Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8061H12.3
        

               Conread position:
               6-376
               

               Cow position:
               chr3:84595151-84595520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 21
               

               Conread position:
               311-681
               

               Cow position:
               chr3:7678875-7678505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               12, 60
               

               Conread position:
               325-661
               

               Cow position:
               chr3:83215461-83215117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               233
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               48, 23
               

               Conread position:
               326-673
               

               Cow position:
               chr3:10958048-10958397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               234
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               26, 46
               

               Conread position:
               332-681
               

               Cow position:
               chr3:30462987-30463328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               19, 40
               

               Conread position:
               334-549
               

               Cow position:
               chr3:39812244-39812026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               98, 192
               

               Conread position:
               334-677
               

               Cow position:
               chr3:59474305-59473962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               245, 35
               

               Conread position:
               335-562
               

               Cow position:
               chr3:8813920-8814150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               48, 32
               

               Conread position:
               335-570
               

               Cow position:
               chr3:11229187-11229411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               48, 35
               

               Conread position:
               335-571
               

               Cow position:
               chr3:61466986-61467237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               47, 34
               

               Conread position:
               335-571
               

               Cow position:
               chr3:69785436-69785672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               47, 34
               

               Conread position:
               335-636
               

               Cow position:
               chr3:66631159-66631472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 261
               

               Conread position:
               335-657
               

               Cow position:
               chr3:17058363-17058678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               222
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               238, 35
               

               Conread position:
               335-657
               

               Cow position:
               chr3:76024687-76024381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               220
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               42, 34
               

               Conread position:
               335-680
               

               Cow position:
               chr3:24615658-24615998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               44, 68
               

               Conread position:
               335-681
               

               Cow position:
               chr3:15051768-15052114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               38, 70
               

               Conread position:
               335-681
               

               Cow position:
               chr3:23471279-23471626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               235, 34
               

               Conread position:
               335-681
               

               Cow position:
               chr3:26970995-26970665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               235
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               44, 52
               

               Conread position:
               335-681
               

               Cow position:
               chr3:29813410-29813082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               38, 70
               

               Conread position:
               335-681
               

               Cow position:
               chr3:55124102-55124440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               258
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               235, 9
               

               Conread position:
               336-569
               

               Cow position:
               chr3:59828206-59828438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               44, 8
               

               Conread position:
               336-652
               

               Cow position:
               chr3:79884297-79884614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               37, 71
               

               Conread position:
               336-658
               

               Cow position:
               chr3:21014773-21015101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               47, 30
               

               Conread position:
               336-671
               

               Cow position:
               chr3:75480181-75479850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               229
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               45, 33
               

               Conread position:
               336-677
               

               Cow position:
               chr3:57577882-57577537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               20, 56
               

               Conread position:
               336-680
               

               Cow position:
               chr3:53240448-53240105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               253
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               85, 33
               

               Conread position:
               336-681
               

               Cow position:
               chr3:48810454-48810799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               337-675
               

               Cow position:
               chr3:71231580-71231239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 32
               

               Conread position:
               337-680
               

               Cow position:
               chr3:65237206-65236862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 33
               

               Conread position:
               337-681
               

               Cow position:
               chr3:68587202-68586859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               249
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               12, 34
               

               Conread position:
               338-681
               

               Cow position:
               chr3:75158537-75158197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               339-681
               

               Cow position:
               chr3:58540337-58540691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               252
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               33, 86
               

               Conread position:
               341-681
               

               Cow position:
               chr3:17221955-17222306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               32, 76
               

               Conread position:
               344-583
               

               Cow position:
               chr3:14547174-14546943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               25, 70
               

               Conread position:
               345-679
               

               Cow position:
               chr3:23168894-23169226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               36, 24
               

               Conread position:
               345-681
               

               Cow position:
               chr3:68145681-68146005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               226, 24
               

               Conread position:
               346-569
               

               Cow position:
               chr3:52457082-52456873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               346-681
               

               Cow position:
               chr3:8061293-8060965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               234, 23
               

               Conread position:
               346-681
               

               Cow position:
               chr3:54435141-54434813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               36, 23
               

               Conread position:
               346-681
               

               Cow position:
               chr3:78092338-78092668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 23
               

               Conread position:
               346-684
               

               Cow position:
               chr3:71496956-71497309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               246
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               36, 23
               

               Conread position:
               347-527
               

               Cow position:
               chr3:4086676-4086867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               30, 22
               

               Conread position:
               347-546
               

               Cow position:
               chr3:73589594-73589793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               44, 23
               

               Conread position:
               347-565
               

               Cow position:
               chr3:5305975-5305757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               70, 22
               

               Conread position:
               347-571
               

               Cow position:
               chr3:64010636-64010856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               21, 87
               

               Conread position:
               347-571
               

               Cow position:
               chr3:69650726-69650936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               347-583
               

               Cow position:
               chr3:5040131-5040364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               25, 68
               

               Conread position:
               347-607
               

               Cow position:
               chr3:53703775-53704055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               35, 19
               

               Conread position:
               347-658
               

               Cow position:
               chr3:48900158-48900477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               28, 79
               

               Conread position:
               347-675
               

               Cow position:
               chr3:30222383-30222029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               248
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               32, 22
               

               Conread position:
               347-675
               

               Cow position:
               chr3:54100541-54100879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               347-681
               

               Cow position:
               chr3:45882071-45881747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               32, 22
               

               Conread position:
               347-681
               

               Cow position:
               chr3:77365120-77365461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 25
               

               Conread position:
               347-682
               

               Cow position:
               chr3:57764385-57764064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               235
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               347-684
               

               Cow position:
               chr3:68156899-68156573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               35, 22
               

               Conread position:
               348-571
               

               Cow position:
               chr3:2638104-2637879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 18
               

