• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8061H12.3
        

               
Conread position:
               
320-580
               

               
Cow position:
               
chr17:26802664-26802925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
62, 24
               

               
Conread position:
               
325-650
               

               
Cow position:
               
chr17:40639205-40638883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
58, 24
               

               
Conread position:
               
326-660
               

               
Cow position:
               
chr17:9770764-9770436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
23, 90
               

               
Conread position:
               
330-681
               

               
Cow position:
               
chr17:11831864-11832217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 36
               

               
Conread position:
               
331-656
               

               
Cow position:
               
chr17:31856924-31856598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
48, 18
               

               
Conread position:
               
331-681
               

               
Cow position:
               
chr17:908992-908648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
42, 35
               

               
Conread position:
               
334-673
               

               
Cow position:
               
chr17:7693322-7692974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 32
               

               
Conread position:
               
334-680
               

               
Cow position:
               
chr17:25118139-25117793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
15, 32
               

               
Conread position:
               
334-681
               

               
Cow position:
               
chr17:28468374-28468038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
46, 35
               

               
Conread position:
               
335-581
               

               
Cow position:
               
chr17:9940943-9940699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
107, 37
               

               
Conread position:
               
335-657
               

               
Cow position:
               
chr17:15684752-15684439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 34
               

               
Conread position:
               
335-664
               

               
Cow position:
               
chr17:21972878-21973214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
46, 34
               

               
Conread position:
               
335-673
               

               
Cow position:
               
chr17:27058300-27058645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 34
               

               
Conread position:
               
335-680
               

               
Cow position:
               
chr17:4105744-4106083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
225, 14
               

               
Conread position:
               
335-680
               

               
Cow position:
               
chr17:4121479-4121819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
227, 14
               

               
Conread position:
               
335-680
               

               
Cow position:
               
chr17:9854231-9853893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 94
               

               
Conread position:
               
335-681
               

               
Cow position:
               
chr17:40772079-40771737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
239, 34
               

               
Conread position:
               
335-684
               

               
Cow position:
               
chr17:32138168-32138516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
337-675
               

               
Cow position:
               
chr17:31480783-31481128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
45, 32
               

               
Conread position:
               
337-675
               

               
Cow position:
               
chr17:40741900-40741554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
45, 7
               

               
Conread position:
               
337-681
               

               
Cow position:
               
chr17:36178802-36179119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 34
               

               
Conread position:
               
338-653
               

               
Cow position:
               
chr17:26448789-26448472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
44, 31
               

               
Conread position:
               
338-657
               

               
Cow position:
               
chr17:14049963-14050275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
6, 29
               

               
Conread position:
               
338-681
               

               
Cow position:
               
chr17:31037131-31037478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
44, 27
               

               
Conread position:
               
339-628
               

               
Cow position:
               
chr17:27303735-27304002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
339-658
               

               
Cow position:
               
chr17:26231212-26230876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
339-681
               

               
Cow position:
               
chr17:6566729-6566369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
43, 25
               

               
Conread position:
               
339-681
               

               
Cow position:
               
chr17:20992793-20993138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 31
               

               
Conread position:
               
340-546
               

               
Cow position:
               
chr17:5344863-5344660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
39, 29
               

               
Conread position:
               
343-681
               

               
Cow position:
               
chr17:25901449-25901099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
39, 26
               

               
Conread position:
               
344-629
               

               
Cow position:
               
chr17:37815950-37816236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
54, 25
               

               
Conread position:
               
344-679
               

               
Cow position:
               
chr17:21114715-21115046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
344-681
               

               
Cow position:
               
chr17:43717100-43717412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
33, 25
               

               
Conread position:
               
346-561
               

               
Cow position:
               
chr17:20306571-20306355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
35, 23
               

               
Conread position:
               
346-570
               

               
Cow position:
               
chr17:31991168-31990952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
346-659
               

               
Cow position:
               
chr17:36275574-36275262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
33, 23
               

               
Conread position:
               
347-543
               

               
Cow position:
               
chr17:26225265-26225073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 22
               

               
Conread position:
               
