590
               

               
Cow position:
               
chr29:44008688-44008925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
195, 47
               

               
Conread position:
               
352-626
               

               
Cow position:
               
chr29:23983858-23984139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 0
               

               
Conread position:
               
352-639
               

               
Cow position:
               
chr29:24624345-24624059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
135, 36
               

               
Conread position:
               
354-544
               

               
Cow position:
               
chr29:18085667-18085478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
182, 0
               

               
Conread position:
               
354-626
               

               
Cow position:
               
chr29:43008989-43009261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
176, 110
               

               
Conread position:
               
364-626
               

               
Cow position:
               
chr29:86926-87198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
364-626
               

               
Cow position:
               
chr29:15940545-15940813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
117, 200
               

               
Conread position:
               
364-626
               

               
Cow position:
               
chr29:26653959-26654217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
204, 70
               

               
Conread position:
               
365-629
               

               
Cow position:
               
chr29:2744183-2744455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
367-622
               

               
Cow position:
               
chr29:44682022-44682273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
206, 84
               

               
Conread position:
               
368-538
               

               
Cow position:
               
chr29:20924987-20924817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
166, 120
               

               
Conread position:
               
368-559
               

               
Cow position:
               
chr29:29795301-29795494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
368-615
               

               
Cow position:
               
chr29:29942646-29942902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
368-626
               

               
Cow position:
               
chr29:14501674-14501414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
196, 113
               

               
Conread position:
               
371-562
               

               
Cow position:
               
chr29:36427335-36427516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
159, 80
               

               
Conread position:
               
374-600
               

               
Cow position:
               
chr29:29314577-29314808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
374-623
               

               
Cow position:
               
chr29:40166319-40166068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
91, 83
               

               
Conread position:
               
374-626
               

               
Cow position:
               
chr29:24103466-24103725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
100, 48
               

               
Conread position:
               
376-611
               

               
Cow position:
               
chr29:31674706-31674465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
376-626
               

               
Cow position:
               
chr29:29975111-29974864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
148, 96
               

               
Conread position:
               
378-613
               

               
Cow position:
               
chr29:10018650-10018407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
152, 166
               

               
Conread position:
               
378-626
               

               
Cow position:
               
chr29:22068669-22068924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
107, 225
               

               
Conread position:
               
379-537
               

               
Cow position:
               
chr29:31477043-31477201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 95
               

               
Conread position:
               
402-631
               

               
Cow position:
               
chr29:11135849-11136072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
171, 27
               

               
Conread position:
               
404-608
               

               
Cow position:
               
chr29:1124700-1124495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
83, 63
               

               
Conread position:
               
409-585
               

               
Cow position:
               
chr29:31594087-31594268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
85, 74
               

               
Conread position:
               
456-639
               

               
Cow position:
               
chr29:21000640-21000451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 182
               

               
Conread position:
               
458-626
               

               
Cow position:
               
chr29:8125597-8125771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
480-626
               

               
Cow position:
               
chr29:7040871-7041015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
11, 56
               
Show alignments to all cow chromosomes.