               Conread position:
               348-571
               

               Cow position:
               chr3:36914241-36914003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               34, 21
               

               Conread position:
               348-624
               

               Cow position:
               chr3:3316637-3316918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               25, 71
               

               Conread position:
               348-639
               

               Cow position:
               chr3:48468347-48468062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               31, 18
               

               Conread position:
               348-650
               

               Cow position:
               chr3:18426529-18426831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               34, 21
               

               Conread position:
               348-652
               

               Cow position:
               chr3:59605013-59604716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 21
               

               Conread position:
               348-657
               

               Cow position:
               chr3:11253994-11254297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               34, 18
               

               Conread position:
               348-658
               

               Cow position:
               chr3:49482543-49482846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               35, 18
               

               Conread position:
               348-660
               

               Cow position:
               chr3:37041587-37041273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               227, 21
               

               Conread position:
               348-663
               

               Cow position:
               chr3:15950746-15951057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               29, 68
               

               Conread position:
               348-665
               

               Cow position:
               chr3:3656686-3656364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               31, 21
               

               Conread position:
               348-671
               

               Cow position:
               chr3:70333798-70334117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               31, 22
               

               Conread position:
               348-673
               

               Cow position:
               chr3:45667172-45667507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               25, 59
               

               Conread position:
               348-675
               

               Cow position:
               chr3:4319890-4319558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               34, 21
               

               Conread position:
               348-675
               

               Cow position:
               chr3:24468213-24468535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               31, 21
               

               Conread position:
               348-675
               

               Cow position:
               chr3:29596566-29596236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               31, 18
               

               Conread position:
               348-675
               

               Cow position:
               chr3:53910277-53909957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               36, 22
               

               Conread position:
               348-675
               

               Cow position:
               chr3:68648348-68648008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               228
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               34, 22
               

               Conread position:
               348-678
               

               Cow position:
               chr3:53790371-53790696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               39, 21
               

               Conread position:
               348-679
               

               Cow position:
               chr3:3556719-3556389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               29, 67
               

               Conread position:
               348-680
               

               Cow position:
               chr3:48363240-48362924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               348-681
               

               Cow position:
               chr3:14553043-14552716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               31, 21
               

               Conread position:
               348-681
               

               Cow position:
               chr3:14601541-14601875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               247
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               170, 18
               

               Conread position:
               348-681
               

               Cow position:
               chr3:27274698-27274369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               34, 21
               

               Conread position:
               348-681
               

               Cow position:
               chr3:31309183-31309517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               31, 21
               

               Conread position:
               348-681
               

               Cow position:
               chr3:54506877-54506547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               223, 21
               

               Conread position:
               348-681
               

               Cow position:
               chr3:54781822-54782179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               250
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               34, 21
               

               Conread position:
               348-681
               

               Cow position:
               chr3:55318727-55319065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               21, 67
               

               Conread position:
               348-681
               

               Cow position:
               chr3:65058870-65058540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 69
               

               Conread position:
               348-681
               

               Cow position:
               chr3:74234352-74234034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               226, 33
               

               Conread position:
               349-609
               

               Cow position:
               chr3:48459159-48459423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               20, 68
               

               Conread position:
               349-630
               

               Cow position:
               chr3:18059874-18059590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               33, 20
               

               Conread position:
               349-645
               

               Cow position:
               chr3:35621491-35621176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               20, 195
               

               Conread position:
               349-650
               

               Cow position:
               chr3:7662027-7661721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               29, 20
               

               Conread position:
               349-675
               

               Cow position:
               chr3:30180253-30179924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               20, 66
               

               Conread position:
               349-675
               

               Cow position:
               chr3:80072313-80071970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               33, 20
               

               Conread position:
               349-681
               

               Cow position:
               chr3:210492-210154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               29, 20
               

               Conread position:
               349-681
               

               Cow position:
               chr3:2392799-2393127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               242
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               33, 20
               

               Conread position:
               349-681
               

               Cow position:
               chr3:62046841-62046500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               243
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               33, 21
               

               Conread position:
               349-681
               

               Cow position:
               chr3:78945652-78945995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               246
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               32, 20
               

               Conread position:
               349-682
               

               Cow position:
               chr3:75570276-75570611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               33, 20
               

               Conread position:
               350-658
               

               Cow position:
               chr3:51033541-51033231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               23, 81
               

               Conread position:
               350-675
               

               Cow position:
               chr3:53318578-53318247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               230
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               30, 5
               

               Conread position:
               350-681
               

               Cow position:
               chr3:11063532-11063220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               10, 21
               

               Conread position:
               350-681
               

               Cow position:
               chr3:13301680-13302011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               32, 16
               

               Conread position:
               350-681
               

               Cow position:
               chr3:67930001-67930344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 148
               

               Conread position:
               352-679
               

               Cow position:
               chr3:48072719-48073034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               31, 18
               

               Conread position:
               368-680
               

               Cow position:
               chr3:53508769-53508460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               18, 42
               

               Conread position:
               372-679
               

               Cow position:
               chr3:26982202-26981904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               218
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               281, 51
               

               Conread position:
               376-667
               

               Cow position:
               chr3:61323474-61323185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               118, 46
               

               Conread position:
               376-681
               

               Cow position:
               chr3:77271138-77271435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 50
               

               Conread position:
               380-681
               

               Cow position:
               chr3:68627551-68627843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               190, 42
               

               Conread position:
               381-571
               

               Cow position:
               chr3:21642131-21641941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               61, 134
               

               Conread position:
               381-571
               

               Cow position:
               chr3:47753372-47753179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               381-606
               

               Cow position:
               chr3:75238595-75238370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               193, 31
               

               Conread position:
               381-627
               

               Cow position:
               chr3:65019722-65019974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               25, 19
               