347-675
               

               
Cow position:
               
chr17:24883333-24883658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
32, 22
               

               
Conread position:
               
347-681
               

               
Cow position:
               
chr17:25128117-25128446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
347-681
               

               
Cow position:
               
chr17:32278667-32279003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 22
               

               
Conread position:
               
347-681
               

               
Cow position:
               
chr17:32280905-32280569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 22
               

               
Conread position:
               
348-505
               

               
Cow position:
               
chr17:25352442-25352281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
30, 21
               

               
Conread position:
               
348-538
               

               
Cow position:
               
chr17:9077977-9078170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
348-543
               

               
Cow position:
               
chr17:19899136-19898936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
348-553
               

               
Cow position:
               
chr17:24895313-24895109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
31, 21
               

               
Conread position:
               
348-555
               

               
Cow position:
               
chr17:10508198-10508400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 55
               

               
Conread position:
               
348-567
               

               
Cow position:
               
chr17:20929480-20929263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
348-582
               

               
Cow position:
               
chr17:21466022-21466256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
348-621
               

               
Cow position:
               
chr17:32332856-32333130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
348-649
               

               
Cow position:
               
chr17:3153332-3153637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 21
               

               
Conread position:
               
348-651
               

               
Cow position:
               
chr17:36814601-36814292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
348-657
               

               
Cow position:
               
chr17:21806213-21806523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
25, 69
               

               
Conread position:
               
348-658
               

               
Cow position:
               
chr17:21292802-21293115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
24, 116
               

               
Conread position:
               
348-658
               

               
Cow position:
               
chr17:22056779-22057097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
348-658
               

               
Cow position:
               
chr17:27795891-27795571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 67
               

               
Conread position:
               
348-660
               

               
Cow position:
               
chr17:9056463-9056779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
348-672
               

               
Cow position:
               
chr17:4786245-4786584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
348-674
               

               
Cow position:
               
chr17:8836715-8837040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
94, 64
               

               
Conread position:
               
348-675
               

               
Cow position:
               
chr17:32027211-32027550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
26, 18
               

               
Conread position:
               
348-676
               

               
Cow position:
               
chr17:17193726-17193402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
32, 21
               

               
Conread position:
               
348-676
               

               
Cow position:
               
chr17:21489398-21489717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 21
               

               
Conread position:
               
348-679
               

               
Cow position:
               
chr17:13243818-13244136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 17
               

               
Conread position:
               
348-679
               

               
Cow position:
               
chr17:24077623-24077306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
223, 21
               

               
Conread position:
               
348-680
               

               
Cow position:
               
chr17:11664341-11664685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
348-680
               

               
Cow position:
               
chr17:32418881-32419211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr17:14652548-14652878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
230, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr17:15102653-15102982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
21, 81
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr17:16446190-16446530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr17:18146426-18146085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
31, 18
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr17:18201997-18201661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr17:20884761-20884425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
31, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr17:20932565-20932231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
43, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr17:21738629-21738977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr17:22032452-22032788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr17:24559529-24559195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
348-684
               

               
Cow position:
               
chr17:34948873-34948536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 67
               

               
Conread position:
               
349-610
               

               
Cow position:
               
chr17:18766757-18767020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
97, 16
               

               
Conread position:
               
349-679
               

               
Cow position:
               
chr17:11618822-11618488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
349-680
               

               
Cow position:
               
chr17:7810512-7810831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
349-681
               

               
Cow position:
               
chr17:17410535-17410191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
349-681
               

               
Cow position:
               
chr17:36791359-36791037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
30, 20
               

               
Conread position:
               
350-669
               

               
Cow position:
               
chr17:21757885-21758224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
350-670
               

               
Cow position:
               
chr17:24751146-24750832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
92, 19
               

               
Conread position:
               
350-675
               

               
Cow position:
               
chr17:25917120-25916804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
123, 19
               

               
Conread position:
               
350-681
               

               
Cow position:
               
chr17:11962300-11962647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
350-681
               

               
Cow position:
               
chr17:26000353-26000019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
23, 68
               

