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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8061H12.3
        

               
Conread position:
               
318-501
               

               
Cow position:
               
chr2:11617562-11617365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
321-681
               

               
Cow position:
               
chr2:76313645-76314002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
324-555
               

               
Cow position:
               
chr2:46053691-46053464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
45, 8
               

               
Conread position:
               
325-658
               

               
Cow position:
               
chr2:76861236-76861576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
325-681
               

               
Cow position:
               
chr2:46119552-46119899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 17
               

               
Conread position:
               
327-684
               

               
Cow position:
               
chr2:24594080-24593730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
10, 44
               

               
Conread position:
               
328-664
               

               
Cow position:
               
chr2:29735041-29734702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
55, 21
               

               
Conread position:
               
329-571
               

               
Cow position:
               
chr2:24722061-24722293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
330-681
               

               
Cow position:
               
chr2:66479986-66480326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
243, 39
               

               
Conread position:
               
331-681
               

               
Cow position:
               
chr2:64323450-64323103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 91
               

               
Conread position:
               
332-675
               

               
Cow position:
               
chr2:52484753-52485109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
169, 37
               

               
Conread position:
               
333-684
               

               
Cow position:
               
chr2:44168274-44167935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
335-527
               

               
Cow position:
               
chr2:75637522-75637714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
44, 34
               

               
Conread position:
               
335-571
               

               
Cow position:
               
chr2:15219318-15219091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
335-571
               

               
Cow position:
               
chr2:52596529-52596747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
335-583
               

               
Cow position:
               
chr2:16889848-16890087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 70
               

               
Conread position:
               
335-648
               

               
Cow position:
               
chr2:76762429-76762111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
46, 34
               

               
Conread position:
               
335-657
               

               
Cow position:
               
chr2:70896257-70895919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 34
               

               
Conread position:
               
335-660
               

               
Cow position:
               
chr2:8821452-8821119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 268
               

               
Conread position:
               
335-661
               

               
Cow position:
               
chr2:19137682-19138011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
37, 91
               

               
Conread position:
               
335-675
               

               
Cow position:
               
chr2:28820580-28820231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
42, 105
               

               
Conread position:
               
335-679
               

               
Cow position:
               
chr2:58687143-58686801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
50, 34
               

               
Conread position:
               
335-681
               

               
Cow position:
               
chr2:1304159-1303811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
44, 31
               

               
Conread position:
               
335-681
               

               
Cow position:
               
chr2:45498995-45499340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
47, 14
               

               
Conread position:
               
335-681
               

               
Cow position:
               
chr2:57776561-57776211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
66, 34
               

               
Conread position:
               
335-681
               

               
Cow position:
               
chr2:71437168-71437518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
47, 35
               

               
Conread position:
               
335-682
               

               
Cow position:
               
chr2:16515001-16514645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
47, 34
               

               
Conread position:
               
336-570
               

               
Cow position:
               
chr2:15229744-15229504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 8
               

               
Conread position:
               
336-679
               

               
Cow position:
               
chr2:80275085-80275428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 79
               

               
Conread position:
               
336-680
               

               
Cow position:
               
chr2:16505261-16505612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 34
               

               
Conread position:
               
336-681
               

               
Cow position:
               
chr2:76562330-76561974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
46, 33
               

               
Conread position:
               
337-655
               

               
Cow position:
               
chr2:45642287-45642602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
150, 7
               

               
Conread position:
               
337-662
               

               
Cow position:
               
chr2:30351497-30351820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 32
               

               
Conread position:
               
338-681
               

               
Cow position:
               
chr2:42801241-42800907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
31, 78
               

               
Conread position:
               
338-681
               

               
Cow position:
               
chr2:55632977-55632641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 31
               

               
Conread position:
               
339-680
               

               
Cow position:
               
chr2:73359907-73360244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
339-681
               

               
Cow position:
               
chr2:14349983-14349648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 27
               

               
Conread position:
               
339-681
               

               
Cow position:
               
chr2:15298739-15298398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
40, 30
               

               
Conread position:
               
339-681
               

               
Cow position:
               
chr2:15597278-15597611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
130, 30
               

               
Conread position:
               
340-681
               

               
Cow position:
               
chr2:54790486-54790144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
42, 29
               

               
Conread position:
               
341-661
               

               
Cow position:
               
chr2:33988104-33988431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
41, 28
               

               
Conread position:
               
344-681
               

               
Cow position:
               
chr2:27173553-27173233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
230, 25
               

               
Conread position:
               
344-681
               

               
Cow position:
               
chr2:73354006-73353653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
33, 19
               

               
Conread position:
               
345-674
               

               
Cow position:
               
chr2:74249024-74249355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
24, 70
               

               
Conread position:
               
346-571
               

               
Cow position:
               
chr2:39350291-39350515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
20, 59
               

               
Conread position:
               
346-656
               

               
Cow position:
               
chr2:41040509-41040825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 23
               

               
Conread position:
               
346-674
               

               
Cow position:
               
chr2:16839835-16839502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
33, 18
               

               
Conread position:
               
346-681
               

               
Cow position:
               
chr2:69419392-69419724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
26, 69
               

               
Conread position:
               
347-516
               

               
Cow position:
               
chr2:30384068-30384236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
22, 68
               

               
Conread position:
               