               Conread position:
               381-646
               

               Cow position:
               chr3:56678212-56678481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               145, 42
               

               Conread position:
               381-652
               

               Cow position:
               chr3:70334557-70334828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               191, 42
               

               Conread position:
               381-657
               

               Cow position:
               chr3:59040705-59040429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               196, 41
               

               Conread position:
               381-658
               

               Cow position:
               chr3:65969309-65969022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               191, 52
               

               Conread position:
               381-658
               

               Cow position:
               chr3:73820227-73820509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               193, 48
               

               Conread position:
               381-661
               

               Cow position:
               chr3:15443591-15443873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               190, 31
               

               Conread position:
               381-671
               

               Cow position:
               chr3:23920291-23920582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               96, 30
               

               Conread position:
               381-674
               

               Cow position:
               chr3:2675167-2674872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               190, 31
               

               Conread position:
               381-675
               

               Cow position:
               chr3:44102102-44101813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               135, 31
               

               Conread position:
               381-675
               

               Cow position:
               chr3:66900591-66900898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               61, 33
               

               Conread position:
               381-675
               

               Cow position:
               chr3:70565599-70565894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               193, 48
               

               Conread position:
               381-675
               

               Cow position:
               chr3:72391223-72390926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               42, 52
               

               Conread position:
               381-677
               

               Cow position:
               chr3:19793455-19793751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               188, 42
               

               Conread position:
               381-678
               

               Cow position:
               chr3:9663034-9663331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               191, 31
               

               Conread position:
               381-680
               

               Cow position:
               chr3:53222147-53221853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               86, 41
               

               Conread position:
               381-681
               

               Cow position:
               chr3:2506341-2506639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 48
               

               Conread position:
               381-681
               

               Cow position:
               chr3:12978480-12978779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               193, 30
               

               Conread position:
               381-681
               

               Cow position:
               chr3:46005880-46006189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               194, 36
               

               Conread position:
               381-681
               

               Cow position:
               chr3:53046523-53046821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               219
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               190, 50
               

               Conread position:
               381-681
               

               Cow position:
               chr3:53270968-53270666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               193, 42
               

               Conread position:
               381-681
               

               Cow position:
               chr3:53875627-53875921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               196, 42
               

               Conread position:
               381-681
               

               Cow position:
               chr3:65413139-65413442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 45
               

               Conread position:
               381-681
               

               Cow position:
               chr3:70761988-70762285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               206
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               184, 21
               

               Conread position:
               381-681
               

               Cow position:
               chr3:74079503-74079801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               190, 31
               

               Conread position:
               381-684
               

               Cow position:
               chr3:76713177-76713491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               27, 49
               

               Conread position:
               382-590
               

               Cow position:
               chr3:64373018-64373224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               184, 18
               

               Conread position:
               382-675
               

               Cow position:
               chr3:49790671-49790967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               188, 55
               

               Conread position:
               385-684
               

               Cow position:
               chr3:75045739-75046043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               90, 35
               

               Conread position:
               386-677
               

               Cow position:
               chr3:63179990-63179702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               56, 16
               

               Conread position:
               386-681
               

               Cow position:
               chr3:16752124-16752415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               56, 27
               

               Conread position:
               388-658
               

               Cow position:
               chr3:71238603-71238334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               119, 53
               

               Conread position:
               388-681
               

               Cow position:
               chr3:1830445-1830731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               186, 24
               

               Conread position:
               388-682
               

               Cow position:
               chr3:28898091-28898386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               182, 23
               

               Conread position:
               391-570
               

               Cow position:
               chr3:56704185-56704367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               396-606
               

               Cow position:
               chr3:53904585-53904377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 63
               

               Conread position:
               396-681
               

               Cow position:
               chr3:9641694-9641403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               111, 16
               

               Conread position:
               396-681
               

               Cow position:
               chr3:55970631-55970343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               178, 19
               

               Conread position:
               400-672
               

               Cow position:
               chr3:3032533-3032251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               42, 124
               

               Conread position:
               405-657
               

               Cow position:
               chr3:8901757-8901505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               17, 106
               

               Conread position:
               405-684
               

               Cow position:
               chr3:23111393-23111664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               38, 15
               

               Conread position:
               406-681
               

               Cow position:
               chr3:59208917-59208652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               17, 63
               

               Conread position:
               407-589
               

               Cow position:
               chr3:28258211-28258030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               176, 59
               

               Conread position:
               407-627
               

               Cow position:
               chr3:55984216-55983986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               35, 91
               

               Conread position:
               407-652
               

               Cow position:
               chr3:84175706-84175959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               407-672
               

               Cow position:
               chr3:17447499-17447762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               160, 30
               

               Conread position:
               407-675
               

               Cow position:
               chr3:35299781-35299509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               163, 24
               

               Conread position:
               407-675
               

               Cow position:
               chr3:61279028-61278752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               20, 67
               

               Conread position:
               407-681
               

               Cow position:
               chr3:5100654-5100929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               407-681
               

               Cow position:
               chr3:13507586-13507304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               35, 226
               

               Conread position:
               407-681
               

               Cow position:
               chr3:66883826-66884103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               7, 109
               

               Conread position:
               407-681
               

               Cow position:
               chr3:70402014-70401740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               200
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               35, 109
               

               Conread position:
               407-681
               

               Cow position:
               chr3:81470980-81471263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               166, 26
               

               Conread position:
               408-652
               

               Cow position:
               chr3:59621533-59621778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               166, 25
               

               Conread position:
               408-675
               

               Cow position:
               chr3:74134821-74134549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               34, 221
               

               Conread position:
               408-677
               

               Cow position:
               chr3:59692005-59691740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               34, 104
               

               Conread position:
               408-681
               

               Cow position:
               chr3:17934822-17935096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               163, 197
               

