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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8061H12.3
        

               
Conread position:
               
307-569
               

               
Cow position:
               
chr15:26529751-26530000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
13, 24
               

               
Conread position:
               
317-681
               

               
Cow position:
               
chr15:5726175-5726552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
321-561
               

               
Cow position:
               
chr15:50332843-50333082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 28
               

               
Conread position:
               
325-680
               

               
Cow position:
               
chr15:49273833-49274178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 44
               

               
Conread position:
               
326-681
               

               
Cow position:
               
chr15:41225698-41225337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
327-608
               

               
Cow position:
               
chr15:22984439-22984725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
327-665
               

               
Cow position:
               
chr15:23780198-23779860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
109, 79
               

               
Conread position:
               
330-681
               

               
Cow position:
               
chr15:608019-608374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
50, 39
               

               
Conread position:
               
334-681
               

               
Cow position:
               
chr15:10088195-10088547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
15, 84
               

               
Conread position:
               
334-681
               

               
Cow position:
               
chr15:16583812-16583478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
240, 36
               

               
Conread position:
               
335-673
               

               
Cow position:
               
chr15:21893661-21894001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
34, 81
               

               
Conread position:
               
335-680
               

               
Cow position:
               
chr15:22531554-22531883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
38, 81
               

               
Conread position:
               
335-681
               

               
Cow position:
               
chr15:1083489-1083148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
44, 34
               

               
Conread position:
               
335-681
               

               
Cow position:
               
chr15:5072217-5071872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
34, 203
               

               
Conread position:
               
335-681
               

               
Cow position:
               
chr15:11658703-11658341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
14, 35
               

               
Conread position:
               
335-681
               

               
Cow position:
               
chr15:21420828-21421171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
202, 31
               

               
Conread position:
               
335-681
               

               
Cow position:
               
chr15:36353547-36353896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
29, 83
               

               
Conread position:
               
335-681
               

               
Cow position:
               
chr15:36391551-36391905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
14, 35
               

               
Conread position:
               
335-684
               

               
Cow position:
               
chr15:2968215-2968567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
34, 96
               

               
Conread position:
               
336-571
               

               
Cow position:
               
chr15:50660484-50660736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
336-658
               

               
Cow position:
               
chr15:23572810-23572481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 36
               

               
Conread position:
               
336-680
               

               
Cow position:
               
chr15:6969873-6970209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
43, 8
               

               
Conread position:
               
336-681
               

               
Cow position:
               
chr15:10246117-10245778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
16, 37
               

               
Conread position:
               
336-681
               

               
Cow position:
               
chr15:26896817-26896487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
33, 68
               

               
Conread position:
               
336-681
               

               
Cow position:
               
chr15:35641894-35642248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
46, 33
               

               
Conread position:
               
337-518
               

               
Cow position:
               
chr15:17227046-17226864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 33
               

               
Conread position:
               
337-600
               

               
Cow position:
               
chr15:31024857-31025138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
32, 199
               

               
Conread position:
               
337-604
               

               
Cow position:
               
chr15:19554043-19553772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 78
               

               
Conread position:
               
337-681
               

               
Cow position:
               
chr15:37381512-37381855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
45, 32
               

               
Conread position:
               
339-520
               

               
Cow position:
               
chr15:12913614-12913437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 66
               

               
Conread position:
               
339-681
               

               
Cow position:
               
chr15:244667-245004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
49, 30
               

               
Conread position:
               
344-681
               

               
Cow position:
               
chr15:1330219-1329875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
345-570
               

               
Cow position:
               
chr15:31637186-31637412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
345-681
               

               
Cow position:
               
chr15:45584613-45584949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
346-680
               

               
Cow position:
               
chr15:20459419-20459073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
27, 69
               

               
Conread position:
               
346-680
               

               
Cow position:
               
chr15:22553649-22553316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
346-681
               

               
Cow position:
               
chr15:21822035-21821697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
27, 86
               

               
Conread position:
               
347-535
               

               
Cow position:
               
chr15:5522840-5523034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
347-556
               

               
Cow position:
               
chr15:4500591-4500802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
347-675
               

               
Cow position:
               
chr15:49922028-49922362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
26, 67
               

               
Conread position:
               
347-680
               

               
Cow position:
               
chr15:17353768-17353421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 122
               

               
Conread position:
               
