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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8061H12.3
        

               
Conread position:
               
325-681
               

               
Cow position:
               
chr27:10979599-10979955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
66, 24
               

               
Conread position:
               
328-576
               

               
Cow position:
               
chr27:29319146-29319395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
54, 67
               

               
Conread position:
               
330-664
               

               
Cow position:
               
chr27:6924827-6925167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
51, 19
               

               
Conread position:
               
335-606
               

               
Cow position:
               
chr27:11561523-11561796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 90
               

               
Conread position:
               
335-661
               

               
Cow position:
               
chr27:13411620-13411287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
34, 81
               

               
Conread position:
               
335-675
               

               
Cow position:
               
chr27:29185099-29184749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 36
               

               
Conread position:
               
335-679
               

               
Cow position:
               
chr27:23594067-23594409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
47, 41
               

               
Conread position:
               
335-681
               

               
Cow position:
               
chr27:19387770-19388109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
48, 9
               

               
Conread position:
               
335-681
               

               
Cow position:
               
chr27:27438760-27438409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
38, 80
               

               
Conread position:
               
336-517
               

               
Cow position:
               
chr27:20490269-20490456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
13, 37
               

               
Conread position:
               
336-629
               

               
Cow position:
               
chr27:29593879-29593585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
43, 33
               

               
Conread position:
               
336-678
               

               
Cow position:
               
chr27:30914756-30915098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
33, 79
               

               
Conread position:
               
337-680
               

               
Cow position:
               
chr27:15378731-15378386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
46, 27
               

               
Conread position:
               
338-681
               

               
Cow position:
               
chr27:19546769-19546411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 6
               

               
Conread position:
               
344-609
               

               
Cow position:
               
chr27:25151846-25152105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
25, 90
               

               
Conread position:
               
345-531
               

               
Cow position:
               
chr27:21951222-21951039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 70
               

               
Conread position:
               
346-650
               

               
Cow position:
               
chr27:22220309-22220620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
346-681
               

               
Cow position:
               
chr27:16705012-16705342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
347-568
               

               
Cow position:
               
chr27:212711-212933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
21, 58
               

               
Conread position:
               
347-576
               

               
Cow position:
               
chr27:8790982-8790757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
347-607
               

               
Cow position:
               
chr27:20584707-20584436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
26, 118
               

               
Conread position:
               
347-659
               

               
Cow position:
               
chr27:22489033-22489351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
347-659
               

               
Cow position:
               
chr27:26481437-26481139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
35, 22
               

               
Conread position:
               
348-516
               

               
Cow position:
               
chr27:15434094-15434249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
348-582
               

               
Cow position:
               
chr27:24303704-24303936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
94, 66
               

               
Conread position:
               
348-586
               

               
Cow position:
               
chr27:6241431-6241198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 56
               

               
Conread position:
               
348-616
               

               
Cow position:
               
chr27:26794023-26793758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
348-634
               

               
Cow position:
               
chr27:20628820-20629108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
348-652
               

               
Cow position:
               
chr27:20514586-20514887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
227, 21
               

               
Conread position:
               
348-677
               

               
Cow position:
               
chr27:26087081-26087385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
348-679
               

               
Cow position:
               
chr27:19717659-19718015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr27:2592298-2592644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr27:10307542-10307203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr27:11480877-11480534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr27:13875494-13875826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr27:15867154-15867493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
31, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr27:17331253-17331594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
25, 117
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr27:18558119-18558455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
25, 78
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr27:25809755-25809420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr27:27020334-27020007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
230, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr27:30407286-30406942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
33, 21
               

               
Conread position:
               
348-681
               

               
Cow position:
               
chr27:30868990-30868647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
25, 67
               

               
Conread position:
               
349-570
               

               
Cow position:
               
chr27:29991697-29991469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 14
               

               
Conread position:
               
349-681
               

               
Cow position:
               
chr27:20354362-20354679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
19, 66
               

               
Conread position:
               
349-681
               

               
Cow position:
               
chr27:22171064-22171395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
32, 20
               

               
Conread position:
               
349-681
               

               
Cow position:
               
chr27:30872295-30871964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
350-624
               