               Conread position:
               408-681
               

               Cow position:
               chr3:52863070-52863347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               48, 23
               

               Conread position:
               409-582
               

               Cow position:
               chr3:21997670-21997846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               409-606
               

               Cow position:
               chr3:74900527-74900726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 56
               

               Conread position:
               409-664
               

               Cow position:
               chr3:84243658-84243914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               164, 17
               

               Conread position:
               411-681
               

               Cow position:
               chr3:59630399-59630664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               31, 114
               

               Conread position:
               413-681
               

               Cow position:
               chr3:19404408-19404154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               125, 28
               

               Conread position:
               415-639
               

               Cow position:
               chr3:10104150-10103927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               27, 93
               

               Conread position:
               415-665
               

               Cow position:
               chr3:38783717-38783467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               9, 159
               

               Conread position:
               415-673
               

               Cow position:
               chr3:8733251-8733510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               172, 26
               

               Conread position:
               415-675
               

               Cow position:
               chr3:6690110-6689842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               415-675
               

               Cow position:
               chr3:26874699-26874433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               157, 116
               

               Conread position:
               415-681
               

               Cow position:
               chr3:12711805-12712081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               415-681
               

               Cow position:
               chr3:39171374-39171645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               51, 117
               

               Conread position:
               415-681
               

               Cow position:
               chr3:53113285-53113011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               21, 118
               

               Conread position:
               416-675
               

               Cow position:
               chr3:61144201-61143944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               155, 13
               

               Conread position:
               416-675
               

               Cow position:
               chr3:77582214-77581952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               31, 113
               

               Conread position:
               417-675
               

               Cow position:
               chr3:80565073-80564807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               154, 140
               

               Conread position:
               417-681
               

               Cow position:
               chr3:11987437-11987165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               418-681
               

               Cow position:
               chr3:51578219-51578482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               24, 44
               

               Conread position:
               419-675
               

               Cow position:
               chr3:33252783-33253037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               15, 155
               

               Conread position:
               419-681
               

               Cow position:
               chr3:36418378-36418628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               23, 96
               

               Conread position:
               419-681
               

               Cow position:
               chr3:67744523-67744785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 211
               

               Conread position:
               420-570
               

               Cow position:
               chr3:3698760-3698613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               22, 46
               

               Conread position:
               420-605
               

               Cow position:
               chr3:40100613-40100795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               420-657
               

               Cow position:
               chr3:67520060-67520310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               420-658
               

               Cow position:
               chr3:5365781-5365538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               23, 9
               

               Conread position:
               420-658
               

               Cow position:
               chr3:60389866-60389628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               183
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               153, 11
               

               Conread position:
               420-660
               

               Cow position:
               chr3:15228717-15228960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               11, 193
               

               Conread position:
               420-675
               

               Cow position:
               chr3:70896155-70895894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               33, 17
               

               Conread position:
               420-681
               

               Cow position:
               chr3:72536-72252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               420-681
               

               Cow position:
               chr3:6873147-6873406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               15, 95
               

               Conread position:
               420-681
               

               Cow position:
               chr3:18393286-18393550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               19, 95
               

               Conread position:
               420-681
               

               Cow position:
               chr3:25477908-25477654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               21, 52
               

               Conread position:
               420-681
               

               Cow position:
               chr3:58764970-58765239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 246
               

               Conread position:
               420-684
               

               Cow position:
               chr3:24872811-24872550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               11, 96
               

               Conread position:
               420-684
               

               Cow position:
               chr3:29360048-29360305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               157, 13
               

               Conread position:
               421-680
               

               Cow position:
               chr3:35153721-35153460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               23, 199
               

               Conread position:
               422-681
               

               Cow position:
               chr3:76922560-76922825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               20, 130
               

               Conread position:
               423-681
               

               Cow position:
               chr3:22232553-22232814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               143, 105
               

               Conread position:
               427-681
               

               Cow position:
               chr3:7331030-7331275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               19, 53
               

               Conread position:
               427-681
               

               Cow position:
               chr3:52651983-52652237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               77, 207
               

               Conread position:
               427-681
               

               Cow position:
               chr3:54771103-54770847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               15, 27
               

               Conread position:
               427-681
               

               Cow position:
               chr3:58968807-58969063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               141, 16
               

               Conread position:
               427-681
               

               Cow position:
               chr3:73709144-73708886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               192
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               15, 25
               

               Conread position:
               427-682
               

               Cow position:
               chr3:68616234-68616488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               90, 6
               

               Conread position:
               428-671
               

               Cow position:
               chr3:53150428-53150176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               14, 170
               

               Conread position:
               428-679
               

               Cow position:
               chr3:58973391-58973143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               146, 19
               

               Conread position:
               429-546
               

               Cow position:
               chr3:31115175-31115292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               429-634
               

               Cow position:
               chr3:33693915-33693702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               13, 135
               

               Conread position:
               429-647
               

               Cow position:
               chr3:54739791-54740017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               13, 68
               

               Conread position:
               429-675
               

               Cow position:
               chr3:32183926-32184177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               145, 51
               

               Conread position:
               429-681
               

               Cow position:
               chr3:26921004-26920746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               55, 12
               

               Conread position:
               430-673
               

               Cow position:
               chr3:45648224-45647978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               144, 81
               

               Conread position:
               430-675
               

               Cow position:
               chr3:64172533-64172289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               142, 7
               

               Conread position:
               430-678
               

               Cow position:
               chr3:73741777-73742014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               430-680
               

               Cow position:
               chr3:59101922-59101667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               12, 91
               

               Conread position:
               430-681
               

               Cow position:
               chr3:18725551-18725797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               151, 7
               

               Conread position:
               430-681
               

               Cow position:
               chr3:50614734-50614475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               142, 7
               

               Conread position:
               431-548
               

               Cow position:
               chr3:27246866-27246983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               431-571
               