347-562
               

               
Cow position:
               
chr2:46317069-46316859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
22, 8
               

               
Conread position:
               
347-570
               

               
Cow position:
               
chr2:9543508-9543293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
32, 22
               

               
Conread position:
               
347-571
               

               
Cow position:
               
chr2:22370751-22370965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
347-571
               

               
Cow position:
               
chr2:60260789-60261014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
95, 22
               

               
Conread position:
               
347-624
               

               
Cow position:
               
chr2:68328655-68328933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
26, 82
               

               
Conread position:
               
347-650
               

               
Cow position:
               
chr2:60091239-60091535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
26, 59
               

               
Conread position:
               
347-675
               

               
Cow position:
               
chr2:71621852-71622181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
347-679
               

               
Cow position:
               
chr2:19494411-19494074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 68
               

               
Conread position:
               
347-679
               

               
Cow position:
               
chr2:40728556-40728216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
347-681
               

               
Cow position:
               
chr2:11599618-11599300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
35, 17
               

               
Conread position:
               
347-681
               

               
Cow position:
               
chr2:13001993-13001668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
347-681
               

               
Cow position:
               
chr2:45624228-45623878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
347-681
               

               
Cow position:
               
chr2:46331263-46330922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
39, 22
               

               
Conread position:
               
347-684
               

               
Cow position:
               
chr2:70674937-70674585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
348-550
               

               
Cow position:
               
chr2:39642943-39642749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
348-569
               

               
Cow position:
               
chr2:30954397-30954616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 21
               

               
Conread position:
               
348-571
               

               
Cow position:
               
chr2:57802286-57802511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
348-581
               

               
Cow position:
               
chr2:34474086-34474328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 22
               

               
Conread position:
               
348-583
               

               
Cow position:
               
chr2:50913819-50914046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
21, 62
               

               
Conread position:
               
348-590
               

               
Cow position:
               
chr2:46019420-46019660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
21, 120
               

               
Conread position:
               
348-643
               

               
Cow position:
               
chr2:15348592-15348291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
31, 21
               

               
Conread position:
               
348-656
               

               
Cow position:
               
chr2:49467825-49467515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
31, 22
               

               
Conread position:
               
348-658
               

               
Cow position:
               
chr2:24271410-24271118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
21, 67
               

               
Conread position:
               
348-658
               

               
Cow position:
               
chr2:72309801-72310114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
348-659
               

               
Cow position:
               
chr2:55496098-55496402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
348-672
               

               
Cow position:
               
chr2:12237034-12237364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
24, 184
               

               
Conread position:
               
348-673
               

               
Cow position:
               
chr2:29290122-29290440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
31, 75
               

               
Conread position:
               
348-673
               

               
Cow position:
               
chr2:46312631-46312322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
348-675
               

               
Cow position:
               
chr2:13369853-13369524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
348-675
               

               
Cow position:
               
chr2:28726658-28726342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
31, 22
               

               
Conread position:
               
348-675
               

               
Cow position:
               
chr2:46033530-46033200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
21, 65
               

               
Conread position:
               
348-675
               

               
Cow position:
               
chr2:56350716-56351049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
348-675
               

               
Cow position:
               
chr2:69199129-69199447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 16
               

               
Conread position:
               
348-679
               

               
Cow position:
               
chr2:78249935-78249601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
34, 24
               

               
Conread position:
               
348-680
               

               
Cow position:
               
chr2:21380208-21380537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 69
               

               
Conread position:
               
348-680
               

               
Cow position:
               
chr2:32431542-32431864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
34, 22
               

               
Conread position:
               
348-680
               

               
Cow position:
               
chr2:43995126-43994801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
348-680
               

               
Cow position:
               
chr2:44051504-44051173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr2:14218850-14218510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
21, 57
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr2:14826475-14826151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr2:19155990-19156323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 16
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr2:21382653-21382991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr2:27178843-27178518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr2:29122080-29121747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr2:31749771-31750107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr2:32264198-32264531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
224, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr2:32660377-32660036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr2:39068475-39068168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr2:41915232-41915557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
32, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr2:45784945-45784593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr2:46129970-46130287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr2:46351587-46351903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
88, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr2:47008144-47008481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
56, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr2:47152349-47152673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr2:51594967-51594626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
31, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr2:54700653-54700315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr2:67745445-67745115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr2:71624202-71624518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
348-682
               

               
Cow position:
               
chr2:59396855-59397195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
21, 67
               

               
Conread position:
               
348-684
               

               
Cow position:
               
chr2:79765-80101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
32, 21
               

               
Conread position:
               
348-684
               

               
Cow position:
               
chr2:23713070-23712743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
25, 67
               

               
Conread position:
               
349-673
               

               
Cow position:
               
chr2:58135194-58135526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 20
               

               
Conread position:
               
349-680
               

               
Cow position:
               
chr2:11657084-11656759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
349-681
               

               
Cow position:
               
chr2:69250472-69250815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
350-571
               

               
Cow position:
               
chr2:43990964-43990750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 65
               

               
Conread position:
               
350-658
               

               
Cow position:
               
chr2:44022609-44022921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
350-670
               

               
Cow position:
               
chr2:56937870-56937554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
232, 19
               

               
Conread position:
               
350-675
               

               
Cow position:
               
chr2:32048673-32048349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
10, 20
               