               
Cow position:
               
chr27:5553235-5553509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
223, 20
               

               
Conread position:
               
350-658
               

               
Cow position:
               
chr27:16088554-16088881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
23, 118
               

               
Conread position:
               
350-681
               

               
Cow position:
               
chr27:21978380-21978041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
29, 20
               

               
Conread position:
               
350-681
               

               
Cow position:
               
chr27:22602938-22603266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
19, 169
               

               
Conread position:
               
352-684
               

               
Cow position:
               
chr27:22560061-22559723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
353-681
               

               
Cow position:
               
chr27:11435561-11435226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
355-684
               

               
Cow position:
               
chr27:6550227-6550555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 14
               

               
Conread position:
               
377-684
               

               
Cow position:
               
chr27:4386281-4385964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
20, 295
               

               
Conread position:
               
381-571
               

               
Cow position:
               
chr27:6674065-6674258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
30, 134
               

               
Conread position:
               
381-582
               

               
Cow position:
               
chr27:590972-590772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
61, 37
               

               
Conread position:
               
381-650
               

               
Cow position:
               
chr27:19660725-19660999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
184, 21
               

               
Conread position:
               
381-658
               

               
Cow position:
               
chr27:16965372-16965645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
61, 21
               

               
Conread position:
               
381-671
               

               
Cow position:
               
chr27:17995149-17994857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
67, 33
               

               
Conread position:
               
381-675
               

               
Cow position:
               
chr27:7935361-7935066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
125, 31
               

               
Conread position:
               
381-679
               

               
Cow position:
               
chr27:26188624-26188915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
239, 34
               

               
Conread position:
               
381-680
               

               
Cow position:
               
chr27:22454996-22454684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
381-680
               

               
Cow position:
               
chr27:23510772-23511084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
98, 121
               

               
Conread position:
               
381-681
               

               
Cow position:
               
chr27:18507444-18507735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
381-681
               

               
Cow position:
               
chr27:23554532-23554229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
194, 42
               

               
Conread position:
               
381-681
               

               
Cow position:
               
chr27:23890730-23891036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
192, 34
               

               
Conread position:
               
381-681
               

               
Cow position:
               
chr27:28922098-28921803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
135, 42
               

               
Conread position:
               
381-681
               

               
Cow position:
               
chr27:28932005-28931696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
136, 31
               

               
Conread position:
               
381-682
               

               
Cow position:
               
chr27:15925139-15925440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
198, 42
               

               
Conread position:
               
382-656
               

               
Cow position:
               
chr27:24227998-24227728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
129, 30
               

               
Conread position:
               
385-559
               

               
Cow position:
               
chr27:19452798-19452969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
385-681
               

               
Cow position:
               
chr27:426771-427064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
186, 27
               

               
Conread position:
               
386-675
               

               
Cow position:
               
chr27:30261093-30260803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
128, 26
               

               
Conread position:
               
386-681
               

               
Cow position:
               
chr27:8630071-8629778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
134, 8
               

               
Conread position:
               
386-681
               

               
Cow position:
               
chr27:15668972-15668675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
188, 26
               

               
Conread position:
               
386-681
               

               
Cow position:
               
chr27:22418962-22418673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
188, 16
               

               
Conread position:
               
393-681
               

               
Cow position:
               
chr27:27050105-27049816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
28, 34
               

               
Conread position:
               
402-658
               

               
Cow position:
               
chr27:20247993-20247735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
172, 9
               

               
Conread position:
               
405-658
               

               
Cow position:
               
chr27:1353393-1353659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
405-681
               

               
Cow position:
               
chr27:26226475-26226195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
158, 28
               

               
Conread position:
               
407-565
               

               
Cow position:
               
chr27:30489596-30489437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
407-583
               

               
Cow position:
               
chr27:30908488-30908661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
407-680
               

               
Cow position:
               
chr27:16589888-16589621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 167
               

               
Conread position:
               
407-681
               

               
Cow position:
               
chr27:15642989-15643267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
34, 83
               

               
Conread position:
               
407-681
               

               
Cow position:
               
chr27:22723878-22723608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
252, 160
               

               
Conread position:
               