               
Conread position:
               
352-578
               

               
Cow position:
               
chr17:21788412-21788648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
25, 17
               

               
Conread position:
               
367-675
               

               
Cow position:
               
chr17:35338699-35339007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
26, 75
               

               
Conread position:
               
372-632
               

               
Cow position:
               
chr17:27440382-27440127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
200, 41
               

               
Conread position:
               
379-681
               

               
Cow position:
               
chr17:18108884-18109184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
180, 33
               

               
Conread position:
               
380-681
               

               
Cow position:
               
chr17:24752120-24752411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
62, 32
               

               
Conread position:
               
381-524
               

               
Cow position:
               
chr17:3471917-3471771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
381-551
               

               
Cow position:
               
chr17:25139475-25139301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
381-571
               

               
Cow position:
               
chr17:11224310-11224122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 123
               

               
Conread position:
               
381-582
               

               
Cow position:
               
chr17:5720078-5719877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
190, 52
               

               
Conread position:
               
381-623
               

               
Cow position:
               
chr17:24862655-24862424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
222, 44
               

               
Conread position:
               
381-624
               

               
Cow position:
               
chr17:950176-949934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
71, 30
               

               
Conread position:
               
381-631
               

               
Cow position:
               
chr17:5012041-5011801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
141, 42
               

               
Conread position:
               
381-635
               

               
Cow position:
               
chr17:2810834-2810574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
145, 13
               

               
Conread position:
               
381-636
               

               
Cow position:
               
chr17:21039756-21039511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
186, 41
               

               
Conread position:
               
381-657
               

               
Cow position:
               
chr17:25189490-25189214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
61, 21
               

               
Conread position:
               
381-661
               

               
Cow position:
               
chr17:1114098-1113811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
49, 91
               

               
Conread position:
               
381-664
               

               
Cow position:
               
chr17:22128123-22127846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
207, 21
               

               
Conread position:
               
381-672
               

               
Cow position:
               
chr17:10431764-10432065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
59, 31
               

               
Conread position:
               
381-674
               

               
Cow position:
               
chr17:9965822-9966119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
142, 42
               

               
Conread position:
               
381-675
               

               
Cow position:
               
chr17:17222544-17222252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
197, 31
               

               
Conread position:
               
381-675
               

               
Cow position:
               
chr17:21959483-21959779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 45
               

               
Conread position:
               
381-679
               

               
Cow position:
               
chr17:1035394-1035696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
87, 31
               

               
Conread position:
               
381-681
               

               
Cow position:
               
chr17:5514957-5514661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
193, 30
               

               
Conread position:
               
381-681
               

               
Cow position:
               
chr17:11280889-11281205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
46, 261
               

               
Conread position:
               
381-681
               

               
Cow position:
               
chr17:12109008-12108707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
95, 42
               

               
Conread position:
               
381-681
               

               
Cow position:
               
chr17:20874606-20874292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
27, 21
               

               
Conread position:
               
381-681
               

               
Cow position:
               
chr17:37699140-37699454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
381-682
               

               
Cow position:
               
chr17:13940118-13940419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 31
               

               
Conread position:
               
381-684
               

               
Cow position:
               
chr17:30665472-30665169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
190, 21
               

               
Conread position:
               
381-684
               

               
Cow position:
               
chr17:34078908-34079204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
214, 21
               

               
Conread position:
               
382-588
               

               
Cow position:
               
chr17:37129412-37129200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
382-635
               

               
Cow position:
               
chr17:7590258-7590509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
57, 17
               

               
Conread position:
               
383-681
               

               
Cow position:
               
chr17:1492948-1493253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
195, 40
               

               
Conread position:
               
383-681
               

               
Cow position:
               
chr17:14025709-14026014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
125, 29
               

               
Conread position:
               
383-681
               

               
Cow position:
               
chr17:18495321-18495618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
170, 42
               

               
Conread position:
               
386-579
               

               
Cow position:
               
chr17:33913371-33913566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 47
               

               
Conread position:
               