               Cow position:
               chr3:11716090-11715951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               113, 105
               

               Conread position:
               431-607
               

               Cow position:
               chr3:84250450-84250633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               11, 99
               

               Conread position:
               431-622
               

               Cow position:
               chr3:28238479-28238675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               24, 36
               

               Conread position:
               431-629
               

               Cow position:
               chr3:27727738-27727940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               136, 93
               

               Conread position:
               431-648
               

               Cow position:
               chr3:16254747-16254953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               11, 83
               

               Conread position:
               431-655
               

               Cow position:
               chr3:74846616-74846847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               177
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               134, 185
               

               Conread position:
               431-658
               

               Cow position:
               chr3:3889476-3889706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               112, 30
               

               Conread position:
               431-675
               

               Cow position:
               chr3:17895943-17895690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               8, 47
               

               Conread position:
               431-675
               

               Cow position:
               chr3:20841780-20842012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               225, 142
               

               Conread position:
               431-681
               

               Cow position:
               chr3:15655054-15655310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               23, 6
               

               Conread position:
               431-681
               

               Cow position:
               chr3:28908109-28908364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               11, 202
               

               Conread position:
               431-681
               

               Cow position:
               chr3:48296792-48296547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               11, 84
               

               Conread position:
               431-681
               

               Cow position:
               chr3:59883976-59884235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               192
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               431-681
               

               Cow position:
               chr3:68707919-68708166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               10, 96
               

               Conread position:
               431-682
               

               Cow position:
               chr3:66707973-66708235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               10, 32
               

               Conread position:
               431-684
               

               Cow position:
               chr3:55010072-55010331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               139, 107
               

               Conread position:
               431-684
               

               Cow position:
               chr3:76387516-76387764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               132, 20
               

               Conread position:
               432-679
               

               Cow position:
               chr3:23105270-23105526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               432-681
               

               Cow position:
               chr3:13577110-13577348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               432-681
               

               Cow position:
               chr3:73395208-73394958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               186
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               145, 106
               

               Conread position:
               432-682
               

               Cow position:
               chr3:51234004-51234260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               138, 97
               

               Conread position:
               433-664
               

               Cow position:
               chr3:5366859-5366625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               141, 75
               

               Conread position:
               433-673
               

               Cow position:
               chr3:63269313-63269069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               140, 18
               

               Conread position:
               435-576
               

               Cow position:
               chr3:909544-909685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               435-576
               

               Cow position:
               chr3:74787516-74787379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               7, 78
               

               Conread position:
               435-583
               

               Cow position:
               chr3:11292158-11292308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               435-674
               

               Cow position:
               chr3:3985412-3985172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               7, 89
               

               Conread position:
               435-681
               

               Cow position:
               chr3:56059900-56059644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               436-679
               

               Cow position:
               chr3:38828845-38828607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               220, 34
               

               Conread position:
               436-681
               

               Cow position:
               chr3:31771768-31771534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               94, 20
               

               Conread position:
               437-556
               

               Cow position:
               chr3:77276372-77276490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               437-570
               

               Cow position:
               chr3:67959833-67959962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               437-571
               

               Cow position:
               chr3:27976437-27976571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               437-571
               

               Cow position:
               chr3:39247935-39248071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               437-571
               

               Cow position:
               chr3:71423468-71423598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               437-584
               

               Cow position:
               chr3:20515731-20515880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               437-589
               

               Cow position:
               chr3:57877653-57877501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               437-604
               

               Cow position:
               chr3:23667707-23667537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               85, 14
               

               Conread position:
               437-614
               

               Cow position:
               chr3:75777974-75778157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               437-633
               

               Cow position:
               chr3:8349477-8349670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 10
               

               Conread position:
               437-639
               

               Cow position:
               chr3:73299165-73298966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               437-646
               

               Cow position:
               chr3:31225519-31225312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               135, 62
               

               Conread position:
               437-650
               

               Cow position:
               chr3:9074259-9074476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               17, 28
               

               Conread position:
               437-651
               

               Cow position:
               chr3:22510112-22509894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               134, 43
               

               Conread position:
               437-656
               

               Cow position:
               chr3:61116766-61116995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               437-657
               

               Cow position:
               chr3:32457280-32457062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               437-658
               

               Cow position:
               chr3:17235130-17235348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               93, 37
               

               Conread position:
               437-659
               

               Cow position:
               chr3:3649137-3649356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               135, 102
               

               Conread position:
               437-659
               

               Cow position:
               chr3:58527469-58527261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               437-671
               

               Cow position:
               chr3:55271958-55272199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               437-673
               

               Cow position:
               chr3:23408271-23408506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               142, 77
               

               Conread position:
               437-673
               

               Cow position:
               chr3:79645343-79645598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               47, 205
               

               Conread position:
               437-675
               

               Cow position:
               chr3:15153778-15153536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               437-675
               

               Cow position:
               chr3:17134421-17134181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               134, 162
               

               Conread position:
               437-675
               

               Cow position:
               chr3:46901284-46901040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               107, 19
               

               Conread position:
               437-675
               

               Cow position:
               chr3:66292089-66292333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               137, 167
               

               Conread position:
               437-675
               

               Cow position:
               chr3:76267888-76268138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               437-677
               

               Cow position:
               chr3:24935451-24935212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 19
               

               Conread position:
               437-679
               

               Cow position:
               chr3:26960501-26960751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               117, 122
               

               Conread position:
               437-679
               

               Cow position:
               chr3:48241701-48241456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               137, 83
               

               Conread position:
               437-679
               

               Cow position:
               chr3:75080847-75080610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               137, 19
               

               Conread position:
               437-680
               

               Cow position:
               chr3:18686993-18686746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               437-680
               

               Cow position:
               chr3:59597265-59597022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               142, 118
               