407-682
               

               
Cow position:
               
chr27:26413439-26413157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
35, 10
               

               
Conread position:
               
407-684
               

               
Cow position:
               
chr27:30988612-30988895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
35, 104
               

               
Conread position:
               
408-628
               

               
Cow position:
               
chr27:17918499-17918273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
408-675
               

               
Cow position:
               
chr27:30359220-30359493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
30, 200
               

               
Conread position:
               
408-681
               

               
Cow position:
               
chr27:27064624-27064348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
37, 202
               

               
Conread position:
               
409-614
               

               
Cow position:
               
chr27:22423337-22423538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
409-648
               

               
Cow position:
               
chr27:6883850-6884082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
12, 30
               

               
Conread position:
               
410-582
               

               
Cow position:
               
chr27:27673200-27673026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
28, 118
               

               
Conread position:
               
410-681
               

               
Cow position:
               
chr27:23483047-23483320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
161, 19
               

               
Conread position:
               
410-681
               

               
Cow position:
               
chr27:23632416-23632693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
16, 112
               

               
Conread position:
               
414-652
               

               
Cow position:
               
chr27:20085378-20085630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
415-681
               

               
Cow position:
               
chr27:1768799-1768532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
118, 18
               

               
Conread position:
               
415-681
               

               
Cow position:
               
chr27:7731433-7731153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
152, 28
               

               
Conread position:
               
415-681
               

               
Cow position:
               
chr27:19544099-19543810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
9, 20
               

               
Conread position:
               
416-648
               

               
Cow position:
               
chr27:8062525-8062292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
151, 37
               

               
Conread position:
               
416-681
               

               
Cow position:
               
chr27:20037286-20037031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
417-681
               

               
Cow position:
               
chr27:27632772-27632515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
157, 16
               

               
Conread position:
               
418-677
               

               
Cow position:
               
chr27:29380680-29380950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
24, 112
               

               
Conread position:
               
418-681
               

               
Cow position:
               
chr27:2957239-2957496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
137, 25
               

               
Conread position:
               
419-628
               

               
Cow position:
               
chr27:10653511-10653728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
23, 55
               

               
Conread position:
               
419-658
               

               
Cow position:
               
chr27:15315345-15315577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
15, 104
               

               
Conread position:
               
419-680
               

               
Cow position:
               
chr27:17472639-17472907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
23, 76
               

               
Conread position:
               
419-680
               

               
Cow position:
               
chr27:31148588-31148855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
23, 38
               

               
Conread position:
               
419-681
               

               
Cow position:
               
chr27:536292-536554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
153, 25
               

               
Conread position:
               
420-648
               

               
Cow position:
               
chr27:17646341-17646111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
21, 205
               

               
Conread position:
               
420-648
               

               
Cow position:
               
chr27:20812732-20812967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
22, 190
               

               
Conread position:
               
420-673
               

               
Cow position:
               
chr27:23929794-23930061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
23, 64
               

               
Conread position:
               
420-675
               

               
Cow position:
               
chr27:28001987-28001720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
22, 50
               

               
Conread position:
               
420-681
               

               
Cow position:
               
chr27:8353308-8353568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
147, 21
               

               
Conread position:
               
420-681
               

               
Cow position:
               
chr27:14343620-14343371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
81, 21
               

               
Conread position:
               
420-681
               

               
Cow position:
               
chr27:22386704-22386965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
104, 21
               

               
Conread position:
               
420-681
               

               
Cow position:
               
chr27:24477242-24477508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
22, 146
               

               
Conread position:
               
421-681
               

               
Cow position:
               
chr27:15409208-15408948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 165
               

               
Conread position:
               
422-571
               

               
Cow position:
               
chr27:22245457-22245605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
26, 72
               

               
Conread position:
               
426-658
               

               
Cow position:
               
chr27:27039004-27038768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
16, 95
               

               
Conread position:
               
426-681
               

               
Cow position:
               
chr27:22330833-22330573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
16, 89
               

               
Conread position:
               
427-658
               

               
Cow position:
               
chr27:4944679-4944446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
159, 146
               

               
Conread position:
               
427-675
               

               
Cow position:
               
chr27:26807730-26807474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
14, 32
               