               
Conread position:
               
350-680
               

               
Cow position:
               
chr2:46202461-46202134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
350-681
               

               
Cow position:
               
chr2:31460151-31460468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
228, 19
               

               
Conread position:
               
353-675
               

               
Cow position:
               
chr2:72528153-72527824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
28, 13
               

               
Conread position:
               
353-681
               

               
Cow position:
               
chr2:47065303-47064977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
354-679
               

               
Cow position:
               
chr2:28257666-28257325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 15
               

               
Conread position:
               
355-680
               

               
Cow position:
               
chr2:13354867-13354538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
24, 12
               

               
Conread position:
               
356-571
               

               
Cow position:
               
chr2:35988430-35988641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
13, 68
               

               
Conread position:
               
376-681
               

               
Cow position:
               
chr2:20900295-20900602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
205, 34
               

               
Conread position:
               
377-681
               

               
Cow position:
               
chr2:44081609-44081298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
16, 113
               

               
Conread position:
               
378-571
               

               
Cow position:
               
chr2:39095520-39095334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
378-682
               

               
Cow position:
               
chr2:53430881-53430587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
287, 24
               

               
Conread position:
               
380-658
               

               
Cow position:
               
chr2:29160069-29159796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
192, 34
               

               
Conread position:
               
380-679
               

               
Cow position:
               
chr2:6539059-6539371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
40, 234
               

               
Conread position:
               
380-681
               

               
Cow position:
               
chr2:43835399-43835698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
118, 32
               

               
Conread position:
               
380-681
               

               
Cow position:
               
chr2:77157186-77157486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
196, 32
               

               
Conread position:
               
381-549
               

               
Cow position:
               
chr2:11217958-11217792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
54, 21
               

               
Conread position:
               
381-568
               

               
Cow position:
               
chr2:46014929-46014747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
381-571
               

               
Cow position:
               
chr2:29394846-29395032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
176, 42
               

               
Conread position:
               
381-634
               

               
Cow position:
               
chr2:8843664-8843918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
87, 50
               

               
Conread position:
               
381-654
               

               
Cow position:
               
chr2:69579516-69579788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
179, 31
               

               
Conread position:
               
381-658
               

               
Cow position:
               
chr2:30642488-30642777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
34, 252
               

               
Conread position:
               
381-668
               

               
Cow position:
               
chr2:67386311-67386605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
169, 21
               

               
Conread position:
               
381-673
               

               
Cow position:
               
chr2:85926225-85925928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
25, 19
               

               
Conread position:
               
381-674
               

               
Cow position:
               
chr2:15058902-15059191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
189, 30
               

               
Conread position:
               
381-675
               

               
Cow position:
               
chr2:80116257-80115969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
193, 21
               

               
Conread position:
               
381-676
               

               
Cow position:
               
chr2:82957841-82957544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
192, 34
               

               
Conread position:
               
381-681
               

               
Cow position:
               
chr2:19294752-19294456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
191, 50
               

               
Conread position:
               
381-681
               

               
Cow position:
               
chr2:20791263-20791561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
37, 167
               

               
Conread position:
               
381-681
               

               
Cow position:
               
chr2:26805950-26806252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
191, 56
               

               
Conread position:
               
381-681
               

               
Cow position:
               
chr2:43790260-43789965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
190, 31
               

               
Conread position:
               
381-681
               

               
Cow position:
               
chr2:46188937-46189236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
195, 31
               

               
Conread position:
               
381-681
               

               
Cow position:
               
chr2:50766636-50766354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
189, 31
               

               
Conread position:
               
381-681
               

               
Cow position:
               
chr2:67595857-67596153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
194, 31
               

               
Conread position:
               
381-682
               

               
Cow position:
               
chr2:12682499-12682800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
87, 42
               

               
Conread position:
               
381-684
               

               
Cow position:
               
chr2:1709127-1708841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
189, 48
               

               
Conread position:
               
382-571
               

               
Cow position:
               
chr2:54253548-54253358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
15, 7
               

               
Conread position:
               
383-616
               

               
Cow position:
               
chr2:46383301-46383538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
189, 50
               

               
Conread position:
               
385-660
               

               
Cow position:
               
chr2:68870848-68870568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
197, 41
               

               
Conread position:
               
385-681
               

               
Cow position:
               
chr2:82054680-82054981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
21, 8
               

               
Conread position:
               
386-570
               

               
Cow position:
               
chr2:14626759-14626571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
26, 147
               

               
Conread position:
               
386-657
               

               
Cow position:
               
chr2:46204674-46204404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
173, 26
               

               
Conread position:
               
387-653
               

               
Cow position:
               
chr2:29860155-29859900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
184, 15
               

               
Conread position:
               
388-675
               

               
Cow position:
               
chr2:1762944-1762664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
179, 24
               

               
Conread position:
               
388-681
               

               
Cow position:
               
chr2:31500157-31499865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
117, 21
               

               
Conread position:
               
388-681
               

               
Cow position:
               
chr2:56828408-56828707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
107, 34
               

               
Conread position:
               
394-585
               

               
Cow position:
               
chr2:39663526-39663342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
14, 8
               

               
Conread position:
               
396-669
               

               
Cow position:
               
chr2:62861739-62861463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
31, 18
               

               
Conread position:
               