347-681
               

               
Cow position:
               
chr15:25208866-25208541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
347-681
               

               
Cow position:
               
chr15:39599342-39599669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 26
               

               
Conread position:
               
347-681
               

               
Cow position:
               
chr15:43626357-43626696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 69
               

               
Conread position:
               
347-684
               

               
Cow position:
               
chr15:4418509-4418170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
32, 22
               

               
Conread position:
               
348-621
               

               
Cow position:
               
chr15:17162072-17162360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
348-629
               

               
Cow position:
               
chr15:41528072-41527802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
222, 21
               

               
Conread position:
               
348-649
               

               
Cow position:
               
chr15:36793598-36793297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
223, 21
               

               
Conread position:
               
348-650
               

               
Cow position:
               
chr15:4919176-4918870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
348-658
               

               
Cow position:
               
chr15:31929004-31928694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
64, 22
               

               
Conread position:
               
348-673
               

               
Cow position:
               
chr15:30471085-30470750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
348-675
               

               
Cow position:
               
chr15:19771031-19771355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
348-675
               

               
Cow position:
               
chr15:20391383-20391055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
33, 22
               

               
Conread position:
               
348-675
               

               
Cow position:
               
chr15:21941954-21941625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
21, 57
               

               
Conread position:
               
348-675
               

               
Cow position:
               
chr15:30047660-30047321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
21, 103
               

               
Conread position:
               
348-675
               

               
Cow position:
               
chr15:40798524-40798207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
226, 21
               

               
Conread position:
               
348-675
               

               
Cow position:
               
chr15:43827878-43827552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
348-679
               

               
Cow position:
               
chr15:22938873-22938544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr15:286366-286706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
24, 91
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr15:11996134-11995798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr15:12722978-12723315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
25, 81
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr15:16667604-16667275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr15:26912174-26911851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
225, 22
               

               
Conread position:
               
348-684
               

               
Cow position:
               
chr15:28823918-28823588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
31, 22
               

               
Conread position:
               
349-658
               

               
Cow position:
               
chr15:5683032-5683345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
30, 21
               

               
Conread position:
               
349-673
               

               
Cow position:
               
chr15:225908-225586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
349-681
               

               
Cow position:
               
chr15:32324313-32323977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
349-681
               

               
Cow position:
               
chr15:53716329-53716660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
24, 80
               

               
Conread position:
               
349-684
               

               
Cow position:
               
chr15:22939429-22939094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 59
               

               
Conread position:
               
350-581
               

               
Cow position:
               
chr15:15154195-15154423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
350-681
               

               
Cow position:
               
chr15:85350-85021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 71
               

               
Conread position:
               
351-681
               

               
Cow position:
               
chr15:4138031-4138361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
352-595
               

               
Cow position:
               
chr15:20950150-20950392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
17, 53
               

               
Conread position:
               
353-547
               

               
Cow position:
               
chr15:29793303-29793105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
26, 16
               

               
Conread position:
               
356-675
               

               
Cow position:
               
chr15:10512360-10512049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
226, 10
               

               
Conread position:
               
360-682
               

               
Cow position:
               
chr15:10608403-10608077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
78, 9
               

               
Conread position:
               
381-556
               

               
Cow position:
               
chr15:23913129-23912954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
58, 30
               

               
Conread position:
               
381-567
               

               
Cow position:
               
chr15:39520087-39520276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
381-582
               

               
Cow position:
               
chr15:52432268-52432469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
158, 31
               

               
Conread position:
               
381-631
               

               
Cow position:
               
chr15:38652673-38652439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
53, 31
               

               
Conread position:
               
381-646
               

               
Cow position:
               
chr15:9465604-9465870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
212, 21
               

               
Conread position:
               
381-651
               

               
Cow position:
               
chr15:38935334-38935605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
42, 57
               

               
Conread position:
               
381-657
               

               
Cow position:
               
chr15:34284480-34284208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
99, 21
               

               
Conread position:
               
381-658
               

               
Cow position:
               
chr15:5158301-5158579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
61, 31
               

               
Conread position:
               
381-675
               

               
Cow position:
               
chr15:4485078-4485363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
275, 48
               

               
Conread position:
               
381-675
               

               
Cow position:
               
chr15:17196075-17196363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
172, 31
               

               
Conread position:
               