               
Conread position:
               
427-676
               

               
Cow position:
               
chr27:23882535-23882287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
15, 72
               

               
Conread position:
               
427-678
               

               
Cow position:
               
chr27:9169804-9169552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
12, 25
               

               
Conread position:
               
427-681
               

               
Cow position:
               
chr27:28245638-28245896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
77, 172
               

               
Conread position:
               
428-675
               

               
Cow position:
               
chr27:13251852-13252095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
52, 95
               

               
Conread position:
               
429-656
               

               
Cow position:
               
chr27:31017989-31017764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
13, 110
               

               
Conread position:
               
429-681
               

               
Cow position:
               
chr27:12246491-12246752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
150, 90
               

               
Conread position:
               
431-570
               

               
Cow position:
               
chr27:18435295-18435155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
431-679
               

               
Cow position:
               
chr27:22035538-22035284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
136, 176
               

               
Conread position:
               
431-681
               

               
Cow position:
               
chr27:22547557-22547313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
10, 59
               

               
Conread position:
               
431-681
               

               
Cow position:
               
chr27:22569623-22569867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
10, 42
               

               
Conread position:
               
431-684
               

               
Cow position:
               
chr27:21393668-21393403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
133, 207
               

               
Conread position:
               
432-679
               

               
Cow position:
               
chr27:18593113-18593360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
139, 88
               

               
Conread position:
               
432-681
               

               
Cow position:
               
chr27:24371082-24371330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
10, 55
               

               
Conread position:
               
433-681
               

               
Cow position:
               
chr27:19648102-19647844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
9, 105
               

               
Conread position:
               
434-678
               

               
Cow position:
               
chr27:14937587-14937332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
20, 28
               

               
Conread position:
               
435-681
               

               
Cow position:
               
chr27:26581594-26581340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
436-673
               

               
Cow position:
               
chr27:3306619-3306859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
139, 85
               

               
Conread position:
               
436-681
               

               
Cow position:
               
chr27:1498159-1498412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 88
               

               
Conread position:
               
436-681
               

               
Cow position:
               
chr27:19589317-19589566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 112
               

               
Conread position:
               
437-621
               

               
Cow position:
               
chr27:14303583-14303769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
134, 97
               

               
Conread position:
               
437-637
               

               
Cow position:
               
chr27:31386786-31386586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
102, 137
               

               
Conread position:
               
437-652
               

               
Cow position:
               
chr27:7974022-7974240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 19
               

               
Conread position:
               
437-652
               

               
Cow position:
               
chr27:26112070-26111843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
437-658
               

               
Cow position:
               
chr27:8942844-8942611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
437-675
               

               
Cow position:
               
chr27:13318129-13317869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
437-675
               

               
Cow position:
               
chr27:26509308-26509071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
134, 45
               

               
Conread position:
               
437-675
               

               
Cow position:
               
chr27:27554832-27554593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
142, 42
               

               
Conread position:
               
437-677
               

               
Cow position:
               
chr27:6541477-6541720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
437-679
               

               
Cow position:
               
chr27:14670537-14670291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
136, 151
               

               
Conread position:
               
437-680
               

               
Cow position:
               
chr27:12596622-12596859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 85
               

               
Conread position:
               
437-680
               

               
Cow position:
               
chr27:24331566-24331819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
137, 100
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr27:674185-673949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
90, 115
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr27:4390412-4390162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
91, 9
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr27:8168585-8168334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr27:17397609-17397355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr27:19685868-19685616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
98, 82
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr27:25276988-25277236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
134, 76
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr27:26299686-26299932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
8, 49
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr27:26490063-26489810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr27:27003413-27003181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr27:27641165-27640900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
136, 19
               

               
Conread position:
               
437-681
               

               
Cow position:
               
chr27:28518141-28518385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
96, 185
               

               
Conread position:
               
437-683
               

               
Cow position:
               
chr27:28260690-28260444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
131, 85
               

               
Conread position:
               
438-681
               

               
Cow position:
               
chr27:1637089-1636848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
140, 185
               

               
Conread position:
               
438-681
               

               
Cow position:
               
chr27:10992203-10992449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
133, 82
               

