Cow genome map

Conread name: Ss1.1-Pig4-TMW8061H12.3

Conread position: 327-681
Cow position:
Alignm length: 370
Alignm identity: 246
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 21, 46

Conread position: 329-520
Cow position:
Alignm length: 196
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 22

Conread position: 329-609
Cow position:
Alignm length: 290
Alignm identity: 204
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 9, 42

Conread position: 332-675
Cow position:
Alignm length: 359
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 38

Conread position: 334-518
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 178, 36

Conread position: 334-657
Cow position:
Alignm length: 332
Alignm identity: 221
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 240, 35

Conread position: 335-571
Cow position:
Alignm length: 240
Alignm identity: 159
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 42, 17

Conread position: 335-578
Cow position:
Alignm length: 244
Alignm identity: 163
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 335-680
Cow position:
Alignm length: 351
Alignm identity: 246
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 107, 34

Conread position: 335-681
Cow position:
Alignm length: 368
Alignm identity: 255
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 73, 35

Conread position: 336-684
Cow position:
Alignm length: 368
Alignm identity: 242
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 13, 37

Conread position: 337-569
Cow position:
Alignm length: 236
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 78

Conread position: 337-649
Cow position:
Alignm length: 318
Alignm identity: 207
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 68

Conread position: 337-673
Cow position:
Alignm length: 341
Alignm identity: 233
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 42, 32

Conread position: 337-681
Cow position:
Alignm length: 354
Alignm identity: 241
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 42, 32

Conread position: 338-676
Cow position:
Alignm length: 372
Alignm identity: 262
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 44, 31

Conread position: 338-680
Cow position:
Alignm length: 353
Alignm identity: 256
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 39, 6

Conread position: 341-652
Cow position:
Alignm length: 314
Alignm identity: 213
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 104, 29

Conread position: 345-582
Cow position:
Alignm length: 240
Alignm identity: 167
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 81

Conread position: 347-551
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 13, 25

Conread position: 347-653
Cow position:
Alignm length: 311
Alignm identity: 210
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 43, 19

Conread position: 347-675
Cow position:
Alignm length: 338
Alignm identity: 232
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 25, 68

Conread position: 347-679
Cow position:
Alignm length: 347
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 194

Conread position: 347-681
Cow position:
Alignm length: 354
Alignm identity: 232
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 35, 22

Conread position: 347-681
Cow position:
Alignm length: 350
Alignm identity: 233
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 95, 22

Conread position: 347-684
Cow position:
Alignm length: 350
Alignm identity: 235
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 34, 22

Conread position: 348-551
Cow position:
Alignm length: 205
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 21

Conread position: 348-571
Cow position:
Alignm length: 225
Alignm identity: 151
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 98, 21

Conread position: 348-576
Cow position:
Alignm length: 231
Alignm identity: 159
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 17

Conread position: 348-652
Cow position:
Alignm length: 314
Alignm identity: 224
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 113, 21

Conread position: 348-675
Cow position:
Alignm length: 337
Alignm identity: 232
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 146, 21

Conread position: 348-675
Cow position:
Alignm length: 335
Alignm identity: 234
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 21, 67

Conread position: 348-681
Cow position:
Alignm length: 341
Alignm identity: 232
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 34, 18

Conread position: 348-681
Cow position:
Alignm length: 344
Alignm identity: 229
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 31, 22

Conread position: 348-684
Cow position:
Alignm length: 345
Alignm identity: 227
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 34, 21

Conread position: 348-684
Cow position:
Alignm length: 360
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 21

Conread position: 349-681
Cow position:
Alignm length: 337
Alignm identity: 217
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 20

Conread position: 350-681
Cow position:
Alignm length: 343
Alignm identity: 235
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 23, 65

Conread position: 376-675
Cow position:
Alignm length: 314
Alignm identity: 221
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 45, 24

Conread position: 378-577
Cow position:
Alignm length: 200
Alignm identity: 144
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 381-571
Cow position:
Alignm length: 193
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 146, 33

Conread position: 381-656
Cow position:
Alignm length: 283
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 44

Conread position: 381-658
Cow position:
Alignm length: 293
Alignm identity: 207
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 28, 115

Conread position: 381-665
Cow position:
Alignm length: 287
Alignm identity: 199
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 197, 42

Conread position: 381-673
Cow position:
Alignm length: 300
Alignm identity: 203
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 190, 45