386-675
               

               
Cow position:
               
chr17:5898329-5898616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
131, 25
               

               
Conread position:
               
386-681
               

               
Cow position:
               
chr17:21325539-21325235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
28, 210
               

               
Conread position:
               
387-681
               

               
Cow position:
               
chr17:20032714-20033010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
83, 36
               

               
Conread position:
               
387-684
               

               
Cow position:
               
chr17:21744130-21743838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
193, 17
               

               
Conread position:
               
391-681
               

               
Cow position:
               
chr17:5900572-5900269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 229
               

               
Conread position:
               
397-681
               

               
Cow position:
               
chr17:8079508-8079219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 196
               

               
Conread position:
               
405-661
               

               
Cow position:
               
chr17:1469563-1469299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 99
               

               
Conread position:
               
406-581
               

               
Cow position:
               
chr17:28814306-28814484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
17, 171
               

               
Conread position:
               
406-664
               

               
Cow position:
               
chr17:23883087-23883337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
24, 11
               

               
Conread position:
               
407-567
               

               
Cow position:
               
chr17:37430322-37430483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
407-571
               

               
Cow position:
               
chr17:23702809-23702642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
23, 163
               

               
Conread position:
               
407-662
               

               
Cow position:
               
chr17:39715338-39715079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
18, 71
               

               
Conread position:
               
407-664
               

               
Cow position:
               
chr17:38833228-38832962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
407-675
               

               
Cow position:
               
chr17:20780698-20780419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
407-681
               

               
Cow position:
               
chr17:9117827-9117549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
407-681
               

               
Cow position:
               
chr17:11215048-11215327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
29, 107
               

               
Conread position:
               
407-681
               

               
Cow position:
               
chr17:15340569-15340850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
35, 219
               

               
Conread position:
               
410-681
               

               
Cow position:
               
chr17:1634312-1634587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
32, 197
               

               
Conread position:
               
414-578
               

               
Cow position:
               
chr17:12342306-12342470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
415-631
               

               
Cow position:
               
chr17:9487467-9487254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 14
               

               
Conread position:
               
415-672
               

               
Cow position:
               
chr17:13638796-13638545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
185, 11
               

               
Conread position:
               
415-673
               

               
Cow position:
               
chr17:27202869-27203134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
415-681
               

               
Cow position:
               
chr17:32273512-32273784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
415-681
               

               
Cow position:
               
chr17:34751232-34751503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 107
               

               
Conread position:
               
416-668
               

               
Cow position:
               
chr17:11839896-11839630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
416-680
               

               
Cow position:
               
chr17:21335519-21335791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
416-681
               

               
Cow position:
               
chr17:24822033-24821768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
140, 17
               

               
Conread position:
               
416-681
               

               
Cow position:
               
chr17:32349240-32348976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
155, 95
               

               
Conread position:
               
416-684
               

               
Cow position:
               
chr17:9746685-9746414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
26, 13
               

               
Conread position:
               
417-650
               

               
Cow position:
               
chr17:9824841-9824602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr17:7760304-7760560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
165, 17
               

               
Conread position:
               
417-680
               

               
Cow position:
               
chr17:9911928-9911668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
182, 16
               

               
Conread position:
               
417-680
               

               
Cow position:
               
chr17:22564357-22564084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
25, 54
               

               
Conread position:
               
418-676
               

               
Cow position:
               
chr17:6848964-6848713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
418-681
               

               
Cow position:
               
chr17:33657896-33658168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
12, 54
               

               
Conread position:
               
418-681
               

               
Cow position:
               
chr17:40673542-40673288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 167
               

               
Conread position:
               
419-675
               

               
Cow position:
               
chr17:6329286-6329020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
419-681
               

               
Cow position:
               
chr17:5422896-5423167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
19, 192
               

               
Conread position:
               
420-571
               

               
Cow position:
               
chr17:34835940-34836090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
22, 11
               

               
Conread position:
               
420-581
               

               
Cow position:
               
chr17:12091652-12091812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
22, 42
               

               
Conread position:
               
420-673
               

               
Cow position:
               
chr17:7143038-7142774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
18, 191
               