398-571
               

               
Cow position:
               
chr2:64773536-64773363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
400-681
               

               
Cow position:
               
chr2:2589809-2590089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
171, 22
               

               
Conread position:
               
406-615
               

               
Cow position:
               
chr2:43029686-43029467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
32, 42
               

               
Conread position:
               
407-583
               

               
Cow position:
               
chr2:44216577-44216400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
407-607
               

               
Cow position:
               
chr2:46124560-46124767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
23, 107
               

               
Conread position:
               
407-639
               

               
Cow position:
               
chr2:48130762-48130525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
131, 59
               

               
Conread position:
               
407-651
               

               
Cow position:
               
chr2:64131563-64131313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
36, 28
               

               
Conread position:
               
407-675
               

               
Cow position:
               
chr2:46406477-46406186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
407-681
               

               
Cow position:
               
chr2:24434137-24434414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
25, 151
               

               
Conread position:
               
407-681
               

               
Cow position:
               
chr2:39263628-39263348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
37, 18
               

               
Conread position:
               
407-681
               

               
Cow position:
               
chr2:42927310-42927585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
180, 26
               

               
Conread position:
               
407-681
               

               
Cow position:
               
chr2:44191624-44191344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
31, 52
               

               
Conread position:
               
407-681
               

               
Cow position:
               
chr2:53851577-53851298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
167, 26
               

               
Conread position:
               
407-681
               

               
Cow position:
               
chr2:62644735-62644450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
407-681
               

               
Cow position:
               
chr2:81927988-81927716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 26
               

               
Conread position:
               
407-681
               

               
Cow position:
               
chr2:85496192-85496458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 106
               

               
Conread position:
               
408-658
               

               
Cow position:
               
chr2:70781233-70780982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
28, 123
               

               
Conread position:
               
410-681
               

               
Cow position:
               
chr2:46343009-46343276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
32, 38
               

               
Conread position:
               
412-680
               

               
Cow position:
               
chr2:43952104-43951854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
414-658
               

               
Cow position:
               
chr2:79837590-79837825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
28, 160
               

               
Conread position:
               
414-679
               

               
Cow position:
               
chr2:34918272-34917986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
11, 93
               

               
Conread position:
               
414-679
               

               
Cow position:
               
chr2:41955017-41954747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
157, 12
               

               
Conread position:
               
414-679
               

               
Cow position:
               
chr2:61421032-61421309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
415-556
               

               
Cow position:
               
chr2:37224204-37224061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
415-593
               

               
Cow position:
               
chr2:46733798-46733978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
415-607
               

               
Cow position:
               
chr2:870220-870410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
41, 99
               

               
Conread position:
               
415-652
               

               
Cow position:
               
chr2:50353027-50352779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
415-658
               

               
Cow position:
               
chr2:12558402-12558644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
111, 11
               

               
Conread position:
               
415-678
               

               
Cow position:
               
chr2:65932100-65931829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
415-680
               

               
Cow position:
               
chr2:28303454-28303183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 159
               

               
Conread position:
               
415-680
               

               
Cow position:
               
chr2:31784062-31783800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
415-681
               

               
Cow position:
               
chr2:6697368-6697632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
7, 59
               

               
Conread position:
               
415-681
               

               
Cow position:
               
chr2:17940153-17940425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
27, 97
               

               
Conread position:
               
415-681
               

               
Cow position:
               
chr2:26851297-26851021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
158, 87
               

               
Conread position:
               
415-681
               

               
Cow position:
               
chr2:38273685-38273403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
13, 45
               

               
Conread position:
               
415-681
               

               
Cow position:
               
chr2:40488941-40488678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
27, 146
               

               
Conread position:
               
415-681
               

               
Cow position:
               
chr2:85339324-85339597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
50, 26
               

               
Conread position:
               
415-682
               

               
Cow position:
               
chr2:40402892-40403161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
27, 175
               

               
Conread position:
               
415-684
               

               
Cow position:
               
chr2:43907054-43907326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 77
               

               
Conread position:
               
415-684
               

               
Cow position:
               
chr2:44025514-44025231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
23, 101
               

               
Conread position:
               
416-609
               

               
Cow position:
               
chr2:43444729-43444530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
416-666
               

               
Cow position:
               
chr2:40803133-40802881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
92, 114
               

               
Conread position:
               
416-675
               

               
Cow position:
               
chr2:84970581-84970841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
111, 17
               

               
Conread position:
               
416-679
               

               
Cow position:
               
chr2:39598095-39597827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
78, 40
               

               
Conread position:
               
416-681
               

               
Cow position:
               
chr2:18061493-18061764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
8, 48
               

               
Conread position:
               
416-681
               

               
Cow position:
               
chr2:45935834-45936095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
43, 10
               

               
Conread position:
               
416-681
               

               
Cow position:
               
chr2:76969047-76969311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
416-684
               

               
Cow position:
               
chr2:27337647-27337918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
157, 15
               

               
Conread position:
               
417-571
               

               
Cow position:
               
chr2:55831521-55831674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
417-681
               

               
Cow position:
               
chr2:425945-425676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
417-681
               

               
Cow position:
               
chr2:13582715-13582444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
156, 82
               

               
Conread position:
               
419-571
               

               
Cow position:
               
chr2:46162088-46161935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
419-659
               