Conread position: 381-681
Cow position:
Alignm length: 322
Alignm identity: 222
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 192, 31

Conread position: 381-681
Cow position:
Alignm length: 311
Alignm identity: 207
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 193, 45

Conread position: 381-681
Cow position:
Alignm length: 310
Alignm identity: 201
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 190, 21

Conread position: 382-681
Cow position:
Alignm length: 311
Alignm identity: 203
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 188, 30

Conread position: 384-680
Cow position:
Alignm length: 307
Alignm identity: 221
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 36, 9

Conread position: 386-681
Cow position:
Alignm length: 315
Alignm identity: 207
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 52, 221

Conread position: 386-681
Cow position:
Alignm length: 304
Alignm identity: 198
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 174, 45

Conread position: 386-681
Cow position:
Alignm length: 300
Alignm identity: 198
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 187, 28

Conread position: 388-581
Cow position:
Alignm length: 196
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 106, 41

Conread position: 388-664
Cow position:
Alignm length: 287
Alignm identity: 194
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 183, 38

Conread position: 395-681
Cow position:
Alignm length: 295
Alignm identity: 196
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 47, 198

Conread position: 398-586
Cow position:
Alignm length: 192
Alignm identity: 136
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 28, 16

Conread position: 404-643
Cow position:
Alignm length: 249
Alignm identity: 171
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 17, 59

Conread position: 407-571
Cow position:
Alignm length: 166
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 98

Conread position: 407-660
Cow position:
Alignm length: 268
Alignm identity: 190
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 166, 0

Conread position: 407-681
Cow position:
Alignm length: 281
Alignm identity: 201
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 164, 96

Conread position: 407-681
Cow position:
Alignm length: 283
Alignm identity: 205
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 35, 0

Conread position: 407-684
Cow position:
Alignm length: 288
Alignm identity: 200
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 154, 0

Conread position: 408-652
Cow position:
Alignm length: 249
Alignm identity: 171
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 166, 0

Conread position: 409-658
Cow position:
Alignm length: 252
Alignm identity: 182
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 172, 28

Conread position: 415-571
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 36, 16

Conread position: 415-673
Cow position:
Alignm length: 265
Alignm identity: 184
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 156, 251

Conread position: 415-681
Cow position:
Alignm length: 274
Alignm identity: 197
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 27, 9

Conread position: 417-644
Cow position:
Alignm length: 230
Alignm identity: 162
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 92

Conread position: 417-651
Cow position:
Alignm length: 236
Alignm identity: 166
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 25, 97

Conread position: 417-681
Cow position:
Alignm length: 266
Alignm identity: 181
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 245, 94

Conread position: 418-675
Cow position:
Alignm length: 267
Alignm identity: 179
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 163, 252

Conread position: 418-680
Cow position:
Alignm length: 271
Alignm identity: 196
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 152, 186

Conread position: 419-684
Cow position:
Alignm length: 276
Alignm identity: 186
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 92

Conread position: 420-637
Cow position:
Alignm length: 219
Alignm identity: 159
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 151

Conread position: 420-671
Cow position:
Alignm length: 263
Alignm identity: 191
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 16, 101

Conread position: 420-673
Cow position:
Alignm length: 265
Alignm identity: 196
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 74, 127

Conread position: 420-673
Cow position:
Alignm length: 266
Alignm identity: 193
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 24, 0

Conread position: 420-681
Cow position:
Alignm length: 269
Alignm identity: 199
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 77, 20

Conread position: 420-681
Cow position:
Alignm length: 271
Alignm identity: 192
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 154, 11

Conread position: 420-681
Cow position:
Alignm length: 269
Alignm identity: 181
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 41

Conread position: 421-681
Cow position:
Alignm length: 267
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 119

Conread position: 423-679
Cow position:
Alignm length: 267
Alignm identity: 197
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 19, 69

Conread position: 423-679
Cow position:
Alignm length: 266
Alignm identity: 179
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 157, 7

Conread position: 425-684
Cow position:
Alignm length: 274
Alignm identity: 199
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 17, 70

Conread position: 427-566
Cow position:
Alignm length: 141
Alignm identity: 105
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 15, 50

Conread position: 427-600
Cow position:
Alignm length: 179
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 146, 0

Conread position: 427-681
Cow position:
Alignm length: 271
Alignm identity: 194
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 14, 90