               
Conread position:
               
420-673
               

               
Cow position:
               
chr17:33275578-33275837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
9, 112
               

               
Conread position:
               
420-681
               

               
Cow position:
               
chr17:924043-923777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
150, 22
               

               
Conread position:
               
420-681
               

               
Cow position:
               
chr17:6423935-6423663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
39, 24
               

               
Conread position:
               
420-681
               

               
Cow position:
               
chr17:8690283-8690540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
154, 75
               

               
Conread position:
               
420-681
               

               
Cow position:
               
chr17:10561801-10561532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
106, 17
               

               
Conread position:
               
421-681
               

               
Cow position:
               
chr17:5143992-5144264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
21, 56
               

               
Conread position:
               
422-664
               

               
Cow position:
               
chr17:38263321-38263567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
14, 207
               

               
Conread position:
               
422-681
               

               
Cow position:
               
chr17:23563633-23563887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
84, 19
               

               
Conread position:
               
424-681
               

               
Cow position:
               
chr17:25502272-25502012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
150, 7
               

               
Conread position:
               
427-576
               

               
Cow position:
               
chr17:29245606-29245456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
427-612
               

               
Cow position:
               
chr17:40312867-40312678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
144, 65
               

               
Conread position:
               
427-668
               

               
Cow position:
               
chr17:29356077-29356314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
15, 174
               

               
Conread position:
               
427-681
               

               
Cow position:
               
chr17:39857548-39857295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
428-639
               

               
Cow position:
               
chr17:16158653-16158435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
429-548
               

               
Cow position:
               
chr17:10825641-10825520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
429-630
               

               
Cow position:
               
chr17:26730452-26730656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
152, 12
               

               
Conread position:
               
429-679
               

               
Cow position:
               
chr17:36864791-36864535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
429-681
               

               
Cow position:
               
chr17:39736333-39736083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
137, 6
               

               
Conread position:
               
430-580
               

               
Cow position:
               
chr17:10769353-10769502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
430-641
               

               
Cow position:
               
chr17:4891205-4891418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
139, 7
               

               
Conread position:
               
431-651
               

               
Cow position:
               
chr17:14848390-14848605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
146, 16
               

               
Conread position:
               
431-658
               

               
Cow position:
               
chr17:21755273-21755504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
11, 87
               

               
Conread position:
               
431-674
               

               
Cow position:
               
chr17:21922476-21922713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
141, 186
               

               
Conread position:
               
431-681
               

               
Cow position:
               
chr17:11912345-11912595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
151, 183
               

               
Conread position:
               
431-681
               

               
Cow position:
               
chr17:12536306-12536566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
431-681
               

               
Cow position:
               
chr17:14003984-14003720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
431-681
               

               
Cow position:
               
chr17:25097613-25097365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
431-681
               

               
Cow position:
               
chr17:29292224-29292464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
231, 58
               

               
Conread position:
               
431-681
               

               
Cow position:
               
chr17:33933585-33933846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
431-681
               

               
Cow position:
               
chr17:41891905-41892162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
127, 6
               

               
Conread position:
               
431-682
               

               
Cow position:
               
chr17:11344368-11344118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
143, 6
               

               
Conread position:
               
431-684
               

               
Cow position:
               
chr17:38362839-38363087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
139, 70
               

               
Conread position:
               
432-681
               

               
Cow position:
               
chr17:19891781-19891522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 30
               

               
Conread position:
               
432-681
               

               
Cow position:
               
chr17:20126753-20126516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
433-675
               

               
Cow position:
               
chr17:25594535-25594796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
433-679
               

               
Cow position:
               
chr17:12591331-12591071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
433-681
               

               
Cow position:
               
chr17:22775534-22775273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 173
               

               
Conread position:
               
433-684
               

               
Cow position:
               
chr17:5224556-5224300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
13, 8
               

               
Conread position:
               
435-679
               

               
Cow position:
               
chr17:13922643-13922383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
437-569
               

               
Cow position:
               
chr17:4833377-4833508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
437-583
               