381-677
               

               
Cow position:
               
chr15:52482899-52482606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
191, 42
               

               
Conread position:
               
381-677
               

               
Cow position:
               
chr15:53163950-53164243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
191, 42
               

               
Conread position:
               
381-680
               

               
Cow position:
               
chr15:38883072-38883379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
161, 52
               

               
Conread position:
               
381-681
               

               
Cow position:
               
chr15:6462563-6462269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
192, 30
               

               
Conread position:
               
381-681
               

               
Cow position:
               
chr15:23275463-23275762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
61, 209
               

               
Conread position:
               
381-681
               

               
Cow position:
               
chr15:38837674-38837974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
205, 48
               

               
Conread position:
               
381-684
               

               
Cow position:
               
chr15:17762838-17763138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
189, 30
               

               
Conread position:
               
381-684
               

               
Cow position:
               
chr15:26903123-26903427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
193, 28
               

               
Conread position:
               
381-684
               

               
Cow position:
               
chr15:28924828-28924532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
276, 30
               

               
Conread position:
               
383-671
               

               
Cow position:
               
chr15:4295691-4295982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
190, 41
               

               
Conread position:
               
383-682
               

               
Cow position:
               
chr15:24284907-24285210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
51, 31
               

               
Conread position:
               
384-681
               

               
Cow position:
               
chr15:13554280-13554582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 42
               

               
Conread position:
               
385-684
               

               
Cow position:
               
chr15:39621265-39621575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
187, 48
               

               
Conread position:
               
386-681
               

               
Cow position:
               
chr15:24031132-24031414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
276, 16
               

               
Conread position:
               
386-681
               

               
Cow position:
               
chr15:53045949-53045651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr15:915915-915618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 71
               

               
Conread position:
               
390-681
               

               
Cow position:
               
chr15:20487271-20486985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 47
               

               
Conread position:
               
393-679
               

               
Cow position:
               
chr15:24411353-24411639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
10, 47
               

               
Conread position:
               
397-681
               

               
Cow position:
               
chr15:41620246-41619959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
181, 22
               

               
Conread position:
               
407-565
               

               
Cow position:
               
chr15:10431759-10431919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
407-571
               

               
Cow position:
               
chr15:44280049-44280214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
407-616
               

               
Cow position:
               
chr15:6427684-6427468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 75
               

               
Conread position:
               
407-676
               

               
Cow position:
               
chr15:39316895-39316612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
407-681
               

               
Cow position:
               
chr15:12870919-12870636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
407-681
               

               
Cow position:
               
chr15:22871561-22871834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
35, 76
               

               
Conread position:
               
407-681
               

               
Cow position:
               
chr15:34207240-34206961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
35, 123
               

               
Conread position:
               
408-658
               

               
Cow position:
               
chr15:12358983-12359240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
408-681
               

               
Cow position:
               
chr15:21389215-21388940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 106
               

               
Conread position:
               
408-681
               

               
Cow position:
               
chr15:36782381-36782100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
33, 63
               

               
Conread position:
               
411-681
               

               
Cow position:
               
chr15:29604745-29604488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
412-559
               

               
Cow position:
               
chr15:40309346-40309491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
414-674
               

               
Cow position:
               
chr15:2799933-2800183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
23, 96
               

               
Conread position:
               
415-571
               

               
Cow position:
               
chr15:36388246-36388403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
415-573
               

               
Cow position:
               
chr15:4248104-4248262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
415-632
               

               
Cow position:
               
chr15:5044518-5044304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
155, 18
               

               
Conread position:
               
415-675
               

               
Cow position:
               
chr15:7535700-7535444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
19, 159
               

               
Conread position:
               
415-675
               

               
Cow position:
               
chr15:39405698-39405953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
12, 92
               

               
Conread position:
               
415-678
               

               
Cow position:
               
chr15:12655960-12655690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
158, 146
               

               
Conread position:
               
415-681
               

               
Cow position:
               
chr15:19402962-19403209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
241, 18
               

               
Conread position:
               
415-681
               

               
Cow position:
               
chr15:35945486-35945753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
27, 14
               

               
Conread position:
               
416-635
               

               
Cow position:
               
chr15:32977889-32977664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
154, 208
               

               
Conread position:
               
416-652
               

               
Cow position:
               
chr15:21166468-21166218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
154, 183
               