               Conread position:
               437-680
               

               Cow position:
               chr3:60264629-60264876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               136, 188
               

               Conread position:
               437-681
               

               Cow position:
               chr3:2680600-2680354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               135, 70
               

               Conread position:
               437-681
               

               Cow position:
               chr3:3738568-3738326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               146, 72
               

               Conread position:
               437-681
               

               Cow position:
               chr3:12255565-12255316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               135, 47
               

               Conread position:
               437-681
               

               Cow position:
               chr3:15506535-15506289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               134, 69
               

               Conread position:
               437-681
               

               Cow position:
               chr3:18459441-18459684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               217, 124
               

               Conread position:
               437-681
               

               Cow position:
               chr3:20677755-20677997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               123, 76
               

               Conread position:
               437-681
               

               Cow position:
               chr3:23877087-23876832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               84, 44
               

               Conread position:
               437-681
               

               Cow position:
               chr3:24352947-24352698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               135, 73
               

               Conread position:
               437-681
               

               Cow position:
               chr3:27532568-27532820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               128, 46
               

               Conread position:
               437-681
               

               Cow position:
               chr3:27940056-27940290 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               146, 83
               

               Conread position:
               437-681
               

               Cow position:
               chr3:32585237-32584991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               139, 184
               

               Conread position:
               437-681
               

               Cow position:
               chr3:34271001-34270749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               38, 84
               

               Conread position:
               437-681
               

               Cow position:
               chr3:48252972-48252721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               129, 163
               

               Conread position:
               437-681
               

               Cow position:
               chr3:49650475-49650223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               437-681
               

               Cow position:
               chr3:50768766-50768520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               134, 155
               

               Conread position:
               437-681
               

               Cow position:
               chr3:52608269-52608025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               160, 136
               

               Conread position:
               437-681
               

               Cow position:
               chr3:53588297-53588549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               13, 25
               

               Conread position:
               437-681
               

               Cow position:
               chr3:54340335-54340572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               17, 25
               

               Conread position:
               437-681
               

               Cow position:
               chr3:54946218-54945966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               437-681
               

               Cow position:
               chr3:56476769-56476518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               134, 190
               

               Conread position:
               437-681
               

               Cow position:
               chr3:57760585-57760336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               437-681
               

               Cow position:
               chr3:58767350-58767107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               153, 136
               

               Conread position:
               437-681
               

               Cow position:
               chr3:60265167-60265404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               187, 76
               

               Conread position:
               437-681
               

               Cow position:
               chr3:64280844-64281094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               185
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               94, 19
               

               Conread position:
               437-681
               

               Cow position:
               chr3:71238240-71237994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               38, 33
               

               Conread position:
               437-681
               

               Cow position:
               chr3:79292915-79292667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               135, 72
               

               Conread position:
               437-681
               

               Cow position:
               chr3:80053456-80053706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               131, 24
               

               Conread position:
               437-681
               

               Cow position:
               chr3:80581742-80581501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               190
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               137, 77
               

               Conread position:
               437-681
               

               Cow position:
               chr3:82461266-82461015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               437-681
               

               Cow position:
               chr3:84596878-84597122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               115, 44
               

               Conread position:
               437-682
               

               Cow position:
               chr3:13329699-13329941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               134, 59
               

               Conread position:
               437-684
               

               Cow position:
               chr3:38691319-38691574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               437-684
               

               Cow position:
               chr3:49383036-49382783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               119, 188
               

               Conread position:
               438-675
               

               Cow position:
               chr3:8393431-8393194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               136, 44
               

               Conread position:
               438-675
               

               Cow position:
               chr3:34669647-34669884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               133, 100
               

               Conread position:
               438-675
               

               Cow position:
               chr3:38347276-38347045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               215, 75
               

               Conread position:
               438-681
               

               Cow position:
               chr3:35852384-35852626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               6, 184
               

               Conread position:
               438-681
               

               Cow position:
               chr3:57274147-57273904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               61, 84
               

               Conread position:
               438-681
               

               Cow position:
               chr3:57624550-57624301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               187
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               132, 209
               

               Conread position:
               440-605
               

               Cow position:
               chr3:81234473-81234310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               440-674
               

               Cow position:
               chr3:5374412-5374179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               181
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               133, 80
               

               Conread position:
               440-679
               

               Cow position:
               chr3:5097291-5097043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               440-681
               

               Cow position:
               chr3:26066085-26065841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               27, 90
               

               Conread position:
               440-681
               

               Cow position:
               chr3:53739101-53739348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               440-681
               

               Cow position:
               chr3:59799332-59799085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               440-681
               

               Cow position:
               chr3:68881038-68881274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               134, 21
               

               Conread position:
               441-571
               

               Cow position:
               chr3:11606403-11606267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               441-658
               

               Cow position:
               chr3:82056036-82056248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               124, 79
               

               Conread position:
               441-663
               

               Cow position:
               chr3:20993896-20993667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               131, 112
               

               Conread position:
               441-675
               

               Cow position:
               chr3:83491168-83490927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               133, 45
               

               Conread position:
               441-681
               

               Cow position:
               chr3:4050276-4050030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               130, 104
               

               Conread position:
               441-681
               

               Cow position:
               chr3:14626067-14626320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               441-681
               

               Cow position:
               chr3:73764117-73764358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               132, 61
               

               Conread position:
               441-681
               

               Cow position:
               chr3:74502242-74502484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               213, 0
               

               Conread position:
               441-684
               

               Cow position:
               chr3:8394025-8393771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               192
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               442-658
               

               Cow position:
               chr3:1517430-1517653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               128, 160
               

               Conread position:
               442-680
               

               Cow position:
               chr3:72503814-72504061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               130, 203
               

               Conread position:
               443-668
               

               Cow position:
               chr3:79196840-79196610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               443-671
               