               
Cow position:
               
chr2:4016717-4016955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
17, 94
               

               
Conread position:
               
419-675
               

               
Cow position:
               
chr2:54810725-54810986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
148, 85
               

               
Conread position:
               
419-681
               

               
Cow position:
               
chr2:17966898-17967167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 127
               

               
Conread position:
               
419-681
               

               
Cow position:
               
chr2:18997850-18997587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
23, 139
               

               
Conread position:
               
419-681
               

               
Cow position:
               
chr2:44229563-44229826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
23, 44
               

               
Conread position:
               
419-681
               

               
Cow position:
               
chr2:45542268-45542533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
419-682
               

               
Cow position:
               
chr2:28710873-28711129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
23, 61
               

               
Conread position:
               
419-682
               

               
Cow position:
               
chr2:42608199-42607927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
419-684
               

               
Cow position:
               
chr2:19211926-19212193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
23, 52
               

               
Conread position:
               
420-569
               

               
Cow position:
               
chr2:13013219-13013070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
420-610
               

               
Cow position:
               
chr2:66149458-66149263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
420-613
               

               
Cow position:
               
chr2:53500905-53501106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
420-657
               

               
Cow position:
               
chr2:12051277-12051038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
156, 13
               

               
Conread position:
               
420-675
               

               
Cow position:
               
chr2:45367421-45367162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
98, 17
               

               
Conread position:
               
420-680
               

               
Cow position:
               
chr2:80770247-80769981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
20, 108
               

               
Conread position:
               
420-681
               

               
Cow position:
               
chr2:15250308-15250043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
152, 15
               

               
Conread position:
               
420-681
               

               
Cow position:
               
chr2:38362236-38362506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 70
               

               
Conread position:
               
420-681
               

               
Cow position:
               
chr2:39815155-39815421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
151, 204
               

               
Conread position:
               
420-681
               

               
Cow position:
               
chr2:42192567-42192296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
22, 52
               

               
Conread position:
               
420-681
               

               
Cow position:
               
chr2:45912502-45912772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
420-681
               

               
Cow position:
               
chr2:51799197-51799460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
22, 74
               

               
Conread position:
               
420-682
               

               
Cow position:
               
chr2:15674670-15674407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
22, 37
               

               
Conread position:
               
422-681
               

               
Cow position:
               
chr2:11697252-11696995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
147, 42
               

               
Conread position:
               
422-681
               

               
Cow position:
               
chr2:15329512-15329255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
13, 94
               

               
Conread position:
               
425-670
               

               
Cow position:
               
chr2:80865732-80865981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
426-662
               

               
Cow position:
               
chr2:14734227-14733997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
145, 25
               

               
Conread position:
               
426-675
               

               
Cow position:
               
chr2:69823714-69823454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
426-681
               

               
Cow position:
               
chr2:47990559-47990297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
145, 11
               

               
Conread position:
               
426-681
               

               
Cow position:
               
chr2:48361696-48361433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
427-570
               

               
Cow position:
               
chr2:43372206-43372346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
15, 102
               

               
Conread position:
               
427-645
               

               
Cow position:
               
chr2:24530491-24530272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 215
               

               
Conread position:
               
427-675
               

               
Cow position:
               
chr2:44550727-44550972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
146, 87
               

               
Conread position:
               
427-679
               

               
Cow position:
               
chr2:33262496-33262753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
137, 6
               

               
Conread position:
               
427-680
               

               
Cow position:
               
chr2:41185579-41185336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
9, 53
               

               
Conread position:
               
427-681
               

               
Cow position:
               
chr2:777564-777830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
427-681
               

               
Cow position:
               
chr2:22371829-22372085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
15, 170
               

               
Conread position:
               
427-681
               

               
Cow position:
               
chr2:32416737-32416993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
428-674
               

               
Cow position:
               
chr2:32446221-32446464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
428-681
               

               
Cow position:
               
chr2:549209-549466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
140, 86
               

               
Conread position:
               
429-581
               

               
Cow position:
               
chr2:45138315-45138468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
13, 71
               

               
Conread position:
               
429-681
               

               
Cow position:
               
chr2:10655737-10655990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
143, 62
               

               
Conread position:
               
429-681
               

               
Cow position:
               
chr2:37009530-37009278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
172, 155
               

               
Conread position:
               
429-681
               

               
Cow position:
               
chr2:79404211-79403962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
102, 66
               

               
Conread position:
               
430-681
               

               
Cow position:
               
chr2:41057405-41057649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
431-543
               

               
Cow position:
               
chr2:13725519-13725632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
431-654
               

               
Cow position:
               
chr2:68109623-68109839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
431-657
               

               
Cow position:
               
chr2:387657-387888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
431-664
               

               
Cow position:
               
chr2:13935826-13935587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
431-673
               

               
Cow position:
               
chr2:14901253-14901012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
8, 30
               

               
Conread position:
               
431-673
               

               
Cow position:
               
chr2:16018113-16018353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
11, 184
               

               
Conread position:
               
431-673
               

               
Cow position:
               
chr2:42293369-42293121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
431-678
               

               
Cow position:
               
chr2:38658668-38658912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
11, 136
               

               
Conread position:
               
431-681
               

               
Cow position:
               
chr2:23847717-23847963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
146, 64
               

               
Conread position:
               