               
Conread position:
               
416-681
               

               
Cow position:
               
chr15:20422821-20422551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
157, 104
               

               
Conread position:
               
416-681
               

               
Cow position:
               
chr15:20482888-20482613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
155, 10
               

               
Conread position:
               
417-672
               

               
Cow position:
               
chr15:26573337-26573597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
17, 40
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr15:24982222-24981967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
27, 121
               

               
Conread position:
               
418-648
               

               
Cow position:
               
chr15:43788218-43788446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
18, 93
               

               
Conread position:
               
418-681
               

               
Cow position:
               
chr15:9106994-9107264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
152, 48
               

               
Conread position:
               
418-681
               

               
Cow position:
               
chr15:50302142-50302411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 73
               

               
Conread position:
               
419-681
               

               
Cow position:
               
chr15:5535716-5535985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
22, 13
               

               
Conread position:
               
419-681
               

               
Cow position:
               
chr15:47844134-47843883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 154
               

               
Conread position:
               
420-605
               

               
Cow position:
               
chr15:38827366-38827173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
420-679
               

               
Cow position:
               
chr15:14020446-14020698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
420-679
               

               
Cow position:
               
chr15:16543492-16543232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 28
               

               
Conread position:
               
420-681
               

               
Cow position:
               
chr15:1722892-1722623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 188
               

               
Conread position:
               
420-681
               

               
Cow position:
               
chr15:22531030-22531289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
23, 97
               

               
Conread position:
               
420-681
               

               
Cow position:
               
chr15:23798573-23798296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
420-681
               

               
Cow position:
               
chr15:30981900-30982152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
20, 9
               

               
Conread position:
               
420-681
               

               
Cow position:
               
chr15:35112926-35112650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 41
               

               
Conread position:
               
421-665
               

               
Cow position:
               
chr15:5717674-5717922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
21, 46
               

               
Conread position:
               
421-681
               

               
Cow position:
               
chr15:16307382-16307640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
20, 154
               

               
Conread position:
               
421-681
               

               
Cow position:
               
chr15:50322556-50322823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
422-679
               

               
Cow position:
               
chr15:27973255-27972989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
422-684
               

               
Cow position:
               
chr15:42142824-42143087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
148, 19
               

               
Conread position:
               
423-681
               

               
Cow position:
               
chr15:1804374-1804104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
5, 11
               

               
Conread position:
               
426-561
               

               
Cow position:
               
chr15:12332439-12332576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
427-680
               

               
Cow position:
               
chr15:53036998-53036742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
17, 85
               

               
Conread position:
               
427-681
               

               
Cow position:
               
chr15:5235030-5234776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
9, 94
               

               
Conread position:
               
427-681
               

               
Cow position:
               
chr15:16603792-16604050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
15, 114
               

               
Conread position:
               
427-681
               

               
Cow position:
               
chr15:22136655-22136910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 89
               

               
Conread position:
               
427-681
               

               
Cow position:
               
chr15:31857560-31857816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
148, 6
               

               
Conread position:
               
427-681
               

               
Cow position:
               
chr15:34139950-34140205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
107, 6
               

               
Conread position:
               
427-681
               

               
Cow position:
               
chr15:44640865-44641124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
91, 14
               

               
Conread position:
               
428-583
               

               
Cow position:
               
chr15:38845870-38846025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
428-671
               

               
Cow position:
               
chr15:9781440-9781684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
141, 92
               

               
Conread position:
               
428-680
               

               
Cow position:
               
chr15:2145169-2144904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
84, 112
               

               
Conread position:
               
429-616
               

               
Cow position:
               
chr15:14176530-14176337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
429-645
               

               
Cow position:
               
chr15:35441109-35440884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
13, 92
               

               
Conread position:
               
429-681
               

               
Cow position:
               
chr15:15573865-15573596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
100, 84
               

               
Conread position:
               
429-681
               

               
Cow position:
               
chr15:46563513-46563266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
430-681
               

               
Cow position:
               
chr15:41000099-40999841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
147, 89
               

               
Conread position:
               
431-571
               

               
Cow position:
               
chr15:6037482-6037343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
431-629
               

               
Cow position:
               
chr15:13284993-13285193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
9, 27
               

               
Conread position:
               
431-658
               

               
Cow position:
               
chr15:31560416-31560198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
142, 74
               