               
Cow position:
               
chr17:34836323-34836177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
142, 136
               

               
Conread position:
               
437-596
               

               
Cow position:
               
chr17:3067707-3067869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
437-632
               

               
Cow position:
               
chr17:25126503-25126303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
437-650
               

               
Cow position:
               
chr17:25032330-25032550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
437-657
               

               
Cow position:
               
chr17:20335801-20335589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
128, 37
               

               
Conread position:
               
437-658
               

               
Cow position:
               
chr17:2275622-2275400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
437-658
               

               
Cow position:
               
chr17:2662576-2662349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
68, 74
               

               
Conread position:
               
437-658
               

               
Cow position:
               
chr17:21495523-21495302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
137, 62
               

               
Conread position:
               
437-658
               

               
Cow position:
               
chr17:29026224-29025993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
62, 137
               

               
Conread position:
               
437-671
               

               
Cow position:
               
chr17:20848674-20848434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
134, 87
               

               
Conread position:
               
437-671
               

               
Cow position:
               
chr17:25342589-25342828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
437-672
               

               
Cow position:
               
chr17:38990258-38990015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
67, 20
               

               
Conread position:
               
437-673
               

               
Cow position:
               
chr17:23516791-23517032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
137, 10
               

               
Conread position:
               
437-675
               

               
Cow position:
               
chr17:30718266-30718511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
437-676
               

               
Cow position:
               
chr17:23101066-23101299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
11, 127
               

               
Conread position:
               
437-679
               

               
Cow position:
               
chr17:24580143-24580392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 52
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr17:979015-979254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
137, 86
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr17:1562635-1562869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr17:3354034-3353783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
82, 52
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr17:7137139-7136884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr17:7803023-7803272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
136, 195
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr17:10458780-10459035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr17:12219787-12220034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
144, 115
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr17:16371409-16371157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr17:17682758-17683001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
12, 70
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr17:22806391-22806634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
136, 107
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr17:25616401-25616161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr17:25796185-25796434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
134, 156
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr17:27048307-27048061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
135, 65
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr17:30529393-30529639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
31, 36
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr17:32989628-32989384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
134, 113
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr17:32993472-32993716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
134, 113
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr17:37479850-37480092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
215, 93
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr17:40288848-40289096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
134, 161
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr17:41030089-41029855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
137, 14
               

               
Conread position:
               
438-583
               

               
Cow position:
               
chr17:1350602-1350455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
438-675
               

               
Cow position:
               
chr17:8544455-8544214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
92, 21
               

               
Conread position:
               
438-675
               

               
Cow position:
               
chr17:14033491-14033732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
117, 107
               

               
Conread position:
               
438-681
               

               
Cow position:
               
chr17:9565451-9565211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
133, 18
               

               
Conread position:
               
438-681
               

               
Cow position:
               
chr17:11215744-11215989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
136, 18
               

               
Conread position:
               
438-681
               

               
Cow position:
               
chr17:30539119-30539349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
438-681
               

               
Cow position:
               
chr17:34596089-34595846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
438-681
               

               
Cow position:
               
chr17:37481921-37482171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
135, 32
               

               
Conread position:
               
438-682
               

               
Cow position:
               
chr17:552816-553059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
31, 122
               

               
Conread position:
               
440-680
               

               
Cow position:
               
chr17:27819444-27819209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 22
               

               
Conread position:
               
440-681
               

               
Cow position:
               
chr17:1040893-1040648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
124, 19
               

               
Conread position:
               
441-627
               

               
Cow position:
               
chr17:20810342-20810533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
129, 20
               

               
Conread position:
               
441-636
               

               
Cow position:
               
chr17:4213890-4213693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
72, 6
               

               
Conread position:
               
443-679
               

               
Cow position:
               
chr17:24974091-24973856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 134
               

               
Conread position:
               
443-680
               

               
Cow position:
               
chr17:11156348-11156586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
127, 66
               

               
Conread position:
               
443-681
               

               
Cow position:
               
chr17:1410093-1410337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
128, 8
               

               
Conread position:
               