Conread position: 428-675
Cow position:
Alignm length: 251
Alignm identity: 169
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 183, 23

Conread position: 430-664
Cow position:
Alignm length: 243
Alignm identity: 174
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 66, 7

Conread position: 431-638
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 140, 10

Conread position: 431-658
Cow position:
Alignm length: 236
Alignm identity: 165
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 11, 26

Conread position: 431-684
Cow position:
Alignm length: 264
Alignm identity: 196
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 11, 0

Conread position: 432-537
Cow position:
Alignm length: 106
Alignm identity: 88
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 432-679
Cow position:
Alignm length: 253
Alignm identity: 172
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 10, 80

Conread position: 437-585
Cow position:
Alignm length: 149
Alignm identity: 108
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 133, 0

Conread position: 437-650
Cow position:
Alignm length: 221
Alignm identity: 152
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 130, 188

Conread position: 437-672
Cow position:
Alignm length: 247
Alignm identity: 178
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 134, 108

Conread position: 437-675
Cow position:
Alignm length: 245
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 134, 62

Conread position: 437-679
Cow position:
Alignm length: 247
Alignm identity: 164
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 174, 136

Conread position: 437-681
Cow position:
Alignm length: 259
Alignm identity: 184
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 134, 223

Conread position: 437-681
Cow position:
Alignm length: 259
Alignm identity: 180
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 25

Conread position: 437-681
Cow position:
Alignm length: 255
Alignm identity: 190
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 136, 166

Conread position: 437-681
Cow position:
Alignm length: 247
Alignm identity: 168
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 216, 86

Conread position: 437-684
Cow position:
Alignm length: 252
Alignm identity: 180
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 67, 163

Conread position: 438-638
Cow position:
Alignm length: 202
Alignm identity: 151
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 135, 0

Conread position: 438-675
Cow position:
Alignm length: 249
Alignm identity: 185
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 133, 75

Conread position: 438-680
Cow position:
Alignm length: 248
Alignm identity: 166
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 141, 32

Conread position: 438-681
Cow position:
Alignm length: 255
Alignm identity: 186
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 133, 239

Conread position: 438-681
Cow position:
Alignm length: 250
Alignm identity: 170
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 134, 0

Conread position: 440-682
Cow position:
Alignm length: 245
Alignm identity: 159
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 144, 157

Conread position: 441-664
Cow position:
Alignm length: 230
Alignm identity: 167
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 131, 55

Conread position: 441-677
Cow position:
Alignm length: 239
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 13, 21

Conread position: 443-664
Cow position:
Alignm length: 232
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 16

Conread position: 443-679
Cow position:
Alignm length: 245
Alignm identity: 165
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 124, 71

Conread position: 443-681
Cow position:
Alignm length: 249
Alignm identity: 172
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 443-681
Cow position:
Alignm length: 240
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 152, 81

Conread position: 445-681
Cow position:
Alignm length: 237
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 453-681
Cow position:
Alignm length: 235
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 120, 8

Conread position: 455-681
Cow position:
Alignm length: 228
Alignm identity: 156
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 139, 40

Conread position: 461-667
Cow position:
Alignm length: 210
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 464-615
Cow position:
Alignm length: 159
Alignm identity: 122
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 109, 0

Conread position: 473-681
Cow position:
Alignm length: 215
Alignm identity: 150
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 101, 20

Conread position: 475-669
Cow position:
Alignm length: 201
Alignm identity: 139
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 479-658
Cow position:
Alignm length: 189
Alignm identity: 146
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 96, 0

Conread position: 482-676
Cow position:
Alignm length: 202
Alignm identity: 151
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 91, 0

Conread position: 482-680
Cow position:
Alignm length: 200
Alignm identity: 138
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 184, 82

Conread position: 482-681
Cow position:
Alignm length: 211
Alignm identity: 146
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 82, 144

Conread position: 483-681
Cow position:
Alignm length: 210
Alignm identity: 146
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 62, 40

Conread position: 500-681
Cow position:
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 507-681
Cow position:
Alignm length: 175
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 515-681
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 29, 108

Conread position: 519-681
Cow position:
Alignm length: 167
Alignm identity: 132
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 62, 54

Conread position: 524-650
Cow position:
Alignm length: 127
Alignm identity: 99
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 530-681
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 536-682
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 540-684
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 34, 0

Show alignments to all cow chromosomes.