431-681
               

               
Cow position:
               
chr2:26500815-26501072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
431-681
               

               
Cow position:
               
chr2:29802017-29802250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 84
               

               
Conread position:
               
431-681
               

               
Cow position:
               
chr2:47056026-47055770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
10, 82
               

               
Conread position:
               
431-684
               

               
Cow position:
               
chr2:18858027-18858285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
141, 45
               

               
Conread position:
               
432-679
               

               
Cow position:
               
chr2:26042124-26042377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
151, 29
               

               
Conread position:
               
432-681
               

               
Cow position:
               
chr2:992274-992017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
12, 224
               

               
Conread position:
               
433-571
               

               
Cow position:
               
chr2:38205641-38205780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
433-680
               

               
Cow position:
               
chr2:50793863-50793605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
8, 30
               

               
Conread position:
               
433-681
               

               
Cow position:
               
chr2:30640312-30640051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
8, 207
               

               
Conread position:
               
433-681
               

               
Cow position:
               
chr2:36436322-36436067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
138, 24
               

               
Conread position:
               
433-681
               

               
Cow position:
               
chr2:70704374-70704117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
433-682
               

               
Cow position:
               
chr2:11734640-11734379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
9, 180
               

               
Conread position:
               
434-675
               

               
Cow position:
               
chr2:52171366-52171128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
135, 39
               

               
Conread position:
               
434-681
               

               
Cow position:
               
chr2:13604585-13604330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
435-616
               

               
Cow position:
               
chr2:24726374-24726188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
435-673
               

               
Cow position:
               
chr2:39489888-39489653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
142, 100
               

               
Conread position:
               
435-674
               

               
Cow position:
               
chr2:46052614-46052376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
5, 96
               

               
Conread position:
               
435-680
               

               
Cow position:
               
chr2:47148020-47147772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
435-681
               

               
Cow position:
               
chr2:4383781-4384034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
435-681
               

               
Cow position:
               
chr2:7573390-7573643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
7, 75
               

               
Conread position:
               
435-681
               

               
Cow position:
               
chr2:14555638-14555888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
139, 79
               

               
Conread position:
               
435-681
               

               
Cow position:
               
chr2:50580476-50580234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
205, 21
               

               
Conread position:
               
435-681
               

               
Cow position:
               
chr2:70306256-70306024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 27
               

               
Conread position:
               
435-684
               

               
Cow position:
               
chr2:61485738-61485488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
7, 192
               

               
Conread position:
               
436-603
               

               
Cow position:
               
chr2:64213175-64213002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
128, 78
               

               
Conread position:
               
436-680
               

               
Cow position:
               
chr2:39237525-39237281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
136, 50
               

               
Conread position:
               
436-681
               

               
Cow position:
               
chr2:47115806-47116053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
138, 216
               

               
Conread position:
               
436-681
               

               
Cow position:
               
chr2:50408786-50408543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
135, 79
               

               
Conread position:
               
437-555
               

               
Cow position:
               
chr2:40058627-40058745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
437-566
               

               
Cow position:
               
chr2:60368428-60368299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
437-571
               

               
Cow position:
               
chr2:71486890-71486756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
437-582
               

               
Cow position:
               
chr2:10790283-10790137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
437-610
               

               
Cow position:
               
chr2:65890514-65890689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
136, 87
               

               
Conread position:
               
437-610
               

               
Cow position:
               
chr2:80177479-80177656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
133, 61
               

               
Conread position:
               
437-611
               

               
Cow position:
               
chr2:13645430-13645252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
133, 20
               

               
Conread position:
               
437-621
               

               
Cow position:
               
chr2:60429392-60429201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
136, 33
               

               
Conread position:
               
437-644
               

               
Cow position:
               
chr2:58035219-58035004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
126, 190
               

               
Conread position:
               
437-645
               

               
Cow position:
               
chr2:13271306-13271522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 108
               

               
Conread position:
               
437-647
               

               
Cow position:
               
chr2:46971236-46971015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
437-651
               

               
Cow position:
               
chr2:38886528-38886743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
437-653
               

               
Cow position:
               
chr2:21049218-21049425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
437-657
               

               
Cow position:
               
chr2:43123451-43123224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
437-658
               

               
Cow position:
               
chr2:42183484-42183259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
132, 190
               

               
Conread position:
               
437-660
               

               
Cow position:
               
chr2:32989658-32989884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
93, 22
               

               
Conread position:
               
437-661
               

               
Cow position:
               
chr2:70908216-70908433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
67, 93
               

               
Conread position:
               
437-664
               

               
Cow position:
               
chr2:40257300-40257535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
133, 225
               

               
Conread position:
               
437-665
               

               
Cow position:
               
chr2:44222936-44222700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
437-667
               

               
Cow position:
               
chr2:45478485-45478709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
135, 160
               

               
Conread position:
               
437-671
               

               
Cow position:
               
chr2:17409895-17410133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
437-673
               

               
Cow position:
               
chr2:31457606-31457356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
437-673
               

               
Cow position:
               
chr2:72407387-72407621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
134, 37
               

               
Conread position:
               
437-675
               

               
Cow position:
               
chr2:13709581-13709339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
437-675
               

               
Cow position:
               
chr2:24218104-24218347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
144, 136
               

               
Conread position:
               