               
Conread position:
               
438-681
               

               
Cow position:
               
chr27:15319306-15319542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
133, 22
               

               
Conread position:
               
438-684
               

               
Cow position:
               
chr27:8263492-8263236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
18, 194
               

               
Conread position:
               
440-678
               

               
Cow position:
               
chr27:20637211-20636974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
142, 16
               

               
Conread position:
               
440-679
               

               
Cow position:
               
chr27:1122880-1123124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
127, 81
               

               
Conread position:
               
440-681
               

               
Cow position:
               
chr27:20283486-20283737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
64, 7
               

               
Conread position:
               
441-636
               

               
Cow position:
               
chr27:2847704-2847902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
132, 20
               

               
Conread position:
               
441-661
               

               
Cow position:
               
chr27:1291000-1290777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
131, 10
               

               
Conread position:
               
441-679
               

               
Cow position:
               
chr27:24509668-24509910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
135, 224
               

               
Conread position:
               
441-681
               

               
Cow position:
               
chr27:23735817-23736057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
139, 26
               

               
Conread position:
               
441-684
               

               
Cow position:
               
chr27:27270693-27270441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
98, 114
               

               
Conread position:
               
443-655
               

               
Cow position:
               
chr27:22225741-22225526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
123, 72
               

               
Conread position:
               
443-679
               

               
Cow position:
               
chr27:20481507-20481284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
113, 59
               

               
Conread position:
               
443-681
               

               
Cow position:
               
chr27:30354493-30354248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
444-675
               

               
Cow position:
               
chr27:20497058-20497303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
444-681
               

               
Cow position:
               
chr27:12191626-12191394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
215, 109
               

               
Conread position:
               
444-681
               

               
Cow position:
               
chr27:29831845-29831592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
444-683
               

               
Cow position:
               
chr27:30365171-30365408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
448-681
               

               
Cow position:
               
chr27:715357-715598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
123, 101
               

               
Conread position:
               
448-681
               

               
Cow position:
               
chr27:26428276-26428037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
453-677
               

               
Cow position:
               
chr27:5932771-5932553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
128, 88
               

               
Conread position:
               
454-682
               

               
Cow position:
               
chr27:1058813-1058587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
115, 19
               

               
Conread position:
               
461-648
               

               
Cow position:
               
chr27:21975922-21976111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
109, 137
               

               
Conread position:
               
464-679
               

               
Cow position:
               
chr27:30672686-30672470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
198, 0
               

               
Conread position:
               
464-681
               

               
Cow position:
               
chr27:4858767-4858551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
108, 155
               

               
Conread position:
               
471-676
               

               
Cow position:
               
chr27:706832-707041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
30, 44
               

               
Conread position:
               
471-680
               

               
Cow position:
               
chr27:6499940-6500155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
477-681
               

               
Cow position:
               
chr27:25379873-25380088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
480-681
               

               
Cow position:
               
chr27:24999852-24999643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
481-670
               

               
Cow position:
               
chr27:9090901-9090719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
96, 42
               

               
Conread position:
               
481-681
               

               
Cow position:
               
chr27:12429296-12429498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
48, 121
               

               
Conread position:
               
481-684
               

               
Cow position:
               
chr27:30362143-30362341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
92, 33
               

               
Conread position:
               
482-651
               

               
Cow position:
               
chr27:26786100-26785925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
23, 13
               

               
Conread position:
               
482-658
               

               
Cow position:
               
chr27:20056078-20055898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
524-672
               

               
Cow position:
               
chr27:21569908-21569755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
50, 66
               

               
Conread position:
               
524-681
               

               
Cow position:
               
chr27:6522976-6523138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
59, 49
               

               
Conread position:
               
530-681
               

               
Cow position:
               
chr27:14902715-14902557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
44, 152
               

               
Conread position:
               
530-681
               

               
Cow position:
               
chr27:20570057-20570217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
536-679
               

               
Cow position:
               
chr27:27259558-27259702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
536-680
               

               
Cow position:
               
chr27:22268445-22268595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
536-681
               

               
Cow position:
               
chr27:4011623-4011774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 0
               
Show alignments to all cow chromosomes.