               
Conread position:
               
431-675
               

               
Cow position:
               
chr15:1297710-1297960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
11, 203
               

               
Conread position:
               
431-681
               

               
Cow position:
               
chr15:795051-794789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 218
               

               
Conread position:
               
431-681
               

               
Cow position:
               
chr15:8354013-8354271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
433-681
               

               
Cow position:
               
chr15:8230594-8230348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
11, 139
               

               
Conread position:
               
434-671
               

               
Cow position:
               
chr15:18017903-18018141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
21, 96
               

               
Conread position:
               
434-679
               

               
Cow position:
               
chr15:18671479-18671227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
138, 34
               

               
Conread position:
               
435-657
               

               
Cow position:
               
chr15:39326541-39326311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
57, 115
               

               
Conread position:
               
435-671
               

               
Cow position:
               
chr15:42195290-42195051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
138, 12
               

               
Conread position:
               
435-672
               

               
Cow position:
               
chr15:662493-662250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
9, 232
               

               
Conread position:
               
435-679
               

               
Cow position:
               
chr15:7192287-7192036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
7, 116
               

               
Conread position:
               
435-681
               

               
Cow position:
               
chr15:20351807-20352057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 222
               

               
Conread position:
               
437-568
               

               
Cow position:
               
chr15:18776773-18776642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
437-570
               

               
Cow position:
               
chr15:23719505-23719372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
437-576
               

               
Cow position:
               
chr15:31495245-31495107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
437-588
               

               
Cow position:
               
chr15:14261279-14261130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
437-616
               

               
Cow position:
               
chr15:9497522-9497337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
437-651
               

               
Cow position:
               
chr15:6905511-6905732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
437-656
               

               
Cow position:
               
chr15:24797828-24797609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
141, 16
               

               
Conread position:
               
437-657
               

               
Cow position:
               
chr15:41418851-41418628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
25, 61
               

               
Conread position:
               
437-658
               

               
Cow position:
               
chr15:16928116-16927893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
129, 192
               

               
Conread position:
               
437-660
               

               
Cow position:
               
chr15:35205174-35204941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
94, 10
               

               
Conread position:
               
437-662
               

               
Cow position:
               
chr15:31042846-31043075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 19
               

               
Conread position:
               
437-664
               

               
Cow position:
               
chr15:5929875-5930103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
437-673
               

               
Cow position:
               
chr15:2141325-2141080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
437-675
               

               
Cow position:
               
chr15:2953156-2952907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
134, 181
               

               
Conread position:
               
437-675
               

               
Cow position:
               
chr15:6227204-6226968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
36, 31
               

               
Conread position:
               
437-675
               

               
Cow position:
               
chr15:17233171-17233415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
437-679
               

               
Cow position:
               
chr15:39598220-39598468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
83, 100
               

               
Conread position:
               
437-680
               

               
Cow position:
               
chr15:9494315-9494070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
437-680
               

               
Cow position:
               
chr15:11559377-11559128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
437-680
               

               
Cow position:
               
chr15:45322764-45323013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
46, 19
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr15:45446-45189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
62, 175
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr15:16112378-16112629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
134, 166
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr15:17337340-17337586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr15:19186635-19186391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
153, 63
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr15:20081750-20081984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
30, 79
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr15:20370477-20370229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
100, 174
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr15:30001671-30001913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
19, 135
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr15:36259626-36259375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr15:44658341-44658585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
137, 24
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr15:49257842-49258090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
126, 171
               

               
Conread position:
               
437-682
               

               
Cow position:
               
chr15:26919297-26919049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 221
               

               
Conread position:
               
437-684
               

               
Cow position:
               
chr15:29330984-29331234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
105, 118
               

               
Conread position:
               
438-655
               

               
Cow position:
               
chr15:10660576-10660351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
131, 221
               

               
Conread position:
               
438-675
               

               
Cow position:
               
chr15:43599168-43599407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
129, 180
               

               
Conread position:
               
439-659
               

               
Cow position:
               
chr15:47843271-47843043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
132, 169
               

               
Conread position:
               
439-675
               

               
Cow position:
               
chr15:1857704-1857949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
439-680
               

               
Cow position:
               
chr15:21582944-21582692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
134, 177
               

               
Conread position:
               