437-675
               

               
Cow position:
               
chr2:44482543-44482779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
137, 44
               

               
Conread position:
               
437-678
               

               
Cow position:
               
chr2:15166288-15166062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
140, 24
               

               
Conread position:
               
437-678
               

               
Cow position:
               
chr2:39941587-39941355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
437-679
               

               
Cow position:
               
chr2:17341997-17341765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
437-679
               

               
Cow position:
               
chr2:56846859-56846617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
183, 83
               

               
Conread position:
               
437-679
               

               
Cow position:
               
chr2:70495380-70495137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
140, 42
               

               
Conread position:
               
437-680
               

               
Cow position:
               
chr2:5130342-5130588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 53
               

               
Conread position:
               
437-680
               

               
Cow position:
               
chr2:14710008-14710245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
217, 101
               

               
Conread position:
               
437-680
               

               
Cow position:
               
chr2:18621528-18621274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
92, 219
               

               
Conread position:
               
437-680
               

               
Cow position:
               
chr2:47624295-47624538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
136, 77
               

               
Conread position:
               
437-680
               

               
Cow position:
               
chr2:74260568-74260319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
129, 44
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:1638715-1638464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
137, 73
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:7383577-7383819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
217, 24
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:7524020-7524275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:9369809-9370052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
67, 40
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:14854417-14854177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
146, 83
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:16428289-16428535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
130, 75
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:20362543-20362782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
158, 81
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:26102879-26102642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
219, 181
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:39564465-39564219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
134, 56
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:39584560-39584316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
131, 19
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:41248682-41248429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
136, 10
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:42255547-42255299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
142, 242
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:44232341-44232590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
137, 74
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:45535578-45535327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
135, 218
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:45574892-45575132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
17, 41
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:46120529-46120770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
7, 90
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:46230650-46230901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:46247349-46247597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:47073299-47073053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
99, 111
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:54971291-54971042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
92, 190
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:60910302-60910062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:63331690-63331947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
47, 179
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:68487894-68488143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
135, 115
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:69747504-69747757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:70579592-70579846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
132, 47
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:70664129-70663875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:73282462-73282696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
231, 83
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:80963538-80963785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
136, 83
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:81388802-81388554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
136, 66
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:82262263-82262517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr2:83410618-83410372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
19, 88
               

               
Conread position:
               
437-682
               

               
Cow position:
               
chr2:6901888-6901639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
134, 92
               

               
Conread position:
               
437-682
               

               
Cow position:
               
chr2:33659590-33659841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
17, 25
               

               
Conread position:
               
437-682
               

               
Cow position:
               
chr2:41314005-41313753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
132, 47
               

               
Conread position:
               
437-684
               

               
Cow position:
               
chr2:76110508-76110255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
133, 116
               

               
Conread position:
               
438-638
               

               
Cow position:
               
chr2:65036175-65036378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
132, 23
               

               
Conread position:
               
438-653
               

               
Cow position:
               
chr2:77282130-77281910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
133, 18
               

               
Conread position:
               
438-658
               

               
Cow position:
               
chr2:48634934-48635159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
438-663
               

               
Cow position:
               
chr2:56056859-56056627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
66, 102
               

               
Conread position:
               
438-675
               

               
Cow position:
               
chr2:36575846-36575608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
219, 0
               

               
Conread position:
               
438-681
               

               
Cow position:
               
chr2:17328861-17328610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
438-681
               

               
Cow position:
               
chr2:25283226-25282973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
438-681
               

               
Cow position:
               
chr2:26438613-26438863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
17, 87
               

               
Conread position:
               
439-664
               

               
Cow position:
               
chr2:9098604-9098836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
106, 208
               

               
Conread position:
               
440-650
               

               
Cow position:
               
chr2:22113588-22113809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
99, 16
               

               
Conread position:
               
440-678
               

               
Cow position:
               
chr2:53532703-53532943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
127, 186
               

               
Conread position:
               
440-679
               

               
Cow position:
               
chr2:76764595-76764840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
13, 132
               

               
Conread position:
               
440-680
               

               
Cow position:
               
chr2:69367016-69367267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
440-681
               

               
Cow position:
               
chr2:6281915-6282157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
131, 39
               

               
Conread position:
               
441-656
               

               
Cow position:
               
chr2:24859120-24858895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
86, 23
               

               
Conread position:
               
441-656
               

               
Cow position:
               
chr2:51638659-51638443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
28, 84
               

               
Conread position:
               
441-675
               

               
Cow position:
               
chr2:45439542-45439310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
18, 36
               

               
Conread position:
               
441-677
               

               
Cow position:
               
chr2:44005063-44004823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
130, 42
               

               
Conread position:
               
441-681
               

               
Cow position:
               
chr2:192359-192597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
130, 23
               

               
Conread position:
               
441-681
               

               
Cow position:
               
chr2:23270825-23271072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
130, 112
               

               
Conread position:
               
441-681
               

               
Cow position:
               
chr2:54968115-54967868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
130, 15
               

               
Conread position:
               
441-681
               

               
Cow position:
               
chr2:81348769-81349019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
443-643
               

               
Cow position:
               
chr2:78197974-78197773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
443-679
               

               
Cow position:
               
chr2:1487277-1487034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
443-680
               

               
Cow position:
               
chr2:41185164-41184924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 184
               

               
Conread position:
               