444-681
               

               
Cow position:
               
chr17:5006343-5006585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
22, 82
               

               
Conread position:
               
444-681
               

               
Cow position:
               
chr17:33052996-33052761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
68, 132
               

               
Conread position:
               
448-684
               

               
Cow position:
               
chr17:11171932-11171695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
125, 13
               

               
Conread position:
               
449-674
               

               
Cow position:
               
chr17:26233690-26233917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
82, 71
               

               
Conread position:
               
449-681
               

               
Cow position:
               
chr17:7654309-7654553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
18, 224
               

               
Conread position:
               
449-681
               

               
Cow position:
               
chr17:15634747-15634975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
187, 15
               

               
Conread position:
               
451-673
               

               
Cow position:
               
chr17:23798418-23798189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
122, 10
               

               
Conread position:
               
451-681
               

               
Cow position:
               
chr17:21628614-21628379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
123, 6
               

               
Conread position:
               
456-604
               

               
Cow position:
               
chr17:7851220-7851066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
457-681
               

               
Cow position:
               
chr17:31230991-31231209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
113, 58
               

               
Conread position:
               
458-672
               

               
Cow position:
               
chr17:20081668-20081876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
177, 31
               

               
Conread position:
               
460-639
               

               
Cow position:
               
chr17:22246118-22245936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
461-681
               

               
Cow position:
               
chr17:3782171-3781947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
112, 59
               

               
Conread position:
               
463-679
               

               
Cow position:
               
chr17:8279582-8279805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
106, 21
               

               
Conread position:
               
465-681
               

               
Cow position:
               
chr17:34316593-34316803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
468-677
               

               
Cow position:
               
chr17:14762001-14762213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
103, 145
               

               
Conread position:
               
468-684
               

               
Cow position:
               
chr17:11101686-11101901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
108, 34
               

               
Conread position:
               
470-681
               

               
Cow position:
               
chr17:38647180-38646962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
104, 157
               

               
Conread position:
               
475-675
               

               
Cow position:
               
chr17:21599569-21599773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
106, 88
               

               
Conread position:
               
475-681
               

               
Cow position:
               
chr17:28540142-28539931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
31, 41
               

               
Conread position:
               
480-681
               

               
Cow position:
               
chr17:18860612-18860822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
482-681
               

               
Cow position:
               
chr17:24928582-24928376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
495-684
               

               
Cow position:
               
chr17:5688267-5688458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
76, 159
               

               
Conread position:
               
496-673
               

               
Cow position:
               
chr17:2034622-2034446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
76, 127
               

               
Conread position:
               
505-680
               

               
Cow position:
               
chr17:6624337-6624161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 9
               

               
Conread position:
               
506-681
               

               
Cow position:
               
chr17:12059010-12059192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
507-681
               

               
Cow position:
               
chr17:15333628-15333810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
510-678
               

               
Cow position:
               
chr17:20839487-20839656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
515-681
               

               
Cow position:
               
chr17:267511-267686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
59, 90
               

               
Conread position:
               
515-681
               

               
Cow position:
               
chr17:41289948-41290118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
59, 109
               

               
Conread position:
               
517-681
               

               
Cow position:
               
chr17:9778315-9778148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 56
               

               
Conread position:
               
524-681
               

               
Cow position:
               
chr17:3471484-3471322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
524-681
               

               
Cow position:
               
chr17:24761163-24761325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
530-681
               

               
Cow position:
               
chr17:2839968-2839810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
530-681
               

               
Cow position:
               
chr17:13143629-13143788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
536-681
               

               
Cow position:
               
chr17:1295518-1295669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
536-682
               

               
Cow position:
               
chr17:20306103-20305949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
537-679
               

               
Cow position:
               
chr17:966694-966835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
123, 41
               

               
Conread position:
               
539-681
               

               
Cow position:
               
chr17:21312759-21312908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
541-681
               

               
Cow position:
               
chr17:15133189-15133059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
574-681
               

               
Cow position:
               
chr17:42347217-42347322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               
Show alignments to all cow chromosomes.