               Cow position:
               chr3:55177665-55177905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               443-673
               

               Cow position:
               chr3:55109532-55109771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               443-679
               

               Cow position:
               chr3:62826538-62826779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               80, 56
               

               Conread position:
               443-681
               

               Cow position:
               chr3:11712046-11711795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               140, 130
               

               Conread position:
               443-681
               

               Cow position:
               chr3:26218972-26219212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               124, 8
               

               Conread position:
               443-681
               

               Cow position:
               chr3:45647761-45647518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               125, 183
               

               Conread position:
               443-681
               

               Cow position:
               chr3:55085088-55085345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               443-681
               

               Cow position:
               chr3:55835740-55835987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               443-681
               

               Cow position:
               chr3:67704627-67704380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               128, 0
               

               Conread position:
               444-672
               

               Cow position:
               chr3:46541749-46541981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               126, 157
               

               Conread position:
               444-681
               

               Cow position:
               chr3:2198962-2198720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               30, 39
               

               Conread position:
               444-681
               

               Cow position:
               chr3:31850297-31850532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               128, 70
               

               Conread position:
               444-681
               

               Cow position:
               chr3:61840355-61840115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               135, 76
               

               Conread position:
               444-681
               

               Cow position:
               chr3:72676171-72675930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               445-658
               

               Cow position:
               chr3:80468599-80468814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               126, 41
               

               Conread position:
               445-681
               

               Cow position:
               chr3:56298-56537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               87, 70
               

               Conread position:
               446-583
               

               Cow position:
               chr3:81277390-81277528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               447-681
               

               Cow position:
               chr3:49218226-49218476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               447-681
               

               Cow position:
               chr3:71430127-71430370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               449-681
               

               Cow position:
               chr3:3638253-3638024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               179
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               124, 65
               

               Conread position:
               449-681
               

               Cow position:
               chr3:37452142-37451904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               121, 12
               

               Conread position:
               450-681
               

               Cow position:
               chr3:10896897-10896670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               5, 124
               

               Conread position:
               451-681
               

               Cow position:
               chr3:75711379-75711149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               125, 137
               

               Conread position:
               453-678
               

               Cow position:
               chr3:84199747-84199520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               106, 100
               

               Conread position:
               454-681
               

               Cow position:
               chr3:4036015-4036239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               77, 115
               

               Conread position:
               454-681
               

               Cow position:
               chr3:12287292-12287073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               134, 40
               

               Conread position:
               455-681
               

               Cow position:
               chr3:49139980-49140204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               119, 79
               

               Conread position:
               456-681
               

               Cow position:
               chr3:26553647-26553878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               456-684
               

               Cow position:
               chr3:76015360-76015125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               114, 145
               

               Conread position:
               457-668
               

               Cow position:
               chr3:78896714-78896499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               114, 156
               

               Conread position:
               460-681
               

               Cow position:
               chr3:23091912-23092141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               109, 24
               

               Conread position:
               460-681
               

               Cow position:
               chr3:29507646-29507434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               133, 115
               

               Conread position:
               460-681
               

               Cow position:
               chr3:73759453-73759678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               114, 51
               

               Conread position:
               464-681
               

               Cow position:
               chr3:12674983-12675197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               192, 109
               

               Conread position:
               464-681
               

               Cow position:
               chr3:20437596-20437812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               172
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 161
               

               Conread position:
               464-681
               

               Cow position:
               chr3:27696919-27697141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               110, 6
               

               Conread position:
               464-681
               

               Cow position:
               chr3:42480678-42480459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               101, 19
               

               Conread position:
               465-658
               

               Cow position:
               chr3:81359048-81359244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               106, 136
               

               Conread position:
               465-675
               

               Cow position:
               chr3:72019175-72018959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               123, 49
               

               Conread position:
               466-681
               

               Cow position:
               chr3:74878531-74878754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               468-680
               

               Cow position:
               chr3:34937900-34937682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               104, 69
               

               Conread position:
               470-681
               

               Cow position:
               chr3:66609790-66610005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               104, 59
               

               Conread position:
               474-674
               

               Cow position:
               chr3:22089227-22089434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               25, 29
               

               Conread position:
               474-681
               

               Cow position:
               chr3:65800635-65800433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               97, 40
               

               Conread position:
               475-681
               

               Cow position:
               chr3:31046903-31047113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               97, 33
               

               Conread position:
               475-681
               

               Cow position:
               chr3:75687388-75687601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               479-682
               

               Cow position:
               chr3:19708063-19708268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               93, 41
               

               Conread position:
               480-675
               

               Cow position:
               chr3:22820615-22820412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               92, 25
               

               Conread position:
               481-674
               

               Cow position:
               chr3:42178196-42178001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               93, 33
               

               Conread position:
               481-681
               

               Cow position:
               chr3:37186870-37186668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               97, 92
               

               Conread position:
               481-681
               

               Cow position:
               chr3:83921227-83921040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               78, 34
               

               Conread position:
               481-682
               

               Cow position:
               chr3:14632940-14633147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               97, 166
               

               Conread position:
               482-664
               

               Cow position:
               chr3:43727121-43726931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               96, 160
               

               Conread position:
               482-681
               

               Cow position:
               chr3:54373818-54374022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               491-684
               

               Cow position:
               chr3:35005809-35005615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               86, 165
               

               Conread position:
               496-681
               

               Cow position:
               chr3:15992746-15992552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               497-675
               

               Cow position:
               chr3:69849484-69849662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               79, 17
               

               Conread position:
               498-681
               

               Cow position:
               chr3:55106413-55106601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               505-684
               

               Cow position:
               chr3:39328419-39328229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               506-681
               

               Cow position:
               chr3:29807481-29807303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               50, 22
               