443-681
               

               
Cow position:
               
chr2:17114624-17114870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
140, 98
               

               
Conread position:
               
443-681
               

               
Cow position:
               
chr2:19286976-19287215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
76, 83
               

               
Conread position:
               
443-681
               

               
Cow position:
               
chr2:39334765-39335003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
94, 118
               

               
Conread position:
               
443-681
               

               
Cow position:
               
chr2:41452339-41452094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
129, 105
               

               
Conread position:
               
443-681
               

               
Cow position:
               
chr2:41461475-41461230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
129, 183
               

               
Conread position:
               
443-681
               

               
Cow position:
               
chr2:44170664-44170422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
124, 14
               

               
Conread position:
               
443-681
               

               
Cow position:
               
chr2:46194887-46194657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
131, 53
               

               
Conread position:
               
443-681
               

               
Cow position:
               
chr2:50278128-50277886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
101, 36
               

               
Conread position:
               
443-681
               

               
Cow position:
               
chr2:75600829-75600579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
444-661
               

               
Cow position:
               
chr2:55062982-55062768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
129, 54
               

               
Conread position:
               
444-682
               

               
Cow position:
               
chr2:60462724-60462959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
53, 37
               

               
Conread position:
               
444-682
               

               
Cow position:
               
chr2:60468103-60468338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
53, 37
               

               
Conread position:
               
445-681
               

               
Cow position:
               
chr2:41019105-41019352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
448-684
               

               
Cow position:
               
chr2:70945505-70945263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
123, 172
               

               
Conread position:
               
449-657
               

               
Cow position:
               
chr2:26170845-26170632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
115, 142
               

               
Conread position:
               
450-650
               

               
Cow position:
               
chr2:28653436-28653636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
451-653
               

               
Cow position:
               
chr2:26880180-26879973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
123, 77
               

               
Conread position:
               
453-670
               

               
Cow position:
               
chr2:45281745-45281524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
121, 15
               

               
Conread position:
               
453-681
               

               
Cow position:
               
chr2:5999043-5998808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
453-681
               

               
Cow position:
               
chr2:46293951-46294175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
455-674
               

               
Cow position:
               
chr2:16564771-16564555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
116, 21
               

               
Conread position:
               
456-632
               

               
Cow position:
               
chr2:52747227-52747410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
456-681
               

               
Cow position:
               
chr2:9325092-9324858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
115, 148
               

               
Conread position:
               
457-681
               

               
Cow position:
               
chr2:28318780-28318992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
457-682
               

               
Cow position:
               
chr2:988779-988555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
14, 62
               

               
Conread position:
               
460-681
               

               
Cow position:
               
chr2:45880691-45880916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 12
               

               
Conread position:
               
461-675
               

               
Cow position:
               
chr2:82311112-82311333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
108, 10
               

               
Conread position:
               
463-681
               

               
Cow position:
               
chr2:62309344-62309566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
102, 21
               

               
Conread position:
               
464-681
               

               
Cow position:
               
chr2:21416382-21416168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
109, 50
               

               
Conread position:
               
468-681
               

               
Cow position:
               
chr2:21656-21876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
89, 28
               

               
Conread position:
               
475-675
               

               
Cow position:
               
chr2:5297811-5297611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
162, 103
               

               
Conread position:
               
484-681
               

               
Cow position:
               
chr2:4273200-4273407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
488-671
               

               
Cow position:
               
chr2:34535096-34535287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
488-671
               

               
Cow position:
               
chr2:67313628-67313817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
489-657
               

               
Cow position:
               
chr2:36936049-36936213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
489-681
               

               
Cow position:
               
chr2:40691542-40691351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
74, 35
               

               
Conread position:
               
494-681
               

               
Cow position:
               
chr2:46175205-46175393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
92, 130
               

               
Conread position:
               
496-681
               

               
Cow position:
               
chr2:11617148-11616958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
496-681
               

               
Cow position:
               
chr2:11806372-11806185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
499-681
               

               
Cow position:
               
chr2:23493585-23493399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
80, 20
               

               
Conread position:
               
515-673
               

               
Cow position:
               
chr2:58563798-58563960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
59, 89
               

               
Conread position:
               
517-680
               

               
Cow position:
               
chr2:40882104-40881940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
517-681
               

               
Cow position:
               
chr2:78220131-78219960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
53, 151
               

               
Conread position:
               
530-680
               

               
Cow position:
               
chr2:36007567-36007722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
536-671
               

               
Cow position:
               
chr2:26555580-26555714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
47, 21
               

               
Conread position:
               
536-677
               

               
Cow position:
               
chr2:333089-333219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
536-681
               

               
Cow position:
               
chr2:58247862-58248012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
38, 66
               

               
Conread position:
               
536-681
               

               
Cow position:
               
chr2:77378257-77378108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
536-681
               

               
Cow position:
               
chr2:80797678-80797533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
538-675
               

               
Cow position:
               
chr2:61187122-61187260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
45, 71
               

               
Conread position:
               
539-681
               

               
Cow position:
               
chr2:39384864-39385009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
32, 63
               

               
Conread position:
               
541-682
               

               
Cow position:
               
chr2:51824933-51824785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
587-681
               

               
Cow position:
               
chr2:42599888-42599794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
95
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.