440-680
               

               
Cow position:
               
chr15:10231769-10231515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
440-681
               

               
Cow position:
               
chr15:2668887-2669127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
130, 39
               

               
Conread position:
               
440-681
               

               
Cow position:
               
chr15:10737761-10737518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
441-584
               

               
Cow position:
               
chr15:30958234-30958091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
441-656
               

               
Cow position:
               
chr15:50177091-50177315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
441-681
               

               
Cow position:
               
chr15:9970996-9970748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
130, 88
               

               
Conread position:
               
441-681
               

               
Cow position:
               
chr15:15214999-15215248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 21
               

               
Conread position:
               
441-681
               

               
Cow position:
               
chr15:23768275-23768035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
213, 139
               

               
Conread position:
               
441-681
               

               
Cow position:
               
chr15:37205030-37205272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
131, 154
               

               
Conread position:
               
441-681
               

               
Cow position:
               
chr15:45216821-45217047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
441-684
               

               
Cow position:
               
chr15:37931777-37931531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
127, 82
               

               
Conread position:
               
443-681
               

               
Cow position:
               
chr15:17100725-17100482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
131, 65
               

               
Conread position:
               
443-681
               

               
Cow position:
               
chr15:17870300-17870058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
443-681
               

               
Cow position:
               
chr15:29810108-29810342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
130, 13
               

               
Conread position:
               
443-681
               

               
Cow position:
               
chr15:33624941-33625178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
116, 215
               

               
Conread position:
               
443-684
               

               
Cow position:
               
chr15:4178960-4178706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
128, 169
               

               
Conread position:
               
444-681
               

               
Cow position:
               
chr15:22532237-22532465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
444-681
               

               
Cow position:
               
chr15:26079366-26079136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
445-681
               

               
Cow position:
               
chr15:13387063-13387307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
129, 79
               

               
Conread position:
               
447-680
               

               
Cow position:
               
chr15:33643076-33643316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 186
               

               
Conread position:
               
447-681
               

               
Cow position:
               
chr15:5729928-5730168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
20, 84
               

               
Conread position:
               
450-675
               

               
Cow position:
               
chr15:49739045-49738823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
451-678
               

               
Cow position:
               
chr15:4534903-4535136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
88, 48
               

               
Conread position:
               
453-679
               

               
Cow position:
               
chr15:16639771-16640006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
74, 156
               

               
Conread position:
               
454-674
               

               
Cow position:
               
chr15:9928354-9928580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
454-681
               

               
Cow position:
               
chr15:35417630-35417394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
456-671
               

               
Cow position:
               
chr15:6657096-6657311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
116, 26
               

               
Conread position:
               
471-681
               

               
Cow position:
               
chr15:7962089-7962305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
98, 188
               

               
Conread position:
               
474-676
               

               
Cow position:
               
chr15:33284892-33285104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
478-681
               

               
Cow position:
               
chr15:17859207-17859010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
482-675
               

               
Cow position:
               
chr15:47280116-47279918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
482-681
               

               
Cow position:
               
chr15:15880949-15881159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
484-673
               

               
Cow position:
               
chr15:24941346-24941156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
87, 40
               

               
Conread position:
               
486-681
               

               
Cow position:
               
chr15:27280898-27281096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
488-681
               

               
Cow position:
               
chr15:5632710-5632906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 166
               

               
Conread position:
               
496-680
               

               
Cow position:
               
chr15:16904667-16904854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
78, 94
               

               
Conread position:
               
497-681
               

               
Cow position:
               
chr15:9871376-9871186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 17
               

               
Conread position:
               
501-681
               

               
Cow position:
               
chr15:11646450-11646260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
529-681
               

               
Cow position:
               
chr15:13684198-13684039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
530-681
               

               
Cow position:
               
chr15:36725107-36724952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
533-680
               

               
Cow position:
               
chr15:40009580-40009424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
536-675
               

               
Cow position:
               
chr15:34145077-34144933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
536-679
               

               
Cow position:
               
chr15:5691465-5691608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 61
               

               
Conread position:
               
536-681
               

               
Cow position:
               
chr15:23775862-23775724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 78
               

               
Conread position:
               
541-680
               

               
Cow position:
               
chr15:11363094-11362951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
577-681
               

               
Cow position:
               
chr15:7827914-7827809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               
Show alignments to all cow chromosomes.