               Conread position:
               506-681
               

               Cow position:
               chr3:83201506-83201686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               6, 99
               

               Conread position:
               507-682
               

               Cow position:
               chr3:52650510-52650694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               517-681
               

               Cow position:
               chr3:59515111-59514943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               53, 85
               

               Conread position:
               519-684
               

               Cow position:
               chr3:77729461-77729287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               55, 136
               

               Conread position:
               524-675
               

               Cow position:
               chr3:9843587-9843431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               53, 91
               

               Conread position:
               524-681
               

               Cow position:
               chr3:15859666-15859829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               50, 124
               

               Conread position:
               527-673
               

               Cow position:
               chr3:18056436-18056289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               54, 35
               

               Conread position:
               530-658
               

               Cow position:
               chr3:15790549-15790421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 90
               

               Conread position:
               530-678
               

               Cow position:
               chr3:44622892-44623044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               533-664
               

               Cow position:
               chr3:51506963-51506831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               97, 129
               

               Conread position:
               533-675
               

               Cow position:
               chr3:53192435-53192578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               39, 75
               

               Conread position:
               536-683
               

               Cow position:
               chr3:27247201-27247353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               38, 145
               

               Conread position:
               543-681
               

               Cow position:
               chr3:8604037-8604176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               43, 0
               
Show alignments to all cow chromosomes.
Conread position:	6-376
Cow position:	chr3:84595151-84595520 (view UCSC Genome Browser custom track)
Alignm length:	377
Alignm identity:	285
Alignm E-value:	0
Alignm gaps (pig, cow):	103, 21
Conread position:	311-681
Cow position:	chr3:7678875-7678505 (view UCSC Genome Browser custom track)
Alignm length:	383
Alignm identity:	250
Alignm E-value:	4e-29
Alignm gaps (pig, cow):	12, 60
Conread position:	325-661
Cow position:	chr3:83215461-83215117 (view UCSC Genome Browser custom track)
Alignm length:	348
Alignm identity:	233
Alignm E-value:	9e-36
Alignm gaps (pig, cow):	48, 23
Conread position:	326-673
Cow position:	chr3:10958048-10958397 (view UCSC Genome Browser custom track)
Alignm length:	360
Alignm identity:	234
Alignm E-value:	9e-26
Alignm gaps (pig, cow):	26, 46
Conread position:	332-681
Cow position:	chr3:30462987-30463328 (view UCSC Genome Browser custom track)
Alignm length:	360
Alignm identity:	242
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	19, 40
Conread position:	334-549
Cow position:	chr3:39812244-39812026 (view UCSC Genome Browser custom track)
Alignm length:	223
Alignm identity:	153
Alignm E-value:	7e-23
Alignm gaps (pig, cow):	98, 192
Conread position:	334-677
Cow position:	chr3:59474305-59473962 (view UCSC Genome Browser custom track)
Alignm length:	352
Alignm identity:	250
Alignm E-value:	0
Alignm gaps (pig, cow):	245, 35
Conread position:	335-562
Cow position:	chr3:8813920-8814150 (view UCSC Genome Browser custom track)
Alignm length:	233
Alignm identity:	169
Alignm E-value:	2e-34
Alignm gaps (pig, cow):	48, 32
Conread position:	335-570
Cow position:	chr3:11229187-11229411 (view UCSC Genome Browser custom track)
Alignm length:	237
Alignm identity:	169
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	48, 35
Conread position:	335-571
Cow position:	chr3:61466986-61467237 (view UCSC Genome Browser custom track)
Alignm length:	253
Alignm identity:	181
Alignm E-value:	6e-32
Alignm gaps (pig, cow):	47, 34
Conread position:	335-636
Cow position:	chr3:66631159-66631472 (view UCSC Genome Browser custom track)
Alignm length:	316
Alignm identity:	203
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	34, 261
Conread position:	335-657
Cow position:	chr3:17058363-17058678 (view UCSC Genome Browser custom track)
Alignm length:	326
Alignm identity:	222
Alignm E-value:	9e-36
Alignm gaps (pig, cow):	238, 35
Conread position:	335-680
Cow position:	chr3:24615658-24615998 (view UCSC Genome Browser custom track)
Alignm length:	352
Alignm identity:	228
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	44, 68
Conread position:	335-681
Cow position:	chr3:15051768-15052114 (view UCSC Genome Browser custom track)
Alignm length:	360
Alignm identity:	249
Alignm E-value:	1e-38
Alignm gaps (pig, cow):	38, 70
Conread position:	336-569
Cow position:	chr3:59828206-59828438 (view UCSC Genome Browser custom track)
Alignm length:	238
Alignm identity:	165
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	44, 8
Conread position:	336-652
Cow position:	chr3:79884297-79884614 (view UCSC Genome Browser custom track)
Alignm length:	327
Alignm identity:	214
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	37, 71
Conread position:	336-658
Cow position:	chr3:21014773-21015101 (view UCSC Genome Browser custom track)
Alignm length:	335
Alignm identity:	223
Alignm E-value:	5e-30
Alignm gaps (pig, cow):	47, 30
Conread position:	336-671
Cow position:	chr3:75480181-75479850 (view UCSC Genome Browser custom track)
Alignm length:	347
Alignm identity:	229
Alignm E-value:	9e-26
Alignm gaps (pig, cow):	45, 33
Conread position:	336-677
Cow position:	chr3:57577882-57577537 (view UCSC Genome Browser custom track)
Alignm length:	357
Alignm identity:	240
Alignm E-value:	5e-30
Alignm gaps (pig, cow):	20, 56
Conread position:	336-680
Cow position:	chr3:53240448-53240105 (view UCSC Genome Browser custom track)
Alignm length:	365
Alignm identity:	253
Alignm E-value:	4e-29
Alignm gaps (pig, cow):	85, 33